association	dataset	threshold value	standardized value
burkitt lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.174881
biomarker	GeneRIF Biological Term Annotations	1.0	null
biliary epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.332294
SW 403	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.69678
demonstrates	GeneRIF Biological Term Annotations	1.0	null
KE39	CCLE Cell Line Gene CNV Profiles	-1.0	-1.76594
POLR2A_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.44379
16934749-Table3	GeneSigDB Published Gene Signatures	1.0	null
POLR2A_H1-hESC_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ductal carcinoma in situ	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.237009
bronchoalveolar stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.13191
lung small cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.411283
src	GeneRIF Biological Term Annotations	1.0	null
G121	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26526
NCI-H1373	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04255
carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.512957
POLR2A_endothelial cell of umbilical vein_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HT-55	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03005
NCI-H1435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13299
H3K36me3_brain_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SNU-C1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09043
bile duct epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.410111
POLR2AphosphoS2_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Stomach Neoplasms	HuGE Navigator Gene-Phenotype Associations	1.0	null
enhancer	GeneRIF Biological Term Annotations	1.0	null
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.89221
mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.100886
nci-h460 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.612958
H3K27me3_megakaryocyte_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
endometrial cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.429165
MG-63	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.987082
alimentary canal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.075718
wide	GeneRIF Biological Term Annotations	1.0	null
RB1_KD_GSE50532_623_human_OSTEOBLASTS	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
POLR2A_MCF-7_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
squamous cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.411657
NCI-H2009	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.93929
bile duct	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.159317
thus	GeneRIF Biological Term Annotations	1.0	null
organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.050367
LOU-NH91	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14373
NCI-H650	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.01969
epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.104231
integument	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.308251
OCI-M1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03393
tissue	GeneRIF Biological Term Annotations	1.0	null
SKLU1	CCLE Cell Line Gene CNV Profiles	1.0	2.02126
epithelioma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.602892
provided	GeneRIF Biological Term Annotations	1.0	null
TEF-1	MotifMap Predicted Transcription Factor Targets	1.0	null
20485376-TableS3	GeneSigDB Published Gene Signatures	1.0	null
lung cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.304142
WHSC1	ENCODE Transcription Factor Targets	1.0	null
disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.735027
define	GeneRIF Biological Term Annotations	1.0	null
hepatocellular carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.225229
viral infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.047992
kaposi's sarcoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.160203
activities	GeneRIF Biological Term Annotations	1.0	null
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19629
functions	GeneRIF Biological Term Annotations	1.0	null
hematopoietic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053354
cholangiocyte	GeneRIF Biological Term Annotations	1.0	null
STAT3_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
19895320-Table2	GeneSigDB Published Gene Signatures	1.0	null
H3K36me3_liver_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EZH2	ENCODE Transcription Factor Targets	1.0	null
zeste	GeneRIF Biological Term Annotations	1.0	null
late endosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.185777
proinflammatory	GeneRIF Biological Term Annotations	1.0	null
WHSC1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CMK115	CCLE Cell Line Gene CNV Profiles	1.0	1.56542
42-MG-BA	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.93929
COLO 800	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.45604
G96	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.89221
blood	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053087
small cell lung cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.677395
PANC 05.04	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.941728
H3K36me3_ES-E14_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KDM5B_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
extracellular organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.126291
correlated	GeneRIF Biological Term Annotations	1.0	null
central nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.043828
SNU5	CCLE Cell Line Gene CNV Profiles	1.0	1.47058
increase	GeneRIF Biological Term Annotations	1.0	null
19924232-TableS1	GeneSigDB Published Gene Signatures	1.0	null
SW 1463	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26526
newly	GeneRIF Biological Term Annotations	1.0	null
HCC44	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.7328
disease of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.192031
sclera	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.501182
POLR2A_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC2911	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.992541
RMUG-S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13299
NCI-H1693	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.32384
vitamin	GeneRIF Biological Term Annotations	1.0	null
mir98	GeneRIF Biological Term Annotations	1.0	null
therapeutic	GeneRIF Biological Term Annotations	1.0	null
Precancerous Conditions	CTD Gene-Disease Associations	1.0	2.88009
HCC366	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.31976
epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.243605
HCC2279	CCLE Cell Line Gene CNV Profiles	-1.0	-1.68567
Genetic Predisposition to Disease	HuGE Navigator Gene-Phenotype Associations	1.0	null
reduces	GeneRIF Biological Term Annotations	1.0	null
POLR2A_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KDM5B	ChEA Transcription Factor Targets	1.0	null
H3K36me3_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
G292CLONEA141B1	CCLE Cell Line Gene CNV Profiles	1.0	1.51294
EZH2_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
effectively	GeneRIF Biological Term Annotations	1.0	null
eye	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.061713
gastrointestinal tract	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.076731
pgrmc1	GeneRIF Biological Term Annotations	1.0	null
membrane-bounded vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.052504
NCI-H727	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.01342
blood cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.05552
HCC827	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.925791
timp3	GeneRIF Biological Term Annotations	1.0	null
angiogenesis	GeneRIF Biological Term Annotations	1.0	null
cancers	GeneRIF Biological Term Annotations	1.0	null
FU97	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26526
pre-malignant neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.172544
alk4	GeneRIF Biological Term Annotations	1.0	null
skov-3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.321685
H4K20me1_HeLa-S3_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
innate	GeneRIF Biological Term Annotations	1.0	null
relevant	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_fibroblast of dermis_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
COV362	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19629
SKBR3	CCLE Cell Line Gene CNV Profiles	1.0	1.37041
CTCF_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
POLR2AphosphoS2_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
inhibit	GeneRIF Biological Term Annotations	1.0	null
adenocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.389666
HCC1187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28178
NCIH2073	CCLE Cell Line Gene CNV Profiles	-1.0	-1.43735
organ system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.51919
cholangiocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.501965
lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.053122
H3K36me3_small intestine_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
viscus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.063448
SIHA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.85856
lung adenocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.102482
chromosomal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.071315
SK-MEL-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.62023
extracellular region	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.17687
mmp11	GeneRIF Biological Term Annotations	1.0	null
esophageal cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.507849
challenge	GeneRIF Biological Term Annotations	1.0	null
carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.603697
respiratory system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.398216
esophageal	GeneRIF Biological Term Annotations	1.0	null
cycle	GeneRIF Biological Term Annotations	1.0	null
POLR2AphosphoS2_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
U2OS	CCLE Cell Line Gene CNV Profiles	1.0	1.69053
H3K36me3_heart_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MDA-MB-415	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.64039
refractive error	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.233878
20485376-TableS4	GeneSigDB Published Gene Signatures	1.0	null
H3K4me1_megakaryocyte_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
extracellular region part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.052189
posttranscriptionally	GeneRIF Biological Term Annotations	1.0	null
18812439-Table1	GeneSigDB Published Gene Signatures	1.0	null
link	GeneRIF Biological Term Annotations	1.0	null
breast	GeneRIF Biological Term Annotations	1.0	null
ezh2specific	GeneRIF Biological Term Annotations	1.0	null
NCIH1568	CCLE Cell Line Gene CNV Profiles	-1.0	-1.5467
cyp19a1	GeneRIF Biological Term Annotations	1.0	null
uterine adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.54217
head	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051045
myopia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.325552
KDM5B	ENCODE Transcription Factor Targets	1.0	null
STAT3	ENCODE Transcription Factor Targets	1.0	null
sensory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.051855
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28178
POLR2A_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.070892
endocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.220152
tissues, cell types and enzyme sources	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.696989
tp53	GeneRIF Biological Term Annotations	1.0	null
extracellular vesicular exosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.339261
targeting	GeneRIF Biological Term Annotations	1.0	null
lymphoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.065931
MDA-MB-175-VII	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.843396
uterine adenocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.192123
NCIH1651	CCLE Cell Line Gene CNV Profiles	1.0	1.93481
intracellular part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.04177
POLR2AphosphoS2_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
breast carcinoma in situ	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.233183
animal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.686368
GLC82	CCLE Cell Line Gene CNV Profiles	1.0	1.60083
gastric cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.157121
cell part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041295
m cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.299601
extracellular vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.339261
H3K36me3_CH12.LX_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cytosolic ribosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.505537
confer	GeneRIF Biological Term Annotations	1.0	null
scleral disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.714005
fus1	GeneRIF Biological Term Annotations	1.0	null
G44	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.845866
bronchus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.080205
HCC89	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26725
H3K36me3_MCF-7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
POLR2A	ENCODE Transcription Factor Targets	1.0	null
HCC202	CCLE Cell Line Gene CNV Profiles	1.0	3.2803
HCC1143	CCLE Cell Line Gene CNV Profiles	-1.0	-2.09133
HN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.831291
non-small cell lung adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.713779
MFM-223	COSMIC Cell Line Gene CNV Profiles	1.0	2.14702
reducing	GeneRIF Biological Term Annotations	1.0	null
intestinal epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.11448
reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.060482
T47D	CCLE Cell Line Gene CNV Profiles	1.0	1.44848
evidence	GeneRIF Biological Term Annotations	1.0	null
LXF-289	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.939826
ONCODG1	CCLE Cell Line Gene CNV Profiles	1.0	2.21702
nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.047062
described	GeneRIF Biological Term Annotations	1.0	null
parvum	GeneRIF Biological Term Annotations	1.0	null
bronchoalveolar system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.062024
severe acute respiratory syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.412779
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.85954
targeted	GeneRIF Biological Term Annotations	1.0	null
NCIH747	CCLE Cell Line Gene CNV Profiles	-1.0	-1.84946
prbe2f	GeneRIF Biological Term Annotations	1.0	null
survival	GeneRIF Biological Term Annotations	1.0	null
RB1_KD_GSE50532_656_human_OSTEOBLASTS	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
H3K36me3_spleen_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
non-hodgkin lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.061323
DMS 273	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.975269
EBC1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.31994
small cell lung cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.128382
dementia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.202946
UACC-812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.975269
NCI-H3122	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.93929
KLE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02719
JHH6	CCLE Cell Line Gene CNV Profiles	-1.0	-1.5518
lung	GeneRIF Biological Term Annotations	1.0	null
three	GeneRIF Biological Term Annotations	1.0	null
CTCF	ENCODE Transcription Factor Targets	1.0	null
bronchial epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.24486
H3K36me3_MEL cell line_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
transition	GeneRIF Biological Term Annotations	1.0	null
SK-MEL-31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26526
esophagus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.129666
HDAC6_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12038
ovary	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.063851
vitro	GeneRIF Biological Term Annotations	1.0	null
lymphoid cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.070423
ovary cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.077925
virion part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.08142
HDAC2_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MDA-MB-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02719
ovary adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.260945
process	GeneRIF Biological Term Annotations	1.0	null
HCC202	COSMIC Cell Line Gene CNV Profiles	1.0	2.14702
large cell lung cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.587228
COV362	CCLE Cell Line Gene CNV Profiles	1.0	1.33933
SCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.831291
EP300_MEL cell line_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
OVCA 429	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.06514
endometrial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.414293
sense organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.056581
Liver Neoplasms, Experimental	CTD Gene-Disease Associations	1.0	2.88009
SNU308	CCLE Cell Line Gene CNV Profiles	-1.0	-1.61117
viral capsid	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.196669
pyrazinamide_mus musculus_gpl6246_gse48027	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
MDAMB361	CCLE Cell Line Gene CNV Profiles	1.0	1.77206
pgr	GeneRIF Biological Term Annotations	1.0	null
lymphoid tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.05525
normal	GeneRIF Biological Term Annotations	1.0	null
regulated	GeneRIF Biological Term Annotations	1.0	null
NCIH650	CCLE Cell Line Gene CNV Profiles	-1.0	-2.20312
reticulum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.322779
lung carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.29118
ETS1_MEL cell line_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
highly	GeneRIF Biological Term Annotations	1.0	null
melanoma	GeneRIF Biological Term Annotations	1.0	null
lung	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.421148
induced	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
HCC2157	CCLE Cell Line Gene CNV Profiles	1.0	1.58947
immune	GeneRIF Biological Term Annotations	1.0	null
HCC1143	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.37515
COR-L311	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.93929
H3K27ac_osteoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.986331
HCC1359	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.942529
demonstrate	GeneRIF Biological Term Annotations	1.0	null
paraffinembedded	GeneRIF Biological Term Annotations	1.0	null
tlrmediated	GeneRIF Biological Term Annotations	1.0	null
intracellular membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.04725
H3K36me3_kidney_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
928 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.877296
HDAC2	ENCODE Transcription Factor Targets	1.0	null
female reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.055693
lung cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.636785
MIAPACA2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.51651
mir181a	GeneRIF Biological Term Annotations	1.0	null
mature b-cell neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.105548
H4K20me1_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
part	GeneRIF Biological Term Annotations	1.0	null
POLR2A_MEL cell line_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
POLR2A_HeLa-S3_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
disease by infectious agent	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.040961
musculoskeletal system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.042352
effects	GeneRIF Biological Term Annotations	1.0	null
LUDLU1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.3959
ovary cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.073612
gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054151
MOLP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.986331
female reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.064389
REST_01_337	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.61167
Kidney Diseases	CTD Gene-Disease Associations	1.0	1.05648
SW 1417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.831291
H3K36me3_ES-Bruce4_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
influence	GeneRIF Biological Term Annotations	1.0	null
regulators	GeneRIF Biological Term Annotations	1.0	null
downregulates	GeneRIF Biological Term Annotations	1.0	null
non-membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.04959
HUH7	CCLE Cell Line Gene CNV Profiles	1.0	2.07817
20068076-SuppTable9c	GeneSigDB Published Gene Signatures	1.0	null
lupus	GeneRIF Biological Term Annotations	1.0	null
cbl	GeneRIF Biological Term Annotations	1.0	null
efficacy	GeneRIF Biological Term Annotations	1.0	null
immune system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.042668
EFM-192A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.54249
H3K4me1_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
hematologic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.043706
eye and adnexa disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.054158
POLR2AphosphoS2_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
acts	GeneRIF Biological Term Annotations	1.0	null
NCIH727	CCLE Cell Line Gene CNV Profiles	1.0	1.33208
fasmediated	GeneRIF Biological Term Annotations	1.0	null
TGM2_KD_GSE23702_715_human_NB4 cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.684692
SHP77	CCLE Cell Line Gene CNV Profiles	1.0	2.59998
internal female genital organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.074849
endosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.245323
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.864262
EP300	ENCODE Transcription Factor Targets	1.0	null
NCI-H650	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.93929
POLR2A_K562_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
namalwa cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.757018
fibrillar collagen trimer	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.116742
MS751	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.97102
NCI-H596	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.830573
H3K4me1_megakaryocyte_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
H3K36me3_NT2-D1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
burkitt lymphoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.130078
SQ1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.7086
uterine endometrium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.181658
menstrual	GeneRIF Biological Term Annotations	1.0	null
a549	GeneRIF Biological Term Annotations	1.0	null
regulatory	GeneRIF Biological Term Annotations	1.0	null
liver cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.203933
b-cell lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.072205
decreased	GeneRIF Biological Term Annotations	1.0	null
20448109-Table1a	GeneSigDB Published Gene Signatures	1.0	null
inhibiting	GeneRIF Biological Term Annotations	1.0	null
OV7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.8926
specific	GeneRIF Biological Term Annotations	1.0	null
metastasis	GeneRIF Biological Term Annotations	1.0	null
HDQ-P1	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.93929
EB1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.93528
collagen trimer	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.06746
KYSE-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09043
formalinfixed	GeneRIF Biological Term Annotations	1.0	null
viral nucleocapsid	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.430647
DANG	CCLE Cell Line Gene CNV Profiles	-1.0	-1.51651
SK-MEL-3	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.93929
H3K36me3_U2OS_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HUP-T4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23692
CHD7	ENCODE Transcription Factor Targets	1.0	null
C2BBE1	CCLE Cell Line Gene CNV Profiles	1.0	1.86572
invasion	GeneRIF Biological Term Annotations	1.0	null
FADU	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.830573
forestomach	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.214954
membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.051919
POLR2A_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PK-59	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13299
NIH:OVCAR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.14149
uterus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.103425
LMSU	CCLE Cell Line Gene CNV Profiles	1.0	1.82656
states	GeneRIF Biological Term Annotations	1.0	null
RPMI7951	CCLE Cell Line Gene CNV Profiles	1.0	1.46624
carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.162908
extracellular membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.339261
infection	GeneRIF Biological Term Annotations	1.0	null
HDAC6	ENCODE Transcription Factor Targets	1.0	null
microrna98	GeneRIF Biological Term Annotations	1.0	null
enhanced	GeneRIF Biological Term Annotations	1.0	null
scleral staphyloma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.54893
methylprednisolone	GeneRIF Biological Term Annotations	1.0	null
EW8	CCLE Cell Line Gene CNV Profiles	1.0	1.65183
microrna214	GeneRIF Biological Term Annotations	1.0	null
bronchial epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.106725
ishikawa cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.578816
proliferation	GeneRIF Biological Term Annotations	1.0	null
SK23	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.28608
lung cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.158393
LN443	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36723
IGR1	CCLE Cell Line Gene CNV Profiles	1.0	1.40764
glioma	GeneRIF Biological Term Annotations	1.0	null
prostate	GeneRIF Biological Term Annotations	1.0	null
TT	CCLE Cell Line Gene CNV Profiles	-1.0	-1.86864
NCI-N417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.51945
epigallocatechin3gallate	GeneRIF Biological Term Annotations	1.0	null
urogenital system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.057748
COLO-783	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.877296
hmga2	GeneRIF Biological Term Annotations	1.0	null
endometrial	GeneRIF Biological Term Annotations	1.0	null
ETS1	ENCODE Transcription Factor Targets	1.0	null
protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041269
intestine	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054509
cell type cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.240148
homology	GeneRIF Biological Term Annotations	1.0	null
mir1883p	GeneRIF Biological Term Annotations	1.0	null
dexamethasone_homo sapiens_gpl6244_gse20963	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
lymphoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.071419
their	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_megakaryocyte_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
alzheimer's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.206248
H3K36me3_thymus_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
inhibited	GeneRIF Biological Term Annotations	1.0	null
adult stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.077024
cellular	GeneRIF Biological Term Annotations	1.0	null
collagen type ii trimer	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.343421
liver	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.068141
exosome (rnase complex)	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.338884
fas	GeneRIF Biological Term Annotations	1.0	null
repressed	GeneRIF Biological Term Annotations	1.0	null
ovarian	GeneRIF Biological Term Annotations	1.0	null
MOLM-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.33786
cognitive disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.061818
intracellular non-membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.050336
non-small cell lung carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.331391
range	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_fibroblast of lung_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
in situ carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.192031
intracellular organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.048302
H3K36me3_splenic B cell_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
macromolecular complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041877
ZR-75-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.8926
neurodegenerative disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.058776
HCC1162	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28178
large cell carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.198462
Gastritis, Atrophic	HuGE Navigator Gene-Phenotype Associations	1.0	null
squamous	GeneRIF Biological Term Annotations	1.0	null
hematopoietic system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052673
ovary cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.084886
cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.719654
H3K4me1_G1E-ER4_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
HCC1599	CCLE Cell Line Gene CNV Profiles	-1.0	-2.00522
19924232-TableS2	GeneSigDB Published Gene Signatures	1.0	null
PXR (PXR:RXR)	MotifMap Predicted Transcription Factor Targets	1.0	null
DOR 13	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.8926
NCIH1703	CCLE Cell Line Gene CNV Profiles	-1.0	-1.38542
targets	GeneRIF Biological Term Annotations	1.0	null
extracellular matrix part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.052851
p53	GeneRIF Biological Term Annotations	1.0	null
a-549 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.7146
POLR2AphosphoS5_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
OV56	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.843396
connective tissue cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.042939
suggesting	GeneRIF Biological Term Annotations	1.0	null
rkipmir98	GeneRIF Biological Term Annotations	1.0	null
TM31	CCLE Cell Line Gene CNV Profiles	1.0	1.49291
uterine cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.166364
UMUC3	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34857
KDM5B-21448134-MESC-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
gastric cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.164359
lung adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.436055
nsclc	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_MEL cell line_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
biliary epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.956859
cis	GeneRIF Biological Term Annotations	1.0	null
RB1_KD_GSE50532_657_human_OSTEOBLASTS	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
HCC38	CCLE Cell Line Gene CNV Profiles	-1.0	-2.3514
OCI-LY-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.986331
let7	GeneRIF Biological Term Annotations	1.0	null
bgc-823 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.654212
let7mir98	GeneRIF Biological Term Annotations	1.0	null
into	GeneRIF Biological Term Annotations	1.0	null
lymphoid cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.057345
burkitt lymphoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.126441
ME-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02719
CHD7_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HOP62	CCLE Cell Line Gene CNV Profiles	1.0	1.72536
xlinked	GeneRIF Biological Term Annotations	1.0	null
epithelial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.457987
cytokineinducible	GeneRIF Biological Term Annotations	1.0	null
Lung Neoplasms	CTD Gene-Disease Associations	1.0	1.16203
cisplatin	GeneRIF Biological Term Annotations	1.0	null
NCI-H820	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.845866
CH157MN	CCLE Cell Line Gene CNV Profiles	-1.0	-1.43024
gastrointestinal system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.163729
143B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.21997
JHH2	CCLE Cell Line Gene CNV Profiles	-1.0	-2.59447
followed	GeneRIF Biological Term Annotations	1.0	null
klinefelter's syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.233183
LOX-IMVI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.987082
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.43611
sensitivity	GeneRIF Biological Term Annotations	1.0	null
HEYA8	CCLE Cell Line Gene CNV Profiles	-1.0	-1.3204
ribonucleoprotein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.049364
tauopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.204923
ddx3x	GeneRIF Biological Term Annotations	1.0	null
esophageal epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.146769
whole body	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.688
cytosolic part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.067139
gastric cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.223177
JHOS2	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
HCC202	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.10946
NURR1	MotifMap Predicted Transcription Factor Targets	1.0	null
genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.042076
POLR2A_HGPS cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC38	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09043
NCI-H2030	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.50125
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.939826
hgc-27 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.956428
H3K27ac_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me1_mammary epithelial cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
provide	GeneRIF Biological Term Annotations	1.0	null
mirnas	GeneRIF Biological Term Annotations	1.0	null
COLO 201	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.830573
lung cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.705583
disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.158434
il6	GeneRIF Biological Term Annotations	1.0	null
UM-UC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.37515
bronchogenic carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.28887
respiratory epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.07093
eye disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.056294
liver carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.222822
EVSA-T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.828404
epithelial	GeneRIF Biological Term Annotations	1.0	null
migration	GeneRIF Biological Term Annotations	1.0	null
SW 780	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.942529
ribosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.123911
non-small cell lung cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.812726
HCC70	CCLE Cell Line Gene CNV Profiles	-1.0	-1.46871
microbial	GeneRIF Biological Term Annotations	1.0	null
esophageal squamous cell carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.609332
vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.051803
digestive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.060451
mir453	GeneRIF Biological Term Annotations	1.0	null
Breast Neoplasms	HuGE Navigator Gene-Phenotype Associations	1.0	null
apoptosis	GeneRIF Biological Term Annotations	1.0	null
FU97	CCLE Cell Line Gene CNV Profiles	1.0	1.39942
20406893-Table1b	GeneSigDB Published Gene Signatures	1.0	null
respiratory system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.404418
increases	GeneRIF Biological Term Annotations	1.0	null
negative	GeneRIF Biological Term Annotations	1.0	null
cytoplasmic part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.042831
cellular_component	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.209858
homolog	GeneRIF Biological Term Annotations	1.0	null
non-small cell lung cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.34371
stomach	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.137751
NIHOVCAR3	CCLE Cell Line Gene CNV Profiles	1.0	2.35172
VCAP	CCLE Cell Line Gene CNV Profiles	-1.0	-1.63636
regulate	GeneRIF Biological Term Annotations	1.0	null
20068076-Table2	GeneSigDB Published Gene Signatures	1.0	null
socs	GeneRIF Biological Term Annotations	1.0	null