association	dataset	threshold value	standardized value
NOMO1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.59977
deregulation	GeneRIF Biological Term Annotations	1.0	null
cardiomyocytes	GeneRIF Biological Term Annotations	1.0	null
19924232-TableS1	GeneSigDB Published Gene Signatures	1.0	null
death	GeneRIF Biological Term Annotations	1.0	null
NCI-H187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.926466
tumorigenesis	GeneRIF Biological Term Annotations	1.0	null
NCIH524	CCLE Cell Line Gene CNV Profiles	-1.0	-1.5394
SU.86.86	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.927271
mediated	GeneRIF Biological Term Annotations	1.0	null
Necrosis	CTD Gene-Disease Associations	1.0	1.07269
used	GeneRIF Biological Term Annotations	1.0	null
stressinduced	GeneRIF Biological Term Annotations	1.0	null
BC3C	CCLE Cell Line Gene CNV Profiles	1.0	1.55365
hippocampus	GeneRIF Biological Term Annotations	1.0	null
BICR18	CCLE Cell Line Gene CNV Profiles	-1.0	-1.92639
protect	GeneRIF Biological Term Annotations	1.0	null
metastasis	GeneRIF Biological Term Annotations	1.0	null
intrahepatic	GeneRIF Biological Term Annotations	1.0	null
situation	GeneRIF Biological Term Annotations	1.0	null
elongation	GeneRIF Biological Term Annotations	1.0	null
YY1	MotifMap Predicted Transcription Factor Targets	1.0	null
endothelial	GeneRIF Biological Term Annotations	1.0	null
lc3b	GeneRIF Biological Term Annotations	1.0	null
MKN-45	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.38706
MDA-MB-415	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.927271
BICR 78	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.29585
DU 145	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.80519
part	GeneRIF Biological Term Annotations	1.0	null
Prenatal Exposure Delayed Effects	CTD Gene-Disease Associations	1.0	1.48736
CAR-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.60851
MYC_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SNU1196	CCLE Cell Line Gene CNV Profiles	1.0	1.34913
STAT3-18555785-MESC-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
healthy	GeneRIF Biological Term Annotations	1.0	null
loss	GeneRIF Biological Term Annotations	1.0	null
NCIH2228	CCLE Cell Line Gene CNV Profiles	1.0	1.76124
LOX-IMVI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.902356
NCI-H1581	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.991157
among	GeneRIF Biological Term Annotations	1.0	null
JURLMK1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44264
mcl1	GeneRIF Biological Term Annotations	1.0	null
present	GeneRIF Biological Term Annotations	1.0	null
Cardiovascular Diseases	CTD Gene-Disease Associations	1.0	1.01025
EP300	ENCODE Transcription Factor Targets	1.0	null
A-427	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.976725
triptolide	GeneRIF Biological Term Annotations	1.0	null
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.926466
mir2045p	GeneRIF Biological Term Annotations	1.0	null
vitro	GeneRIF Biological Term Annotations	1.0	null
sheath	GeneRIF Biological Term Annotations	1.0	null
SMARCA4	ChEA Transcription Factor Targets	1.0	null
influence	GeneRIF Biological Term Annotations	1.0	null
pathways	GeneRIF Biological Term Annotations	1.0	null
hippocampal	GeneRIF Biological Term Annotations	1.0	null
U-698-M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.72851
G96	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04275
carcinomas	GeneRIF Biological Term Annotations	1.0	null
microdeletion	GeneRIF Biological Term Annotations	1.0	null
mechanisms	GeneRIF Biological Term Annotations	1.0	null
direct	GeneRIF Biological Term Annotations	1.0	null
meshwork	GeneRIF Biological Term Annotations	1.0	null
SUZ12	ENCODE Transcription Factor Targets	1.0	null
neural	GeneRIF Biological Term Annotations	1.0	null
schwann	GeneRIF Biological Term Annotations	1.0	null
increase	GeneRIF Biological Term Annotations	1.0	null
vhlregulated	GeneRIF Biological Term Annotations	1.0	null
Hypertension	CTD Gene-Disease Associations	1.0	1.15831
indirectly	GeneRIF Biological Term Annotations	1.0	null
CHD1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KARPAS-620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.861503
KO52	CCLE Cell Line Gene CNV Profiles	-1.0	-1.80257
PAX2	JASPAR Predicted Transcription Factor Targets	1.0	null
CHD1	ENCODE Transcription Factor Targets	1.0	null
involvement	GeneRIF Biological Term Annotations	1.0	null
sclerosis	GeneRIF Biological Term Annotations	1.0	null
dedifferentiation	GeneRIF Biological Term Annotations	1.0	null
COLO 699	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.976725
meis1	GeneRIF Biological Term Annotations	1.0	null
CHK2_KD_GSE54268_667_human_MCF-10A	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
SNU387	CCLE Cell Line Gene CNV Profiles	1.0	1.38686
SNU489	CCLE Cell Line Gene CNV Profiles	1.0	1.48252
TE8	CCLE Cell Line Gene CNV Profiles	1.0	1.56509
SCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13626
OE19	CCLE Cell Line Gene CNV Profiles	1.0	1.45958
LXF-289	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.971981
DB	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02544
population	GeneRIF Biological Term Annotations	1.0	null
H3K9ac_fibroblast of dermis_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
maintaining	GeneRIF Biological Term Annotations	1.0	null
regulatory	GeneRIF Biological Term Annotations	1.0	null
foxc1	GeneRIF Biological Term Annotations	1.0	null
negative	GeneRIF Biological Term Annotations	1.0	null
NCI-H446	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08249
OCI-LY-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.903461
statistically	GeneRIF Biological Term Annotations	1.0	null
POLR2A_H54_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MEL-HO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.902356
FADU	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.86073
proliferation	GeneRIF Biological Term Annotations	1.0	null
key	GeneRIF Biological Term Annotations	1.0	null
demonstrate	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
itgbeta1	GeneRIF Biological Term Annotations	1.0	null
related	GeneRIF Biological Term Annotations	1.0	null
underlying	GeneRIF Biological Term Annotations	1.0	null
lc3ii	GeneRIF Biological Term Annotations	1.0	null
against	GeneRIF Biological Term Annotations	1.0	null
containing	GeneRIF Biological Term Annotations	1.0	null
HCC1569	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.976725
PPARD-21283829-MYOFIBROBLAST-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
ETS2	MotifMap Predicted Transcription Factor Targets	1.0	null
CMK86	CCLE Cell Line Gene CNV Profiles	-1.0	-1.51024
downregulated	GeneRIF Biological Term Annotations	1.0	null
H3K27me3_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Inflammation	CTD Gene-Disease Associations	1.0	1.41586
EJM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21338
genomic	GeneRIF Biological Term Annotations	1.0	null
hypothesis	GeneRIF Biological Term Annotations	1.0	null
CTCF	ENCODE Transcription Factor Targets	1.0	null
involving	GeneRIF Biological Term Annotations	1.0	null
hypertension	GeneRIF Biological Term Annotations	1.0	null
Neuro D	MotifMap Predicted Transcription Factor Targets	1.0	null
Ovarian Neoplasms	CTD Gene-Disease Associations	1.0	1.05757
KELLY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.65334
directly	GeneRIF Biological Term Annotations	1.0	null
lower	GeneRIF Biological Term Annotations	1.0	null
HEY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.938241
EOL1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.45503
EZH2_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
GTL-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.976725
ME-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.71761
COLO 853	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.960332
15284443-Table6	GeneSigDB Published Gene Signatures	1.0	null
PPARD	ChEA Transcription Factor Targets	1.0	null
G44	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11307
mir204pdef	GeneRIF Biological Term Annotations	1.0	null
invasion	GeneRIF Biological Term Annotations	1.0	null
NCI-H2009	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.959238
HBL-100	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.902356
HCC1011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.861503
differentiation	GeneRIF Biological Term Annotations	1.0	null
NUGC4	CCLE Cell Line Gene CNV Profiles	1.0	2.48141
NCI-H1573	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.88228
18308931-Table3	GeneSigDB Published Gene Signatures	1.0	null
EPLC-272H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.903461
promoting	GeneRIF Biological Term Annotations	1.0	null
DMS 79	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.17894
SW 948	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21338
Nerve Degeneration	CTD Gene-Disease Associations	1.0	1.09366
caused	GeneRIF Biological Term Annotations	1.0	null
temporal	GeneRIF Biological Term Annotations	1.0	null
repression	GeneRIF Biological Term Annotations	1.0	null
cdc42	GeneRIF Biological Term Annotations	1.0	null
SCC-25	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.34045
H3K27me3_G1E-ER4_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
epilepsy	GeneRIF Biological Term Annotations	1.0	null
SPI1	ENCODE Transcription Factor Targets	1.0	null
NCIH2085	CCLE Cell Line Gene CNV Profiles	-1.0	-1.83523
promotes	GeneRIF Biological Term Annotations	1.0	null
mir204	GeneRIF Biological Term Annotations	1.0	null
downregulation	GeneRIF Biological Term Annotations	1.0	null
pancreatic	GeneRIF Biological Term Annotations	1.0	null
MKN-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.976725
KYSE-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13211
barrier	GeneRIF Biological Term Annotations	1.0	null
SKCO1	CCLE Cell Line Gene CNV Profiles	1.0	3.23458
MKN-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04275
hfrpe	GeneRIF Biological Term Annotations	1.0	null
regulating	GeneRIF Biological Term Annotations	1.0	null
SW1990	CCLE Cell Line Gene CNV Profiles	-1.0	-1.78487
decreased	GeneRIF Biological Term Annotations	1.0	null
MG-63	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02621
Prenatal Injuries	CTD Gene-Disease Associations	1.0	1.35213
NCI-H2803	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.27163
contribute	GeneRIF Biological Term Annotations	1.0	null
mesenchymal	GeneRIF Biological Term Annotations	1.0	null
H3K27me3_G1E-ER4_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
transition	GeneRIF Biological Term Annotations	1.0	null
adhesion	GeneRIF Biological Term Annotations	1.0	null
thus	GeneRIF Biological Term Annotations	1.0	null
Proteinuria	CTD Gene-Disease Associations	1.0	1.14302
YY1	JASPAR Predicted Transcription Factor Targets	1.0	null
pyrazinamide_mus musculus_gpl6246_gse48027	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
HMY-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.42283
G130	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.51092
COLO 320DM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.873671
JUND_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
linked	GeneRIF Biological Term Annotations	1.0	null
existence	GeneRIF Biological Term Annotations	1.0	null
SF767	CCLE Cell Line Gene CNV Profiles	1.0	1.74579
STAT3	ChEA Transcription Factor Targets	1.0	null
F36P	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35649
pulmonary	GeneRIF Biological Term Annotations	1.0	null
acts	GeneRIF Biological Term Annotations	1.0	null
20485376-TableS4	GeneSigDB Published Gene Signatures	1.0	null
BICR22	CCLE Cell Line Gene CNV Profiles	1.0	1.35143
blocking	GeneRIF Biological Term Annotations	1.0	null
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.971981
POLR2A	ENCODE Transcription Factor Targets	1.0	null
crucial	GeneRIF Biological Term Annotations	1.0	null
SW1116	CCLE Cell Line Gene CNV Profiles	-1.0	-2.07524
uncovers	GeneRIF Biological Term Annotations	1.0	null
lobe	GeneRIF Biological Term Annotations	1.0	null
HK2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.92572
bcl2	GeneRIF Biological Term Annotations	1.0	null
causes	GeneRIF Biological Term Annotations	1.0	null
CMK115	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39148
gradeinvasive	GeneRIF Biological Term Annotations	1.0	null
molecular	GeneRIF Biological Term Annotations	1.0	null
resultant	GeneRIF Biological Term Annotations	1.0	null
microrna	GeneRIF Biological Term Annotations	1.0	null
SNU1076	CCLE Cell Line Gene CNV Profiles	1.0	2.04065
K-562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.976725
dedifferentiated	GeneRIF Biological Term Annotations	1.0	null
mir205	GeneRIF Biological Term Annotations	1.0	null
HCC4011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.1075
pathogenesis	GeneRIF Biological Term Annotations	1.0	null
H3K27me3_G1E-ER4_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SPI1_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
suppressing	GeneRIF Biological Term Annotations	1.0	null
NR3C1	ChEA Transcription Factor Targets	1.0	null
H3K4me1_mononuclear cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
SW 1116	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.0166
albuminuria	MGI Mouse Phenotype Associations 2023	1.0	null
binds	GeneRIF Biological Term Annotations	1.0	null
identify	GeneRIF Biological Term Annotations	1.0	null
EP300_GM12878_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ME-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.60108
releases	GeneRIF Biological Term Annotations	1.0	null
mitf	GeneRIF Biological Term Annotations	1.0	null
EZH2_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ES-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.909961
cataract	IMPC Knockout Mouse Phenotypes	1.0	null
pivotal	GeneRIF Biological Term Annotations	1.0	null
GR-M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.51092
Neoplasms	CTD Gene-Disease Associations	1.0	1.22727
NCI-H522	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.950562
MORCPR	CCLE Cell Line Gene CNV Profiles	1.0	1.36657
NCI-H2452	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.17894
BV173	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35498
caveolin	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_GM12878_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
posttranscriptional	GeneRIF Biological Term Annotations	1.0	null
BICR16	CCLE Cell Line Gene CNV Profiles	1.0	1.4033
ME1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.62898
IGR39	CCLE Cell Line Gene CNV Profiles	1.0	1.81178
arterial	GeneRIF Biological Term Annotations	1.0	null
suppressor	GeneRIF Biological Term Annotations	1.0	null
lung	GeneRIF Biological Term Annotations	1.0	null
tissues	GeneRIF Biological Term Annotations	1.0	null
EFO27	CCLE Cell Line Gene CNV Profiles	1.0	1.50941
ankrd13a	GeneRIF Biological Term Annotations	1.0	null
CTCF_GM06990_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
COR-L279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22645
HOS	CCLE Cell Line Gene CNV Profiles	1.0	1.83136
OAW42	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.48023
macroautophagy	GeneRIF Biological Term Annotations	1.0	null
fn1	GeneRIF Biological Term Annotations	1.0	null
JHOS4	CCLE Cell Line Gene CNV Profiles	-1.0	-2.4642
CHD1_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
point	GeneRIF Biological Term Annotations	1.0	null
all	GeneRIF Biological Term Annotations	1.0	null
support	GeneRIF Biological Term Annotations	1.0	null
HCC630	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.4518
CFPAC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08329
NUGC2	CCLE Cell Line Gene CNV Profiles	1.0	1.50104
regulator	GeneRIF Biological Term Annotations	1.0	null
KELLY	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35263
stimulus	GeneRIF Biological Term Annotations	1.0	null
SUZ12_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
trabecular	GeneRIF Biological Term Annotations	1.0	null
phenotypes	GeneRIF Biological Term Annotations	1.0	null
COLO 857	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02904
slug	GeneRIF Biological Term Annotations	1.0	null
20485376-TableS3	GeneSigDB Published Gene Signatures	1.0	null
FOXC1	JASPAR Predicted Transcription Factor Targets	1.0	null
nephroblastomas	GeneRIF Biological Term Annotations	1.0	null
meis2	GeneRIF Biological Term Annotations	1.0	null
aberrant	GeneRIF Biological Term Annotations	1.0	null
EFO-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.56074
lens	GeneRIF Biological Term Annotations	1.0	null
SNU620	CCLE Cell Line Gene CNV Profiles	1.0	1.60189
von	GeneRIF Biological Term Annotations	1.0	null
mesial	GeneRIF Biological Term Annotations	1.0	null
apoptosis	GeneRIF Biological Term Annotations	1.0	null
20068076-SuppTable4	GeneSigDB Published Gene Signatures	1.0	null
abnormal renal arterial blood pressure regulation	MGI Mouse Phenotype Associations 2023	1.0	null
TM31	CCLE Cell Line Gene CNV Profiles	1.0	1.3897
fate	GeneRIF Biological Term Annotations	1.0	null
Fetal Growth Retardation	CTD Gene-Disease Associations	1.0	1.03009
abnormal kidney interlobular artery morphology	MGI Mouse Phenotype Associations 2023	1.0	null
Neurotoxicity Syndromes	CTD Gene-Disease Associations	1.0	1.21695
ME-180	COSMIC Cell Line Gene CNV Profiles	1.0	2.15316
Weight Loss	CTD Gene-Disease Associations	1.0	1.01512
oncogenic	GeneRIF Biological Term Annotations	1.0	null
MEWO	CCLE Cell Line Gene CNV Profiles	-1.0	-1.4124
investigated	GeneRIF Biological Term Annotations	1.0	null
mir204211	GeneRIF Biological Term Annotations	1.0	null
CACO2	CCLE Cell Line Gene CNV Profiles	-1.0	-2.4258
malignant	GeneRIF Biological Term Annotations	1.0	null
axis	GeneRIF Biological Term Annotations	1.0	null
renal interstitial fibrosis	MGI Mouse Phenotype Associations 2023	1.0	null
TEF-1	MotifMap Predicted Transcription Factor Targets	1.0	null
SW 1990	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.99354
revealed	GeneRIF Biological Term Annotations	1.0	null
HDQP1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.67763
SNU216	CCLE Cell Line Gene CNV Profiles	1.0	1.49235
chain	GeneRIF Biological Term Annotations	1.0	null
hec1a	GeneRIF Biological Term Annotations	1.0	null
DAN-G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21338
nerve	GeneRIF Biological Term Annotations	1.0	null
HCC38	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13211
SCC15	CCLE Cell Line Gene CNV Profiles	1.0	1.42561
OCI-LY-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.17397
HCC1599	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.80324
regulated	GeneRIF Biological Term Annotations	1.0	null
H3K27me3_CD8 Naive Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
gastric	GeneRIF Biological Term Annotations	1.0	null
hypoxiareoxygenation	GeneRIF Biological Term Annotations	1.0	null
JHOC5	CCLE Cell Line Gene CNV Profiles	1.0	1.34378
contributes	GeneRIF Biological Term Annotations	1.0	null
inhibiting	GeneRIF Biological Term Annotations	1.0	null
UACC-257	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2157
pdef	GeneRIF Biological Term Annotations	1.0	null
regulators	GeneRIF Biological Term Annotations	1.0	null
KMS-12-PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19846
Carcinoma, Non-Small-Cell Lung	HuGE Navigator Gene-Phenotype Associations	1.0	null
KYSE-520	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.05845
PPARG-20887899-3T3-L1 PREADIPOCYTE CELLS-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
migration	GeneRIF Biological Term Annotations	1.0	null
FOS_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Hepatomegaly	CTD Gene-Disease Associations	1.0	1.21304
NUGC-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.894951
developmentally	GeneRIF Biological Term Annotations	1.0	null
HGC27	CCLE Cell Line Gene CNV Profiles	1.0	1.50474
JUND	ENCODE Transcription Factor Targets	1.0	null
SPI1_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
loci	GeneRIF Biological Term Annotations	1.0	null
EZH2_fibroblast of lung_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PK-45P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.79537
15284443-Table5	GeneSigDB Published Gene Signatures	1.0	null
CAKI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02544
knockdown	GeneRIF Biological Term Annotations	1.0	null
H4K20me1_HeLa-S3_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
MDAMB453	CCLE Cell Line Gene CNV Profiles	-1.0	-1.62624
dysfunctional	GeneRIF Biological Term Annotations	1.0	null
UCSD-242L	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.976725
MHH-ES-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.17397
PC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.86073
abnormal kidney physiology	MGI Mouse Phenotype Associations 2023	1.0	null
parameters	GeneRIF Biological Term Annotations	1.0	null
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2157
trpm3	GeneRIF Biological Term Annotations	1.0	null
Learning Disorders	CTD Gene-Disease Associations	1.0	1.03197
another	GeneRIF Biological Term Annotations	1.0	null
mirnas	GeneRIF Biological Term Annotations	1.0	null
COLO 201	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13743
etiology	GeneRIF Biological Term Annotations	1.0	null
G-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.971981
EZH2	ENCODE Transcription Factor Targets	1.0	null
CACO-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.68934
NR3C1-21868756-MCF10A-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
sirt1	GeneRIF Biological Term Annotations	1.0	null
HGC-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04275
CAL27	CCLE Cell Line Gene CNV Profiles	1.0	1.71994
AP-1	MotifMap Predicted Transcription Factor Targets	1.0	null
SMARCA4-23332759-OLIGODENDROCYTES-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
BICR 22	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.88832
SET-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.60463
six1	GeneRIF Biological Term Annotations	1.0	null
FOS	ENCODE Transcription Factor Targets	1.0	null
motility	GeneRIF Biological Term Annotations	1.0	null
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.926466
critical	GeneRIF Biological Term Annotations	1.0	null
PANC0213	CCLE Cell Line Gene CNV Profiles	1.0	1.72797
physiology	GeneRIF Biological Term Annotations	1.0	null
rat	GeneRIF Biological Term Annotations	1.0	null
MYC	ENCODE Transcription Factor Targets	1.0	null
hippellindau	GeneRIF Biological Term Annotations	1.0	null
KYSE520	CCLE Cell Line Gene CNV Profiles	-1.0	-2.18676
Hyperplasia	CTD Gene-Disease Associations	1.0	1.02821
C2BBE1	CCLE Cell Line Gene CNV Profiles	-1.0	-3.19895
autophagy	GeneRIF Biological Term Annotations	1.0	null
HNF3A	MotifMap Predicted Transcription Factor Targets	1.0	null
Drug-Induced Liver Injury	CTD Gene-Disease Associations	1.0	1.61506
represses	GeneRIF Biological Term Annotations	1.0	null
reveal	GeneRIF Biological Term Annotations	1.0	null
neuritin	GeneRIF Biological Term Annotations	1.0	null
G120	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32362
SNU-620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.82702
MKN-74	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21707
stem	GeneRIF Biological Term Annotations	1.0	null
NCI-H2228	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19846
than	GeneRIF Biological Term Annotations	1.0	null
includes	GeneRIF Biological Term Annotations	1.0	null
SK-MEL-31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22645
prostate	GeneRIF Biological Term Annotations	1.0	null
roles	GeneRIF Biological Term Annotations	1.0	null
clinicopathological	GeneRIF Biological Term Annotations	1.0	null
C2BBE1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.93509
cholangiocarcinoma	GeneRIF Biological Term Annotations	1.0	null
survivals	GeneRIF Biological Term Annotations	1.0	null
Neural Tube Defects	CTD Gene-Disease Associations	1.0	1.17926
light	GeneRIF Biological Term Annotations	1.0	null
trkbmir2045p	GeneRIF Biological Term Annotations	1.0	null
targeting	GeneRIF Biological Term Annotations	1.0	null
H3K27me3_fibroblast of dermis_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
endometrial	GeneRIF Biological Term Annotations	1.0	null
SK-CO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4262
celllike	GeneRIF Biological Term Annotations	1.0	null
IALM	CCLE Cell Line Gene CNV Profiles	-1.0	-1.68649
vhl	GeneRIF Biological Term Annotations	1.0	null
higher	GeneRIF Biological Term Annotations	1.0	null
peripheral	GeneRIF Biological Term Annotations	1.0	null
CAL 27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00921
TBK1_druginhibition_188_GSE53658	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	1.58391
PPARG	ChEA Transcription Factor Targets	1.0	null
loop	GeneRIF Biological Term Annotations	1.0	null
JHOS-4	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.24687
NCI-H1666	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.902356
interactions	GeneRIF Biological Term Annotations	1.0	null
MOR	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.05774
Kidney Diseases	CTD Gene-Disease Associations	1.0	1.24087
increased susceptibility to injury	MGI Mouse Phenotype Associations 2023	1.0	null
acting	GeneRIF Biological Term Annotations	1.0	null
crest	GeneRIF Biological Term Annotations	1.0	null
FOS_MCF 10A_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hepatocellular	GeneRIF Biological Term Annotations	1.0	null
rpe	GeneRIF Biological Term Annotations	1.0	null
mir204foxc1	GeneRIF Biological Term Annotations	1.0	null
SKM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.42227
glioma	GeneRIF Biological Term Annotations	1.0	null
MDA-MB-453	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.65409
Peripheral Nervous System Diseases	CTD Gene-Disease Associations	1.0	1.01928
SPI1_GM12891_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
provide	GeneRIF Biological Term Annotations	1.0	null
oxidative	GeneRIF Biological Term Annotations	1.0	null
KNS42	CCLE Cell Line Gene CNV Profiles	1.0	1.92525
Cell Transformation, Neoplastic	CTD Gene-Disease Associations	1.0	1.03752
H3K27ac_cerebellum_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
MEWO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.57714
map1lc3b	GeneRIF Biological Term Annotations	1.0	null
inhibits	GeneRIF Biological Term Annotations	1.0	null
epithelial	GeneRIF Biological Term Annotations	1.0	null
NCI-H1693	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2157
drive	GeneRIF Biological Term Annotations	1.0	null
Lung Neoplasms	HuGE Navigator Gene-Phenotype Associations	1.0	null