association	dataset	threshold value	standardized value
one	GeneRIF Biological Term Annotations	1.0	null
reexpressed	GeneRIF Biological Term Annotations	1.0	null
transfer	GeneRIF Biological Term Annotations	1.0	null
TP63	ChEA Transcription Factor Targets	1.0	null
solid	GeneRIF Biological Term Annotations	1.0	null
Congenital Abnormalities	CTD Gene-Disease Associations	1.0	1.06661
pattern	GeneRIF Biological Term Annotations	1.0	null
lymph	GeneRIF Biological Term Annotations	1.0	null
programs	GeneRIF Biological Term Annotations	1.0	null
partly	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
C3A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08428
HCC1263	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22402
viral	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_endothelial cell of umbilical vein_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
emerging	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
tgfbeta	GeneRIF Biological Term Annotations	1.0	null
Hyperalgesia	CTD Gene-Disease Associations	1.0	1.15122
stressinduced	GeneRIF Biological Term Annotations	1.0	null
exhibited	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_ES-E14_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
improve	GeneRIF Biological Term Annotations	1.0	null
decreased pulmonary respiratory rate	MGI Mouse Phenotype Associations 2023	1.0	null
KO52	CCLE Cell Line Gene CNV Profiles	1.0	1.45931
lyar	GeneRIF Biological Term Annotations	1.0	null
mirna	GeneRIF Biological Term Annotations	1.0	null
HEB	MotifMap Predicted Transcription Factor Targets	1.0	null
required	GeneRIF Biological Term Annotations	1.0	null
carriers	GeneRIF Biological Term Annotations	1.0	null
e2f3	GeneRIF Biological Term Annotations	1.0	null
gsk3	GeneRIF Biological Term Annotations	1.0	null
heart	GeneRIF Biological Term Annotations	1.0	null
RAJI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.24358
based	GeneRIF Biological Term Annotations	1.0	null
cytodifferentiation	GeneRIF Biological Term Annotations	1.0	null
cascades	GeneRIF Biological Term Annotations	1.0	null
l1cam	GeneRIF Biological Term Annotations	1.0	null
assays	GeneRIF Biological Term Annotations	1.0	null
choriocarcinoma	GeneRIF Biological Term Annotations	1.0	null
characteristics	GeneRIF Biological Term Annotations	1.0	null
lung	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_keratinocyte_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TCF3	ENCODE Transcription Factor Targets	1.0	null
k562	GeneRIF Biological Term Annotations	1.0	null
clinicopathologic	GeneRIF Biological Term Annotations	1.0	null
mesenchymal	GeneRIF Biological Term Annotations	1.0	null
identifies	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_testis_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
RBBP5	ENCODE Transcription Factor Targets	1.0	null
Prostatic Neoplasms	CTD Gene-Disease Associations	1.0	1.03345
mir34a	GeneRIF Biological Term Annotations	1.0	null
Pain	CTD Gene-Disease Associations	1.0	1.03641
regulators	GeneRIF Biological Term Annotations	1.0	null
KYSE-150	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.18413
cardiomyocyte	GeneRIF Biological Term Annotations	1.0	null
Edema	CTD Gene-Disease Associations	1.0	1.2639
complete	GeneRIF Biological Term Annotations	1.0	null
transactivation	GeneRIF Biological Term Annotations	1.0	null
carrying	GeneRIF Biological Term Annotations	1.0	null
NCI-H209	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.79716
chinese	GeneRIF Biological Term Annotations	1.0	null
investigation	GeneRIF Biological Term Annotations	1.0	null
aimed	GeneRIF Biological Term Annotations	1.0	null
COLO 699	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15895
Weight Loss	CTD Gene-Disease Associations	1.0	1.58374
Adenocarcinoma	CTD Gene-Disease Associations	1.0	1.31837
participates	GeneRIF Biological Term Annotations	1.0	null
nervous system phenotype	MPO Gene-Phenotype Associations	1.0	null
csc	GeneRIF Biological Term Annotations	1.0	null
EP300_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
proapoptotic	GeneRIF Biological Term Annotations	1.0	null
MITF	ChEA Transcription Factor Targets	1.0	null
all	GeneRIF Biological Term Annotations	1.0	null
impaired	GeneRIF Biological Term Annotations	1.0	null
sequesters	GeneRIF Biological Term Annotations	1.0	null
tumorsuppressing	GeneRIF Biological Term Annotations	1.0	null
possibly	GeneRIF Biological Term Annotations	1.0	null
Kidney Diseases	CTD Gene-Disease Associations	1.0	1.46515
miR-targeted genes in epithelium - TarBase(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
POLR2AphosphoS2_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K36me3_ES-E14_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SW 1573	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33041
length	GeneRIF Biological Term Annotations	1.0	null
cervical	GeneRIF Biological Term Annotations	1.0	null
cyp3a4	GeneRIF Biological Term Annotations	1.0	null
indicating	GeneRIF Biological Term Annotations	1.0	null
cebpalpha	GeneRIF Biological Term Annotations	1.0	null
elevation	GeneRIF Biological Term Annotations	1.0	null
forming	GeneRIF Biological Term Annotations	1.0	null
MYOD1_myocyte_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cancers	GeneRIF Biological Term Annotations	1.0	null
become	GeneRIF Biological Term Annotations	1.0	null
cardiovascular	GeneRIF Biological Term Annotations	1.0	null
targets	GeneRIF Biological Term Annotations	1.0	null
population	GeneRIF Biological Term Annotations	1.0	null
diagnostic	GeneRIF Biological Term Annotations	1.0	null
invasiveness	GeneRIF Biological Term Annotations	1.0	null
into	GeneRIF Biological Term Annotations	1.0	null
sites	GeneRIF Biological Term Annotations	1.0	null
acquired	GeneRIF Biological Term Annotations	1.0	null
presented	GeneRIF Biological Term Annotations	1.0	null
POLR2AphosphoS5_U-87 MG_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
clinical	GeneRIF Biological Term Annotations	1.0	null
CAPAN-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.950994
CHP-212	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.67164
H3K36me3_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me3_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
link	GeneRIF Biological Term Annotations	1.0	null
H3K27me3_megakaryocyte_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
transcripts	GeneRIF Biological Term Annotations	1.0	null
studies	GeneRIF Biological Term Annotations	1.0	null
dld1	GeneRIF Biological Term Annotations	1.0	null
Pancreatic Neoplasms	CTD Gene-Disease Associations	1.0	1.44355
future	GeneRIF Biological Term Annotations	1.0	null
TCF12_myocyte_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K36me3_endothelial cell of umbilical vein_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
preclinical	GeneRIF Biological Term Annotations	1.0	null
hepatocellular	GeneRIF Biological Term Annotations	1.0	null
prior	GeneRIF Biological Term Annotations	1.0	null
knockdown	GeneRIF Biological Term Annotations	1.0	null
deletions	GeneRIF Biological Term Annotations	1.0	null
chemosensitivity	GeneRIF Biological Term Annotations	1.0	null
immunity	GeneRIF Biological Term Annotations	1.0	null
matrix	GeneRIF Biological Term Annotations	1.0	null
colon	GeneRIF Biological Term Annotations	1.0	null
negative	GeneRIF Biological Term Annotations	1.0	null
MYOG_myocyte_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NURR1	MotifMap Predicted Transcription Factor Targets	1.0	null
manner	GeneRIF Biological Term Annotations	1.0	null
transitional	GeneRIF Biological Term Annotations	1.0	null
SAP30_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27ac_ES-E14_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
threshold	GeneRIF Biological Term Annotations	1.0	null
transcription	GeneRIF Biological Term Annotations	1.0	null
prostate	GeneRIF Biological Term Annotations	1.0	null
NCI-N417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.45604
compared	GeneRIF Biological Term Annotations	1.0	null
regulate	GeneRIF Biological Term Annotations	1.0	null
MYOG_myocyte_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
occurrence	GeneRIF Biological Term Annotations	1.0	null
had	GeneRIF Biological Term Annotations	1.0	null
cyp2c19	GeneRIF Biological Term Annotations	1.0	null
functions	GeneRIF Biological Term Annotations	1.0	null
SKNAS	CCLE Cell Line Gene CNV Profiles	-1.0	-1.41774
rpe	GeneRIF Biological Term Annotations	1.0	null
before	GeneRIF Biological Term Annotations	1.0	null
sinonasal	GeneRIF Biological Term Annotations	1.0	null
H3K9me1_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
H3K27me3_MEL cell line_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
suppression	GeneRIF Biological Term Annotations	1.0	null
CPC-N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.7514
POLR2A_endothelial cell of umbilical vein_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
overexpressed	GeneRIF Biological Term Annotations	1.0	null
Inflammation	CTD Gene-Disease Associations	1.0	2.88009
outcomes	GeneRIF Biological Term Annotations	1.0	null
viability	GeneRIF Biological Term Annotations	1.0	null
mycmediated	GeneRIF Biological Term Annotations	1.0	null
NCIH1385	CCLE Cell Line Gene CNV Profiles	-1.0	-1.87621
CEBPB_A549_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Hypotension	CTD Gene-Disease Associations	1.0	1.03864
H3K4me1_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
types	GeneRIF Biological Term Annotations	1.0	null
medulloblastoma	GeneRIF Biological Term Annotations	1.0	null
epha5	GeneRIF Biological Term Annotations	1.0	null
HCC2279	CCLE Cell Line Gene CNV Profiles	-1.0	-1.69062
NCI-H510A	COSMIC Cell Line Gene CNV Profiles	1.0	2.15402
promyelocytic	GeneRIF Biological Term Annotations	1.0	null
here	GeneRIF Biological Term Annotations	1.0	null
sequences	GeneRIF Biological Term Annotations	1.0	null
against	GeneRIF Biological Term Annotations	1.0	null
neoplasms	GeneRIF Biological Term Annotations	1.0	null
elongate	GeneRIF Biological Term Annotations	1.0	null
coordinately	GeneRIF Biological Term Annotations	1.0	null
RUNX2-22187159-PCA-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
restored	GeneRIF Biological Term Annotations	1.0	null
colony	GeneRIF Biological Term Annotations	1.0	null
rs4938723	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_erythroblast_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
suppresses	GeneRIF Biological Term Annotations	1.0	null
placenta	GeneRIF Biological Term Annotations	1.0	null
Cardiovascular Diseases	CTD Gene-Disease Associations	1.0	1.21468
NCI-H446	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02016
decreasing	GeneRIF Biological Term Annotations	1.0	null
POLR2AphosphoS5_G1E_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EZH2_keratinocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
tyrosine	GeneRIF Biological Term Annotations	1.0	null
EZH2_mammary epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
variant	GeneRIF Biological Term Annotations	1.0	null
prediction	GeneRIF Biological Term Annotations	1.0	null
loop	GeneRIF Biological Term Annotations	1.0	null
mir34abinding	GeneRIF Biological Term Annotations	1.0	null
synthesis	GeneRIF Biological Term Annotations	1.0	null
oncogenesis	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_Adult Kidney	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
POLR2AphosphoS5_GM12891_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
renal	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_placenta_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
transcriptional	GeneRIF Biological Term Annotations	1.0	null
modulates	GeneRIF Biological Term Annotations	1.0	null
condensation	GeneRIF Biological Term Annotations	1.0	null
manipulating	GeneRIF Biological Term Annotations	1.0	null
K-562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15895
embryonic	GeneRIF Biological Term Annotations	1.0	null
glioblastoma	GeneRIF Biological Term Annotations	1.0	null
NCI-H196	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08428
H3K36me3_GM12878_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Hemorrhage	CTD Gene-Disease Associations	1.0	1.24623
H3K9ac_MEL cell line_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
apoptosis	GeneRIF Biological Term Annotations	1.0	null
methylationassociated	GeneRIF Biological Term Annotations	1.0	null
correlation	GeneRIF Biological Term Annotations	1.0	null
SUPT11	CCLE Cell Line Gene CNV Profiles	1.0	1.73816
tumors	GeneRIF Biological Term Annotations	1.0	null
mir194	GeneRIF Biological Term Annotations	1.0	null
POLR2AphosphoS5_GM12892_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mir15a16	GeneRIF Biological Term Annotations	1.0	null
H3K9ac_Brain Mid Frontal Lobe	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
abnormal gait	MGI Mouse Phenotype Associations 2023	1.0	null
papillary	GeneRIF Biological Term Annotations	1.0	null
mir34ainduced	GeneRIF Biological Term Annotations	1.0	null
tgfbetamir34accl22	GeneRIF Biological Term Annotations	1.0	null
hmsc	GeneRIF Biological Term Annotations	1.0	null
H3K27ac_fibroblast of lung_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
emt	GeneRIF Biological Term Annotations	1.0	null
telomere	GeneRIF Biological Term Annotations	1.0	null
A-498	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26115
Non-alcoholic Fatty Liver Disease	CTD Gene-Disease Associations	1.0	1.6606
tp53	GeneRIF Biological Term Annotations	1.0	null
TP53	ChEA Transcription Factor Targets	1.0	null
H3K36me3_keratinocyte_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mir175p	GeneRIF Biological Term Annotations	1.0	null
Disease Models, Animal	CTD Gene-Disease Associations	1.0	1.61598
acute	GeneRIF Biological Term Annotations	1.0	null
invasion	GeneRIF Biological Term Annotations	1.0	null
seed	GeneRIF Biological Term Annotations	1.0	null
CORL88	CCLE Cell Line Gene CNV Profiles	1.0	2.76047
mir34s	GeneRIF Biological Term Annotations	1.0	null
mir122	GeneRIF Biological Term Annotations	1.0	null
miR-targeted genes in lymphocytes - TarBase(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
axl	GeneRIF Biological Term Annotations	1.0	null
highgrade	GeneRIF Biological Term Annotations	1.0	null
NCI-H28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.28955
Learning Disorders	CTD Gene-Disease Associations	1.0	1.24275
promotes	GeneRIF Biological Term Annotations	1.0	null
studied	GeneRIF Biological Term Annotations	1.0	null
phve	GeneRIF Biological Term Annotations	1.0	null
following	GeneRIF Biological Term Annotations	1.0	null
IMR-32	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.89172
H3K9ac_Brain Hippocampus Middle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
abcf2	GeneRIF Biological Term Annotations	1.0	null
elimination	GeneRIF Biological Term Annotations	1.0	null
Hepatomegaly	CTD Gene-Disease Associations	1.0	1.37987
than	GeneRIF Biological Term Annotations	1.0	null
diffuse	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_fibroblast of lung_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
USF2	ENCODE Transcription Factor Targets	1.0	null
H3K4me1_iPS DF 19.11	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
HBL-100	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09305
Drug-Related Side Effects and Adverse Reactions	CTD Gene-Disease Associations	1.0	1.54864
abnormal cell proliferation	MPO Gene-Phenotype Associations	1.0	null
nox2	GeneRIF Biological Term Annotations	1.0	null
hpv16	GeneRIF Biological Term Annotations	1.0	null
silencing	GeneRIF Biological Term Annotations	1.0	null
responses	GeneRIF Biological Term Annotations	1.0	null
rbdependent	GeneRIF Biological Term Annotations	1.0	null
Breast Neoplasms	CTD Gene-Disease Associations	1.0	1.41091
sirt1	GeneRIF Biological Term Annotations	1.0	null
evaluated	GeneRIF Biological Term Annotations	1.0	null
proof	GeneRIF Biological Term Annotations	1.0	null
papillomavirus	GeneRIF Biological Term Annotations	1.0	null
suppressive	GeneRIF Biological Term Annotations	1.0	null
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
prosurvival	GeneRIF Biological Term Annotations	1.0	null
thus	GeneRIF Biological Term Annotations	1.0	null
mutability	GeneRIF Biological Term Annotations	1.0	null
potent	GeneRIF Biological Term Annotations	1.0	null
mir34atlr4	GeneRIF Biological Term Annotations	1.0	null
sirnas	GeneRIF Biological Term Annotations	1.0	null
G111	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23214
putative	GeneRIF Biological Term Annotations	1.0	null
myeloproliferative	GeneRIF Biological Term Annotations	1.0	null
abnormal neuron proliferation	MPO Gene-Phenotype Associations	1.0	null
benign	GeneRIF Biological Term Annotations	1.0	null
cdk6	GeneRIF Biological Term Annotations	1.0	null
mirna34a	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
aided	GeneRIF Biological Term Annotations	1.0	null
abnormal neuronal precursor proliferation	MPO Gene-Phenotype Associations	1.0	null
broad	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_erythroblast_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
transplantation	GeneRIF Biological Term Annotations	1.0	null
Lung Neoplasms	HuGE Navigator Gene-Phenotype Associations	1.0	null
JUND_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormal neuronal precursor proliferation	MGI Mouse Phenotype Associations 2023	1.0	null
setting	GeneRIF Biological Term Annotations	1.0	null
failure	GeneRIF Biological Term Annotations	1.0	null
independently	GeneRIF Biological Term Annotations	1.0	null
elevates	GeneRIF Biological Term Annotations	1.0	null
arrest	GeneRIF Biological Term Annotations	1.0	null
Breast Neoplasms	HuGE Navigator Gene-Phenotype Associations	1.0	null
abnormal cell physiology	MPO Gene-Phenotype Associations	1.0	null
microrna34	GeneRIF Biological Term Annotations	1.0	null
metastasis	GeneRIF Biological Term Annotations	1.0	null
squamous	GeneRIF Biological Term Annotations	1.0	null
marrow	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_Duodenum Mucosa	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
radiotherapeutic	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_Neurosphere Cultured Cells Cortex Derived	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
H3K4me3_fibroblast of gingiva_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
miR-targeted genes in muscle cell - TarBase(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
ZNF25_01_319	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.78718
indirectly	GeneRIF Biological Term Annotations	1.0	null
osteosarcomas	GeneRIF Biological Term Annotations	1.0	null
process	GeneRIF Biological Term Annotations	1.0	null
HEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.98639
lines	GeneRIF Biological Term Annotations	1.0	null
wnt1	GeneRIF Biological Term Annotations	1.0	null
lmtk3	GeneRIF Biological Term Annotations	1.0	null
pi3kaktsurvivin	GeneRIF Biological Term Annotations	1.0	null
SCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.982888
HDAC2_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hypermethylation	GeneRIF Biological Term Annotations	1.0	null
risk	GeneRIF Biological Term Annotations	1.0	null
mir34amediated	GeneRIF Biological Term Annotations	1.0	null
betacatenin	GeneRIF Biological Term Annotations	1.0	null
20068076-SuppTable11a	GeneSigDB Published Gene Signatures	1.0	null
pancreatic	GeneRIF Biological Term Annotations	1.0	null
enhance	GeneRIF Biological Term Annotations	1.0	null
subsequent	GeneRIF Biological Term Annotations	1.0	null
decreased grip strength	MGI Mouse Phenotype Associations 2023	1.0	null
encoding	GeneRIF Biological Term Annotations	1.0	null
murine	GeneRIF Biological Term Annotations	1.0	null
rs6505162	GeneRIF Biological Term Annotations	1.0	null
fut8	GeneRIF Biological Term Annotations	1.0	null
RCM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13581
partially	GeneRIF Biological Term Annotations	1.0	null
Metastatic brain tumor(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
pkb	GeneRIF Biological Term Annotations	1.0	null
potentiated	GeneRIF Biological Term Annotations	1.0	null
rhoa	GeneRIF Biological Term Annotations	1.0	null
migration	GeneRIF Biological Term Annotations	1.0	null
bcll	GeneRIF Biological Term Annotations	1.0	null
nhl	GeneRIF Biological Term Annotations	1.0	null
alg13	GeneRIF Biological Term Annotations	1.0	null
biological	GeneRIF Biological Term Annotations	1.0	null
mirs	GeneRIF Biological Term Annotations	1.0	null
modulation	GeneRIF Biological Term Annotations	1.0	null
puma	GeneRIF Biological Term Annotations	1.0	null
u251	GeneRIF Biological Term Annotations	1.0	null
19924232-TableS1	GeneSigDB Published Gene Signatures	1.0	null
glucose	GeneRIF Biological Term Annotations	1.0	null
ductal	GeneRIF Biological Term Annotations	1.0	null
detected	GeneRIF Biological Term Annotations	1.0	null
substitute	GeneRIF Biological Term Annotations	1.0	null
induce	GeneRIF Biological Term Annotations	1.0	null
deregulation	GeneRIF Biological Term Annotations	1.0	null
independent	GeneRIF Biological Term Annotations	1.0	null
Fatty Liver, Alcoholic	CTD Gene-Disease Associations	1.0	1.13449
promising	GeneRIF Biological Term Annotations	1.0	null
WSU-NHL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.70923
mir199ab	GeneRIF Biological Term Annotations	1.0	null
demonstrate	GeneRIF Biological Term Annotations	1.0	null
MAFK	ENCODE Transcription Factor Targets	1.0	null
H3K36me3_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
possess	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_fibroblast of dermis_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
EP300	ENCODE Transcription Factor Targets	1.0	null
EKVX	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.881726
nfkappab	GeneRIF Biological Term Annotations	1.0	null
NIH:OVCAR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.9046
H3K27ac_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
DMS 454	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.52943
NCIH292	CCLE Cell Line Gene CNV Profiles	-1.0	-1.47869
C3A	CCLE Cell Line Gene CNV Profiles	1.0	1.9562
efficacy	GeneRIF Biological Term Annotations	1.0	null
ebv	GeneRIF Biological Term Annotations	1.0	null
Liver Cirrhosis	CTD Gene-Disease Associations	1.0	1.66081
POLR2A_MEL cell line_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
upregulating	GeneRIF Biological Term Annotations	1.0	null
Chromosome Aberrations	CTD Gene-Disease Associations	1.0	1.18293
erlotinib	GeneRIF Biological Term Annotations	1.0	null
although	GeneRIF Biological Term Annotations	1.0	null
strategy	GeneRIF Biological Term Annotations	1.0	null
either	GeneRIF Biological Term Annotations	1.0	null
thyroid	GeneRIF Biological Term Annotations	1.0	null
integrated	GeneRIF Biological Term Annotations	1.0	null
Cardiomegaly	CTD Gene-Disease Associations	1.0	1.24966
notch	GeneRIF Biological Term Annotations	1.0	null
alteration	GeneRIF Biological Term Annotations	1.0	null
wildtype	GeneRIF Biological Term Annotations	1.0	null
Carcinoma	CTD Gene-Disease Associations	1.0	1.18193
Melanoma	CTD Gene-Disease Associations	1.0	1.2772
p53dependent	GeneRIF Biological Term Annotations	1.0	null
worse	GeneRIF Biological Term Annotations	1.0	null
hsf1	GeneRIF Biological Term Annotations	1.0	null
KDM5B_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
directly	GeneRIF Biological Term Annotations	1.0	null
research	GeneRIF Biological Term Annotations	1.0	null
501A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.858598
KPNYN	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39408
highly	GeneRIF Biological Term Annotations	1.0	null
exclusiveness	GeneRIF Biological Term Annotations	1.0	null
uses	GeneRIF Biological Term Annotations	1.0	null
analyses	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_BJ_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
modulator	GeneRIF Biological Term Annotations	1.0	null
Carcinoma, Squamous Cell	CTD Gene-Disease Associations	1.0	1.30512
only	GeneRIF Biological Term Annotations	1.0	null
osteosarcoma	GeneRIF Biological Term Annotations	1.0	null
transition	GeneRIF Biological Term Annotations	1.0	null
zeb1	GeneRIF Biological Term Annotations	1.0	null
hypermethylated	GeneRIF Biological Term Annotations	1.0	null
HCC202	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.881726
tubular	GeneRIF Biological Term Annotations	1.0	null
carcinogenesis	GeneRIF Biological Term Annotations	1.0	null
closely	GeneRIF Biological Term Annotations	1.0	null
H3K9ac_Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
coexpression	GeneRIF Biological Term Annotations	1.0	null
alpha	GeneRIF Biological Term Annotations	1.0	null
enzyme	GeneRIF Biological Term Annotations	1.0	null
EFM-192C	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.880883
well	GeneRIF Biological Term Annotations	1.0	null
frame	GeneRIF Biological Term Annotations	1.0	null
messenger	GeneRIF Biological Term Annotations	1.0	null
SKMEL28	CCLE Cell Line Gene CNV Profiles	1.0	1.56004
Urinary Bladder Neoplasms	CTD Gene-Disease Associations	1.0	1.2137
offer	GeneRIF Biological Term Annotations	1.0	null
HT-55	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.41757
seven	GeneRIF Biological Term Annotations	1.0	null
transitions	GeneRIF Biological Term Annotations	1.0	null
least	GeneRIF Biological Term Annotations	1.0	null
H3K9ac_fibroblast of dermis_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
mir	GeneRIF Biological Term Annotations	1.0	null
therapeutic	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
within	GeneRIF Biological Term Annotations	1.0	null
LS1034	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09238
akt	GeneRIF Biological Term Annotations	1.0	null
p53	GeneRIF Biological Term Annotations	1.0	null
system	GeneRIF Biological Term Annotations	1.0	null
concept	GeneRIF Biological Term Annotations	1.0	null
goal	GeneRIF Biological Term Annotations	1.0	null
adenocarcinoma	GeneRIF Biological Term Annotations	1.0	null
Pre-NOTCH Transcription and Translation	Reactome Pathways 2014	1.0	null
cd44hi	GeneRIF Biological Term Annotations	1.0	null
rna	GeneRIF Biological Term Annotations	1.0	null
il6rstat3mir34a	GeneRIF Biological Term Annotations	1.0	null
STAT3	MotifMap Predicted Transcription Factor Targets	1.0	null
mirnas	GeneRIF Biological Term Annotations	1.0	null
mediated	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_bronchial epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me2_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
coregulate	GeneRIF Biological Term Annotations	1.0	null
recently	GeneRIF Biological Term Annotations	1.0	null
acts	GeneRIF Biological Term Annotations	1.0	null
impairs	GeneRIF Biological Term Annotations	1.0	null
Liver Neoplasms	CTD Gene-Disease Associations	1.0	1.73818
HCC1599	CCLE Cell Line Gene CNV Profiles	-1.0	-2.03961
MAFK_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FADU	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.982111
reduces	GeneRIF Biological Term Annotations	1.0	null
EP300_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
reduced	GeneRIF Biological Term Annotations	1.0	null
symptom	GeneRIF Biological Term Annotations	1.0	null
no abnormal phenotype detected	MPO Gene-Phenotype Associations	1.0	null
abnormal nervous system physiology	MPO Gene-Phenotype Associations	1.0	null
Prenatal Exposure Delayed Effects	CTD Gene-Disease Associations	1.0	1.4567
H3K4me3_G1E-ER4_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
chemosensitization	GeneRIF Biological Term Annotations	1.0	null
retinoid	GeneRIF Biological Term Annotations	1.0	null
critically	GeneRIF Biological Term Annotations	1.0	null
SK-CO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.38776
malt	GeneRIF Biological Term Annotations	1.0	null
TBP_MEL cell line_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
irrespective	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_megakaryocyte_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
radiationinduced	GeneRIF Biological Term Annotations	1.0	null
eag1	GeneRIF Biological Term Annotations	1.0	null
instability	GeneRIF Biological Term Annotations	1.0	null
USF2_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
modulate	GeneRIF Biological Term Annotations	1.0	null
muscleinvasive	GeneRIF Biological Term Annotations	1.0	null
negatively	GeneRIF Biological Term Annotations	1.0	null
Ovarian Neoplasms	CTD Gene-Disease Associations	1.0	1.13552
FUOV1	CCLE Cell Line Gene CNV Profiles	1.0	1.67838
H3K4me1_small intestine_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
mir24	GeneRIF Biological Term Annotations	1.0	null
NCI-H2198	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.950994
NCI-H146	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.933046
genomic	GeneRIF Biological Term Annotations	1.0	null
NCI-H2795	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.6352
group	GeneRIF Biological Term Annotations	1.0	null
Ischemia	CTD Gene-Disease Associations	1.0	1.09226
site	GeneRIF Biological Term Annotations	1.0	null
HCC2279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.20922
affected	GeneRIF Biological Term Annotations	1.0	null
tgm2	GeneRIF Biological Term Annotations	1.0	null
hpv18	GeneRIF Biological Term Annotations	1.0	null
MEIS1	ChEA Transcription Factor Targets	1.0	null
pluripotency	GeneRIF Biological Term Annotations	1.0	null
choice	GeneRIF Biological Term Annotations	1.0	null
NCI-H1882	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.45373
OCILY19	CCLE Cell Line Gene CNV Profiles	-1.0	-1.66218
COLO668	CCLE Cell Line Gene CNV Profiles	1.0	2.09697
turn	GeneRIF Biological Term Annotations	1.0	null
myb	GeneRIF Biological Term Annotations	1.0	null
metabolism	GeneRIF Biological Term Annotations	1.0	null
laryngeal	GeneRIF Biological Term Annotations	1.0	null
SUZ12	ENCODE Transcription Factor Targets	1.0	null
Cataract	CTD Gene-Disease Associations	1.0	1.39813
approach	GeneRIF Biological Term Annotations	1.0	null
portal	GeneRIF Biological Term Annotations	1.0	null
grade	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_iPS DF 19.11	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
brain	GeneRIF Biological Term Annotations	1.0	null
Drug-Induced Liver Injury	CTD Gene-Disease Associations	1.0	2.15005
uveal	GeneRIF Biological Term Annotations	1.0	null
mir34c	GeneRIF Biological Term Annotations	1.0	null
targeted	GeneRIF Biological Term Annotations	1.0	null
MDA-MB-175-VII	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.52633
SUPHD1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.37991
Liver Cirrhosis, Experimental	CTD Gene-Disease Associations	1.0	1.08904
POLR2A_GM12891_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
xray	GeneRIF Biological Term Annotations	1.0	null
H3K27ac_placenta_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
profiles	GeneRIF Biological Term Annotations	1.0	null
MHH-ES-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.38671
tempers	GeneRIF Biological Term Annotations	1.0	null
cdf	GeneRIF Biological Term Annotations	1.0	null
neural	GeneRIF Biological Term Annotations	1.0	null
suppressor	GeneRIF Biological Term Annotations	1.0	null
senescence	GeneRIF Biological Term Annotations	1.0	null
OVCA 432	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.87893
noncoding	GeneRIF Biological Term Annotations	1.0	null
snail1	GeneRIF Biological Term Annotations	1.0	null
malignancy	GeneRIF Biological Term Annotations	1.0	null
cll	GeneRIF Biological Term Annotations	1.0	null
cirsiliol	GeneRIF Biological Term Annotations	1.0	null
monocytederived	GeneRIF Biological Term Annotations	1.0	null
HDAC1	ENCODE Transcription Factor Targets	1.0	null
predicts	GeneRIF Biological Term Annotations	1.0	null
a172	GeneRIF Biological Term Annotations	1.0	null
H2AFZ_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
open	GeneRIF Biological Term Annotations	1.0	null
point	GeneRIF Biological Term Annotations	1.0	null
rise	GeneRIF Biological Term Annotations	1.0	null
probably	GeneRIF Biological Term Annotations	1.0	null
suppressing	GeneRIF Biological Term Annotations	1.0	null
SIMA	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44439
CHP212	CCLE Cell Line Gene CNV Profiles	-1.0	-1.65212
phenotype	GeneRIF Biological Term Annotations	1.0	null
numerous	GeneRIF Biological Term Annotations	1.0	null
CEBPB_K562_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormalities	GeneRIF Biological Term Annotations	1.0	null
Glioma	CTD Gene-Disease Associations	1.0	1.08726
neuroblastoma	GeneRIF Biological Term Annotations	1.0	null
modulated	GeneRIF Biological Term Annotations	1.0	null
cd95	GeneRIF Biological Term Annotations	1.0	null
POLR2AphosphoS5_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H2AFZ_fibroblast of lung_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27ac_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
increased B cell number	MGI Mouse Phenotype Associations 2023	1.0	null
MYOD1	ENCODE Transcription Factor Targets	1.0	null
pediatric	GeneRIF Biological Term Annotations	1.0	null
controls	GeneRIF Biological Term Annotations	1.0	null
ectopic	GeneRIF Biological Term Annotations	1.0	null
Signaling by NOTCH	Reactome Pathways 2014	1.0	null
hbv	GeneRIF Biological Term Annotations	1.0	null
POLR2A_testis_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Uterine Cervical Neoplasms	CTD Gene-Disease Associations	1.0	1.27286
radioresistance	GeneRIF Biological Term Annotations	1.0	null
HDAC6	ENCODE Transcription Factor Targets	1.0	null
G122	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.982888
D-423MG	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.11641
crucial	GeneRIF Biological Term Annotations	1.0	null
tumorspecific	GeneRIF Biological Term Annotations	1.0	null
differentgrade	GeneRIF Biological Term Annotations	1.0	null
src	GeneRIF Biological Term Annotations	1.0	null
H3K27me3_megakaryocyte_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
jagged1	GeneRIF Biological Term Annotations	1.0	null
effects	GeneRIF Biological Term Annotations	1.0	null
ZNF384_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cmet	GeneRIF Biological Term Annotations	1.0	null
e2f	GeneRIF Biological Term Annotations	1.0	null
mirna34bc	GeneRIF Biological Term Annotations	1.0	null
increase	GeneRIF Biological Term Annotations	1.0	null
microrna	GeneRIF Biological Term Annotations	1.0	null
Nerve Degeneration	CTD Gene-Disease Associations	1.0	1.34869
H3K9ac_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
demonstrates	GeneRIF Biological Term Annotations	1.0	null
mir34b	GeneRIF Biological Term Annotations	1.0	null
CFPAC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0191
docetaxel	GeneRIF Biological Term Annotations	1.0	null
provided	GeneRIF Biological Term Annotations	1.0	null
lscc	GeneRIF Biological Term Annotations	1.0	null
H3K27ac_heart_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
cyclin	GeneRIF Biological Term Annotations	1.0	null
inherited	GeneRIF Biological Term Annotations	1.0	null
resection	GeneRIF Biological Term Annotations	1.0	null
COV413B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.36184
Liver Neoplasms, Experimental	CTD Gene-Disease Associations	1.0	2.88009
properties	GeneRIF Biological Term Annotations	1.0	null
ageing	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_small intestine_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
HCC1011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.982888
caused	GeneRIF Biological Term Annotations	1.0	null
enhancing	GeneRIF Biological Term Annotations	1.0	null
Vomiting	CTD Gene-Disease Associations	1.0	1.05089
POLR2A_olfactory bulb_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
malignant	GeneRIF Biological Term Annotations	1.0	null
CTCF_HeLa-S3_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
elevated	GeneRIF Biological Term Annotations	1.0	null
oct4	GeneRIF Biological Term Annotations	1.0	null
u87	GeneRIF Biological Term Annotations	1.0	null
impdh	GeneRIF Biological Term Annotations	1.0	null
H2AFZ_fibroblast of dermis_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
neck	GeneRIF Biological Term Annotations	1.0	null
SW 1417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.982888
cd44	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_endothelial cell of umbilical vein_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
POLR2AphosphoS2_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
nonsmallcell	GeneRIF Biological Term Annotations	1.0	null
Micronuclei, Chromosome-Defective	CTD Gene-Disease Associations	1.0	1.16467
products	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_CH12.LX_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
POLR2AphosphoS5_GM12891_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
members	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_Skeletal Muscle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
hcc	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
ZNF263	ENCODE Transcription Factor Targets	1.0	null
deleted	GeneRIF Biological Term Annotations	1.0	null
characteristic	GeneRIF Biological Term Annotations	1.0	null
Neoplasm Metastasis	CTD Gene-Disease Associations	1.0	1.27813
untranslated	GeneRIF Biological Term Annotations	1.0	null
potentially	GeneRIF Biological Term Annotations	1.0	null
distinguishing	GeneRIF Biological Term Annotations	1.0	null
inhibitory	GeneRIF Biological Term Annotations	1.0	null
Memory Disorders	CTD Gene-Disease Associations	1.0	1.40925
H3K4me2_osteoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
CEBPB_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Coma	CTD Gene-Disease Associations	1.0	1.01966
lesions	GeneRIF Biological Term Annotations	1.0	null
circulating	GeneRIF Biological Term Annotations	1.0	null
feedback	GeneRIF Biological Term Annotations	1.0	null
reading	GeneRIF Biological Term Annotations	1.0	null
thereby	GeneRIF Biological Term Annotations	1.0	null
normal	GeneRIF Biological Term Annotations	1.0	null
p53mediated	GeneRIF Biological Term Annotations	1.0	null
20068076-SuppTable11b	GeneSigDB Published Gene Signatures	1.0	null
specifies	GeneRIF Biological Term Annotations	1.0	null
proportion	GeneRIF Biological Term Annotations	1.0	null
JUND	ENCODE Transcription Factor Targets	1.0	null
mechanisms	GeneRIF Biological Term Annotations	1.0	null
transcript	GeneRIF Biological Term Annotations	1.0	null
deregulated	GeneRIF Biological Term Annotations	1.0	null
MYOG	ENCODE Transcription Factor Targets	1.0	null
comprising	GeneRIF Biological Term Annotations	1.0	null
would	GeneRIF Biological Term Annotations	1.0	null
been	GeneRIF Biological Term Annotations	1.0	null
chemotherapies	GeneRIF Biological Term Annotations	1.0	null
generate	GeneRIF Biological Term Annotations	1.0	null
HDAC1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
despite	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_H7_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
agent	GeneRIF Biological Term Annotations	1.0	null
mir34	GeneRIF Biological Term Annotations	1.0	null
combining	GeneRIF Biological Term Annotations	1.0	null
Necrosis	CTD Gene-Disease Associations	1.0	2.10819
rate	GeneRIF Biological Term Annotations	1.0	null
alcoholic	GeneRIF Biological Term Annotations	1.0	null
presumably	GeneRIF Biological Term Annotations	1.0	null
Anemia	CTD Gene-Disease Associations	1.0	1.42047
Cardiomyopathies	CTD Gene-Disease Associations	1.0	1.03789
H3K4me3_fibroblast of gingiva_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
fallopian tube	GTEx Tissue Gene Expression Profiles	-1.0	-1.17497
Hypertension	CTD Gene-Disease Associations	1.0	1.03715
decreased pulmonary ventilation	MGI Mouse Phenotype Associations 2023	1.0	null
addition	GeneRIF Biological Term Annotations	1.0	null
KMM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09238
POLR2A_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
higher	GeneRIF Biological Term Annotations	1.0	null
oncogene	GeneRIF Biological Term Annotations	1.0	null
concluded	GeneRIF Biological Term Annotations	1.0	null
affect	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_MEL cell line_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
par2	GeneRIF Biological Term Annotations	1.0	null
restore	GeneRIF Biological Term Annotations	1.0	null
Adenoma	CTD Gene-Disease Associations	1.0	1.07376
regulating	GeneRIF Biological Term Annotations	1.0	null
mir125b	GeneRIF Biological Term Annotations	1.0	null
nuclear	GeneRIF Biological Term Annotations	1.0	null
20028859-TableS2	GeneSigDB Published Gene Signatures	1.0	null
upregulated	GeneRIF Biological Term Annotations	1.0	null
tumorpropagating	GeneRIF Biological Term Annotations	1.0	null
hypoxiainduced	GeneRIF Biological Term Annotations	1.0	null
factors	GeneRIF Biological Term Annotations	1.0	null
resistance	GeneRIF Biological Term Annotations	1.0	null
using	GeneRIF Biological Term Annotations	1.0	null
inhibit	GeneRIF Biological Term Annotations	1.0	null
chondroblasts	GeneRIF Biological Term Annotations	1.0	null
confirms	GeneRIF Biological Term Annotations	1.0	null
significant	GeneRIF Biological Term Annotations	1.0	null
long	GeneRIF Biological Term Annotations	1.0	null
polymorphisms	GeneRIF Biological Term Annotations	1.0	null
Poisoning	CTD Gene-Disease Associations	1.0	1.12564
eGFP-JUND_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
inverse	GeneRIF Biological Term Annotations	1.0	null
form	GeneRIF Biological Term Annotations	1.0	null
exosomal	GeneRIF Biological Term Annotations	1.0	null
particularly	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_H1	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
model	GeneRIF Biological Term Annotations	1.0	null
Pulmonary Edema	CTD Gene-Disease Associations	1.0	1.05015
POLR2A_GM12878_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
micrornas	GeneRIF Biological Term Annotations	1.0	null
affects	GeneRIF Biological Term Annotations	1.0	null
effect	GeneRIF Biological Term Annotations	1.0	null
genemirnas	GeneRIF Biological Term Annotations	1.0	null
exosomes	GeneRIF Biological Term Annotations	1.0	null
antagonize	GeneRIF Biological Term Annotations	1.0	null
antagonizes	GeneRIF Biological Term Annotations	1.0	null
collective	GeneRIF Biological Term Annotations	1.0	null
mir34ahdac1hdac7hsp70	GeneRIF Biological Term Annotations	1.0	null
susceptibility	GeneRIF Biological Term Annotations	1.0	null
HH	CCLE Cell Line Gene CNV Profiles	1.0	1.43785
19924232-TableS3	GeneSigDB Published Gene Signatures	1.0	null
bioinformatics	GeneRIF Biological Term Annotations	1.0	null
posttranscriptionally	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_MEL cell line_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SK-MEL-28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.889783
overexpressing	GeneRIF Biological Term Annotations	1.0	null
e2f1	GeneRIF Biological Term Annotations	1.0	null
mir29	GeneRIF Biological Term Annotations	1.0	null
Neovascularization, Pathologic	CTD Gene-Disease Associations	1.0	1.13862
19895320-Table3	GeneSigDB Published Gene Signatures	1.0	null
lygdi	GeneRIF Biological Term Annotations	1.0	null
low	GeneRIF Biological Term Annotations	1.0	null
upregulation	GeneRIF Biological Term Annotations	1.0	null
OVISE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.43325
hnf4a	GeneRIF Biological Term Annotations	1.0	null
endogenous	GeneRIF Biological Term Annotations	1.0	null
Acute Kidney Injury	CTD Gene-Disease Associations	1.0	1.44273
benefit	GeneRIF Biological Term Annotations	1.0	null
MYC	ENCODE Transcription Factor Targets	1.0	null
such	GeneRIF Biological Term Annotations	1.0	null
energy	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_G1E_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
HCC2885	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.28955
mir200c	GeneRIF Biological Term Annotations	1.0	null
RUNX2	ChEA Transcription Factor Targets	1.0	null
elements	GeneRIF Biological Term Annotations	1.0	null
Precancerous Conditions	CTD Gene-Disease Associations	1.0	1.37275
inhibiting	GeneRIF Biological Term Annotations	1.0	null
predict	GeneRIF Biological Term Annotations	1.0	null
mesothelial	GeneRIF Biological Term Annotations	1.0	null
samples	GeneRIF Biological Term Annotations	1.0	null
additively	GeneRIF Biological Term Annotations	1.0	null
POLR2A_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Fibrosis	CTD Gene-Disease Associations	1.0	1.64235
CTCF_embryonic fibroblast_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
19895320-Table1	GeneSigDB Published Gene Signatures	1.0	null
Stomach Neoplasms	CTD Gene-Disease Associations	1.0	1.32221
mdm4	GeneRIF Biological Term Annotations	1.0	null
hormone	GeneRIF Biological Term Annotations	1.0	null
repression	GeneRIF Biological Term Annotations	1.0	null
prognosis	GeneRIF Biological Term Annotations	1.0	null
H4K20me1_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
dapk1	GeneRIF Biological Term Annotations	1.0	null
regulated	GeneRIF Biological Term Annotations	1.0	null
papilla	GeneRIF Biological Term Annotations	1.0	null
breast	GeneRIF Biological Term Annotations	1.0	null
H3K9me3_H1	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
diseases	GeneRIF Biological Term Annotations	1.0	null
SW 403	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.982888
leukemic	GeneRIF Biological Term Annotations	1.0	null
features	GeneRIF Biological Term Annotations	1.0	null
stimulated	GeneRIF Biological Term Annotations	1.0	null
mycn	GeneRIF Biological Term Annotations	1.0	null
tremors	MGI Mouse Phenotype Associations 2023	1.0	null
BXPC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.858598
AP-4	MotifMap Predicted Transcription Factor Targets	1.0	null
notch1	GeneRIF Biological Term Annotations	1.0	null
held	GeneRIF Biological Term Annotations	1.0	null
overall	GeneRIF Biological Term Annotations	1.0	null
utr	GeneRIF Biological Term Annotations	1.0	null
presence	GeneRIF Biological Term Annotations	1.0	null
H3K4me2_fibroblast of dermis_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
SK-MEL-24	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.46753
HCC2218	CCLE Cell Line Gene CNV Profiles	-1.0	-1.45781
treatment	GeneRIF Biological Term Annotations	1.0	null
regulatory	GeneRIF Biological Term Annotations	1.0	null
further	GeneRIF Biological Term Annotations	1.0	null
large	GeneRIF Biological Term Annotations	1.0	null
NIHOVCAR3	CCLE Cell Line Gene CNV Profiles	1.0	2.1512
H3K36me3_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
crohns	GeneRIF Biological Term Annotations	1.0	null
CTCF_fibroblast of dermis_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
occur	GeneRIF Biological Term Annotations	1.0	null
provides	GeneRIF Biological Term Annotations	1.0	null
cellcycle	GeneRIF Biological Term Annotations	1.0	null
suggests	GeneRIF Biological Term Annotations	1.0	null
H3K27me3_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
controlling	GeneRIF Biological Term Annotations	1.0	null
apoptotic	GeneRIF Biological Term Annotations	1.0	null
increasing	GeneRIF Biological Term Annotations	1.0	null
ZNF263_HEK293_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cisplatinbased	GeneRIF Biological Term Annotations	1.0	null
frequently	GeneRIF Biological Term Annotations	1.0	null
TP53-22573176-HFKS-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
Esophageal Neoplasms	CTD Gene-Disease Associations	1.0	1.10104
HDAC2	ENCODE Transcription Factor Targets	1.0	null
H3K36me3_NT2-D1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
pnuts	GeneRIF Biological Term Annotations	1.0	null
Neurotoxicity Syndromes	CTD Gene-Disease Associations	1.0	1.50498
H3K4me1_heart_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me1_embryonic fibroblast_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
RCOR1_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ewings	GeneRIF Biological Term Annotations	1.0	null
specific	GeneRIF Biological Term Annotations	1.0	null
abnormal neuron physiology	MPO Gene-Phenotype Associations	1.0	null
STAT4	MotifMap Predicted Transcription Factor Targets	1.0	null
positive	GeneRIF Biological Term Annotations	1.0	null
Pre-NOTCH Expression and Processing	Reactome Pathways 2014	1.0	null
who	GeneRIF Biological Term Annotations	1.0	null
COR-L88	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.00572
Obesity	CTD Gene-Disease Associations	1.0	2.88009
displayed	GeneRIF Biological Term Annotations	1.0	null
initiation	GeneRIF Biological Term Annotations	1.0	null
jag1	GeneRIF Biological Term Annotations	1.0	null
POLR2A_bone marrow macrophage_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Urinary Bladder Diseases	CTD Gene-Disease Associations	1.0	1.44409
inhibited	GeneRIF Biological Term Annotations	1.0	null
approaches	GeneRIF Biological Term Annotations	1.0	null
severity	GeneRIF Biological Term Annotations	1.0	null
restoration	GeneRIF Biological Term Annotations	1.0	null
phosphorylation	GeneRIF Biological Term Annotations	1.0	null
p53mir34	GeneRIF Biological Term Annotations	1.0	null
melanoma	GeneRIF Biological Term Annotations	1.0	null
stem	GeneRIF Biological Term Annotations	1.0	null
DMS 79	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.879289
esophageal	GeneRIF Biological Term Annotations	1.0	null
invasive	GeneRIF Biological Term Annotations	1.0	null
different	GeneRIF Biological Term Annotations	1.0	null
NCI-H1648	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05959
vein	GeneRIF Biological Term Annotations	1.0	null
magea	GeneRIF Biological Term Annotations	1.0	null
mesothelioma	GeneRIF Biological Term Annotations	1.0	null
undergoing	GeneRIF Biological Term Annotations	1.0	null
Neoplasm Invasiveness	CTD Gene-Disease Associations	1.0	1.381
G140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.858598
H3K36me3_Brain Anterior Caudate	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
SNU1214	CCLE Cell Line Gene CNV Profiles	-1.0	-1.60505
H3K9ac_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
KYSE-270	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.34208
liver	GTEx Tissue Gene Expression Profiles	-1.0	-1.17497
suppressed	GeneRIF Biological Term Annotations	1.0	null
MHH-NB-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.89343
POLR2AphosphoS5_U-87 MG_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
survival	GeneRIF Biological Term Annotations	1.0	null
etiology	GeneRIF Biological Term Annotations	1.0	null
Carcinoma, Hepatocellular	CTD Gene-Disease Associations	1.0	1.61851
previously	GeneRIF Biological Term Annotations	1.0	null
MOTN1	CCLE Cell Line Gene CNV Profiles	1.0	1.44484
shows	GeneRIF Biological Term Annotations	1.0	null
multiforme	GeneRIF Biological Term Annotations	1.0	null
mutual	GeneRIF Biological Term Annotations	1.0	null
DMS454	CCLE Cell Line Gene CNV Profiles	1.0	2.2855
main	GeneRIF Biological Term Annotations	1.0	null
correlated	GeneRIF Biological Term Annotations	1.0	null
infarction	GeneRIF Biological Term Annotations	1.0	null
characterized	GeneRIF Biological Term Annotations	1.0	null
CTCF_thymus_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cycle	GeneRIF Biological Term Annotations	1.0	null
provide	GeneRIF Biological Term Annotations	1.0	null
luciferase	GeneRIF Biological Term Annotations	1.0	null
overexpression	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
ZNF384_ES-E14_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
myc	GeneRIF Biological Term Annotations	1.0	null
act	GeneRIF Biological Term Annotations	1.0	null
inhibition	GeneRIF Biological Term Annotations	1.0	null
MOLM-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.879289
KMS-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02016
H3K36me3_GM06990_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
adrenocortical	GeneRIF Biological Term Annotations	1.0	null
egfr	GeneRIF Biological Term Annotations	1.0	null
considered	GeneRIF Biological Term Annotations	1.0	null
KMS-28BM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48668
sensitivity	GeneRIF Biological Term Annotations	1.0	null
TCF12	ENCODE Transcription Factor Targets	1.0	null
POLR2A	ENCODE Transcription Factor Targets	1.0	null
POLR2A_embryonic fibroblast_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
aldh2	GeneRIF Biological Term Annotations	1.0	null
fak	GeneRIF Biological Term Annotations	1.0	null
analysed	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_U2OS_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Carcinoma, Non-Small-Cell Lung	HuGE Navigator Gene-Phenotype Associations	1.0	null
enter	GeneRIF Biological Term Annotations	1.0	null
underwent	GeneRIF Biological Term Annotations	1.0	null
hepatic	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_testis_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
inactivated	GeneRIF Biological Term Annotations	1.0	null
lead	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_fibroblast of dermis_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K36me3_H7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
pcbp2depletion	GeneRIF Biological Term Annotations	1.0	null
indicates	GeneRIF Biological Term Annotations	1.0	null
leukemia	GeneRIF Biological Term Annotations	1.0	null
HCC1569	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09238
NCIH1836	CCLE Cell Line Gene CNV Profiles	1.0	1.7868
Heart Diseases	CTD Gene-Disease Associations	1.0	2.88009
H3K4me1_MEL cell line_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
abnormal	GeneRIF Biological Term Annotations	1.0	null
mir34asirt1p53	GeneRIF Biological Term Annotations	1.0	null
able	GeneRIF Biological Term Annotations	1.0	null
cd15cd133	GeneRIF Biological Term Annotations	1.0	null
COV318	CCLE Cell Line Gene CNV Profiles	1.0	1.39485
Proteinuria	CTD Gene-Disease Associations	1.0	1.29103
Colonic Neoplasms	CTD Gene-Disease Associations	1.0	1.30941
Melanoma	HuGE Navigator Gene-Phenotype Associations	1.0	null
owing	GeneRIF Biological Term Annotations	1.0	null
tumourspecific	GeneRIF Biological Term Annotations	1.0	null
correspondingly	GeneRIF Biological Term Annotations	1.0	null
limb	GeneRIF Biological Term Annotations	1.0	null
HN	CCLE Cell Line Gene CNV Profiles	1.0	1.60437
mir34bc	GeneRIF Biological Term Annotations	1.0	null
mir34a and TGIF2 in osteoclastogenesis(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
direct	GeneRIF Biological Term Annotations	1.0	null
signals	GeneRIF Biological Term Annotations	1.0	null
present	GeneRIF Biological Term Annotations	1.0	null
normal phenotype	MPO Gene-Phenotype Associations	1.0	null
represent	GeneRIF Biological Term Annotations	1.0	null
division	GeneRIF Biological Term Annotations	1.0	null
Hypertriglyceridemia	CTD Gene-Disease Associations	1.0	1.15156
dendritic	GeneRIF Biological Term Annotations	1.0	null
sirt1p53	GeneRIF Biological Term Annotations	1.0	null
proteomics	GeneRIF Biological Term Annotations	1.0	null
let7b	GeneRIF Biological Term Annotations	1.0	null
small intestine	GTEx Tissue Gene Expression Profiles	-1.0	-1.17497
support	GeneRIF Biological Term Annotations	1.0	null
leads	GeneRIF Biological Term Annotations	1.0	null
infection	GeneRIF Biological Term Annotations	1.0	null
Fever	CTD Gene-Disease Associations	1.0	1.24528
TBP	ENCODE Transcription Factor Targets	1.0	null
Nausea	CTD Gene-Disease Associations	1.0	1.01928
Signal Transduction	Reactome Pathways 2014	1.0	null
nonsmall	GeneRIF Biological Term Annotations	1.0	null
box	GeneRIF Biological Term Annotations	1.0	null
transfection	GeneRIF Biological Term Annotations	1.0	null
due	GeneRIF Biological Term Annotations	1.0	null
NCI-H820	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.31472
KPNSI9S	CCLE Cell Line Gene CNV Profiles	-1.0	-2.43224
STAT1-20625510-HELA-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
foxp1	GeneRIF Biological Term Annotations	1.0	null
p21	GeneRIF Biological Term Annotations	1.0	null
multiple	GeneRIF Biological Term Annotations	1.0	null
nonmalignant	GeneRIF Biological Term Annotations	1.0	null
abnormal immune system cell morphology	MGI Mouse Phenotype Associations 2023	1.0	null
clear	GeneRIF Biological Term Annotations	1.0	null
revealed	GeneRIF Biological Term Annotations	1.0	null
agingrelated	GeneRIF Biological Term Annotations	1.0	null
ifnbeta	GeneRIF Biological Term Annotations	1.0	null
Liver Diseases	CTD Gene-Disease Associations	1.0	1.51784
H3K9ac_fibroblast of lung_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
pcbp2	GeneRIF Biological Term Annotations	1.0	null
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09238
liver	GeneRIF Biological Term Annotations	1.0	null
inhibits	GeneRIF Biological Term Annotations	1.0	null
H3K27ac_fibroblast of dermis_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
chemoresistant	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_bronchial epithelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me3_osteoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
KDM5B	ENCODE Transcription Factor Targets	1.0	null
microrna34a	GeneRIF Biological Term Annotations	1.0	null
induction	GeneRIF Biological Term Annotations	1.0	null
family	GeneRIF Biological Term Annotations	1.0	null
TCF3_myocyte_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MAFA	MotifMap Predicted Transcription Factor Targets	1.0	null
serve	GeneRIF Biological Term Annotations	1.0	null
aggressive	GeneRIF Biological Term Annotations	1.0	null
Cognition Disorders	CTD Gene-Disease Associations	1.0	1.04389
promoted	GeneRIF Biological Term Annotations	1.0	null
LCLC-97TM1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.828487
colorectal	GeneRIF Biological Term Annotations	1.0	null
radiosensitivity	GeneRIF Biological Term Annotations	1.0	null
pathways	GeneRIF Biological Term Annotations	1.0	null
irradiation	GeneRIF Biological Term Annotations	1.0	null
mobility	GeneRIF Biological Term Annotations	1.0	null
suppress	GeneRIF Biological Term Annotations	1.0	null
molecular	GeneRIF Biological Term Annotations	1.0	null
biomarker	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_G1E-ER4_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
loss	GeneRIF Biological Term Annotations	1.0	null
Liver Neoplasms	HuGE Navigator Gene-Phenotype Associations	1.0	null
H3K4me1_megakaryocyte_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
regulator	GeneRIF Biological Term Annotations	1.0	null
posttranscriptional	GeneRIF Biological Term Annotations	1.0	null
U343	CCLE Cell Line Gene CNV Profiles	-1.0	-2.39477
dental	GeneRIF Biological Term Annotations	1.0	null
SNU-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.58266
met	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_MEL cell line_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
makers	GeneRIF Biological Term Annotations	1.0	null
NAMALWA	CCLE Cell Line Gene CNV Profiles	1.0	1.38236
mir192	GeneRIF Biological Term Annotations	1.0	null
purine	GeneRIF Biological Term Annotations	1.0	null
degrading	GeneRIF Biological Term Annotations	1.0	null
mir21	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCIH1648	CCLE Cell Line Gene CNV Profiles	-1.0	-2.04382
pebp4	GeneRIF Biological Term Annotations	1.0	null
sirt6	GeneRIF Biological Term Annotations	1.0	null
CPCN	CCLE Cell Line Gene CNV Profiles	-1.0	-1.62578
oncogenes	GeneRIF Biological Term Annotations	1.0	null
diagnosis	GeneRIF Biological Term Annotations	1.0	null
protooncogene	GeneRIF Biological Term Annotations	1.0	null
poor	GeneRIF Biological Term Annotations	1.0	null
larynx	GeneRIF Biological Term Annotations	1.0	null
tumorigenic	GeneRIF Biological Term Annotations	1.0	null
VMRC-LCD	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14648
hpv	GeneRIF Biological Term Annotations	1.0	null
key	GeneRIF Biological Term Annotations	1.0	null
stress	GeneRIF Biological Term Annotations	1.0	null
pdgfr	GeneRIF Biological Term Annotations	1.0	null
RFX1	MotifMap Predicted Transcription Factor Targets	1.0	null
subsequently	GeneRIF Biological Term Annotations	1.0	null
xpression	GeneRIF Biological Term Annotations	1.0	null
preferentially	GeneRIF Biological Term Annotations	1.0	null
decrease	GeneRIF Biological Term Annotations	1.0	null
gastric	GeneRIF Biological Term Annotations	1.0	null
klf4	GeneRIF Biological Term Annotations	1.0	null
endothelial	GeneRIF Biological Term Annotations	1.0	null
cmyc	GeneRIF Biological Term Annotations	1.0	null
contribute	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_H9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
etiological	GeneRIF Biological Term Annotations	1.0	null
Lung Diseases	CTD Gene-Disease Associations	1.0	1.34198
myocardial	GeneRIF Biological Term Annotations	1.0	null
POLR2A_H1-hESC_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
LOX-IMVI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13649
MYOD1_myocyte_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
implicated	GeneRIF Biological Term Annotations	1.0	null
therapy	GeneRIF Biological Term Annotations	1.0	null
restrains	GeneRIF Biological Term Annotations	1.0	null
damage	GeneRIF Biological Term Annotations	1.0	null
p53independent	GeneRIF Biological Term Annotations	1.0	null
rhamnetin	GeneRIF Biological Term Annotations	1.0	null
MYC_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
correlates	GeneRIF Biological Term Annotations	1.0	null
cisplatin	GeneRIF Biological Term Annotations	1.0	null
ing2	GeneRIF Biological Term Annotations	1.0	null
mir155	GeneRIF Biological Term Annotations	1.0	null
pi3kaktbad	GeneRIF Biological Term Annotations	1.0	null
healthy	GeneRIF Biological Term Annotations	1.0	null
Leukopenia	CTD Gene-Disease Associations	1.0	1.04126
escc	GeneRIF Biological Term Annotations	1.0	null
describe	GeneRIF Biological Term Annotations	1.0	null
postliver	GeneRIF Biological Term Annotations	1.0	null
cpg	GeneRIF Biological Term Annotations	1.0	null
cardiomyocytes	GeneRIF Biological Term Annotations	1.0	null
sarcoma	GeneRIF Biological Term Annotations	1.0	null
KLE	CCLE Cell Line Gene CNV Profiles	1.0	1.41454
counteracts	GeneRIF Biological Term Annotations	1.0	null
mir34adependent	GeneRIF Biological Term Annotations	1.0	null
MAX	ENCODE Transcription Factor Targets	1.0	null
strategies	GeneRIF Biological Term Annotations	1.0	null
SUZ12_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
dll1	GeneRIF Biological Term Annotations	1.0	null
myeloid	GeneRIF Biological Term Annotations	1.0	null
EZH2_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
attractive	GeneRIF Biological Term Annotations	1.0	null
epigenetic	GeneRIF Biological Term Annotations	1.0	null
transformation	GeneRIF Biological Term Annotations	1.0	null
HCC630	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03035
dehydrogenase	GeneRIF Biological Term Annotations	1.0	null
TK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2334
FU97	CCLE Cell Line Gene CNV Profiles	1.0	1.7503
ptc	GeneRIF Biological Term Annotations	1.0	null
critical	GeneRIF Biological Term Annotations	1.0	null
lymphoma	GeneRIF Biological Term Annotations	1.0	null
mutated	GeneRIF Biological Term Annotations	1.0	null
Weight Gain	CTD Gene-Disease Associations	1.0	1.11843
miR-targeted genes in leukocytes - TarBase(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
biosynthesis	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
markers	GeneRIF Biological Term Annotations	1.0	null
MAX_K562_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
promoter	GeneRIF Biological Term Annotations	1.0	null
H3K27ac_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
downregulating	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_H1 BMP4 Derived Trophoblast Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
tumortargeting	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_Adipose Derived Mesenchymal Stem Cell Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
tissues	GeneRIF Biological Term Annotations	1.0	null
SNU738	CCLE Cell Line Gene CNV Profiles	-1.0	-2.21185
efficiency	GeneRIF Biological Term Annotations	1.0	null
H3K27ac_CH12.LX_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
oncogenic	GeneRIF Biological Term Annotations	1.0	null
lymphocytic	GeneRIF Biological Term Annotations	1.0	null
profile	GeneRIF Biological Term Annotations	1.0	null
network	GeneRIF Biological Term Annotations	1.0	null
p53microrna34	GeneRIF Biological Term Annotations	1.0	null
influencing	GeneRIF Biological Term Annotations	1.0	null
aberrant	GeneRIF Biological Term Annotations	1.0	null
interfering	GeneRIF Biological Term Annotations	1.0	null
Genetic Predisposition to Disease	HuGE Navigator Gene-Phenotype Associations	1.0	null
keratinocytes	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_MEL cell line_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
other	GeneRIF Biological Term Annotations	1.0	null
NCI-H1666	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13649
H3K4me1_Brain Cingulate Gyrus	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
H3K36me3_MCF-7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cdk4	GeneRIF Biological Term Annotations	1.0	null
decreased prepulse inhibition	MGI Mouse Phenotype Associations 2023	1.0	null
Lung Neoplasms	CTD Gene-Disease Associations	1.0	1.51305
deletion	GeneRIF Biological Term Annotations	1.0	null
SW 948	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.933046
HDAC6_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
proper	GeneRIF Biological Term Annotations	1.0	null
AP-2rep	MotifMap Predicted Transcription Factor Targets	1.0	null
deltalike	GeneRIF Biological Term Annotations	1.0	null
KYSE270	CCLE Cell Line Gene CNV Profiles	1.0	1.80233
POLR2AphosphoS2_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
increased incidence of tumors by chemical induction	MGI Mouse Phenotype Associations 2023	1.0	null
property	GeneRIF Biological Term Annotations	1.0	null
H3K27ac_embryonic fibroblast_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
BICR 31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.24358
MEIS1-20887958-HPC-7-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
mmp7	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K27me3_G1E_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
eomes_23431145_e14dot5_neocortex_lof_mouse_gpl6246_gse43387	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.460948
shear	GeneRIF Biological Term Annotations	1.0	null
galnt7	GeneRIF Biological Term Annotations	1.0	null
heat	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_lung_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
MITF-21258399-MELANOMA-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
SNU489	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21048
where	GeneRIF Biological Term Annotations	1.0	null
axin2	GeneRIF Biological Term Annotations	1.0	null
synergistically	GeneRIF Biological Term Annotations	1.0	null
hepg2	GeneRIF Biological Term Annotations	1.0	null
essential	GeneRIF Biological Term Annotations	1.0	null
NCIH209	CCLE Cell Line Gene CNV Profiles	-1.0	-1.83259
contributes	GeneRIF Biological Term Annotations	1.0	null
innate	GeneRIF Biological Term Annotations	1.0	null
EJM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.43325
TEF-1	MotifMap Predicted Transcription Factor Targets	1.0	null
without	GeneRIF Biological Term Annotations	1.0	null
k246	GeneRIF Biological Term Annotations	1.0	null
tolllike	GeneRIF Biological Term Annotations	1.0	null
metabolic	GeneRIF Biological Term Annotations	1.0	null
tgfb1	GeneRIF Biological Term Annotations	1.0	null
suggested	GeneRIF Biological Term Annotations	1.0	null
identification	GeneRIF Biological Term Annotations	1.0	null
doublenegative	GeneRIF Biological Term Annotations	1.0	null
replacement	GeneRIF Biological Term Annotations	1.0	null
nfkappabdependent	GeneRIF Biological Term Annotations	1.0	null
POLR2AphosphoS5_G1E_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
transduction	GeneRIF Biological Term Annotations	1.0	null
mir145	GeneRIF Biological Term Annotations	1.0	null
tumorsuppressor	GeneRIF Biological Term Annotations	1.0	null
part	GeneRIF Biological Term Annotations	1.0	null
20068076-Table4	GeneSigDB Published Gene Signatures	1.0	null
especially	GeneRIF Biological Term Annotations	1.0	null
mirna34	GeneRIF Biological Term Annotations	1.0	null
bcell	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
head	GeneRIF Biological Term Annotations	1.0	null
utility	GeneRIF Biological Term Annotations	1.0	null
downregulation	GeneRIF Biological Term Annotations	1.0	null
bimodal	GeneRIF Biological Term Annotations	1.0	null
having	GeneRIF Biological Term Annotations	1.0	null
highlight	GeneRIF Biological Term Annotations	1.0	null
cutaneous	GeneRIF Biological Term Annotations	1.0	null
resulting	GeneRIF Biological Term Annotations	1.0	null
H2AFZ_osteoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
stimulation	GeneRIF Biological Term Annotations	1.0	null
H3K4me2_fibroblast of lung_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
RBBP5_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me3_erythroblast_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
bapinduced	GeneRIF Biological Term Annotations	1.0	null
Neoplasms, Experimental	CTD Gene-Disease Associations	1.0	1.46648
H3K4me1_ES-Bruce4_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
lmp1	GeneRIF Biological Term Annotations	1.0	null
predispose	GeneRIF Biological Term Annotations	1.0	null
involvement	GeneRIF Biological Term Annotations	1.0	null
progenitor	GeneRIF Biological Term Annotations	1.0	null
canonical	GeneRIF Biological Term Annotations	1.0	null
bronchial	GeneRIF Biological Term Annotations	1.0	null
thrombus	GeneRIF Biological Term Annotations	1.0	null
RMG-I	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.38972
predictive	GeneRIF Biological Term Annotations	1.0	null
some	GeneRIF Biological Term Annotations	1.0	null
SBC5	CCLE Cell Line Gene CNV Profiles	1.0	1.77184
Hyperplasia	CTD Gene-Disease Associations	1.0	1.79885
primary	GeneRIF Biological Term Annotations	1.0	null
nafld	GeneRIF Biological Term Annotations	1.0	null
orthotopic	GeneRIF Biological Term Annotations	1.0	null
dna	GeneRIF Biological Term Annotations	1.0	null
chick	GeneRIF Biological Term Annotations	1.0	null
reserved	GeneRIF Biological Term Annotations	1.0	null
geneexpression	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_osteoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
degradation	GeneRIF Biological Term Annotations	1.0	null
H3K9ac_Chondrocytes from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
deterioration	GeneRIF Biological Term Annotations	1.0	null
BT-549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.950994
MEWO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.05689
Neoplasms	CTD Gene-Disease Associations	1.0	1.63384
represents	GeneRIF Biological Term Annotations	1.0	null
HDAC6_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
prerequisite	GeneRIF Biological Term Annotations	1.0	null
Cell Transformation, Neoplastic	CTD Gene-Disease Associations	1.0	1.37987
marker	GeneRIF Biological Term Annotations	1.0	null
supports	GeneRIF Biological Term Annotations	1.0	null
death	GeneRIF Biological Term Annotations	1.0	null
node	GeneRIF Biological Term Annotations	1.0	null
wnt	GeneRIF Biological Term Annotations	1.0	null
bcl2	GeneRIF Biological Term Annotations	1.0	null
SOX2_Deficiency_GDS4853_321_human_AZ-521 gastric cancer (GC) cell line - 18 Hours	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
subjects	GeneRIF Biological Term Annotations	1.0	null
methylation	GeneRIF Biological Term Annotations	1.0	null
SAP30	ENCODE Transcription Factor Targets	1.0	null
rat	GeneRIF Biological Term Annotations	1.0	null
Skin Neoplasms	HuGE Navigator Gene-Phenotype Associations	1.0	null
macrophages	GeneRIF Biological Term Annotations	1.0	null
wide	GeneRIF Biological Term Annotations	1.0	null
crc	GeneRIF Biological Term Annotations	1.0	null
mononuclear	GeneRIF Biological Term Annotations	1.0	null
neoplasia	GeneRIF Biological Term Annotations	1.0	null
p63	GeneRIF Biological Term Annotations	1.0	null
CEBPB	ENCODE Transcription Factor Targets	1.0	null
KMS28BM	CCLE Cell Line Gene CNV Profiles	1.0	1.60722
accumulation	GeneRIF Biological Term Annotations	1.0	null
dual	GeneRIF Biological Term Annotations	1.0	null
promote	GeneRIF Biological Term Annotations	1.0	null
miR-targeted genes in squamous cell - TarBase(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
accreta	GeneRIF Biological Term Annotations	1.0	null
nr1i2	GeneRIF Biological Term Annotations	1.0	null
DMS153	CCLE Cell Line Gene CNV Profiles	1.0	1.60154
bone	GeneRIF Biological Term Annotations	1.0	null
prima1	GeneRIF Biological Term Annotations	1.0	null
H3K9ac_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H4K20me1_A549_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
sca1	GeneRIF Biological Term Annotations	1.0	null
ONCODG1	CCLE Cell Line Gene CNV Profiles	1.0	1.48049
minimal	GeneRIF Biological Term Annotations	1.0	null
sorafenibinduced	GeneRIF Biological Term Annotations	1.0	null
down	GeneRIF Biological Term Annotations	1.0	null
p53deficient	GeneRIF Biological Term Annotations	1.0	null
Myocardial Infarction	CTD Gene-Disease Associations	1.0	1.06008
late	GeneRIF Biological Term Annotations	1.0	null
hnf4alpha	GeneRIF Biological Term Annotations	1.0	null
C32TG	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0191
CEBPB_IMR-90_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cooperate	GeneRIF Biological Term Annotations	1.0	null
H3K4me2_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
specifically	GeneRIF Biological Term Annotations	1.0	null
SK-N-AS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.67284
NAMALWA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.78911
kinase	GeneRIF Biological Term Annotations	1.0	null
region	GeneRIF Biological Term Annotations	1.0	null
restoring	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_megakaryocyte_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me1_olfactory bulb_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
H2AFZ_skeletal muscle myoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
investigated	GeneRIF Biological Term Annotations	1.0	null
NCI-H292	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.79716
epithelial	GeneRIF Biological Term Annotations	1.0	null
neuronal	GeneRIF Biological Term Annotations	1.0	null
unique	GeneRIF Biological Term Annotations	1.0	null
proliferative	GeneRIF Biological Term Annotations	1.0	null
highrisk	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_BJ_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
derived	GeneRIF Biological Term Annotations	1.0	null
subtypes	GeneRIF Biological Term Annotations	1.0	null
Seizures	CTD Gene-Disease Associations	1.0	1.07625
EZH2	ENCODE Transcription Factor Targets	1.0	null
evidence	GeneRIF Biological Term Annotations	1.0	null
HCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.950994
indicated	GeneRIF Biological Term Annotations	1.0	null
insight	GeneRIF Biological Term Annotations	1.0	null
biomarkers	GeneRIF Biological Term Annotations	1.0	null
cyclerelated	GeneRIF Biological Term Annotations	1.0	null
abnormal cell physiology	MGI Mouse Phenotype Associations 2023	1.0	null
Glucose Intolerance	CTD Gene-Disease Associations	1.0	2.88009
families	GeneRIF Biological Term Annotations	1.0	null
cardiac	GeneRIF Biological Term Annotations	1.0	null
tumorsuppressive	GeneRIF Biological Term Annotations	1.0	null
PSN1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.828487
forced	GeneRIF Biological Term Annotations	1.0	null
reporter	GeneRIF Biological Term Annotations	1.0	null
sharp	GeneRIF Biological Term Annotations	1.0	null
metachronous	GeneRIF Biological Term Annotations	1.0	null
H3K27ac_fibroblast of lung_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
NCI-H510A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.08268
andor	GeneRIF Biological Term Annotations	1.0	null
vivo	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_kidney_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
particular	GeneRIF Biological Term Annotations	1.0	null
megakaryocytic	GeneRIF Biological Term Annotations	1.0	null
aldehyde	GeneRIF Biological Term Annotations	1.0	null
U-698-M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.53234
after	GeneRIF Biological Term Annotations	1.0	null
signature	GeneRIF Biological Term Annotations	1.0	null
preventing	GeneRIF Biological Term Annotations	1.0	null
directs	GeneRIF Biological Term Annotations	1.0	null
survivin	GeneRIF Biological Term Annotations	1.0	null
let7	GeneRIF Biological Term Annotations	1.0	null
HN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.34208
philadelphianegative	GeneRIF Biological Term Annotations	1.0	null
ccnd1	GeneRIF Biological Term Annotations	1.0	null
advanced	GeneRIF Biological Term Annotations	1.0	null
relative	GeneRIF Biological Term Annotations	1.0	null
demonstrated	GeneRIF Biological Term Annotations	1.0	null
decreased	GeneRIF Biological Term Annotations	1.0	null
RB1_KD_GSE50532_627_human_OSTEOBLASTS	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
level	GeneRIF Biological Term Annotations	1.0	null
mir34adependant	GeneRIF Biological Term Annotations	1.0	null
snail	GeneRIF Biological Term Annotations	1.0	null
fibrosis	GeneRIF Biological Term Annotations	1.0	null
NCIH510	CCLE Cell Line Gene CNV Profiles	1.0	2.74498
RCOR1	ENCODE Transcription Factor Targets	1.0	null
hmgb1	GeneRIF Biological Term Annotations	1.0	null
serum	GeneRIF Biological Term Annotations	1.0	null
populations	GeneRIF Biological Term Annotations	1.0	null
ischemic	GeneRIF Biological Term Annotations	1.0	null
mirna124a	GeneRIF Biological Term Annotations	1.0	null
LBP-1	MotifMap Predicted Transcription Factor Targets	1.0	null
status	GeneRIF Biological Term Annotations	1.0	null
p53mutant	GeneRIF Biological Term Annotations	1.0	null
hypoalgesia	MGI Mouse Phenotype Associations 2023	1.0	null
gallbladder	GeneRIF Biological Term Annotations	1.0	null
antiapoptotic	GeneRIF Biological Term Annotations	1.0	null
reversed	GeneRIF Biological Term Annotations	1.0	null
toxicity	GeneRIF Biological Term Annotations	1.0	null
increased vertical activity	MGI Mouse Phenotype Associations 2023	1.0	null
Fatty Liver	CTD Gene-Disease Associations	1.0	2.88009
showed	GeneRIF Biological Term Annotations	1.0	null
including	GeneRIF Biological Term Annotations	1.0	null
common	GeneRIF Biological Term Annotations	1.0	null
mir4835p	GeneRIF Biological Term Annotations	1.0	null
earliest	GeneRIF Biological Term Annotations	1.0	null
foxj2	GeneRIF Biological Term Annotations	1.0	null
relationship	GeneRIF Biological Term Annotations	1.0	null
molecules	GeneRIF Biological Term Annotations	1.0	null
TP63-23658742-EP156T-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
related	GeneRIF Biological Term Annotations	1.0	null
IMR32	CCLE Cell Line Gene CNV Profiles	-1.0	-1.60044
signal	GeneRIF Biological Term Annotations	1.0	null
Mucositis	CTD Gene-Disease Associations	1.0	1.2415
chemotherapy	GeneRIF Biological Term Annotations	1.0	null
downregulated	GeneRIF Biological Term Annotations	1.0	null
review	GeneRIF Biological Term Annotations	1.0	null
axis	GeneRIF Biological Term Annotations	1.0	null
CAL148	CCLE Cell Line Gene CNV Profiles	-1.0	-1.46635
vegf	GeneRIF Biological Term Annotations	1.0	null
udca	GeneRIF Biological Term Annotations	1.0	null
mir22	GeneRIF Biological Term Annotations	1.0	null
class	GeneRIF Biological Term Annotations	1.0	null
phase	GeneRIF Biological Term Annotations	1.0	null
enriched	GeneRIF Biological Term Annotations	1.0	null
reviewmetaanalysis	GeneRIF Biological Term Annotations	1.0	null
chondrogenesis	GeneRIF Biological Term Annotations	1.0	null
mammalian phenotype	MPO Gene-Phenotype Associations	1.0	null
fra1	GeneRIF Biological Term Annotations	1.0	null
very	GeneRIF Biological Term Annotations	1.0	null
influences	GeneRIF Biological Term Annotations	1.0	null
cellular phenotype	MPO Gene-Phenotype Associations	1.0	null
H3K4me1_A549_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
NCI-H1355	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.29798
Fetal Growth Retardation	CTD Gene-Disease Associations	1.0	1.02485
repair	GeneRIF Biological Term Annotations	1.0	null
inactivation	GeneRIF Biological Term Annotations	1.0	null
cellular	GeneRIF Biological Term Annotations	1.0	null
downstream	GeneRIF Biological Term Annotations	1.0	null
onset	GeneRIF Biological Term Annotations	1.0	null
demethylating	GeneRIF Biological Term Annotations	1.0	null
BCPAP	CCLE Cell Line Gene CNV Profiles	1.0	1.37989
Neuro D	MotifMap Predicted Transcription Factor Targets	1.0	null
Neural Tube Defects	CTD Gene-Disease Associations	1.0	1.28703
SUM 229PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.93283
induced	GeneRIF Biological Term Annotations	1.0	null
nktcell	GeneRIF Biological Term Annotations	1.0	null
H4K20me1_HeLa-S3_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
trail	GeneRIF Biological Term Annotations	1.0	null
lipopolysaccharide	GeneRIF Biological Term Annotations	1.0	null
CAL-148	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.7514
mitochondrial	GeneRIF Biological Term Annotations	1.0	null
selective	GeneRIF Biological Term Annotations	1.0	null
epithelialmesenchymal	GeneRIF Biological Term Annotations	1.0	null
candidates	GeneRIF Biological Term Annotations	1.0	null
selfrenewal	GeneRIF Biological Term Annotations	1.0	null
concomitant	GeneRIF Biological Term Annotations	1.0	null
decreased startle reflex	MGI Mouse Phenotype Associations 2023	1.0	null
various	GeneRIF Biological Term Annotations	1.0	null
occurred	GeneRIF Biological Term Annotations	1.0	null
gas1	GeneRIF Biological Term Annotations	1.0	null
does	GeneRIF Biological Term Annotations	1.0	null
ctcf	GeneRIF Biological Term Annotations	1.0	null
differentiation	GeneRIF Biological Term Annotations	1.0	null
their	GeneRIF Biological Term Annotations	1.0	null
MFE280	CCLE Cell Line Gene CNV Profiles	-1.0	-1.86307
H3K4me1_limb_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
no abnormal phenotype detected	MGI Mouse Phenotype Associations 2023	1.0	null
dysregulation	GeneRIF Biological Term Annotations	1.0	null
metastases	GeneRIF Biological Term Annotations	1.0	null
oxidative	GeneRIF Biological Term Annotations	1.0	null
STAT1	ChEA Transcription Factor Targets	1.0	null
KPNRTBM1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.3699
acting	GeneRIF Biological Term Annotations	1.0	null
radiosensitizers	GeneRIF Biological Term Annotations	1.0	null
chronic	GeneRIF Biological Term Annotations	1.0	null
g0g1	GeneRIF Biological Term Annotations	1.0	null
HCC515	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.881726
Bradycardia	CTD Gene-Disease Associations	1.0	1.15055
Neutropenia	CTD Gene-Disease Associations	1.0	1.14064
plasma	GeneRIF Biological Term Annotations	1.0	null
prognostic	GeneRIF Biological Term Annotations	1.0	null
bladder	GeneRIF Biological Term Annotations	1.0	null
proliferation	GeneRIF Biological Term Annotations	1.0	null
targeting	GeneRIF Biological Term Annotations	1.0	null
tumorigenesis	GeneRIF Biological Term Annotations	1.0	null
lower	GeneRIF Biological Term Annotations	1.0	null
D-502MG	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.11641
CTCF	ENCODE Transcription Factor Targets	1.0	null
shock	GeneRIF Biological Term Annotations	1.0	null
ligand	GeneRIF Biological Term Annotations	1.0	null
G-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15895
range	GeneRIF Biological Term Annotations	1.0	null
bax	GeneRIF Biological Term Annotations	1.0	null
suggesting	GeneRIF Biological Term Annotations	1.0	null
EP300_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
candidate	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_Brain Hippocampus Middle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
glioma	GeneRIF Biological Term Annotations	1.0	null
Skin Neoplasms	CTD Gene-Disease Associations	1.0	1.29379
H3K36me3_GM06990_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
toward	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_megakaryocyte_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
ZNF384	ENCODE Transcription Factor Targets	1.0	null
muscle	GeneRIF Biological Term Annotations	1.0	null
set	GeneRIF Biological Term Annotations	1.0	null
TE8	CCLE Cell Line Gene CNV Profiles	1.0	1.3311
CHP126	CCLE Cell Line Gene CNV Profiles	-1.0	-1.51029
Neurobehavioral Manifestations	CTD Gene-Disease Associations	1.0	1.14713
Leukemia, Lymphoid	CTD Gene-Disease Associations	1.0	1.03345
usefulness	GeneRIF Biological Term Annotations	1.0	null
Heart Defects, Congenital	CTD Gene-Disease Associations	1.0	1.1556
induces	GeneRIF Biological Term Annotations	1.0	null
bmyb	GeneRIF Biological Term Annotations	1.0	null
promoters	GeneRIF Biological Term Annotations	1.0	null
regardless	GeneRIF Biological Term Annotations	1.0	null
ki67	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_Brain Mid Frontal Lobe	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
yy1	GeneRIF Biological Term Annotations	1.0	null