association	dataset	threshold value	standardized value
membrane-bounded vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.055547
serve	GeneRIF Biological Term Annotations	1.0	null
GTEX-QVUS-0008-SM-447AY	GTEx Tissue Sample Gene Expression Profiles	1.0	0.97424
FOXP2	ENCODE Transcription Factor Targets	1.0	null
glycogen storage disease i	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.544318
COV413A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.00127
phosphatase	GeneRIF Biological Term Annotations	1.0	null
estradiol_homo sapiens_gpl570_gds3283	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
cutaneous	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_skeletal muscle myoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
adenosine	GeneRIF Biological Term Annotations	1.0	null
H2AFZ_CD14-positive monocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GTEX-TML8-0008-SM-4DXUI	GTEx Tissue Sample Gene Expression Profiles	1.0	1.2731
neural arch	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.8601
smooth muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.078972
diagnostic	GeneRIF Biological Term Annotations	1.0	null
H3K27ac_limb_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
GTEX-XBEC-0008-SM-4AT3X	GTEx Tissue Sample Gene Expression Profiles	1.0	1.15325
tumorsuppressor	GeneRIF Biological Term Annotations	1.0	null
NCI-H2170	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.896849
spleen	GTEx Tissue Gene Expression Profiles	1.0	1.26881
GTEX-QESD-0008-SM-447B2	GTEx Tissue Sample Gene Expression Profiles	1.0	2.32636
peripheral nerve sheath neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.082759
GTEX-QV31-0326-SM-447BM	GTEx Tissue Sample Gene Expression Profiles	1.0	0.886782
rectal cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.364139
Hypertension	CTD Gene-Disease Associations	1.0	1.1529
regulating	GeneRIF Biological Term Annotations	1.0	null
hepatoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.066254
GTEX-P4PP-2426-SM-3P61L	GTEx Tissue Sample Gene Expression Profiles	1.0	1.14185
linked	GeneRIF Biological Term Annotations	1.0	null
GTEX-PLZ6-0008-SM-48TD5	GTEx Tissue Sample Gene Expression Profiles	1.0	0.832846
KPNSI9S	CCLE Cell Line Gene CNV Profiles	1.0	1.49766
suppressor	GeneRIF Biological Term Annotations	1.0	null
twist	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_limb_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
malignant	GeneRIF Biological Term Annotations	1.0	null
thp1	GeneRIF Biological Term Annotations	1.0	null
chamber of the eye	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.177268
GTEX-QEL4-0008-SM-447AZ	GTEx Tissue Sample Gene Expression Profiles	1.0	1.33551
skin	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.05564
cardiovascular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.305722
ERG	ChEA Transcription Factor Targets	1.0	null
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
pmns	GeneRIF Biological Term Annotations	1.0	null
BICR18	CCLE Cell Line Gene CNV Profiles	-1.0	-1.38933
H3K4me1_heart_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
myometrial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.362646
SK-N-AS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02294
GTEX-WH7G-0008-SM-4LVNM	GTEx Tissue Sample Gene Expression Profiles	1.0	0.906687
immune	GeneRIF Biological Term Annotations	1.0	null
GTEX-XUW1-0226-SM-4BOOS	GTEx Tissue Sample Gene Expression Profiles	1.0	0.940456
POLR2A_embryonic fibroblast_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GTEX-XUYS-0426-SM-47JX3	GTEx Tissue Sample Gene Expression Profiles	1.0	0.841655
malignant peripheral nerve sheath tumor	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.360395
downregulating	GeneRIF Biological Term Annotations	1.0	null
noninvasive	GeneRIF Biological Term Annotations	1.0	null
cluster	GeneRIF Biological Term Annotations	1.0	null
stem	GeneRIF Biological Term Annotations	1.0	null
GTEX-XMK1-1826-SM-4B66F	GTEx Tissue Sample Gene Expression Profiles	1.0	0.954652
well	GeneRIF Biological Term Annotations	1.0	null
glycogen storage disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.115725
GTEX-U3ZN-0126-SM-4DXUM	GTEx Tissue Sample Gene Expression Profiles	1.0	1.08256
GTEX-WFG7-0008-SM-4LMKB	GTEx Tissue Sample Gene Expression Profiles	1.0	1.32177
EBC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.30105
MDA-MB-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09081
liver	GeneRIF Biological Term Annotations	1.0	null
GTEX-PLZ6-0126-SM-48TC6	GTEx Tissue Sample Gene Expression Profiles	1.0	1.57029
OPM2	CCLE Cell Line Gene CNV Profiles	1.0	2.26677
organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.04313
mirna15	GeneRIF Biological Term Annotations	1.0	null
nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.044043
heart	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.078335
GTEX-RWS6-0008-SM-47JYV	GTEx Tissue Sample Gene Expression Profiles	1.0	1.26606
GTEX-R55G-0926-SM-48FDN	GTEx Tissue Sample Gene Expression Profiles	1.0	0.929892
nuclear part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.048225
urinary bladder cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.221291
aortic endothelial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.172619
H3K4me3_choroid plexus epithelial cell_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
catalytic complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.052955
JIMT-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.24696
exosome (rnase complex)	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.47844
mirs	GeneRIF Biological Term Annotations	1.0	null
GTEX-OOBK-0008-SM-3NB27	GTEx Tissue Sample Gene Expression Profiles	1.0	1.11818
GTEX-SE5C-0008-SM-4B64J	GTEx Tissue Sample Gene Expression Profiles	1.0	0.981657
extracellular vesicular exosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.478843
huntingtons	GeneRIF Biological Term Annotations	1.0	null
non-small cell lung cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.212936
lung cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.056239
glioblastoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.07909
AMO1	CCLE Cell Line Gene CNV Profiles	1.0	1.59976
become	GeneRIF Biological Term Annotations	1.0	null
developing	GeneRIF Biological Term Annotations	1.0	null
Neoplasms	CTD Gene-Disease Associations	1.0	1.39198
epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.402901
largely	GeneRIF Biological Term Annotations	1.0	null
GTEX-VUSH-0008-SM-47JWK	GTEx Tissue Sample Gene Expression Profiles	1.0	1.49174
blood	GTEx Tissue Gene Expression Profiles	-1.0	-1.73373
cervical adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.145944
GTEX-X585-0008-SM-46MU4	GTEx Tissue Sample Gene Expression Profiles	1.0	1.36258
lymph node	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.4634
Fatty Liver	CTD Gene-Disease Associations	1.0	1.63294
nervous system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.042776
rhabdomyosarcoma	GeneRIF Biological Term Annotations	1.0	null
ovary	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.06903
downregulated	GeneRIF Biological Term Annotations	1.0	null
htt	GeneRIF Biological Term Annotations	1.0	null
microrna	GeneRIF Biological Term Annotations	1.0	null
aorta	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.075902
t-24 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.303198
Cell Transformation, Neoplastic	CTD Gene-Disease Associations	1.0	1.41884
candidates	GeneRIF Biological Term Annotations	1.0	null
GTEX-S3XE-0326-SM-4AD6L	GTEx Tissue Sample Gene Expression Profiles	1.0	0.948028
cardiac	GeneRIF Biological Term Annotations	1.0	null
vitreous humor	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.293151
inhibition	GeneRIF Biological Term Annotations	1.0	null
increased myocardial infarct size	MGI Mouse Phenotype Associations 2023	1.0	null
Liver Neoplasms, Experimental	CTD Gene-Disease Associations	1.0	1.31059
PC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.71979
carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.602892
lymph	GeneRIF Biological Term Annotations	1.0	null
miRs in Muscle Cell Differentiation(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
Liver Neoplasms	CTD Gene-Disease Associations	1.0	1.64213
large intestine cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.32774
part	GeneRIF Biological Term Annotations	1.0	null
GTEX-QV31-0008-SM-447AT	GTEx Tissue Sample Gene Expression Profiles	1.0	1.25386
substantial	GeneRIF Biological Term Annotations	1.0	null
benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.042034
GA-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.944729
GTEX-XUZC-1526-SM-4BRV4	GTEx Tissue Sample Gene Expression Profiles	1.0	0.877016
YMB-1-E	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16584
RBBP5	ENCODE Transcription Factor Targets	1.0	null
UCSD-242L	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.54378
GTEX-XBED-0726-SM-4GIAR	GTEx Tissue Sample Gene Expression Profiles	1.0	0.896039
GTEX-S341-1026-SM-4AD71	GTEx Tissue Sample Gene Expression Profiles	1.0	0.905046
H3K27ac_fibroblast of lung_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
extracellular organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.130846
OPM-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.94816
retinal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.049626
STAT1_KD_GDS4754_159_human_JURKAT	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
targets	GeneRIF Biological Term Annotations	1.0	null
pancreas	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.059414
enhances	GeneRIF Biological Term Annotations	1.0	null
glycation	GeneRIF Biological Term Annotations	1.0	null
CAL-12T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.889108
impaired	GeneRIF Biological Term Annotations	1.0	null
GTEX-S4UY-1326-SM-4AD4X	GTEx Tissue Sample Gene Expression Profiles	1.0	1.0569
unfolded	GeneRIF Biological Term Annotations	1.0	null
HCC2688	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-3.6221
ovarian cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.818385
Disease Models, Animal	CTD Gene-Disease Associations	1.0	1.21823
esophageal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.100933
colonic cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.333763
H3K4me1_testis_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
induces	GeneRIF Biological Term Annotations	1.0	null
define	GeneRIF Biological Term Annotations	1.0	null
melanoma	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_cardiac fibroblast_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
STAT3_MCF 10A_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me3_choroid plexus epithelial cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
18381423-SuppTable1a	GeneSigDB Published Gene Signatures	1.0	null
H3K4me1_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
collectively	GeneRIF Biological Term Annotations	1.0	null
GTEX-R55G-0226-SM-48FEI	GTEx Tissue Sample Gene Expression Profiles	1.0	1.14193
GTEX-SSA3-0008-SM-47JWJ	GTEx Tissue Sample Gene Expression Profiles	1.0	1.17369
p53nanog	GeneRIF Biological Term Annotations	1.0	null
artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.057152
rectum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.13529
regulators	GeneRIF Biological Term Annotations	1.0	null
NB1	CCLE Cell Line Gene CNV Profiles	1.0	1.59335
gastrointestinal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.045875
SNU182	CCLE Cell Line Gene CNV Profiles	-1.0	-1.89182
induce	GeneRIF Biological Term Annotations	1.0	null
intrahepatic	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_fibroblast of skin of abdomen_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
mir148b	GeneRIF Biological Term Annotations	1.0	null
GTEX-PWOO-0008-SM-48TDU	GTEx Tissue Sample Gene Expression Profiles	1.0	0.976818
erk2	GeneRIF Biological Term Annotations	1.0	null
SPI1-20517297-HL60-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
cytochrome	GeneRIF Biological Term Annotations	1.0	null
manipulating	GeneRIF Biological Term Annotations	1.0	null
detected	GeneRIF Biological Term Annotations	1.0	null
enhancer	GeneRIF Biological Term Annotations	1.0	null
Hyperplasia	CTD Gene-Disease Associations	1.0	1.2639
STAT3	ENCODE Transcription Factor Targets	1.0	null
GTEX-UJHI-0008-SM-4IHL1	GTEx Tissue Sample Gene Expression Profiles	1.0	1.61987
SNU-423	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.86383
NCI-H2030	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.836253
oral squamous cell carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.290652
small	GeneRIF Biological Term Annotations	1.0	null
GTEX-Q734-0226-SM-48U1A	GTEx Tissue Sample Gene Expression Profiles	1.0	0.839786
gastric cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.324239
calcitriol_homo sapiens_gpl570_gse35925	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
POLR2AphosphoS2_myocyte_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GTEX-PWN1-2426-SM-48TDD	GTEx Tissue Sample Gene Expression Profiles	1.0	1.67866
conclude	GeneRIF Biological Term Annotations	1.0	null
c-33a cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.458759
integument	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.527139
alveolar bone	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.32132
urinary system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.050269
tnfaip3	GeneRIF Biological Term Annotations	1.0	null
GTEX-R55C-0008-SM-48FCF	GTEx Tissue Sample Gene Expression Profiles	1.0	1.03032
primarily	GeneRIF Biological Term Annotations	1.0	null
A-375	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.896849
GTEX-UJHI-1026-SM-4IHJP	GTEx Tissue Sample Gene Expression Profiles	1.0	0.905432
colorectal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.328469
hypervascularity	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_G1E-ER4_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
worse	GeneRIF Biological Term Annotations	1.0	null
laryngeal cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.614571
glioma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.06255
MicroRNAs in cardiomyocyte hypertrophy(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
scleral staphyloma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.30882
cervical cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.606152
COLO 792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.836253
colorectum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.222224
H3K4me3_fibroblast of villous mesenchyme_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
GTEX-U8XE-0008-SM-4E3K4	GTEx Tissue Sample Gene Expression Profiles	1.0	1.42782
GTEX-S341-0726-SM-4AD5R	GTEx Tissue Sample Gene Expression Profiles	1.0	1.75797
GTEX-S4Z8-0226-SM-4AD5K	GTEx Tissue Sample Gene Expression Profiles	1.0	1.42347
exocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.059442
GTEX-RNOR-0008-SM-48FEY	GTEx Tissue Sample Gene Expression Profiles	1.0	0.993966
GTEX-S7PM-0008-SM-3NM9Q	GTEx Tissue Sample Gene Expression Profiles	1.0	0.9766
GTEX-QCQG-0226-SM-48U28	GTEx Tissue Sample Gene Expression Profiles	1.0	1.79903
serves	GeneRIF Biological Term Annotations	1.0	null
G120	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.86383
G61	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.942289
GATA3_SH-SY5Y_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
whereas	GeneRIF Biological Term Annotations	1.0	null
CAL-85-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.94318
release	GeneRIF Biological Term Annotations	1.0	null
SUM 1315M02	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10523
macular holes	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.444676
independent	GeneRIF Biological Term Annotations	1.0	null
cell part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.04303
GTEX-P4PP-0926-SM-48TBZ	GTEx Tissue Sample Gene Expression Profiles	1.0	1.39733
GTEX-U3ZH-0008-SM-4DXT2	GTEx Tissue Sample Gene Expression Profiles	1.0	1.04313
H3K4me3_fibroblast of gingiva_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
NU-DUL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11562
vascular endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.06654
kidney	GeneRIF Biological Term Annotations	1.0	null
biomarker	GeneRIF Biological Term Annotations	1.0	null
pleural mesothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.537021
GTEX-Q2AG-0008-SM-48U2K	GTEx Tissue Sample Gene Expression Profiles	1.0	1.35789
biliary tract cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.063824
insight	GeneRIF Biological Term Annotations	1.0	null
H3K27ac_keratinocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
GTEX-XXEK-0008-SM-4BRW7	GTEx Tissue Sample Gene Expression Profiles	1.0	1.09764
esophageal epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.306805
sense organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.064259
clathrin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.242076
secretion	GeneRIF Biological Term Annotations	1.0	null
GTEX-X638-0226-SM-47JZ9	GTEx Tissue Sample Gene Expression Profiles	1.0	0.965137
determining	GeneRIF Biological Term Annotations	1.0	null
NCI-H1781	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.5989
CHAGOK1	CCLE Cell Line Gene CNV Profiles	1.0	1.34151
GTEX-T5JW-0008-SM-4DM5X	GTEx Tissue Sample Gene Expression Profiles	1.0	1.0473
H3K4me3_osteoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me3_BJ_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.976084
accumulation	GeneRIF Biological Term Annotations	1.0	null
squamous epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.058659
dilated	GeneRIF Biological Term Annotations	1.0	null
female reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.374993
JM1	CCLE Cell Line Gene CNV Profiles	1.0	1.37804
c2c12 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.310421
GTEX-QMR6-0008-SM-447AV	GTEx Tissue Sample Gene Expression Profiles	1.0	1.0888
GTEX-SNOS-0326-SM-4DM6C	GTEx Tissue Sample Gene Expression Profiles	1.0	1.04335
methyltransferase	GeneRIF Biological Term Annotations	1.0	null
POLR2A_limb_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
epidermis	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.057541
glial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.05807
GTEX-QDT8-0008-SM-48U2F	GTEx Tissue Sample Gene Expression Profiles	1.0	1.0978
brain	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051351
mir199a214	GeneRIF Biological Term Annotations	1.0	null
liver	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.310421
H3K4me3_astrocyte of the spinal cord_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
GTEX-S3XE-0226-SM-4AD6I	GTEx Tissue Sample Gene Expression Profiles	1.0	0.990466
GTEX-XOTO-0008-SM-4GICE	GTEx Tissue Sample Gene Expression Profiles	1.0	0.987186
NCI-H1693	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.86383
alcohol	GeneRIF Biological Term Annotations	1.0	null
MYC_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H1048	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.941847
GTEX-U412-0008-SM-4DXTE	GTEx Tissue Sample Gene Expression Profiles	1.0	1.08326
decreased	GeneRIF Biological Term Annotations	1.0	null
Hepatomegaly	CTD Gene-Disease Associations	1.0	1.41884
metastases	GeneRIF Biological Term Annotations	1.0	null
erk1	GeneRIF Biological Term Annotations	1.0	null
OVSAHO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.896849
alpk2	GeneRIF Biological Term Annotations	1.0	null
HCC1011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.42785
GTEX-U8T8-0008-SM-4DXSP	GTEx Tissue Sample Gene Expression Profiles	1.0	1.2031
bone cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.222224
glomerulus	GeneRIF Biological Term Annotations	1.0	null
Memory Disorders	CTD Gene-Disease Associations	1.0	1.33938
GTEX-QCQG-0008-SM-48U2G	GTEx Tissue Sample Gene Expression Profiles	1.0	0.896676
GRANTA-519	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.214
protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.163641
Fibrosis	CTD Gene-Disease Associations	1.0	1.44626
GTEX-PVOW-0008-SM-48TE8	GTEx Tissue Sample Gene Expression Profiles	1.0	1.44397
hcc	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_fibroblast of the aortic adventitia_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
outer dental epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.769441
Non-alcoholic Fatty Liver Disease	CTD Gene-Disease Associations	1.0	1.36361
H3K4me3_fibroblast of mammary gland_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me3_fibroblast of pedal digit skin_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
ccn2dependent	GeneRIF Biological Term Annotations	1.0	null
GTEX-UJHI-0326-SM-4IHJE	GTEx Tissue Sample Gene Expression Profiles	1.0	1.10878
GTEX-S341-0008-SM-4AD6D	GTEx Tissue Sample Gene Expression Profiles	1.0	1.03569
mutated	GeneRIF Biological Term Annotations	1.0	null
GTEX-QCQG-1526-SM-48U25	GTEx Tissue Sample Gene Expression Profiles	1.0	0.945981
circulating	GeneRIF Biological Term Annotations	1.0	null
formation	GeneRIF Biological Term Annotations	1.0	null
establishment	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_Muscle Satellite Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
20485376-TableS3	GeneSigDB Published Gene Signatures	1.0	null
adult stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.241746
Hyperinsulinism	CTD Gene-Disease Associations	1.0	1.05972
respiratory system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.057883
squamous cell carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.06017
H3K36me3_BJ_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
effects	GeneRIF Biological Term Annotations	1.0	null
alagille syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.429642
GTEX-XUZC-0008-SM-4BOQG	GTEx Tissue Sample Gene Expression Profiles	1.0	1.24326
GTEX-X4XX-0008-SM-46MVK	GTEx Tissue Sample Gene Expression Profiles	1.0	1.75596
GTEX-P4QS-0926-SM-48TBS	GTEx Tissue Sample Gene Expression Profiles	1.0	1.26598
Neoplasm Metastasis	CTD Gene-Disease Associations	1.0	1.03159
migration	GeneRIF Biological Term Annotations	1.0	null
NCI-H1975	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2493
amyloid	GeneRIF Biological Term Annotations	1.0	null
gastrointestinal cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.103436
liposarcoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.162505
H3K27ac_Panc1_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
validated	GeneRIF Biological Term Annotations	1.0	null
inhibit	GeneRIF Biological Term Annotations	1.0	null
GTEX-OHPK-2426-SM-3MJGH	GTEx Tissue Sample Gene Expression Profiles	1.0	1.32869
cholangiocarcinoma	GeneRIF Biological Term Annotations	1.0	null
female reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.057845
promising	GeneRIF Biological Term Annotations	1.0	null
strategies	GeneRIF Biological Term Annotations	1.0	null
GTEX-SNMC-0226-SM-4DM6F	GTEx Tissue Sample Gene Expression Profiles	1.0	1.02355
GTEX-XGQ4-0626-SM-4AT56	GTEx Tissue Sample Gene Expression Profiles	1.0	0.894079
epidermal cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.059329
H3K4me3_fibroblast of lung_hg19_3	ENCODE Histone Modification Site Profiles	1.0	null
resistance	GeneRIF Biological Term Annotations	1.0	null
necl2	GeneRIF Biological Term Annotations	1.0	null
saos-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.495701
embryonic structure	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.427254
clathrin coat	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.195681
POLR2A_myocyte_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GTEX-XBEW-0008-SM-4AT3Y	GTEx Tissue Sample Gene Expression Profiles	1.0	1.15439
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
USF1_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cancer stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.292079
Lung Diseases	CTD Gene-Disease Associations	1.0	1.02447
disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.999503
H3K4me1_CH12.LX_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
GTEX-XUW1-0008-SM-4BOQH	GTEx Tissue Sample Gene Expression Profiles	1.0	1.01017
YY1	JASPAR Predicted Transcription Factor Targets	1.0	null
POLR2AphosphoS5_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GTEX-PLZ4-0008-SM-48TE6	GTEx Tissue Sample Gene Expression Profiles	1.0	0.867734
strongly	GeneRIF Biological Term Annotations	1.0	null
connective tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.063024
epithelial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.683919
colorectal cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.122256
GTEX-T2IS-0008-SM-4DM75	GTEx Tissue Sample Gene Expression Profiles	1.0	0.904113
reduced	GeneRIF Biological Term Annotations	1.0	null
EBC1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.45578
oncogene	GeneRIF Biological Term Annotations	1.0	null
HCC366	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.834519
relevance	GeneRIF Biological Term Annotations	1.0	null
syndrome	GeneRIF Biological Term Annotations	1.0	null
saliva	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.238706
gastric cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.337808
squamous	GeneRIF Biological Term Annotations	1.0	null
OVMANA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.889998
ameloblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.223662
GTEX-RWS6-0526-SM-4GIAJ	GTEx Tissue Sample Gene Expression Profiles	1.0	1.00496
animal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.99978
SAP30	ENCODE Transcription Factor Targets	1.0	null
reducing	GeneRIF Biological Term Annotations	1.0	null
glial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.0633
DU4475	CCLE Cell Line Gene CNV Profiles	1.0	1.7702
Neural Tube Defects	CTD Gene-Disease Associations	1.0	1.27316
galnt7	GeneRIF Biological Term Annotations	1.0	null
organism form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.425726
bile duct cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.081909
intestinal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.323509
MDA-MB-435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.942289
nasopharyngeal	GeneRIF Biological Term Annotations	1.0	null
GTEX-RWS6-0426-SM-47JXH	GTEx Tissue Sample Gene Expression Profiles	1.0	0.914394
GTEX-RTLS-0008-SM-48FET	GTEx Tissue Sample Gene Expression Profiles	1.0	1.07693
GTEX-WFG8-0008-SM-4LVN6	GTEx Tissue Sample Gene Expression Profiles	1.0	1.6586
urinary bladder cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.303781
GTEX-U3ZM-0008-SM-4DXTQ	GTEx Tissue Sample Gene Expression Profiles	1.0	1.02684
H3K4me1_liver_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K36me3_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
low	GeneRIF Biological Term Annotations	1.0	null
Precancerous Conditions	CTD Gene-Disease Associations	1.0	1.26794
MAFK_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GTEX-T2YK-0008-SM-4DM6M	GTEx Tissue Sample Gene Expression Profiles	1.0	1.25976
Neoplasms, Experimental	CTD Gene-Disease Associations	1.0	1.08868
NCI-H2073	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.44201
mir148a	GeneRIF Biological Term Annotations	1.0	null
blood vessel endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.100767
highly	GeneRIF Biological Term Annotations	1.0	null
cdh1	GeneRIF Biological Term Annotations	1.0	null
urogenital system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.528719
GTEX-XV7Q-0008-SM-4BRWL	GTEx Tissue Sample Gene Expression Profiles	1.0	1.57286
H3K4me3_brain microvascular endothelial cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.535042
showed	GeneRIF Biological Term Annotations	1.0	null
GTEX-XK95-0008-SM-4AT5G	GTEx Tissue Sample Gene Expression Profiles	1.0	1.32756
GTEX-TMZS-0008-SM-47JWM	GTEx Tissue Sample Gene Expression Profiles	1.0	1.49663
bxpc-3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.23781
gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.537416
Melanoma	CTD Gene-Disease Associations	1.0	1.18554
regulator	GeneRIF Biological Term Annotations	1.0	null
GTEX-Q2AH-0326-SM-48U1K	GTEx Tissue Sample Gene Expression Profiles	1.0	1.15257
diseased	GeneRIF Biological Term Annotations	1.0	null
twist1	GeneRIF Biological Term Annotations	1.0	null
HCC193	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.32803
NAMALWA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.941847
H3K4me3_fibroblast of the aortic adventitia_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
controls	GeneRIF Biological Term Annotations	1.0	null
invasion	GeneRIF Biological Term Annotations	1.0	null
liver cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.595255
GTEX-SNMC-0008-SM-4DM5A	GTEx Tissue Sample Gene Expression Profiles	1.0	1.13754
GTEX-XGQ4-0126-SM-4AT4H	GTEx Tissue Sample Gene Expression Profiles	1.0	1.6045
endothelial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.223419
OPM1	CCLE Cell Line Gene CNV Profiles	1.0	1.54527
cellular	GeneRIF Biological Term Annotations	1.0	null
Ovarian Neoplasms	CTD Gene-Disease Associations	1.0	1.13997
contributes	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_brain microvascular endothelial cell_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
GTEX-XQ3S-0008-SM-4GIDZ	GTEx Tissue Sample Gene Expression Profiles	1.0	1.0449
NTERA-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07634
NCI-H2803	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.88426
HUH1	CCLE Cell Line Gene CNV Profiles	1.0	1.33976
CHP-212	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02575
mirna16	GeneRIF Biological Term Annotations	1.0	null
ataxia	GeneRIF Biological Term Annotations	1.0	null
viscus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.529508
PA-TU-8902	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.86383
ERG-20517297-VCAP-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
H3K4me1_bone marrow macrophage_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
POLR2AphosphoS5_PFSK-1_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
nsclc	GeneRIF Biological Term Annotations	1.0	null
advanced	GeneRIF Biological Term Annotations	1.0	null
GTEX-P78B-0008-SM-48TE1	GTEx Tissue Sample Gene Expression Profiles	1.0	1.14579
outcome	GeneRIF Biological Term Annotations	1.0	null
Ankylosing Spondylitides_macrophage_GSE11886	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-1.42215
GTEX-T5JW-2026-SM-4DM63	GTEx Tissue Sample Gene Expression Profiles	1.0	0.987288
pediatric	GeneRIF Biological Term Annotations	1.0	null
melanoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.40008
membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.045532
BXPC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.835371
astroglia	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.068848
H3K4me3_fibroblast of lung_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
brain cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.060068
cellular_component	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.289569
brain	GTEx Tissue Gene Expression Profiles	-1.0	-1.18861
GTEX-UJHI-0926-SM-4IHKF	GTEx Tissue Sample Gene Expression Profiles	1.0	0.835105
vitamin c_homo sapiens_gpl570_gds3635	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
cell type benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.182086
KELLY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.944729
GTEX-Q734-0008-SM-48U2I	GTEx Tissue Sample Gene Expression Profiles	1.0	2.0708
H3K4me3_fibroblast of upper leg skin_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
vertebrate muscular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.280012
ovary	GTEx Tissue Gene Expression Profiles	1.0	1.25786
mir199a3pmir214	GeneRIF Biological Term Annotations	1.0	null
JUND	ENCODE Transcription Factor Targets	1.0	null
NCIH2073	CCLE Cell Line Gene CNV Profiles	1.0	1.35481
nucleoplasm part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.064822
NCIH526	CCLE Cell Line Gene CNV Profiles	1.0	1.50214
breast	GeneRIF Biological Term Annotations	1.0	null
HCC2270	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.985448
posttranscriptionally	GeneRIF Biological Term Annotations	1.0	null
bax	GeneRIF Biological Term Annotations	1.0	null
chiefly	GeneRIF Biological Term Annotations	1.0	null
GTEX-XYKS-1026-SM-4BRVH	GTEx Tissue Sample Gene Expression Profiles	1.0	0.849518
tissues, cell types and enzyme sources	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.00676
NCI-H2810	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.65503
G140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.835371
H3K4me1_osteoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
tooth	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.138901
carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.364824
nodes	GeneRIF Biological Term Annotations	1.0	null
proliferation	GeneRIF Biological Term Annotations	1.0	null
compared	GeneRIF Biological Term Annotations	1.0	null
EZH2_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
organ system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.0484
disease of metabolism	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.042537
nras	GeneRIF Biological Term Annotations	1.0	null
ikkbetanfkappab	GeneRIF Biological Term Annotations	1.0	null
mir150	GeneRIF Biological Term Annotations	1.0	null
GTEX-T6MO-1126-SM-4DM5D	GTEx Tissue Sample Gene Expression Profiles	1.0	2.19237
treatment	GeneRIF Biological Term Annotations	1.0	null
responsible	GeneRIF Biological Term Annotations	1.0	null
urinary bladder	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.113627
POLR2AphosphoS5_PFSK-1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
regional	GeneRIF Biological Term Annotations	1.0	null
replication	GeneRIF Biological Term Annotations	1.0	null
invasiveness	GeneRIF Biological Term Annotations	1.0	null
fibrotic	GeneRIF Biological Term Annotations	1.0	null
Breast Neoplasms	CTD Gene-Disease Associations	1.0	2.88009
negatively	GeneRIF Biological Term Annotations	1.0	null
suppression	GeneRIF Biological Term Annotations	1.0	null
105KC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.25142
molecular	GeneRIF Biological Term Annotations	1.0	null
cisplatin	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_fibroblast of skin of abdomen_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
Liver Cirrhosis	CTD Gene-Disease Associations	1.0	1.16035
alcam	GeneRIF Biological Term Annotations	1.0	null
large intestine	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.11456
betacatenin	GeneRIF Biological Term Annotations	1.0	null
GTEX-P4QR-0008-SM-48TE2	GTEx Tissue Sample Gene Expression Profiles	1.0	0.887538
liver cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.0606
GTEX-Q2AH-0226-SM-48U1I	GTEx Tissue Sample Gene Expression Profiles	1.0	1.59738
exosomes	GeneRIF Biological Term Annotations	1.0	null
SLR25	CCLE Cell Line Gene CNV Profiles	1.0	2.52768
tumorigenesis	GeneRIF Biological Term Annotations	1.0	null
Kidney Diseases	CTD Gene-Disease Associations	1.0	1.59708
NCIH1876	CCLE Cell Line Gene CNV Profiles	1.0	3.05557
microrna214	GeneRIF Biological Term Annotations	1.0	null
HCC1599	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14511
bronchogenic carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.057815
capable	GeneRIF Biological Term Annotations	1.0	null
SNU-182	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.70983
salivary gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.075852
esophageal squamous cell carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.380627
showing	GeneRIF Biological Term Annotations	1.0	null
tooth germ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.424963
GTEX-XUJ4-2126-SM-4BOOX	GTEx Tissue Sample Gene Expression Profiles	1.0	0.877558
GTEX-PWCY-1326-SM-48TCU	GTEx Tissue Sample Gene Expression Profiles	1.0	0.945621
GTEX-XUZC-1026-SM-4BOPY	GTEx Tissue Sample Gene Expression Profiles	1.0	2.59619
NCI-H196	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.75762
Urinary Bladder Neoplasms	CTD Gene-Disease Associations	1.0	1.08726
CAL120	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35755
telangiectasia	GeneRIF Biological Term Annotations	1.0	null
PBX3_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SRF and miRs in Smooth Muscle Differentiation and Proliferation(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
gastrointestinal system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.802795
colonic adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.237513
pathogenesis	GeneRIF Biological Term Annotations	1.0	null
homolog	GeneRIF Biological Term Annotations	1.0	null
vitreous chamber of the eye	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.28107
plexinb1	GeneRIF Biological Term Annotations	1.0	null
metastatic	GeneRIF Biological Term Annotations	1.0	null
FOS_MCF 10A_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
number	GeneRIF Biological Term Annotations	1.0	null
NCIH929	CCLE Cell Line Gene CNV Profiles	1.0	2.08261
Glucose Intolerance	CTD Gene-Disease Associations	1.0	1.169
intercellular	GeneRIF Biological Term Annotations	1.0	null
osteosarcoma	GeneRIF Biological Term Annotations	1.0	null
present	GeneRIF Biological Term Annotations	1.0	null
distant	GeneRIF Biological Term Annotations	1.0	null
Poisoning	CTD Gene-Disease Associations	1.0	1.31
GTEX-QDVJ-1326-SM-48U1X	GTEx Tissue Sample Gene Expression Profiles	1.0	0.935786
CAKI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.47303
transfer	GeneRIF Biological Term Annotations	1.0	null
astroglial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.06938
tfap2	GeneRIF Biological Term Annotations	1.0	null
melanocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.432608
Glioma	CTD Gene-Disease Associations	1.0	1.05828
tissue	GeneRIF Biological Term Annotations	1.0	null
radiotherapy	GeneRIF Biological Term Annotations	1.0	null
recurrent	GeneRIF Biological Term Annotations	1.0	null
methyltransferase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.44052
glioma	GeneRIF Biological Term Annotations	1.0	null
GTEX-PW2O-0008-SM-48TEB	GTEx Tissue Sample Gene Expression Profiles	1.0	1.14018
lymphoid tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.448731
liver cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.776568
germ layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.214202
KMS20	CCLE Cell Line Gene CNV Profiles	1.0	1.60117
20230785-Table1	GeneSigDB Published Gene Signatures	1.0	null
bone cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.07684
H3K4me3_skeletal muscle cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
cervical cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.525955
mir146a	GeneRIF Biological Term Annotations	1.0	null
connective tissue cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.192657
NCI-H1770	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.3472
correlated	GeneRIF Biological Term Annotations	1.0	null
paradigm	GeneRIF Biological Term Annotations	1.0	null
NCIH2029	CCLE Cell Line Gene CNV Profiles	-1.0	-1.70647
etiology	GeneRIF Biological Term Annotations	1.0	null
GTEX-O5YT-0926-SM-48TDG	GTEx Tissue Sample Gene Expression Profiles	1.0	1.107
germinal center	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.307167
intrahepatic cholangiocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.247852
23132/87	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.857217
gastrointestinal tract	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.113135
GTEX-UJHI-1226-SM-4IHLR	GTEx Tissue Sample Gene Expression Profiles	1.0	2.39895
WSU-FSCCL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.857217
infiltrating	GeneRIF Biological Term Annotations	1.0	null
non	GeneRIF Biological Term Annotations	1.0	null
RBPJ	ChEA Transcription Factor Targets	1.0	null
H3K4me2_keratinocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
20068076-SuppTable4	GeneSigDB Published Gene Signatures	1.0	null
GTEX-XUJ4-1126-SM-4BOPC	GTEx Tissue Sample Gene Expression Profiles	1.0	0.905193
H3K4me1_CH12.LX_mm9_4	ENCODE Histone Modification Site Profiles	1.0	null
GTEX-UJHI-0226-SM-4IHJL	GTEx Tissue Sample Gene Expression Profiles	1.0	0.937512
mrnas	GeneRIF Biological Term Annotations	1.0	null
embryo	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.492182
female reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.899924
GTEX-XUJ4-0326-SM-4BOP9	GTEx Tissue Sample Gene Expression Profiles	1.0	0.918808
Uterine Cervical Neoplasms	CTD Gene-Disease Associations	1.0	1.02225
GATA3	ENCODE Transcription Factor Targets	1.0	null
pancreatic cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.066009
liver carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.755342
H3K4me3_fibroblast of pedal digit skin_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
prevent	GeneRIF Biological Term Annotations	1.0	null
H3K27ac_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
support	GeneRIF Biological Term Annotations	1.0	null
microrna98	GeneRIF Biological Term Annotations	1.0	null
vein	GeneRIF Biological Term Annotations	1.0	null
GTEX-U4B1-0526-SM-4DXTK	GTEx Tissue Sample Gene Expression Profiles	1.0	1.20266
membrane coat	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.169099
H3K4me3_fibroblast of lung_hg19_6	ENCODE Histone Modification Site Profiles	1.0	null
GTEX-QV44-0008-SM-447AX	GTEx Tissue Sample Gene Expression Profiles	1.0	1.36378
increased cardiomyocyte apoptosis	MGI Mouse Phenotype Associations 2023	1.0	null
Nerve Degeneration	CTD Gene-Disease Associations	1.0	1.42047
death	GeneRIF Biological Term Annotations	1.0	null
apoptosis	GeneRIF Biological Term Annotations	1.0	null
HT1197	CCLE Cell Line Gene CNV Profiles	-1.0	-2.06007
MOLP-8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.942159
GTEX-R45C-0008-SM-48FF2	GTEx Tissue Sample Gene Expression Profiles	1.0	0.837633
H3K4me1_fibroblast of lung_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K36me3_fibroblast of lung_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
LN-18	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.942289
lung	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.058679
Prenatal Exposure Delayed Effects	CTD Gene-Disease Associations	1.0	1.38071
peripheral nervous system neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.06873
malignant pleural mesothelioma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.192344
urinary bladder cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.221521
skeletal system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.314772
PK59	CCLE Cell Line Gene CNV Profiles	-1.0	-2.28869
esc/e(z) complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.661208
H3K4me2_fibroblast of lung_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
involving	GeneRIF Biological Term Annotations	1.0	null
jnk1	GeneRIF Biological Term Annotations	1.0	null
psmd10	GeneRIF Biological Term Annotations	1.0	null
esophagus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.161624
astrocytoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.076876
colonocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.291365
myometrium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.323144
MYC	ENCODE Transcription Factor Targets	1.0	null
GTEX-XPVG-0008-SM-4GICH	GTEx Tissue Sample Gene Expression Profiles	1.0	1.09531
Cardiomyopathies	CTD Gene-Disease Associations	1.0	1.05498
predictor	GeneRIF Biological Term Annotations	1.0	null
GTEX-T6MO-1026-SM-4DM72	GTEx Tissue Sample Gene Expression Profiles	1.0	0.865726
targeting	GeneRIF Biological Term Annotations	1.0	null
USF1_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
POLR2A_MCF 10A_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mir21	GeneRIF Biological Term Annotations	1.0	null
sezary	GeneRIF Biological Term Annotations	1.0	null
mir125b	GeneRIF Biological Term Annotations	1.0	null
adenovirus	GeneRIF Biological Term Annotations	1.0	null
G111	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.49353
mouth	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.074336
BCPAP	CCLE Cell Line Gene CNV Profiles	-1.0	-1.9723
adenocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.586828
delayed	GeneRIF Biological Term Annotations	1.0	null
targeted	GeneRIF Biological Term Annotations	1.0	null
SK-MEL-28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.17031
GTEX-XV7Q-1826-SM-4BRUV	GTEx Tissue Sample Gene Expression Profiles	1.0	0.825405
H3K4me3_cardiac fibroblast_hg19_3	ENCODE Histone Modification Site Profiles	1.0	null
Drug-Related Side Effects and Adverse Reactions	CTD Gene-Disease Associations	1.0	1.31716
esophageal cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.656648
H3K36me3_heart_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
colorectal	GeneRIF Biological Term Annotations	1.0	null
Acute Kidney Injury	CTD Gene-Disease Associations	1.0	1.31208
osteosarcoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.165655
indicator	GeneRIF Biological Term Annotations	1.0	null
20028859-TableS2	GeneSigDB Published Gene Signatures	1.0	null
altered	GeneRIF Biological Term Annotations	1.0	null
colorectal adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.233731
H3K4me1_mammary epithelial cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
EFM-19	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.985448
Lung Neoplasms	CTD Gene-Disease Associations	1.0	1.09716
H3K36me3_endothelial cell of umbilical vein_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me1_keratinocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
survival	GeneRIF Biological Term Annotations	1.0	null
muscle	GTEx Tissue Gene Expression Profiles	-1.0	-0.849116
eosinophilic esophagitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.386308
Prenatal Injuries	CTD Gene-Disease Associations	1.0	1.09154
cervical	GeneRIF Biological Term Annotations	1.0	null
larynx	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.147175
abnormal response to cardiac infarction	MGI Mouse Phenotype Associations 2023	1.0	null
sk-hep-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.36526
HCC95	CCLE Cell Line Gene CNV Profiles	-1.0	-1.55749
GTEX-OHPK-2026-SM-3MJH7	GTEx Tissue Sample Gene Expression Profiles	1.0	1.34898
arterial endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.309697
cdx2_20696899_caco2_lof_human_gpl570_gse22572	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.145398
BHY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.19775
beta	GeneRIF Biological Term Annotations	1.0	null
binds	GeneRIF Biological Term Annotations	1.0	null
specific	GeneRIF Biological Term Annotations	1.0	null
mir486	GeneRIF Biological Term Annotations	1.0	null
pancreatic cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.066009
CAL148	CCLE Cell Line Gene CNV Profiles	1.0	1.54783
muscle cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.210253
epithelial ovarian cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.399871
reveals	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_fibroblast of villous mesenchyme_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me3_skeletal muscle cell_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
poor	GeneRIF Biological Term Annotations	1.0	null
GTEX-QLQW-0126-SM-447BK	GTEx Tissue Sample Gene Expression Profiles	1.0	1.05843
ectoderm	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.145565
H3K4me3_cardiac muscle cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
axis	GeneRIF Biological Term Annotations	1.0	null
embryonic stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.426109
endocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.50471
ppp1r13l	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_fibroblast of foreskin _hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
GTEX-T5JW-0126-SM-4DM6K	GTEx Tissue Sample Gene Expression Profiles	1.0	1.80913
mir205	GeneRIF Biological Term Annotations	1.0	null
extracellular vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.478843
FOS_MCF 10A_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ptenakt	GeneRIF Biological Term Annotations	1.0	null
digestive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.31877
hepatocellular carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.758193
H4K20me1_fibroblast of dermis_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
macromolecular complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.175745
TP63-23658742-EP156T-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
GTEX-OHPL-2026-SM-3TW8R	GTEx Tissue Sample Gene Expression Profiles	1.0	0.856626
enamel epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.351485
throat	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.070874
H3K4me3_SK-N-SH_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
GTEX-T5JW-0326-SM-4DM6J	GTEx Tissue Sample Gene Expression Profiles	1.0	1.10858
NFE2	ENCODE Transcription Factor Targets	1.0	null
regions	GeneRIF Biological Term Annotations	1.0	null
USF1_ECC-1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GTEX-XUJ4-1326-SM-4BOQ9	GTEx Tissue Sample Gene Expression Profiles	1.0	1.72367
arterial endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.227445
gastric cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.541377
esophageal	GeneRIF Biological Term Annotations	1.0	null
PBX3	ENCODE Transcription Factor Targets	1.0	null
astrocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.069942
BL41	CCLE Cell Line Gene CNV Profiles	1.0	1.87153
H3K4me1_G1E-ER4_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
internal female genital organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.445268
sensory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.049065
silencing	GeneRIF Biological Term Annotations	1.0	null
MAFK_ES-E14_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
OKAJIMA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.32721
KYSE410	CCLE Cell Line Gene CNV Profiles	-1.0	-1.53844
coated membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.161068
JIMT1	CCLE Cell Line Gene CNV Profiles	1.0	2.04165
H3K4me3_fibroblast of mammary gland_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
POLR2A_IMR-90_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GTEX-QV31-0126-SM-447BP	GTEx Tissue Sample Gene Expression Profiles	1.0	1.29504
cdk6	GeneRIF Biological Term Annotations	1.0	null
metastasisrelated	GeneRIF Biological Term Annotations	1.0	null
aortic endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.161692
GTEX-W5WG-0008-SM-4KL25	GTEx Tissue Sample Gene Expression Profiles	1.0	1.54228
contribute	GeneRIF Biological Term Annotations	1.0	null
myoblast cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.242054
oncomirna	GeneRIF Biological Term Annotations	1.0	null
following	GeneRIF Biological Term Annotations	1.0	null
glia	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.057873
product	GeneRIF Biological Term Annotations	1.0	null
GTEX-PWN1-2026-SM-48TD9	GTEx Tissue Sample Gene Expression Profiles	1.0	1.14497
GTEX-RU72-0008-SM-46MV8	GTEx Tissue Sample Gene Expression Profiles	1.0	1.24848
H3K4me3_fibroblast of gingiva_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
JUND_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
preterm	GeneRIF Biological Term Annotations	1.0	null
carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.850425
NCI-H460	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.3472
glycogen metabolism disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.11171
there	GeneRIF Biological Term Annotations	1.0	null
epithelioma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.849585
directly	GeneRIF Biological Term Annotations	1.0	null
POLR2A_HGPS cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
enlarged myocardial fiber	MGI Mouse Phenotype Associations 2023	1.0	null
SAP30_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
lung	GeneRIF Biological Term Annotations	1.0	null
mirna214	GeneRIF Biological Term Annotations	1.0	null
LN382	CCLE Cell Line Gene CNV Profiles	-1.0	-2.34013
FOS_MCF 10A_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
fibrogenesis	GeneRIF Biological Term Annotations	1.0	null
Liver Diseases	CTD Gene-Disease Associations	1.0	1.19179
GTEX-OHPL-2426-SM-48TDN	GTEx Tissue Sample Gene Expression Profiles	1.0	2.0339
noncoding	GeneRIF Biological Term Annotations	1.0	null
tubules	GeneRIF Biological Term Annotations	1.0	null
NCI-H187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.62797
USF1_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cholangiocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.121187
GAMG	CCLE Cell Line Gene CNV Profiles	-1.0	-1.42384
NCI-H929	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.38798
increases	GeneRIF Biological Term Annotations	1.0	null
HS 746T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22968
GTEX-PX3G-3026-SM-48TZR	GTEx Tissue Sample Gene Expression Profiles	1.0	0.873687
KMS-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12522
NCI-H2122	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.942289
blood	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.249006
contractility	GeneRIF Biological Term Annotations	1.0	null
GTEX-XUJ4-0008-SM-4BOQI	GTEx Tissue Sample Gene Expression Profiles	1.0	1.21254
lipomatous cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.162505
GTEX-PWCY-1426-SM-48TCT	GTEx Tissue Sample Gene Expression Profiles	1.0	0.988922
squamous cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.424389
hepatoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.484766
into	GeneRIF Biological Term Annotations	1.0	null
leads	GeneRIF Biological Term Annotations	1.0	null
cytoplasmic part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.042217
mirna	GeneRIF Biological Term Annotations	1.0	null
abolishes	GeneRIF Biological Term Annotations	1.0	null
regulatory	GeneRIF Biological Term Annotations	1.0	null
USF1_HCT116_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GTEX-RU1J-0008-SM-46MV9	GTEx Tissue Sample Gene Expression Profiles	1.0	1.00716
H3K4me3_foreskin fibroblast_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
GTEX-W5X1-0008-SM-4LMKA	GTEx Tissue Sample Gene Expression Profiles	1.0	1.6587
lung cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054203
disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.13289
H3K4me3_foreskin fibroblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
lzts1	GeneRIF Biological Term Annotations	1.0	null
SW 1116	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05145
myometrial	GeneRIF Biological Term Annotations	1.0	null
USF1_SK-N-SH_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
represses	GeneRIF Biological Term Annotations	1.0	null
KURAMOCHI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14511
POLR2AphosphoS5_SK-N-MC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GTEX-P4PQ-0426-SM-3NMCI	GTEx Tissue Sample Gene Expression Profiles	1.0	0.927385
esophagitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.130003
MYCN_01_160	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.61769
promotes	GeneRIF Biological Term Annotations	1.0	null
mek3	GeneRIF Biological Term Annotations	1.0	null
ZR751	CCLE Cell Line Gene CNV Profiles	1.0	1.68167
NCI-H810	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.3472
PK-59	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.94563
H3K4me3_fibroblast of lung_hg19_7	ENCODE Histone Modification Site Profiles	1.0	null
H2AFZ_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GTEX-SIU8-0008-SM-4BRUC	GTEx Tissue Sample Gene Expression Profiles	1.0	1.19881
musculoskeletal system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.266913
inhibiting	GeneRIF Biological Term Annotations	1.0	null
GTEX-XPVG-2126-SM-4B667	GTEx Tissue Sample Gene Expression Profiles	1.0	0.838288
GTEX-P4PP-2026-SM-3P61N	GTEx Tissue Sample Gene Expression Profiles	1.0	0.831648
GTEX-XUZC-1126-SM-4BOPZ	GTEx Tissue Sample Gene Expression Profiles	1.0	1.54846
PK-45H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09027
identifies	GeneRIF Biological Term Annotations	1.0	null
ezh2	GeneRIF Biological Term Annotations	1.0	null
H4K20me1_osteoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
loop	GeneRIF Biological Term Annotations	1.0	null
metastasis	GeneRIF Biological Term Annotations	1.0	null
EZH2	ENCODE Transcription Factor Targets	1.0	null
reduces	GeneRIF Biological Term Annotations	1.0	null
H3K4me2_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
SK-MEL-31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82454
NCI-H2804	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26671
GTEX-RN64-0008-SM-48FEZ	GTEx Tissue Sample Gene Expression Profiles	1.0	1.46677
SKLMS1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.71256
H2AFZ_endothelial cell of umbilical vein_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
pathologic	GeneRIF Biological Term Annotations	1.0	null
CTCF	ENCODE Transcription Factor Targets	1.0	null
pca	GeneRIF Biological Term Annotations	1.0	null
GTEX-XAJ8-0126-SM-47JYG	GTEx Tissue Sample Gene Expression Profiles	1.0	0.860838
NCIH1385	CCLE Cell Line Gene CNV Profiles	1.0	1.831
Glioblastoma	CTD Gene-Disease Associations	1.0	1.08655
hematopoietic system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.404418
identify	GeneRIF Biological Term Annotations	1.0	null
CTCF_HeLa-S3_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GTEX-S4P3-0326-SM-4AD6P	GTEx Tissue Sample Gene Expression Profiles	1.0	0.964493
GTEX-X638-0008-SM-47JZ7	GTEx Tissue Sample Gene Expression Profiles	1.0	1.71448
Necrosis	CTD Gene-Disease Associations	1.0	1.67761
hepatocellular	GeneRIF Biological Term Annotations	1.0	null
colonic cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.33413
H3K36me3_BJ_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ageinduced	GeneRIF Biological Term Annotations	1.0	null
GTEX-P4QT-0008-SM-48TDZ	GTEx Tissue Sample Gene Expression Profiles	1.0	1.01449
Colonic Neoplasms	CTD Gene-Disease Associations	1.0	1.05828
GTEX-XLM4-0008-SM-4AT4W	GTEx Tissue Sample Gene Expression Profiles	1.0	1.44915
H3K4me2_mammary epithelial cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
GTEX-X4XY-0008-SM-46MVL	GTEx Tissue Sample Gene Expression Profiles	1.0	1.34259
mir137	GeneRIF Biological Term Annotations	1.0	null
e1a	GeneRIF Biological Term Annotations	1.0	null
GTEX-QMRM-0008-SM-447B1	GTEx Tissue Sample Gene Expression Profiles	1.0	1.56187
histone methyltransferase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.495395
GTEX-Q2AH-0626-SM-48TZJ	GTEx Tissue Sample Gene Expression Profiles	1.0	0.969423
polycomb	GeneRIF Biological Term Annotations	1.0	null
alimentary canal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.106059
induced	GeneRIF Biological Term Annotations	1.0	null
central nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051311
muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.366007
HS 578T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.94318
GTEX-S3XE-0626-SM-4AD6B	GTEx Tissue Sample Gene Expression Profiles	1.0	1.28139
H3K36me3_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.054678
controlled	GeneRIF Biological Term Annotations	1.0	null
CAOV3	CCLE Cell Line Gene CNV Profiles	-1.0	-1.71034
bcl2l2	GeneRIF Biological Term Annotations	1.0	null
abnormal myocardial fiber physiology	MGI Mouse Phenotype Associations 2023	1.0	null
pancreatic adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.09427
GTEX-XUZC-0626-SM-4BOPG	GTEx Tissue Sample Gene Expression Profiles	1.0	0.999952
mir214	GeneRIF Biological Term Annotations	1.0	null
pediatric osteosarcoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.961634
eye and adnexa disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.050865
A2780	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.855906
Drug-Induced Liver Injury	CTD Gene-Disease Associations	1.0	1.9183
profiling	GeneRIF Biological Term Annotations	1.0	null
GTEX-X5EB-0008-SM-46MU3	GTEx Tissue Sample Gene Expression Profiles	1.0	1.2431
gametocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.153611
GTEX-QLQ7-0008-SM-447AW	GTEx Tissue Sample Gene Expression Profiles	1.0	1.43819
GTEX-QDVN-0008-SM-48U2D	GTEx Tissue Sample Gene Expression Profiles	1.0	1.18829
intestine	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.113615
GTEX-SE5C-2126-SM-4BRUJ	GTEx Tissue Sample Gene Expression Profiles	1.0	0.897434
ME-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09081
LP1	CCLE Cell Line Gene CNV Profiles	1.0	1.64986
GTEX-SNOS-0726-SM-4DM5Z	GTEx Tissue Sample Gene Expression Profiles	1.0	0.9076
stomach	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.124363
neighboring	GeneRIF Biological Term Annotations	1.0	null
regulated	GeneRIF Biological Term Annotations	1.0	null
organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.042729
GTEX-QVJO-0008-SM-447AU	GTEx Tissue Sample Gene Expression Profiles	1.0	0.876251
GTEX-P44H-0008-SM-48TDW	GTEx Tissue Sample Gene Expression Profiles	1.0	1.00551
GTEX-S4Q7-0008-SM-3NM8A	GTEx Tissue Sample Gene Expression Profiles	1.0	1.53921
TP63-22573176-HFKS-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
POLR2A	ENCODE Transcription Factor Targets	1.0	null
spread	GeneRIF Biological Term Annotations	1.0	null
HUPT4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.80947
POLR2A_heart_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
upregulation	GeneRIF Biological Term Annotations	1.0	null
19924232-TableS1	GeneSigDB Published Gene Signatures	1.0	null
GTEX-PWCY-0008-SM-48TE9	GTEx Tissue Sample Gene Expression Profiles	1.0	1.10161
bile duct carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.088632
cell type cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.635921
LCLC-103H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33939
adenoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.242945
therapeutic	GeneRIF Biological Term Annotations	1.0	null
urinary bladder cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.102314
inherited metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.04392
PC3	CCLE Cell Line Gene CNV Profiles	1.0	2.24727
oxide	GeneRIF Biological Term Annotations	1.0	null
extracellular membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.478843
uterine cervix	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.509027
hepatobiliary disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.059398
MAFK	ENCODE Transcription Factor Targets	1.0	null
H3K4me3_fibroblast of lung_hg19_5	ENCODE Histone Modification Site Profiles	1.0	null
messenger	GeneRIF Biological Term Annotations	1.0	null
macroglia	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.064758
GTEX-WFON-0126-SM-4LVM9	GTEx Tissue Sample Gene Expression Profiles	1.0	1.68413
tube	GeneRIF Biological Term Annotations	1.0	null
GTEX-UJHI-0126-SM-4IHLP	GTEx Tissue Sample Gene Expression Profiles	1.0	1.2341
TP63	ChEA Transcription Factor Targets	1.0	null
pathways	GeneRIF Biological Term Annotations	1.0	null
astroblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.06938
lung cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.055406
MC116	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.855906
RBPJ-21746931-IB4-LCL-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
intracellular part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.044074
small intestine	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.081078
GTEX-TKQ2-0008-SM-4DM5L	GTEx Tissue Sample Gene Expression Profiles	1.0	1.23624
esophageal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.34371
extracellular region part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.047304
GTEX-VUSG-0008-SM-4KL24	GTEx Tissue Sample Gene Expression Profiles	1.0	1.35947
H3K4me3_WI38_hg19_4	ENCODE Histone Modification Site Profiles	1.0	null
critical	GeneRIF Biological Term Annotations	1.0	null
increasing	GeneRIF Biological Term Annotations	1.0	null
GTEX-R55D-1526-SM-48FEJ	GTEx Tissue Sample Gene Expression Profiles	1.0	1.01439
mtfa	GeneRIF Biological Term Annotations	1.0	null
GTEX-T5JW-0426-SM-4DM7M	GTEx Tissue Sample Gene Expression Profiles	1.0	2.34842
bladder	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.096287
melanomas	GeneRIF Biological Term Annotations	1.0	null
STAT3_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
demonstrated	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_BJ_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
brain cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.066976
reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.817976
H3K4me3_BE2C_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
U118MG	CCLE Cell Line Gene CNV Profiles	-1.0	-1.37127
GTEX-R55G-0008-SM-48FEX	GTEx Tissue Sample Gene Expression Profiles	1.0	1.09744
USF1_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
variants	GeneRIF Biological Term Annotations	1.0	null
SUM 149PT	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.94318
intestinal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.325187
mir124	GeneRIF Biological Term Annotations	1.0	null
ovarian	GeneRIF Biological Term Annotations	1.0	null
pleural cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.190168
GTEX-XYKS-1326-SM-4BRUN	GTEx Tissue Sample Gene Expression Profiles	1.0	1.02493
ocsc	GeneRIF Biological Term Annotations	1.0	null
clinical	GeneRIF Biological Term Annotations	1.0	null
p53	GeneRIF Biological Term Annotations	1.0	null
SPI1	ChEA Transcription Factor Targets	1.0	null
GTEX-WEY5-0008-SM-4LMKC	GTEx Tissue Sample Gene Expression Profiles	1.0	1.33928
glioblastoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.08168
synthase	GeneRIF Biological Term Annotations	1.0	null
intracellular organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.042962
niche	GeneRIF Biological Term Annotations	1.0	null
crypt	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.185977
Infertility, Male	CTD Gene-Disease Associations	1.0	1.07696
ctnnb1	GeneRIF Biological Term Annotations	1.0	null
gankyrin	GeneRIF Biological Term Annotations	1.0	null
cervical carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.896045
RERFLCKJ	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33746
downregulation	GeneRIF Biological Term Annotations	1.0	null
p450	GeneRIF Biological Term Annotations	1.0	null
indicating	GeneRIF Biological Term Annotations	1.0	null
endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.0792
RERF-LC-OK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.37814
upregulated	GeneRIF Biological Term Annotations	1.0	null
exosomal	GeneRIF Biological Term Annotations	1.0	null
provide	GeneRIF Biological Term Annotations	1.0	null
CHAGO-K-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.07925
synovium cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.174617
colorectal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.364139
muscular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.431843
JUND_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GTEX-XUYS-0008-SM-47JYZ	GTEx Tissue Sample Gene Expression Profiles	1.0	1.27658
GTEX-XUJ4-1526-SM-4BONU	GTEx Tissue Sample Gene Expression Profiles	1.0	1.74001
nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.050878
aorta endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.150655
ovary cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.508242
GTEX-XMK1-0126-SM-4B65F	GTEx Tissue Sample Gene Expression Profiles	1.0	0.887358
H3K4me3_fibroblast of lung_hg19_4	ENCODE Histone Modification Site Profiles	1.0	null
including	GeneRIF Biological Term Annotations	1.0	null
ubc9	GeneRIF Biological Term Annotations	1.0	null
SNU-601	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.86383
GTEX-XMD3-0008-SM-4AT4V	GTEx Tissue Sample Gene Expression Profiles	1.0	1.17015
endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.092576
cardiomyopathy	GeneRIF Biological Term Annotations	1.0	null
tfap2c	GeneRIF Biological Term Annotations	1.0	null
H3K18ac_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
hela cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.530298
GTEX-T5JC-0008-SM-4DM6A	GTEx Tissue Sample Gene Expression Profiles	1.0	0.942812
20054351-Table2	GeneSigDB Published Gene Signatures	1.0	null
H3K27ac_fibroblast of lung_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
JJ012	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.980375
LP-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.78805
OVCAR-8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.88741
GTEX-TKQ1-0008-SM-4DXSO	GTEx Tissue Sample Gene Expression Profiles	1.0	0.929193
NCI-H1734	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.88741
sclera	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.28107
GTEX-P4QS-0008-SM-48TDY	GTEx Tissue Sample Gene Expression Profiles	1.0	1.53609
GTEX-UPK5-0008-SM-4IHJD	GTEx Tissue Sample Gene Expression Profiles	1.0	1.4973
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.86383
t-98g cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.299601
hela	GeneRIF Biological Term Annotations	1.0	null
cardiac fibrosis	MGI Mouse Phenotype Associations 2023	1.0	null
Anemia	CTD Gene-Disease Associations	1.0	1.34926
GTEX-X638-0426-SM-47JY2	GTEx Tissue Sample Gene Expression Profiles	1.0	0.967965
urinary tract	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.06083
astrocytoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.072542
translation	GeneRIF Biological Term Annotations	1.0	null
spinal cord	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.055895
SNU407	CCLE Cell Line Gene CNV Profiles	1.0	1.58214
H3K4me1_limb_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
coincides	GeneRIF Biological Term Annotations	1.0	null
reductase	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_fibroblast of dermis_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
USF1_ECC-1_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KMS-26	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.889424
cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.13205
uterus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.564035
GTEX-R55D-0008-SM-48FEV	GTEx Tissue Sample Gene Expression Profiles	1.0	1.05842
functions	GeneRIF Biological Term Annotations	1.0	null
oxidoreductase	GeneRIF Biological Term Annotations	1.0	null
HUH-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.93324
MM.1S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.214
H3K4me1_placenta_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
19895320-Table2	GeneSigDB Published Gene Signatures	1.0	null
hypertrophy	GeneRIF Biological Term Annotations	1.0	null
CAL-148	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.857217
H3K4me3_embryonic fibroblast_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
pancreatic cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.067443
RBBP5_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
OCI-AML2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03199
zeste	GeneRIF Biological Term Annotations	1.0	null
hepatoblastoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.497321
H4K5ac_H1	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
bone cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.080981
GTEX-UTHO-0008-SM-4JBID	GTEx Tissue Sample Gene Expression Profiles	1.0	1.19465
why	GeneRIF Biological Term Annotations	1.0	null
PANC 08.13	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.835371
GTEX-SN8G-0008-SM-4DM4X	GTEx Tissue Sample Gene Expression Profiles	1.0	0.916235
myoblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.171548
differentiation	GeneRIF Biological Term Annotations	1.0	null
GTEX-XUJ4-0226-SM-4BOP8	GTEx Tissue Sample Gene Expression Profiles	1.0	1.37436
pten	GeneRIF Biological Term Annotations	1.0	null
induction	GeneRIF Biological Term Annotations	1.0	null
vascular endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.062596
GTEX-PX3G-1426-SM-48U1J	GTEx Tissue Sample Gene Expression Profiles	1.0	0.869024
u2-os cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.214388
Cognition Disorders	CTD Gene-Disease Associations	1.0	1.05972
20448109-Table1a	GeneSigDB Published Gene Signatures	1.0	null
Proteinuria	CTD Gene-Disease Associations	1.0	1.19737
DU4475	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.17882
hematopoietic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051272
transferase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.060191
membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.043955
H3K4me3_SK-N-SH_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
pcg protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.264946
GTEX-XMK1-0008-SM-4GICF	GTEx Tissue Sample Gene Expression Profiles	1.0	1.11564
Hyperglycemia	CTD Gene-Disease Associations	1.0	1.13552
cellfree	GeneRIF Biological Term Annotations	1.0	null
colon	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.108676
POLR2AphosphoS5_SK-N-MC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
germ cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.155466
H3K4me1_embryonic fibroblast_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
fgfr1	GeneRIF Biological Term Annotations	1.0	null
carcinogenesis	GeneRIF Biological Term Annotations	1.0	null
a2a	GeneRIF Biological Term Annotations	1.0	null
offer	GeneRIF Biological Term Annotations	1.0	null
19895320-Table1	GeneSigDB Published Gene Signatures	1.0	null
eye disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.052535
whole body	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.00152
Inflammation	CTD Gene-Disease Associations	1.0	1.73758
GTEX-X62O-0008-SM-46MU5	GTEx Tissue Sample Gene Expression Profiles	1.0	1.15505
SW 480	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.86383
leukocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.232039
H3K4me3_cardiac muscle cell_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
establishing	GeneRIF Biological Term Annotations	1.0	null
MOLP8	CCLE Cell Line Gene CNV Profiles	1.0	1.62924
endothelial	GeneRIF Biological Term Annotations	1.0	null
osteosarcoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.228497
OVKATE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.214
regulate	GeneRIF Biological Term Annotations	1.0	null
GTEX-VJYA-0226-SM-4KL1Q	GTEx Tissue Sample Gene Expression Profiles	1.0	0.871895
U266B1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02575
GTEX-TMMY-0008-SM-4DXU3	GTEx Tissue Sample Gene Expression Profiles	1.0	1.08868
SCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.42785
neuroblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.058173
carbohydrate metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.070244
rna	GeneRIF Biological Term Annotations	1.0	null
bone	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.073419
GTEX-U4B1-0008-SM-4DXUW	GTEx Tissue Sample Gene Expression Profiles	1.0	0.873263
scleral disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.499231
H3K4me3_fibroblast of pulmonary artery_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
GTEX-X88G-0008-SM-47JWN	GTEx Tissue Sample Gene Expression Profiles	1.0	0.881583
PANC 04.03	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.24696
sensitivity	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_fibroblast of pulmonary artery_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
GTEX-Q2AH-0008-SM-48U2J	GTEx Tissue Sample Gene Expression Profiles	1.0	1.0017
GTEX-QEG4-0008-SM-48TYZ	GTEx Tissue Sample Gene Expression Profiles	1.0	1.08769
reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.516497
rectal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.364139
H3K4me1_lung_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
stimulate	GeneRIF Biological Term Annotations	1.0	null
NCI-H1882	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.22695
H3K4me3_fibroblast of upper leg skin_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
CJM	CCLE Cell Line Gene CNV Profiles	-1.0	-1.57274
GTEX-OIZI-0008-SM-2XCFD	GTEx Tissue Sample Gene Expression Profiles	1.0	1.14083
trunk	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054582
GTEX-XBED-0008-SM-47JWO	GTEx Tissue Sample Gene Expression Profiles	1.0	1.32514
GTEX-T6MN-0008-SM-4DM7H	GTEx Tissue Sample Gene Expression Profiles	1.0	1.3347
ht-29 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.227186
FOXP2_SK-N-MC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
isoflurane	GeneRIF Biological Term Annotations	1.0	null
vascular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.268482
GTEX-TSE9-0008-SM-4DXT8	GTEx Tissue Sample Gene Expression Profiles	1.0	1.35694
mediated	GeneRIF Biological Term Annotations	1.0	null
GTEX-S3XE-0008-SM-3NM8O	GTEx Tissue Sample Gene Expression Profiles	1.0	1.41648
GTEX-U3ZN-0008-SM-4DXTL	GTEx Tissue Sample Gene Expression Profiles	1.0	1.19959
umbilical	GeneRIF Biological Term Annotations	1.0	null
SW1271	CCLE Cell Line Gene CNV Profiles	-1.0	-1.74198
glioblastoma	GeneRIF Biological Term Annotations	1.0	null
GTEX-T6MO-0008-SM-4DM6T	GTEx Tissue Sample Gene Expression Profiles	1.0	1.13493
H3K4me3_foreskin fibroblast_hg19_3	ENCODE Histone Modification Site Profiles	1.0	null
birth	GeneRIF Biological Term Annotations	1.0	null
GTEX-QDVJ-0008-SM-48U2E	GTEx Tissue Sample Gene Expression Profiles	1.0	1.23585
brain cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.071833
GTEX-S95S-0008-SM-4AT5M	GTEx Tissue Sample Gene Expression Profiles	1.0	1.80035
membrane part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.044324
H3K4me3_cardiac mesoderm_hg19_7	ENCODE Histone Modification Site Profiles	1.0	null
cervical cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.531089
Prostatic Neoplasms	CTD Gene-Disease Associations	1.0	1.11877
disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.236312
GTEX-OIZH-0926-SM-48TBR	GTEx Tissue Sample Gene Expression Profiles	1.0	0.885531
urinary system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.061178
enamel organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.189663
TM31	CCLE Cell Line Gene CNV Profiles	-1.0	-1.6352
SKMEL31	CCLE Cell Line Gene CNV Profiles	-1.0	-2.15572
head	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.058422
human aortic endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.239307
RERF-LC-KJ	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.25013
synovial sarcoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.174617
neck	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.066313
epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.085422
explanation	GeneRIF Biological Term Annotations	1.0	null
early	GeneRIF Biological Term Annotations	1.0	null
GTEX-WEY5-0726-SM-4LMID	GTEx Tissue Sample Gene Expression Profiles	1.0	0.854911
HCC78	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.846413
colorectal cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.36526
knockdown	GeneRIF Biological Term Annotations	1.0	null
FOS	ENCODE Transcription Factor Targets	1.0	null
mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.059003
nitric	GeneRIF Biological Term Annotations	1.0	null
H3K27me3_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
level	GeneRIF Biological Term Annotations	1.0	null
oncogenic	GeneRIF Biological Term Annotations	1.0	null
prognosis	GeneRIF Biological Term Annotations	1.0	null
eye	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.075324
GTEX-XPT6-0008-SM-4B64Q	GTEx Tissue Sample Gene Expression Profiles	1.0	1.30323
Carcinoma, Hepatocellular	CTD Gene-Disease Associations	1.0	1.50248
asf1b	GeneRIF Biological Term Annotations	1.0	null
NFE2_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H1568	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.834519
liver disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.090278
pappa	GeneRIF Biological Term Annotations	1.0	null
G96	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.49273
GTEX-QDVN-0526-SM-48TZ4	GTEx Tissue Sample Gene Expression Profiles	1.0	0.882313
bone cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.221755
USF1	ENCODE Transcription Factor Targets	1.0	null
H3K4me1_heart_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
GTEX-PWN1-0008-SM-48TEA	GTEx Tissue Sample Gene Expression Profiles	1.0	1.25256
H3K36me3_Fetal Lung	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
ISTMES1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.96255
bile duct adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.108235
GTEX-S4UY-1226-SM-4AD51	GTEx Tissue Sample Gene Expression Profiles	1.0	1.14192
H2AFZ_skeletal muscle myoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GTEX-S33H-0008-SM-4AD6C	GTEx Tissue Sample Gene Expression Profiles	1.0	1.34823
blood vessel	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.067579
roles	GeneRIF Biological Term Annotations	1.0	null
COV413B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.94563
non-small cell lung cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.060815
GTEX-XBED-1626-SM-47JYN	GTEx Tissue Sample Gene Expression Profiles	1.0	1.21561
hepatomaderived	GeneRIF Biological Term Annotations	1.0	null
CAL-120	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.39713
tensin	GeneRIF Biological Term Annotations	1.0	null
angiogenesis	GeneRIF Biological Term Annotations	1.0	null
studied	GeneRIF Biological Term Annotations	1.0	null
GTEX-T6MO-1526-SM-4DM57	GTEx Tissue Sample Gene Expression Profiles	1.0	1.08838
20103675-Table1b	GeneSigDB Published Gene Signatures	1.0	null
GTEX-S4P3-0008-SM-3NM8R	GTEx Tissue Sample Gene Expression Profiles	1.0	0.901052
POLR2AphosphoS5_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hgc-27 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.7105
presence	GeneRIF Biological Term Annotations	1.0	null
increase	GeneRIF Biological Term Annotations	1.0	null
GTEX-WOFM-0726-SM-3MJF8	GTEx Tissue Sample Gene Expression Profiles	1.0	0.960525
colonic cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.11339
end	GeneRIF Biological Term Annotations	1.0	null