association	dataset	threshold value	standardized value
NUDUL1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.38311
HCC1143	CCLE Cell Line Gene CNV Profiles	1.0	3.2803
POLR2A	ENCODE Transcription Factor Targets	1.0	null
OCIMY7	CCLE Cell Line Gene CNV Profiles	-1.0	-1.4712
PANC 05.04	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.957909
NCIH1838	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33057
TE5	CCLE Cell Line Gene CNV Profiles	-1.0	-2.59447
oligopeptides	GeneRIF Biological Term Annotations	1.0	null
FADU	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.864131
KLE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03647
NCI-H1373	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05392
FOXC1	JASPAR Predicted Transcription Factor Targets	1.0	null
H2AFZ_osteoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC1162	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23989
SF1	MotifMap Predicted Transcription Factor Targets	1.0	null
H3K4me1_Fetal Lung	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
hsamir1279	GeneRIF Biological Term Annotations	1.0	null
cmyc	GeneRIF Biological Term Annotations	1.0	null
SNUC1	CCLE Cell Line Gene CNV Profiles	1.0	1.72916
Pbx-1	MotifMap Predicted Transcription Factor Targets	1.0	null
HCC1395	CCLE Cell Line Gene CNV Profiles	-1.0	-1.48257
HCC1937	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.39917
EJM	CCLE Cell Line Gene CNV Profiles	-1.0	-1.48417
linking	GeneRIF Biological Term Annotations	1.0	null
msh6	GeneRIF Biological Term Annotations	1.0	null
SUDHL1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.98562
HCC1359	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.958661
HCC515	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.825067
DOR 13	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.911684
species	GeneRIF Biological Term Annotations	1.0	null
YY1	MotifMap Predicted Transcription Factor Targets	1.0	null
NMCG1	CCLE Cell Line Gene CNV Profiles	1.0	1.34935
MG-63	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00505
NCIH650	CCLE Cell Line Gene CNV Profiles	1.0	1.86933
mir548m	GeneRIF Biological Term Annotations	1.0	null
NCI-H1648	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.57842
Neuro D	MotifMap Predicted Transcription Factor Targets	1.0	null
RP58	MotifMap Predicted Transcription Factor Targets	1.0	null
KNS-62	COSMIC Cell Line Gene CNV Profiles	1.0	2.49065
hdac6	GeneRIF Biological Term Annotations	1.0	null
HCC1187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.32262
HT-55	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03903
NCI-H1693	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.89864
OVCA 429	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07006
CORL23	CCLE Cell Line Gene CNV Profiles	1.0	1.37326
MDAMB361	CCLE Cell Line Gene CNV Profiles	-1.0	-1.76093
H3K9ac_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
A172	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29633
BT-549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09575
NCI-H727	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02412
RPMI7951	CCLE Cell Line Gene CNV Profiles	1.0	1.52207
COLO 829	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.864131
COV362	CCLE Cell Line Gene CNV Profiles	1.0	1.44751
oligonucleotides	GeneRIF Biological Term Annotations	1.0	null
CHD1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCIH1963	CCLE Cell Line Gene CNV Profiles	-1.0	-1.40406
UACC-812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.989294
SNU308	CCLE Cell Line Gene CNV Profiles	1.0	1.38103
H3K4me1_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
MS751	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.78697
animal	GeneRIF Biological Term Annotations	1.0	null
OVCAR-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.872636
EPLC-272H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00439
CEBPB_IMR-90_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
encoding	GeneRIF Biological Term Annotations	1.0	null
NCIH727	CCLE Cell Line Gene CNV Profiles	-1.0	-2.20312
FOXL1	JASPAR Predicted Transcription Factor Targets	1.0	null
BEN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.39858
NCI-N417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.39794
LUDLU1	CCLE Cell Line Gene CNV Profiles	1.0	1.63812
COLO680N	CCLE Cell Line Gene CNV Profiles	1.0	2.59998
MX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11722
SCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.864789
HCC193	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.63518
OCI-M1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04635
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
LBP-1	MotifMap Predicted Transcription Factor Targets	1.0	null
lymphoma	GeneRIF Biological Term Annotations	1.0	null
MDA-MB-175-VII	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.864613
EB2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.39544
triggered	GeneRIF Biological Term Annotations	1.0	null
SNU-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03903
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.69351
KYSE-270	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.864789
IGR1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.53952
H3K4me2_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
COLO 800	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.39917
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
SW780	CCLE Cell Line Gene CNV Profiles	-1.0	-1.80977
H3K27me3_fibroblast of dermis_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
lines	GeneRIF Biological Term Annotations	1.0	null
PK-8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.49469
U2OS	CCLE Cell Line Gene CNV Profiles	1.0	2.06828
NCI-H2795	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.57842
EVSA-T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.850156
SKLU1	CCLE Cell Line Gene CNV Profiles	1.0	1.88773
OV56	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.864613
SKBR3	CCLE Cell Line Gene CNV Profiles	-1.0	-1.41654
NCIH1930	CCLE Cell Line Gene CNV Profiles	-1.0	-2.3514
SUM 52PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.53826
SK-MEL-31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22814
EFM-192C	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.825829
POLR2AphosphoS5_neural cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RMUG-S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12759
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.88078
NCI-SNU-5	COSMIC Cell Line Gene CNV Profiles	1.0	2.49065
FU97	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22814
SIHA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.69266
SW 403	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.5411
G121	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22814
EVSAT	CCLE Cell Line Gene CNV Profiles	1.0	1.60705
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.89864
ptpn12	GeneRIF Biological Term Annotations	1.0	null
DMS 273	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.86167
MPP89	CCLE Cell Line Gene CNV Profiles	-1.0	-1.6159
homologous	GeneRIF Biological Term Annotations	1.0	null
MFE280	CCLE Cell Line Gene CNV Profiles	1.0	1.48275
upregulation	GeneRIF Biological Term Annotations	1.0	null
HCC2911	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00521
NURR1	MotifMap Predicted Transcription Factor Targets	1.0	null
RERFLCAD2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.71598
mrnas	GeneRIF Biological Term Annotations	1.0	null
LOU-NH91	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13629
HARA	CCLE Cell Line Gene CNV Profiles	1.0	1.36623
RCM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.31368
KYSE520	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33419
SKMES1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36753
HUH7	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
OAW28	CCLE Cell Line Gene CNV Profiles	1.0	2.10505
H3K4me3_Pancreatic Islets	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
NCIH2009	CCLE Cell Line Gene CNV Profiles	-1.0	-1.67761
JHOS4	CCLE Cell Line Gene CNV Profiles	1.0	2.36415
consist	GeneRIF Biological Term Annotations	1.0	null
SQ1	CCLE Cell Line Gene CNV Profiles	1.0	1.77085
537 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.39858
BFTC905	CCLE Cell Line Gene CNV Profiles	-1.0	-1.48902
CHD1	ENCODE Transcription Factor Targets	1.0	null
MDA-MB-415	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48847
624 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.37195
CAL851	CCLE Cell Line Gene CNV Profiles	1.0	1.63456
CEBPB_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
143B	CCLE Cell Line Gene CNV Profiles	1.0	1.53011
HCC1011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.864789
subsequent	GeneRIF Biological Term Annotations	1.0	null
C32TG	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05392
PCI-15A	COSMIC Cell Line Gene CNV Profiles	1.0	2.49065
HCC1395	COSMIC Cell Line Gene CNV Profiles	1.0	2.49065
MOLM-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.27895
NCIH716	CCLE Cell Line Gene CNV Profiles	-1.0	-2.09288
H3255	COSMIC Cell Line Gene CNV Profiles	1.0	2.49065
zeb1	GeneRIF Biological Term Annotations	1.0	null
CEBPB	ENCODE Transcription Factor Targets	1.0	null
CAL-85-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.14527
HCC1143	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03903
A172	CCLE Cell Line Gene CNV Profiles	-1.0	-1.88937
similar	GeneRIF Biological Term Annotations	1.0	null
JEKO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12759
MOLP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00439
LC1SQSF	CCLE Cell Line Gene CNV Profiles	1.0	1.44751
HCC2279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.35674
HCC95	CCLE Cell Line Gene CNV Profiles	1.0	1.65454
SCABER	CCLE Cell Line Gene CNV Profiles	-1.0	-1.59732
different	GeneRIF Biological Term Annotations	1.0	null
CPCN	CCLE Cell Line Gene CNV Profiles	1.0	2.11645
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.96285
SW1783	COSMIC Cell Line Gene CNV Profiles	1.0	2.49065
OV7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.911684
HUH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.57842
PK-59	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12759
OE33	COSMIC Cell Line Gene CNV Profiles	1.0	2.49065
HOXA5	JASPAR Predicted Transcription Factor Targets	1.0	null
H2AFZ_CD14-positive monocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
orthologous	GeneRIF Biological Term Annotations	1.0	null
CH157MN	CCLE Cell Line Gene CNV Profiles	1.0	1.41865
sustained	GeneRIF Biological Term Annotations	1.0	null
COLO-783	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.897282
RERFLCSQ1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.60827
NCIH3255	CCLE Cell Line Gene CNV Profiles	-1.0	-1.91567
NCI-H2073	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21813
sites	GeneRIF Biological Term Annotations	1.0	null
NCIH747	CCLE Cell Line Gene CNV Profiles	1.0	1.86259
ZR-75-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.911684
stroma	GeneRIF Biological Term Annotations	1.0	null
STAT4	MotifMap Predicted Transcription Factor Targets	1.0	null
POLR2A_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ME-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03647
survival	GeneRIF Biological Term Annotations	1.0	null
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.17731
NCI-H596	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.864131
JHOS2	CCLE Cell Line Gene CNV Profiles	1.0	1.49117
928 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.897282
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00439
loop	GeneRIF Biological Term Annotations	1.0	null
EB1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.7581
downregulation	GeneRIF Biological Term Annotations	1.0	null
feedforward	GeneRIF Biological Term Annotations	1.0	null