association	dataset	threshold value	standardized value
stem	GeneRIF Biological Term Annotations	1.0	null
OVCAR-3	COSMIC Cell Line Gene CNV Profiles	1.0	2.93899
RI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08886
GCIY	CCLE Cell Line Gene CNV Profiles	1.0	1.91171
AGS	CCLE Cell Line Gene CNV Profiles	1.0	1.44241
SW 948	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03175
HCC1011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09291
HCC78	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.25912
OV-90	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.89441
ONCODG1	CCLE Cell Line Gene CNV Profiles	1.0	2.34395
RERF-GC-1B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.8033
NIHOVCAR3	CCLE Cell Line Gene CNV Profiles	1.0	3.2803
NCI-H889	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32561
DETROIT 562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03175
NCIH1573	CCLE Cell Line Gene CNV Profiles	-1.0	-1.46456
HT1197	CCLE Cell Line Gene CNV Profiles	1.0	1.64947
YD15	CCLE Cell Line Gene CNV Profiles	-1.0	-1.42519
PCM6	CCLE Cell Line Gene CNV Profiles	-1.0	-2.41737
H2AFZ_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mir519a	GeneRIF Biological Term Annotations	1.0	null
SNU668	CCLE Cell Line Gene CNV Profiles	1.0	1.75154
thyroid	GeneRIF Biological Term Annotations	1.0	null
SW 403	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09291
EZH2_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
COLO 794	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.938795
SNU878	CCLE Cell Line Gene CNV Profiles	1.0	1.43933
YAPC	CCLE Cell Line Gene CNV Profiles	-1.0	-1.38459
EZH2_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BHY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.828248
KYSE510	CCLE Cell Line Gene CNV Profiles	1.0	1.72241
SW 1417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.952251
NCI-H1930	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.87525
suppressor	GeneRIF Biological Term Annotations	1.0	null
MCF10DCIS.COM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.865002
HCC515	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.972005
YAPC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.38305
CJM	CCLE Cell Line Gene CNV Profiles	1.0	1.35108
OVCAR-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.17004
c19mc	GeneRIF Biological Term Annotations	1.0	null
COV362	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.63823
NCIH1975	CCLE Cell Line Gene CNV Profiles	1.0	1.88375
NCI-H522	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.20758
epithelial	GeneRIF Biological Term Annotations	1.0	null
HS 746T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.862177
COLO-704	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.865002
NCI-H1573	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.1195
KARPAS299	CCLE Cell Line Gene CNV Profiles	-1.0	-2.20256
POLR2A	ENCODE Transcription Factor Targets	1.0	null
TK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.876167
CAL78	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32297
microrna	GeneRIF Biological Term Annotations	1.0	null
tumoursuppressor	GeneRIF Biological Term Annotations	1.0	null
SNU601	CCLE Cell Line Gene CNV Profiles	1.0	1.77585
NCI-H1944	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.06858
H3K27me3_K562_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RI1	CCLE Cell Line Gene CNV Profiles	1.0	1.50161
SU8686	CCLE Cell Line Gene CNV Profiles	-1.0	-1.52928
G44	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.11285
SET-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.62566
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
RL	CCLE Cell Line Gene CNV Profiles	-1.0	-2.46409
TMD8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.45215
BICR 31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.05715
EBC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.940593
A549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22046
HCC366	CCLE Cell Line Gene CNV Profiles	1.0	1.35035
effects	GeneRIF Biological Term Annotations	1.0	null
H3K27me3_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H1975	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22046
TFAP2C_01_312	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	1.28189
RERF-LC-OK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03175
chromosomal	GeneRIF Biological Term Annotations	1.0	null
KYSE-270	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09291
BICR31	CCLE Cell Line Gene CNV Profiles	1.0	2.06595
KP4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09291
Arsenic	CTD Gene-Chemical Interactions	1.0	null
EZH2	ENCODE Transcription Factor Targets	1.0	null
JEKO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.70249
oncomir	GeneRIF Biological Term Annotations	1.0	null
SNU-668	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.6701
NCI-N87	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22276
RT4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.88355
NCIH1781	CCLE Cell Line Gene CNV Profiles	-1.0	-1.86932
FOXA1	ENCODE Transcription Factor Targets	1.0	null
KMS-12-PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.94379
NCI-H226	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.88355
SCC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.17133
HPAC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21887
targeting	GeneRIF Biological Term Annotations	1.0	null
SNU-484	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.912952
A172	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22276
NCI-H1581	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26138
HCC827	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.828248
hur	GeneRIF Biological Term Annotations	1.0	null
KP4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33021
SKM1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.77835
HEC-1-A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0207
OVSAHO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.828248
HCC193	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.972005
rearrangements	GeneRIF Biological Term Annotations	1.0	null
KCI-MOH1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.44501
COV362	CCLE Cell Line Gene CNV Profiles	-1.0	-1.49553
relevance	GeneRIF Biological Term Annotations	1.0	null
clinicopathological	GeneRIF Biological Term Annotations	1.0	null
MEC2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.68778
mir517a	GeneRIF Biological Term Annotations	1.0	null
PA-TU-8988T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09291
NCI-H292	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.17133
POLR2A_H1-hESC_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H820	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.11285
NCI-H1355	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.921833
AGS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.17133
HS 936.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.24218
NCI-H146	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.01557
squamous	GeneRIF Biological Term Annotations	1.0	null
NCCSTCK140	CCLE Cell Line Gene CNV Profiles	1.0	1.41089
ONS76	CCLE Cell Line Gene CNV Profiles	-1.0	-1.46367
HCC1599	CCLE Cell Line Gene CNV Profiles	-1.0	-1.40807
JEKO1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.89616
SK-N-DZ	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.13122
NIH:OVCAR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.19301
KARPAS-620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.952251
CHL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.7591
HT1376	CCLE Cell Line Gene CNV Profiles	-1.0	-1.76374
mir519aand	GeneRIF Biological Term Annotations	1.0	null
inhibiting	GeneRIF Biological Term Annotations	1.0	null
activated	GeneRIF Biological Term Annotations	1.0	null
POLR2A_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PK59	CCLE Cell Line Gene CNV Profiles	1.0	1.50292
NCIH2286	CCLE Cell Line Gene CNV Profiles	-1.0	-1.77941
tumors	GeneRIF Biological Term Annotations	1.0	null
HCC4011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.884125
OVCA 420	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32561
G96	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.17643
NCI-H2023	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.93965
PC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.953199
H3K9me3_mammary epithelial cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
PANC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.44301
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03175
RERF-LC-KJ	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21887
RMUGS	CCLE Cell Line Gene CNV Profiles	1.0	1.53824
OCI-M2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.01863
NCI-H1437	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.883234
TEN	CCLE Cell Line Gene CNV Profiles	-1.0	-1.55763
COV413A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.7591
LXF-289	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.24218
G130	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.828248
H2AFZ_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
U-2932	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.62776
HUH6	CCLE Cell Line Gene CNV Profiles	1.0	2.51294
deregulation	GeneRIF Biological Term Annotations	1.0	null
KP-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.883234
OVISE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.01557
RL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.78929
ZR-75-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.941101
LCLC-97TM1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.912952
ovarian	GeneRIF Biological Term Annotations	1.0	null
COLO 699	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.24218
mir519	GeneRIF Biological Term Annotations	1.0	null
GCIY	COSMIC Cell Line Gene CNV Profiles	1.0	2.93899
RMUG-S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.31587
EPLC-272H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.30685
HCC33	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.50886
HCC78	CCLE Cell Line Gene CNV Profiles	1.0	1.43779
tumour	GeneRIF Biological Term Annotations	1.0	null
CHAGO-K-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.17133
MDAMB361	CCLE Cell Line Gene CNV Profiles	1.0	1.52063
serve	GeneRIF Biological Term Annotations	1.0	null
presence	GeneRIF Biological Term Annotations	1.0	null
NCI-H929	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.32739
A172	CCLE Cell Line Gene CNV Profiles	1.0	1.33956
ABC1	CCLE Cell Line Gene CNV Profiles	1.0	1.39474
EZH2_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCIH2170	CCLE Cell Line Gene CNV Profiles	1.0	1.45138
LCLC-103H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.985415
NCI-H1838	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.884125
MEC1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.55347
tamoxifen	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_H7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC4017	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.883234
NCI-H250	COSMIC Cell Line Gene CNV Profiles	1.0	2.93899
RCM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.30685
HGC-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.17643
required	GeneRIF Biological Term Annotations	1.0	null
growthpromoting	GeneRIF Biological Term Annotations	1.0	null
HCC1937	CCLE Cell Line Gene CNV Profiles	1.0	1.66204
breast	GeneRIF Biological Term Annotations	1.0	null
antisense	GeneRIF Biological Term Annotations	1.0	null
HGC27	CCLE Cell Line Gene CNV Profiles	-1.0	-1.58462
H3K27me3_Adipose Nuclei	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
HCC1569	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.24218
mir3713	GeneRIF Biological Term Annotations	1.0	null
network	GeneRIF Biological Term Annotations	1.0	null
OCI-LY-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.983006
COV413B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.70249
NCI-H187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.876167
subgroup	GeneRIF Biological Term Annotations	1.0	null
NCI-H23	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.884125
NCI-H2170	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32561
FOXA1_HepG2_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC1162	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55951
RMG-I	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.985108
NCIH2227	CCLE Cell Line Gene CNV Profiles	1.0	2.19757
adenomas	GeneRIF Biological Term Annotations	1.0	null
SKNDZ	CCLE Cell Line Gene CNV Profiles	-1.0	-2.09346
KYSE-510	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.941101
NCI-H1299	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.972005
laryngeal	GeneRIF Biological Term Annotations	1.0	null
specific	GeneRIF Biological Term Annotations	1.0	null
NCI-H1623	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32561
NCIH929	CCLE Cell Line Gene CNV Profiles	-1.0	-2.79524
mir5125p	GeneRIF Biological Term Annotations	1.0	null
T-47D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.884125
NCIH1581	CCLE Cell Line Gene CNV Profiles	-1.0	-1.60043
KARPAS-422	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2718
SW 780	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0043
resistance	GeneRIF Biological Term Annotations	1.0	null
conferring	GeneRIF Biological Term Annotations	1.0	null
YD10B	CCLE Cell Line Gene CNV Profiles	-1.0	-1.5192
therapeutic	GeneRIF Biological Term Annotations	1.0	null
LS123	CCLE Cell Line Gene CNV Profiles	1.0	1.40754
OVCAR4	CCLE Cell Line Gene CNV Profiles	1.0	2.04496
clusters	GeneRIF Biological Term Annotations	1.0	null