association	dataset	threshold value	standardized value
HCC38	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.902234
fallopian tube	GTEx Tissue Gene Expression Profiles	1.0	0.84203
NCI-H196	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02106
ZR-75-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.941962
L33	CCLE Cell Line Gene CNV Profiles	-1.0	-1.93024
769P	CCLE Cell Line Gene CNV Profiles	-1.0	-1.37368
DMS53	CCLE Cell Line Gene CNV Profiles	1.0	1.5885
RH30	CCLE Cell Line Gene CNV Profiles	1.0	2.39925
CAOV3	CCLE Cell Line Gene CNV Profiles	1.0	1.76746
RERF-GC-1B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.32076
NCIH211	CCLE Cell Line Gene CNV Profiles	1.0	1.71904
MHH-NB-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.33034
Neuro D	MotifMap Predicted Transcription Factor Targets	1.0	null
KYSE-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.892575
KMS28BM	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34023
G44	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.10962
NUGC-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.973475
PSN1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.41754
CAL-72	COSMIC Cell Line Gene CNV Profiles	1.0	2.13646
NCIH1693	CCLE Cell Line Gene CNV Profiles	1.0	1.55376
Psoriasis vulgaris_Skin tissue_GSE14905	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.19224
HCC1395	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.73585
RMG-I	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.25119
GRANTA519	CCLE Cell Line Gene CNV Profiles	-1.0	-1.37999
RERF-LC-KJ	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.50467
143B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.34315
G122	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21885
COV504	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.48587
MDA-MB-175-VII	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29618
C3A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.6823
HBL-100	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02901
143B	CCLE Cell Line Gene CNV Profiles	-1.0	-2.00244
MKN7	CCLE Cell Line Gene CNV Profiles	1.0	1.87785
MOLM-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.824518
KMRC2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.74096
GRANTA-519	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.37742
MyoD	MotifMap Predicted Transcription Factor Targets	1.0	null
SK-MEL-31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.983067
NCI-H510A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.53734
MDA-MB-330	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.99644
C2BBE1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.951792
SW 837	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14485
IALM	CCLE Cell Line Gene CNV Profiles	1.0	1.60212
COV504	CCLE Cell Line Gene CNV Profiles	-1.0	-2.3514
DOV13	CCLE Cell Line Gene CNV Profiles	1.0	1.64069
Simian Acquired Immune Deficiency Syndrome_T lymphocyte_GSE4785	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.45247
PANC0203	CCLE Cell Line Gene CNV Profiles	-1.0	-1.395
YY1	MotifMap Predicted Transcription Factor Targets	1.0	null
KMS-28PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.21595
E2A	MotifMap Predicted Transcription Factor Targets	1.0	null
COLO 205	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.902234
NCI-H345	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.87201
MS751	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06532
HCC1011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-3.64378
RERFLCKJ	CCLE Cell Line Gene CNV Profiles	1.0	1.94448
CFPAC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.957957
HCC2279	CCLE Cell Line Gene CNV Profiles	1.0	2.1437
NCIH226	CCLE Cell Line Gene CNV Profiles	-1.0	-1.57434
MEL-HO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02901
NCI-N417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00503
NCIH1299	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39218
DMS 53	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.62293
G96	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.02428
LB647-SCLC	COSMIC Cell Line Gene CNV Profiles	1.0	2.13646
HEB	MotifMap Predicted Transcription Factor Targets	1.0	null
COLO-824	COSMIC Cell Line Gene CNV Profiles	1.0	2.13646
LP-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10262
MDST8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.852271
YAPC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.863576
PK-45H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.42267
769-P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.837932
HCC827	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.53734
CAKI-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.96739
CAKI2	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
MHH-ES-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.24916
RERFGC1B	CCLE Cell Line Gene CNV Profiles	-1.0	-1.59559
BV-173	Sanger Dependency Map Cancer Cell Line Proteomics	-1.0	-2.85398
MDA-MB-330	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.97366
KPL-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07744
BICR31	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34336
CHP-212	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.44013
VMRCRCW	CCLE Cell Line Gene CNV Profiles	-1.0	-1.70635
G141	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.854894
EPLC-272H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02992
NCI-H2595	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.957957
HCC78	CCLE Cell Line Gene CNV Profiles	1.0	1.42797
OVCAR-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.41754
NCI-H847	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.01924
SNU1033	CCLE Cell Line Gene CNV Profiles	1.0	3.2803
SNU410	CCLE Cell Line Gene CNV Profiles	-1.0	-1.63479
YMB-1-E	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.941331
HCC1395	CCLE Cell Line Gene CNV Profiles	-1.0	-1.75132
HDQP1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.5112
SUM 229PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.874907
SCC-25	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14485
HCC2885	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.77185
KPNRTBM1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.43374
CGTHW1	CCLE Cell Line Gene CNV Profiles	1.0	1.40964
PA-TU-8902	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.973475
nerve	GTEx Tissue Gene Expression Profiles	1.0	1.1892
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02438
G112	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.74865
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.67856
QGP-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.903029
DMS 79	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.824518
SUM 159PT	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.49627
IMR-32	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28527
SNU840	CCLE Cell Line Gene CNV Profiles	1.0	2.49357
HCC1263	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.902234
estradiol_homo sapiens_gpl570_gds3283	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
MDA-MB-468	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.45721
NCI-H446	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.958984
COV318	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14963
537 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.21595
NCI-H1299	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.97366
PK-45P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05867
Idiopathic fibrosing alveolitis_Lung Tissue_GSE21369	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	3.40599
OVCA 432	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.45599
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08523
JHH2	CCLE Cell Line Gene CNV Profiles	1.0	2.00228
VA-ES-BJ	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.97366
HCC-33	Sanger Dependency Map Cancer Cell Line Proteomics	-1.0	-2.28115
SW1271	CCLE Cell Line Gene CNV Profiles	-1.0	-2.20312
COLO668	CCLE Cell Line Gene CNV Profiles	1.0	1.92188
MFE280	CCLE Cell Line Gene CNV Profiles	1.0	1.49708
JHH-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.37005
JEKO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06598
SW1271	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.97366
NCI-H1355	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18815
SNU-601	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.973475
HCC827	CCLE Cell Line Gene CNV Profiles	1.0	1.3861
SUPHD1	CCLE Cell Line Gene CNV Profiles	1.0	1.47362
A704	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.97366
MKN-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08523
EPLC272H	CCLE Cell Line Gene CNV Profiles	1.0	1.45549
HT-55	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14485
A704	CCLE Cell Line Gene CNV Profiles	-1.0	-2.59447
HEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.76292
VMRC-LCD	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07496
SKRC31	CCLE Cell Line Gene CNV Profiles	-1.0	-2.09288
NCI-H2009	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07496
SK-OV-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.37742
C3A	CCLE Cell Line Gene CNV Profiles	-1.0	-1.73986
CAMA-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14485
SNU-182	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.902234
NCIH2126	CCLE Cell Line Gene CNV Profiles	1.0	1.35765
MEG01	CCLE Cell Line Gene CNV Profiles	1.0	1.8343
KMS-12-BM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06532
SF126	CCLE Cell Line Gene CNV Profiles	-1.0	-1.56819
8MGBA	CCLE Cell Line Gene CNV Profiles	1.0	1.57847
KMS-28BM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.18613
NCI-H2461	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.852271
HCC2279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.07322
FADU	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21979
HCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.892575
YMB-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.941331
NCI-H520	Sanger Dependency Map Cancer Cell Line Proteomics	-1.0	-2.52759
PA-TU-8988S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.902234
G121	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.983067
SUM 1315M02	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.68569
NCIH1930	CCLE Cell Line Gene CNV Profiles	-1.0	-1.8646
HCaRG_OE_GDS1411_72_human_HEK293 embryonal kidney cell line	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
CACO-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55616
Enterovirus 71_4Hour_None_GSE15323	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	2.38967
KMS-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.862955
NTERA-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.7075
KMH-2	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.97366
NCI-H650	Sanger Dependency Map Cancer Cell Line Proteomics	-1.0	-2.28121
CHP212	CCLE Cell Line Gene CNV Profiles	-1.0	-1.49137
FXR	MotifMap Predicted Transcription Factor Targets	1.0	null
BICR 31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29618
PL45	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.983067
STAT6	MotifMap Predicted Transcription Factor Targets	1.0	null
KPNYN	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44117
REC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10194
COV318	CCLE Cell Line Gene CNV Profiles	1.0	1.43231
SK-MEL-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.31631
CAPAN-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.902234