association	dataset	threshold value	standardized value
G22	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.84268
H3K4me1_CD4 Memory Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
NCI-H23	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.12152
HEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48972
NUDHL1	CCLE Cell Line Gene CNV Profiles	1.0	1.49483
MKN-74	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.78546
H3K9me3_GM12878_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
HEL9217	CCLE Cell Line Gene CNV Profiles	1.0	2.15511
ME-180	COSMIC Cell Line Gene CNV Profiles	1.0	2.13708
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15035
DAN-G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.17205
BFTC-905	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04295
ACHN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.78546
LC4-1	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
SET-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.78546
G130	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.33517
DK-MG	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
NCI-H446	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.883292
NCI-H2198	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.835611
D-336MG	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
TOV-112D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.82394
JIYOYE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.36574
NALM-6	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
MCF10DCIS.COM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02763
KYSE-450	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.87608
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.969328
EC-GI-10	COSMIC Cell Line Gene CNV Profiles	1.0	2.13708
NALM19	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32851
NCI-H1648	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.847719
COLO 320DM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.919151
OCI-LY-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12545
STAT3_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TYK-NU.CP-R	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.914743
RERF-GC-1B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02197
LCLC103H	CCLE Cell Line Gene CNV Profiles	1.0	1.7622
MIA-PACA-2	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
NCI-H2810	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.883292
SNU-620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.50107
HT-115	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12545
SNU449	CCLE Cell Line Gene CNV Profiles	-1.0	-1.42817
HMY-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.12119
AM38	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35386
PA-TU-8988S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.28574
NCI-H441	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07948
NALM6	CCLE Cell Line Gene CNV Profiles	-1.0	-1.50657
ECGI10	CCLE Cell Line Gene CNV Profiles	1.0	2.63497
S117	CCLE Cell Line Gene CNV Profiles	1.0	1.6888
IHH-4	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
VMRC-LCD	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.867076
CTCF	ENCODE Transcription Factor Targets	1.0	null
HUP-T4	COSMIC Cell Line Gene CNV Profiles	1.0	2.13708
SUM 229PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.82394
RS411	CCLE Cell Line Gene CNV Profiles	-1.0	-1.72677
NCIH647	CCLE Cell Line Gene CNV Profiles	1.0	1.68718
PF-382	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
NCI-H2081	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.987602
H3K79me2_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
KDM5A	ENCODE Transcription Factor Targets	1.0	null
HCC56	CCLE Cell Line Gene CNV Profiles	1.0	1.37457
NCI-H1437	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
KYSE-410	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
SU-DHL-6	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.41624
KYSE-140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.43899
HCC2157	CCLE Cell Line Gene CNV Profiles	1.0	1.69885
WM1552C	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
CAPAN1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.70812
UM-UC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23084
SNU-182	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.835611
HCC1143	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.3596
DKMG	CCLE Cell Line Gene CNV Profiles	-1.0	-1.65961
CAPAN-1	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
HDLM2	CCLE Cell Line Gene CNV Profiles	1.0	1.57725
JHOS2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.60612
105KC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0916
H3K36me3_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
POLR2A_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TM31	CCLE Cell Line Gene CNV Profiles	-1.0	-2.26517
HCC2270	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07948
HCC4017	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.12119
ACHN	CCLE Cell Line Gene CNV Profiles	-1.0	-1.6403
H2373	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
SNU738	CCLE Cell Line Gene CNV Profiles	-1.0	-1.4832
EP300	ENCODE Transcription Factor Targets	1.0	null
NCI-H727	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06409
CTCF_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BHLHE40_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SK-CO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28459
LB2241-RCC	COSMIC Cell Line Gene CNV Profiles	1.0	2.13708
NCI-H889	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.06196
SUPHD1	CCLE Cell Line Gene CNV Profiles	1.0	2.3627
NUGC4	CCLE Cell Line Gene CNV Profiles	1.0	1.4324
HUP-T4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.19301
NCI-H1838	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.12152
LBP-1	MotifMap Predicted Transcription Factor Targets	1.0	null
T84	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04328
NCI-H1930	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03645
AM-38	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
Neuro D	MotifMap Predicted Transcription Factor Targets	1.0	null
SNU119	CCLE Cell Line Gene CNV Profiles	1.0	1.57495
SKCO1	CCLE Cell Line Gene CNV Profiles	1.0	1.4663
EPLC-272H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.939527
SF268	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0002
EB2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.916077
HELA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.84784
KYSE410	CCLE Cell Line Gene CNV Profiles	-1.0	-1.90474
EP300_osteoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ABC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.904323
H2591	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
MOLP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.939527
HCC630	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.79471
NCI-H716	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07982
CAPAN-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.78546
MYC_MCF 10A_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
JHOS-2	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
LOX-IMVI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.938762
MIAPACA2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.38239
NCI-H322M	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
H3K36me3_fibroblast of dermis_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EBC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14167
MKN74	CCLE Cell Line Gene CNV Profiles	-1.0	-2.52589
EZH2	ENCODE Transcription Factor Targets	1.0	null
POLR2A	ENCODE Transcription Factor Targets	1.0	null
NOMO-1	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
NB4	CCLE Cell Line Gene CNV Profiles	1.0	1.71242
ME-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.44822
BT-549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.835611
ACHN	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
JJ012	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.963786
MOR	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00055
LN-18	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
H3K79me2_keratinocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
RS4-11	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
EJM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15035
NALM-6	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.78546
BT-474	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.884076
LXF-289	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.987602
H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.78546
NCI-H1703	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.893265
A-375	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.33517
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.25557
BICR78	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
1321N1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.75752
PANC0213	CCLE Cell Line Gene CNV Profiles	-1.0	-1.43852
PANC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07982
LCLC-103H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.71423
NCIH889	CCLE Cell Line Gene CNV Profiles	1.0	1.50315
HUH-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.12119
PLC/PRF/5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.847719
NCI-H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.78546
MG63	CCLE Cell Line Gene CNV Profiles	1.0	2.02415
KDM5A_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H4K20me1_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
HGC-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03723
NCI-H1437	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.78546
NCI-H1623	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10073
HCC4011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.78546
OVCAR-5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.886827
KYSE70	CCLE Cell Line Gene CNV Profiles	1.0	1.41068
ASPC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.936617
NCI-H920	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13139
NCI-H2023	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0002
MKN28	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
KYSE140	CCLE Cell Line Gene CNV Profiles	1.0	1.82622
HCC70	CCLE Cell Line Gene CNV Profiles	1.0	1.90327
MKN-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23358
STAT3	ENCODE Transcription Factor Targets	1.0	null
NCIH1876	CCLE Cell Line Gene CNV Profiles	1.0	1.79318
NCI-H146	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15035
143B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.861166
HCC2279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.915092
HCC1576	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0002
EZH2_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KYSE450	CCLE Cell Line Gene CNV Profiles	1.0	1.41884
U138MG	CCLE Cell Line Gene CNV Profiles	-1.0	-2.24983
KS1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36094
BC3C	CCLE Cell Line Gene CNV Profiles	1.0	1.35199
NCI-H1755	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
U-118-MG	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
LN-18	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.78546
SNU-449	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.78546
MYC	ENCODE Transcription Factor Targets	1.0	null
COV504	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.835611
NCI-H2373	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.78546
KYSE-70	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.39121
NOMO1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.7054
PF382	CCLE Cell Line Gene CNV Profiles	-1.0	-2.00474
U-87-MG	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
59M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.9793
NCIH322	CCLE Cell Line Gene CNV Profiles	-1.0	-2.0192
MDA-MB-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05843
SET2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.419
MG-63	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.21025
NCIH1755	CCLE Cell Line Gene CNV Profiles	-1.0	-1.59716
NCIH1437	CCLE Cell Line Gene CNV Profiles	-1.0	-3.00937
KS-1	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
HCC1263	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.835611
HEL	CCLE Cell Line Gene CNV Profiles	1.0	1.83243
OCI-LY-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.939527
KYSE-520	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07948
SNU-449	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
H3K79me2_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
HCC70	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.06932
H9	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.81559
BHLHE40	ENCODE Transcription Factor Targets	1.0	null
EFM-192A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.25091
U87MG	CCLE Cell Line Gene CNV Profiles	-1.0	-1.46736
HCC1599	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48972
HCC60	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.893265
NUGC-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.933665
KG1C	CCLE Cell Line Gene CNV Profiles	1.0	1.33091
IGR1	CCLE Cell Line Gene CNV Profiles	1.0	2.90531
BICR 78	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.78546
MIA PACA-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.78546
COLO 201	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.10162
NCI-H1882	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.60377
HUT78	CCLE Cell Line Gene CNV Profiles	-1.0	-1.78255