association dataset threshold value standardized value PCBP1 Pathway Commons Protein-Protein Interactions 1.0 null MAP4 Pathway Commons Protein-Protein Interactions 1.0 null G-361 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.16101 GLRX3 Pathway Commons Protein-Protein Interactions 1.0 null RAD21 ENCODE Transcription Factor Targets 1.0 null CTCF_BE2C_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MRPS2 Pathway Commons Protein-Protein Interactions 1.0 null uterine cervix TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null FLI1_megakaryocyte_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null BL1034 (ADNP) NURSA Protein Complexes 1.0 null intracellular non-membrane-bounded organelle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 GTEX-N7MS-0011-R6a-SM-2HMJ4 GTEx Tissue Sample Gene Expression Profiles 1.0 1.54654 GTEX-WL46-2826-SM-3LK81 GTEx Tissue Sample Gene Expression Profiles 1.0 1.2695 TPR Pathway Commons Protein-Protein Interactions 1.0 null JJN3 CCLE Cell Line Gene Expression Profiles 1.0 2.13865 GTEX-OHPM-1026-SM-3LK74 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.961327 IRF1 ENCODE Transcription Factor Targets 1.0 null snrna binding GO Molecular Function Annotations 2015 1.0 null POLR2A_GM18526_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_BJ_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H1FX Pathway Commons Protein-Protein Interactions 1.0 null GTEX-R55C-0005-SM-3GAE9 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.981 Prostate adenocarcinoma_PRAD_TCGA-FC-A6HD-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SIX5_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HMV-II GDSC Cell Line Gene Expression Profiles 1.0 1.76798 adult retina HPM Cell Type and Tissue Protein Expression Profiles 1.0 1.14787 JHH7 CCLE Cell Line Gene CNV Profiles 1.0 1.38229 SUM159PT Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.803369 PSMG2 Pathway Commons Protein-Protein Interactions 1.0 null PAX5_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null REST_PFSK-1_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCC1954 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.0152 CREM-20920259-GC1-SPG-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null GTEX-TMZS-0001-SM-3P61Q GTEx Tissue Sample Gene Expression Profiles 1.0 0.883581 Tuberomammillary nucleus, ventral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.04869 GTEX-PLZ6-0726-SM-3P619 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.922769 NACA Pathway Commons Protein-Protein Interactions 1.0 null SK-MEL-2 GDSC Cell Line Gene Expression Profiles 1.0 2.13522 H3K4me3_HeLa-S3_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null r7 part of the dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.43794 Liver hepatocellular carcinoma_LIHC_TCGA-G3-A25X-01A-11R-A16W-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null dorsal lateral geniculate nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.07503 posteroventral (inferior) parietal cortex_11 yrs_F_12289 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.22412 WIDR Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.11422 H3K4me3_Adipose Derived Mesenchymal Stem Cell Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null blood TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 DB Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.997411 NCI-H2373 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.6862 GTEX-R55D-1426-SM-48FEN GTEx Tissue Sample Gene Expression Profiles -1.0 -1.13512 Perturb_15709_KD_Ctcf_SRP173291 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -13.4078 kidney BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -1.07649 H3K4me3_fibroblast of lung_hg19_7 ENCODE Histone Modification Site Profiles 1.0 null TAL1 ENCODE Transcription Factor Targets 1.0 null H4K20me1_myotube_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null MAZ_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null VPS35 Pathway Commons Protein-Protein Interactions 1.0 null ARID3A_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MCF7 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -0.799004 UBE2M Pathway Commons Protein-Protein Interactions 1.0 null RPSA Pathway Commons Protein-Protein Interactions 1.0 null Pheochromocytoma and Paraganglioma_PCPG_TCGA-SR-A6MS-01A-11R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-RM2N-1826-SM-2TF5B GTEx Tissue Sample Gene Expression Profiles -1.0 -0.969804 H3K4me3_fibroblast of the aortic adventitia_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null SNU-182 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.26142 HIST1H2BJ Pathway Commons Protein-Protein Interactions 1.0 null Lung adenocarcinoma_LUAD_TCGA-50-6594-01A-11R-1755-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ventrolateral prefrontal cortex_12 pcw_F_12835 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.34746 cellular component biogenesis GO Biological Process Annotations 2015 1.0 null GTEX-RVPV-0011-R11A-SM-2TF6F GTEx Tissue Sample Gene Expression Profiles 1.0 1.26133 FDFT1 Pathway Commons Protein-Protein Interactions 1.0 null mantle zone of JcPD Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.2017 VZ in caudal hippocampal proper Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -2.30105 PHF5A Pathway Commons Protein-Protein Interactions 1.0 null YY1_SK-N-SH_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-P4PQ-1026-SM-3NMCN GTEx Tissue Sample Gene Expression Profiles -1.0 -1.1134 RPL18 Pathway Commons Protein-Protein Interactions 1.0 null NCI-H522 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.01609 STIP1 Pathway Commons Protein-Protein Interactions 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5456-11A-02R-1503-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cellular_component GO Cellular Component Annotations 2015 1.0 null RBM12 Pathway Commons Protein-Protein Interactions 1.0 null epithelioma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.051837 intermediate stratum of r10Ve Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.21175 TCF7L2_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null LGALS1 Pathway Commons Protein-Protein Interactions 1.0 null PRRC2C Pathway Commons Protein-Protein Interactions 1.0 null KPNA1 Pathway Commons Protein-Protein Interactions 1.0 null MDA-MB-330 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.840999 SNRPD2 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_C2C12_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-VUSH-0004-SM-3P61T GTEx Tissue Sample Gene Expression Profiles 1.0 1.31123 FADU GDSC Cell Line Gene Expression Profiles 1.0 1.71517 bmi1_17452456_medulloblastoma_lof_human_gpl570_gds2724 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.469511 Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4698-01A-01R-1503-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TBC1D15 Pathway Commons Protein-Protein Interactions 1.0 null suboptic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.0166 imatinib_homo sapiens_gpl96_gds3043 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null SG in temporal polar cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.36003 PSMD12 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-T5JC-0226-SM-32PMA GTEx Tissue Sample Gene Expression Profiles -1.0 -0.986669 BL6869 (CEP192) NURSA Protein Complexes 1.0 null BROX Pathway Commons Protein-Protein Interactions 1.0 null MRPS31 Pathway Commons Protein-Protein Interactions 1.0 null choroid plexus of the lateral ventricle Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.42809 GTEX-OIZI-1326-SM-3NB1B GTEx Tissue Sample Gene Expression Profiles -1.0 -0.858707 CAPAN-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.26142 JARID1A-20064375-MESC-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null cervical cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.103095 H3K4me3_A549_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null WM-266-4 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles 1.0 null TAF1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-R55D-0006-SM-3GIJS GTEx Tissue Sample Gene Expression Profiles -1.0 -0.85919 GTEX-NPJ8-1526-SM-2D7VU GTEx Tissue Sample Gene Expression Profiles 1.0 0.869452 Rotavirus infection of children_Peripheral blood mononuclear cell_GSE2729 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -1.76872 POLR2AphosphoS5_Panc1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4ac_H9 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null 20174566-TableS1 GeneSigDB Published Gene Signatures 1.0 null PYCRL Pathway Commons Protein-Protein Interactions 1.0 null HBG1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-NFK9-1626-SM-3LK5J GTEx Tissue Sample Gene Expression Profiles -1.0 -1.01829 gastrointestinal tract TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.0758 Death CTD Gene-Disease Associations 1.0 1.20262 ChIP_MYC_19079543 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null LB373-MEL-D GDSC Cell Line Gene Expression Profiles 1.0 1.7898 posteroventral (inferior) parietal cortex_8 yrs_M_12981 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 2.00989 GTEX-WRHU-1226-SM-4E3IJ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.2101 intracellular membrane-bounded organelle LOCATE Curated Protein Localization Annotations 1.0 null FKBP4 Pathway Commons Protein-Protein Interactions 1.0 null REST ChEA Transcription Factor Targets 1.0 null MYC_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null vincristine_rattus norvegicus_gpl1355_gse19290 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null YY1_GM12891_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SARS-CoV_84Hour_23935999_GSE47960 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.75118 HNRNPA2B1 Pathway Commons Protein-Protein Interactions 1.0 null hsa-miR-23b-3p MiRTarBase microRNA Targets 1.0 null HIST1H1A Pathway Commons Protein-Protein Interactions 1.0 null hsa-miR-95 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.07142 GTEX-RM2N-1926-SM-48FCU GTEx Tissue Sample Gene Expression Profiles -1.0 -1.15875 MYC ChEA Transcription Factor Targets 1.0 null GABPA_SK-N-SH_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null COR-L105 GDSC Cell Line Gene Expression Profiles -1.0 -1.47129 MAX_HCT116_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_foreskin fibroblast_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K14ac_H1 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null H3K9ac_Colon Smooth Muscle Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-44-7660-01A-11R-2066-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SETDB1_KO_GSE40296_7_mouse_brain (telencephalon) GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null CLIC5 Pathway Commons Protein-Protein Interactions 1.0 null primary motor cortex (area M1, area 4)_4 mos_M_12889 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.864941 MCM4 Pathway Commons Protein-Protein Interactions 1.0 null ANKHD1 Pathway Commons Protein-Protein Interactions 1.0 null ESET_KO_GDS4508_348_mouse_Dorsal telencephalon from E14.5 embryos GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null GNB1 Pathway Commons Protein-Protein Interactions 1.0 null shell of T-DMH Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.10848 ovary HPA Tissue Protein Expression Profiles -1.0 -0.935947 eGFP-HDAC8_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EIF3G Pathway Commons Protein-Protein Interactions 1.0 null Fastigial nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.01763 orbital frontal cortex_18 yrs_M_12984 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.84627 H3K4me1_Panc1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-QMR6-0011-R6A-SM-32PKP GTEx Tissue Sample Gene Expression Profiles 1.0 0.883527 RPS4X Pathway Commons Protein-Protein Interactions 1.0 null tip49 GeneRIF Biological Term Annotations 1.0 null intracellular non-membrane-bounded organelle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.051167 lateral ganglionic eminence_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.21535 Necrosis CTD Gene-Disease Associations 1.0 2.01663 MAX_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null JUND_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null HNRNPUL1 Pathway Commons Protein-Protein Interactions 1.0 null ALDH18A1 Pathway Commons Protein-Protein Interactions 1.0 null RERF-LC-OK Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.840999 GTEX-UTHO-0011-R5A-SM-3GIJD GTEx Tissue Sample Gene Expression Profiles 1.0 0.84077 periventricular stratum of AStr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.45244 H3K4me3_spleen_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_brain microvascular endothelial cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_SK-N-SH_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null primary somatosensory cortex (area S1, areas 3,1,2)_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.39587 RCOR1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RPS11 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-NPJ8-0011-R11A-SM-2YUMS GTEx Tissue Sample Gene Expression Profiles 1.0 0.883211 GABPA_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-RM2N-0326-SM-48FD8 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.08244 GTEX-N7MS-0011-R1a-SM-2HMJG GTEx Tissue Sample Gene Expression Profiles 1.0 1.26739 hsa-miR-542-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.7397 ELK4_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null DIAPH1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-RU72-0011-R8A-SM-2TF61 GTEx Tissue Sample Gene Expression Profiles 1.0 1.58742 GRANTA-519 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.82389 THBS1 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_CH12.LX_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_CH12.LX_mm9_4 ENCODE Histone Modification Site Profiles 1.0 null VZ in orbital frontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.10996 GSK3B_knockdown_209_GSE35351 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations 1.0 1.36773 SK-N-AS Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.17061 Skin Diseases CTD Gene-Disease Associations 1.0 1.04684 respiratory system TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.0758 Perturb_12961_KO_NMNAT1_SRP313669 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 NCBP1 Pathway Commons Protein-Protein Interactions 1.0 null snorna binding GO Molecular Function Annotations 2015 1.0 null OCI-LY-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.15991 AKAP1 Pathway Commons Protein-Protein Interactions 1.0 null nuclear lumen COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 GTEX-XQ8I-0006-SM-4BOQ5 GTEx Tissue Sample Gene Expression Profiles -1.0 -3.73239 Huntington's Disease_CNS - Brain - Striatum (MMHCC)_GSE5786 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 1.102 membrane-enclosed lumen COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 SW 1417 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.902426 POLR2A_IMR-90_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-N7MS-0011-R10A-SM-2HMJK GTEx Tissue Sample Gene Expression Profiles 1.0 2.02592 POLR2A_lung_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null JUN_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_skeletal muscle myoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null MYC ENCODE Transcription Factor Targets 1.0 null JAK1_druginhibition_166_GSE38335 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -0.896276 GLTSCR2 Pathway Commons Protein-Protein Interactions 1.0 null small nucleolar ribonucleoprotein complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.679849 TCF4-23295773-U87-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null EBF1_GM12878_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WL46-0011-R11A-SM-3MJFT GTEx Tissue Sample Gene Expression Profiles 1.0 2.00495 SW 403 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.902426 pseudohypoparathyroidism DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.941611 SIN3A_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27ac_H1 Derived Neuronal Progenitor Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GTEX-WVLH-0011-R10A-SM-3MJFM GTEx Tissue Sample Gene Expression Profiles 1.0 2.07852 MAX_HeLa-S3_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GM1600 BioGPS Cell Line Gene Expression Profiles -1.0 -1.07971 Skin Cutaneous Melanoma_SKCM_TCGA-QB-A6FS-06A-11R-A311-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hsa-miR-4763-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.7397 CMAH_KO_GDS4200_114_mouse_muscle GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null PI4KA Pathway Commons Protein-Protein Interactions 1.0 null periventricular stratum of r6Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.44889 parvicellular part of Lat Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.29608 TAF1_GM12891_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null TUBB Pathway Commons Protein-Protein Interactions 1.0 null GTEX-TMZS-0006-SM-3DB8G GTEx Tissue Sample Gene Expression Profiles -1.0 -0.918726 ACOT13 Pathway Commons Protein-Protein Interactions 1.0 null IGF2R Pathway Commons Protein-Protein Interactions 1.0 null CIRBP Pathway Commons Protein-Protein Interactions 1.0 null RPS5 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null periventricular stratum of r5Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.45774 digestive gland TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.0758 GTEX-XLM4-0004-SM-4AT5I GTEx Tissue Sample Gene Expression Profiles 1.0 0.924003 Sarcoma_SARC_TCGA-DX-AB2X-01A-11R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null salivary gland HPA Tissue Protein Expression Profiles 1.0 1.13616 BL406 (RFC3) NURSA Protein Complexes 1.0 null CCT6A Pathway Commons Protein-Protein Interactions 1.0 null HCFC1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RPLP0 Pathway Commons Protein-Protein Interactions 1.0 null MAP2K1_knockdown_105_GSE27869 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -1.63188 MRPS7 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-QVJO-0011-R6A-SM-2S1QN GTEx Tissue Sample Gene Expression Profiles 1.0 0.953297 POLR2A_Raji_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_brown adipose tissue_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null RPL36 Pathway Commons Protein-Protein Interactions 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-18-3411-01A-01R-0980-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null renal GAD High Level Gene-Disease Associations 1.0 0.293278 16872506-SuppTable1 GeneSigDB Published Gene Signatures 1.0 null GTEX-Q734-0426-SM-48TZX GTEx Tissue Sample Gene Expression Profiles -1.0 -1.26046 GTEX-VUSG-1426-SM-3GIJN GTEx Tissue Sample Gene Expression Profiles -1.0 -0.979893 PHGDH Pathway Commons Protein-Protein Interactions 1.0 null HNRNPH1 Pathway Commons Protein-Protein Interactions 1.0 null H3K56ac_H1 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GTEX-WZTO-2826-SM-3NM8P GTEx Tissue Sample Gene Expression Profiles 1.0 0.914426 SRSF9 Pathway Commons Protein-Protein Interactions 1.0 null Gamma-hydroxybutyric acidaemia_CNS - Brain - Hippocampus (MMHCC)_GSE2866 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -1.75173 GTEX-TKQ2-0426-SM-4DXUO GTEx Tissue Sample Gene Expression Profiles -1.0 -1.16864 HIP1 Pathway Commons Protein-Protein Interactions 1.0 null H3K36me3_ES-Bruce4_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null telmisartan_rattus norvegicus_gpl4135_gse29445 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null CTCF_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BCL3_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XAJ8-0006-SM-46MVM GTEx Tissue Sample Gene Expression Profiles -1.0 -1.4156 HCC1806 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.821434 hsa-miR-4525 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.880544 H3K27ac_GM12878_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_GM12875_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null YY1_HCT116_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K36me3_U2OS_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null STAT3_MCF 10A_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null 624 MEL Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.08031 PELP1 Pathway Commons Protein-Protein Interactions 1.0 null hsa-miR-3607-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.07142 H3K4me1_Stomach Mucosa Roadmap Epigenomics Histone Modification Site Profiles 1.0 null TAF1_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H1915 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.08486 CTCF_skeletal muscle myoblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null VZ in subcallosal region Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.973074 Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7JF-01A-11R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Perturb_4180_KO_Tsc1_SRP279018 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -1.58561 REST_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCC2279 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.05484 intracellular non-membrane-bounded organelle LOCATE Curated Protein Localization Annotations 1.0 null NAPG Pathway Commons Protein-Protein Interactions 1.0 null LMNB1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-WCDI-0008-SM-47JYE GTEx Tissue Sample Gene Expression Profiles 1.0 0.97216 GTEX-S3XE-0526-SM-4AD4G GTEx Tissue Sample Gene Expression Profiles -1.0 -0.933527 GTEX-QVJO-1325-SM-2S1QX GTEx Tissue Sample Gene Expression Profiles 1.0 1.0139 outer SZ in caudal midinferior temporal cortex (area TF) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.978678 organelle GO Cellular Component Annotations 2015 1.0 null r9 part of basointermediate reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.0399 H3K36me3_BJ_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null RPS23 Pathway Commons Protein-Protein Interactions 1.0 null SATB1 mouse (SATB1) NURSA Protein Complexes 1.0 null arcuate nucleus of the hypothalamus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.13398 PL-21 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.47402 POLR2AphosphoS5_HCT116_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Ulcerative Colitis_Peripheral blood mononuclear cell_GSE3365 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -1.60156 GTEX-X4EP-3226-SM-3P5YR GTEx Tissue Sample Gene Expression Profiles 1.0 1.15334 BL2753 (LCOR) NURSA Protein Complexes 1.0 null MXI1 ENCODE Transcription Factor Targets 1.0 null REC1 CCLE Cell Line Gene CNV Profiles -1.0 -1.81357 RAP2B Pathway Commons Protein-Protein Interactions 1.0 null RPS18 Pathway Commons Protein-Protein Interactions 1.0 null primary culture TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.303198 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A6JU-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-CC-A9FU-01A-11R-A37K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-U8T8-0005-SM-3DB8F GTEx Tissue Sample Gene Expression Profiles -1.0 -1.34879 snornas GeneRIF Biological Term Annotations 1.0 null H3K4me1_liver_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null CL11 CCLE Cell Line Gene CNV Profiles 1.0 1.5312 r6 part of paragigantocellular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.0124 HMGA1 Pathway Commons Protein-Protein Interactions 1.0 null SSBP1 Pathway Commons Protein-Protein Interactions 1.0 null Myocardial Ischemia CTD Gene-Disease Associations 1.0 1.05349 Bladder Urothelial Carcinoma_BLCA_TCGA-DK-A3IV-01A-22R-A21D-07 TCGA Signatures of Differentially Expressed Genes for Tumors -1.0 null Colorectaladenocarcinoma BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 0.867491 SCC-15 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.902426 KDM5A ChEA Transcription Factor Targets 1.0 null CREB1_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null tretinoin_homo sapiens_gpl6244_gds4180 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null HCC2911 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.70316 NFE2L2_Mutation_GDS4498_597_mouse_Skin GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null SNU489 CCLE Cell Line Gene Expression Profiles -1.0 -1.85378 FOXM1 ENCODE Transcription Factor Targets 1.0 null GTEX-S7SE-2526-SM-2XCDL GTEx Tissue Sample Gene Expression Profiles 1.0 0.896002 PANC0327 Achilles Cell Line Gene Essentiality Profiles -1.0 -1.07908 WHSC1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SIN3A_SK-N-SH_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-D3-A2JL-06A-11R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-O2-A52W-01A-11R-A26W-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null primary motor-sensory cortex (samples)_8 pcw_M_13058 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.31486 HT COSMIC Cell Line Gene Mutation Profiles 1.0 null GTEX-WVLH-0006-SM-3MJF7 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.35886 GPATCH4 Pathway Commons Protein-Protein Interactions 1.0 null r6 part of the cochlear column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.30498 TRIM28_U2OS_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27ac_CD4+ CD25int CD127+ Tmem Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null TRIM28_HEK293_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null internal male genital organ TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.23362 GTEX-S7SE-0011-R7A-SM-2XCDI GTEx Tissue Sample Gene Expression Profiles 1.0 1.49622 CAP1 Pathway Commons Protein-Protein Interactions 1.0 null NAA38 Pathway Commons Protein-Protein Interactions 1.0 null KDM4A ENCODE Transcription Factor Targets 1.0 null TCF12_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2949-03B-01T-0748-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null AM38 Achilles Cell Line Gene Essentiality Profiles 1.0 1.16284 core GeneRIF Biological Term Annotations 1.0 null CX-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.11527 ATF2_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null JHH-7 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.32856 GTEX-WHSE-0011-R3A-SM-3P5ZM GTEx Tissue Sample Gene Expression Profiles 1.0 1.27381 TRA2A Pathway Commons Protein-Protein Interactions 1.0 null SRPR Pathway Commons Protein-Protein Interactions 1.0 null parvocellular part of r8LRt Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.74276 MTDH Pathway Commons Protein-Protein Interactions 1.0 null BAG2 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-XLM4-0011-R3B-SM-4AT6E GTEx Tissue Sample Gene Expression Profiles 1.0 1.802 GTEX-QDVN-0006-SM-48U1R GTEx Tissue Sample Gene Expression Profiles -1.0 -1.88669 GAK GDSC Cell Line Gene Expression Profiles 1.0 1.64903 ATM_knockdown_113_GSE27869 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations 1.0 1.88523 GTEX-S7PM-0011-R5A-SM-3NM8G GTEx Tissue Sample Gene Expression Profiles -1.0 -0.87927 erg_19359602_huvec_lof_human_gpl570_gds3557 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.015732 RPS3A Pathway Commons Protein-Protein Interactions 1.0 null GTEX-QCQG-0006-SM-2S1OW GTEx Tissue Sample Gene Expression Profiles -1.0 -1.9116 ITGB1 Pathway Commons Protein-Protein Interactions 1.0 null PLEC Pathway Commons Protein-Protein Interactions 1.0 null Perturb_305_KD_Pabpn1_SRP318863 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 20.0 GTEX-WVLH-3026-SM-3MJG9 GTEx Tissue Sample Gene Expression Profiles 1.0 1.66395 H3K4me3_cardiac mesoderm_hg19_5 ENCODE Histone Modification Site Profiles 1.0 null organelle part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.18516 RPL18A Pathway Commons Protein-Protein Interactions 1.0 null gene expression GO Biological Process Annotations 2015 1.0 null GTEX-XOT4-1126-SM-4B66E GTEx Tissue Sample Gene Expression Profiles 1.0 0.892608 POLR2A_myocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null supramammillary nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.0793 H3K27ac_cerebellum_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null CREB1_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TBL1XR1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTF2I Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_GM06990_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null SRP9 Pathway Commons Protein-Protein Interactions 1.0 null SRP14 Pathway Commons Protein-Protein Interactions 1.0 null MAFK_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null VZ in thalamic region Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -2.15761 H3K4me2_skeletal muscle myoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-CF-A47Y-01A-11R-A23W-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_GM19240_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BL7477 (CHTF18) NURSA Protein Complexes 1.0 null superficial stratum of r6BI Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.25965 LS 174T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.933168 RBBP5_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MICU1 Pathway Commons Protein-Protein Interactions 1.0 null doxorubicin_homo sapiens_gpl6947_gse25741 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null RALY Pathway Commons Protein-Protein Interactions 1.0 null liver GTEx Tissue Gene Expression Profiles -1.0 -1.63823 RANBP1 Pathway Commons Protein-Protein Interactions 1.0 null RUVBL2 Pathway Commons Protein-Protein Interactions 1.0 null ZMIZ1 ENCODE Transcription Factor Targets 1.0 null MX-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.848355 MXI1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K36me3_GM06990_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_HeLa-S3_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_embryonic fibroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Lung Neoplasms CTD Gene-Disease Associations 1.0 1.12014 HS578T Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.847788 H3K4me2_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_epithelial cell of esophagus_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null RAB10 Pathway Commons Protein-Protein Interactions 1.0 null SKMEL2 BioGPS Cell Line Gene Expression Profiles 1.0 2.41553 GMS10 CCLE Cell Line Gene Expression Profiles -1.0 -1.52625 PHF8_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ETS1 ENCODE Transcription Factor Targets 1.0 null H2AFZ_astrocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null primary auditory cortex (core)_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.880904 skeletal muscle HPA Tissue Protein Expression Profiles -1.0 -0.935947 NOP2 Pathway Commons Protein-Protein Interactions 1.0 null metal metabolism disorder DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.403438 YY1_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EPB41 Pathway Commons Protein-Protein Interactions 1.0 null HBZ Pathway Commons Protein-Protein Interactions 1.0 null NCI-H596 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.901451 AP2B1 Pathway Commons Protein-Protein Interactions 1.0 null HCC1954 Achilles Cell Line Gene Essentiality Profiles -1.0 -1.53179 IRF1_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCIH2228 CCLE Cell Line Gene CNV Profiles -1.0 -1.66152 EXOSC1 Pathway Commons Protein-Protein Interactions 1.0 null exchange GeneRIF Biological Term Annotations 1.0 null IPO5 Pathway Commons Protein-Protein Interactions 1.0 null GRWD1 Pathway Commons Protein-Protein Interactions 1.0 null periventricular stratum of r6BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.2093 disease of anatomical entity DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.039623 WRNIP1 ENCODE Transcription Factor Targets 1.0 null HCMV_24Hour_20173022_GSE17948 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.72481 SNAP29 Pathway Commons Protein-Protein Interactions 1.0 null p1 part of the substantia nigra reticulata Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.05547 MAPK14_knockdown_101_GSE27869 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -1.76117 macromolecular complex GO Cellular Component Annotations 2015 1.0 null mantle zone of r6Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.30498 CAV3_Deficiency_GDS3552_558_mouse_Hearts GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null Sarcoma_SARC_TCGA-DX-A8BZ-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SPI1_HL-60_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TTC27 Pathway Commons Protein-Protein Interactions 1.0 null H3K27ac_B cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_NB4_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null EEF1D Pathway Commons Protein-Protein Interactions 1.0 null HCC89 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.85968 GTEX-X585-0011-R10A-SM-46MUY GTEx Tissue Sample Gene Expression Profiles 1.0 2.17353 GTEX-NL3H-0006-SM-2I3FW GTEx Tissue Sample Gene Expression Profiles -1.0 -1.45198 GTEX-T6MN-0011-R7A-SM-32QP5 GTEx Tissue Sample Gene Expression Profiles 1.0 0.865597 NCI-H2198 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.00274 animal TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.23362 H3K27ac_CD4+ CD25- CD45RO+ Memory Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null COLO783 Achilles Cell Line Gene Essentiality Profiles 1.0 2.29318 Bladder Urothelial Carcinoma_BLCA_TCGA-CF-A3MI-01A-11R-A20F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null LLPH Pathway Commons Protein-Protein Interactions 1.0 null CHD7_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-CC-A5UC-01A-11R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null reticulotegmental nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.923149 TOP2A Pathway Commons Protein-Protein Interactions 1.0 null episupraoptic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 3.36916 retroparafascicular area of thalamus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.77448 GTEX-U3ZH-0005-SM-3DB72 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.00579 ATP5B Pathway Commons Protein-Protein Interactions 1.0 null GTEX-N7MS-0011-R2a-SM-2HML6 GTEx Tissue Sample Gene Expression Profiles 1.0 1.79465 intermediate (interpositus) cerebellar nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.077 POLR2A_GM19099_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TEAD4 ENCODE Transcription Factor Targets 1.0 null GTEX-WHSE-0011-R2A-SM-3P5ZL GTEx Tissue Sample Gene Expression Profiles 1.0 1.45386 superficial stratum of r11Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.37638 POLR2A_GM12891_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XUZC-2126-SM-4BRW8 GTEx Tissue Sample Gene Expression Profiles 1.0 1.19317 H3K4me3_Brain Anterior Caudate Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GTEX-T6MN-0011-R11A-SM-32QOX GTEx Tissue Sample Gene Expression Profiles 1.0 1.0422 MAX_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-T5JW-0005-SM-3GADE GTEx Tissue Sample Gene Expression Profiles -1.0 -1.54484 H3K4me3_heart_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-PX3G-0006-SM-33HBQ GTEx Tissue Sample Gene Expression Profiles -1.0 -0.849748 HT Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles 1.0 null H3K4me3_endothelial cell of umbilical vein_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null fetus TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 USP7 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_BE2C_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-RWS6-2326-SM-2XCB4 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.912858 E2F6_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HADHB Pathway Commons Protein-Protein Interactions 1.0 null RPS10 Pathway Commons Protein-Protein Interactions 1.0 null H3K9ac_NT2-D1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null CEBPD ENCODE Transcription Factor Targets 1.0 null COLO 792 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.43364 H3K27ac_brain_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null r4 part of medial paralemniscal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.33078 MRPL43 Pathway Commons Protein-Protein Interactions 1.0 null CTCF_K562_hg19_7 ENCODE Transcription Factor Binding Site Profiles 1.0 null CCT5 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-X4XY-0006-SM-46MV2 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.21241 UBE2G2 Hub Proteins Protein-Protein Interactions 1.0 null primary somatosensory cortex (area S1, areas 3,1,2)_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.929974 POLR2A_A549_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null SK-MEL-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.858807 SLIRP Pathway Commons Protein-Protein Interactions 1.0 null PDCD11 Pathway Commons Protein-Protein Interactions 1.0 null Fibrosis CTD Gene-Disease Associations 1.0 1.04904 H3K4me3_fibroblast of skin of abdomen_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null EP300_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XV7Q-0226-SM-4BRVL GTEx Tissue Sample Gene Expression Profiles 1.0 1.24587 SNRPE Pathway Commons Protein-Protein Interactions 1.0 null CCDC86 Pathway Commons Protein-Protein Interactions 1.0 null PHB Pathway Commons Protein-Protein Interactions 1.0 null Anteroventral periventricular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.23845 Heart Diseases CTD Gene-Disease Associations 1.0 1.43482 COPE Pathway Commons Protein-Protein Interactions 1.0 null PTPN11 Pathway Commons Protein-Protein Interactions 1.0 null Prostate adenocarcinoma_PRAD_TCGA-G9-6379-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null testis_7e HPA Tissue Sample Gene Expression Profiles 1.0 1.20065 H3K4me3_foreskin fibroblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_cerebellum_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null EP300_H1-hESC_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_mammary epithelial cell_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null FLOT2 Pathway Commons Protein-Protein Interactions 1.0 null embryo TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.053106 Heart BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 1.99338 H3K4me1_G1E-ER4_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XPT6-0006-SM-4B66Q GTEx Tissue Sample Gene Expression Profiles -1.0 -1.74118 H3K4me3_CD34 Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null hippocampus (hippocampal formation)_11 yrs_F_12289 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.95793 NFIC_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null dense fibrillar component COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.811193 BL5418 (DLG5) NURSA Protein Complexes 1.0 null HCC1011 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.902426 brownfat BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -1.05751 fallopiantube_8e HPA Tissue Sample Gene Expression Profiles 1.0 0.828153 501A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.86752 H2AFZ_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-POYW-0526-SM-2XCEY GTEx Tissue Sample Gene Expression Profiles 1.0 0.986223 GTEX-U3ZG-0006-SM-47JWX GTEx Tissue Sample Gene Expression Profiles -1.0 -1.75712 Lung squamous cell carcinoma_LUSC_TCGA-77-7139-01A-11R-2045-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-ED-A7PZ-01A-11R-A33R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null imatinib_homo sapiens_gpl571_gds3518 GEO Signatures of Differentially Expressed Genes for Small Molecules -1.0 null POLR2A_GM12891_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null metabolic process GO Biological Process Annotations 2015 1.0 null trastuzumab_homo sapiens_gpl570_gse15043 GEO Signatures of Differentially Expressed Genes for Small Molecules -1.0 null UBE2NL Pathway Commons Protein-Protein Interactions 1.0 null mammillary body, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.67063 TUBB6 Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-W5WG-0006-SM-3GIJT GTEx Tissue Sample Gene Expression Profiles -1.0 -1.38241 CKAP4 Pathway Commons Protein-Protein Interactions 1.0 null Type 2 diabetes mellitus_Endocrine Pancreas - Islet Cell of Langerhans - Beta Cell (MMHCC)_GSE6428 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -1.49295 SG in primary auditory cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.907521 Skin Cutaneous Melanoma_SKCM_TCGA-EB-A5UM-01A-11R-A311-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-WHSE-0011-R1A-SM-3P5ZK GTEx Tissue Sample Gene Expression Profiles 1.0 1.1793 ATP5A1 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_A549_hg19_4 ENCODE Histone Modification Site Profiles 1.0 null H3K79me2_myocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_G1E_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-WHPG-0006-SM-3NMBV GTEx Tissue Sample Gene Expression Profiles -1.0 -1.38315 GTEX-WHSE-0006-SM-3NMBW GTEx Tissue Sample Gene Expression Profiles -1.0 -1.04141 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EK-A2RK-01A-11R-A18M-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null VZ in subgenual cingulate neocortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.862956 COLO 679 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.9535 NDUFA5 Pathway Commons Protein-Protein Interactions 1.0 null CREB1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null YY1_GM12892_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null KIAA0368 Pathway Commons Protein-Protein Interactions 1.0 null primary somatosensory cortex (area S1, areas 3,1,2)_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.956132 PSMD3 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-T6MN-0011-R1A-SM-32QOY GTEx Tissue Sample Gene Expression Profiles 1.0 1.15479 RKO Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.866435 POLR2A_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTF3C2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-RNOR-2226-SM-2TF5O GTEx Tissue Sample Gene Expression Profiles 1.0 0.958395 RUNX3_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null JHH-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.874648 BAG6 Pathway Commons Protein-Protein Interactions 1.0 null STX4 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_fibroblast of pulmonary artery_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null 50S ribosomal protein L30e-like InterPro Predicted Protein Domain Annotations 1.0 null SUZ12 ENCODE Transcription Factor Targets 1.0 null GTEX-N7MS-2625-SM-3LK77 GTEx Tissue Sample Gene Expression Profiles 1.0 1.40186 Perturb_17028_KO_EBF1_SRP318469 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 1.44895 H3K4me3_skeletal muscle cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null r7 part of rostral ventromedial reticular area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.25659 CTCF_fibroblast of skin of abdomen_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CS-2126S () NURSA Protein Complexes 1.0 null CORO1B Pathway Commons Protein-Protein Interactions 1.0 null A-CA-04-2009(H1N1)_0Hour_23935999_GSE47962 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 2.21624 LGLL - Large granular lymphocytic leukemia_Peripheral blood mononuclear cell_GSE10631 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -1.56717 parvocellular part of the r9LRt Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.35724 TTLL12 Pathway Commons Protein-Protein Interactions 1.0 null nucleobase-containing compound metabolic process GO Biological Process Annotations 2015 1.0 null BL9178 (GNB2L1) NURSA Protein Complexes 1.0 null H2AFZ_B cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MXI1_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null solitary nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.62756 GATA1_MEL cell line_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-BB-A5HY-01A-11R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null putamen, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.13897 Acute Myeloid Leukemia_LAML_TCGA-AB-2943-03A-01T-0740-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null FOXC1 JASPAR Predicted Transcription Factor Targets 1.0 null cellular_component COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.047394 KANK2 Pathway Commons Protein-Protein Interactions 1.0 null primary visual cortex (striate cortex, area V1/17)_11 yrs_F_12289 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.16138 primary motor cortex (area M1, area 4)_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.844631 Mdr2_KO_GDS1990_286_mouse_Livers of 12 month old GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null ventricular (matrix) zone of pons Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.37591 RPL14 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_ES-E14_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-Q2AG-0011-R8A-SM-2HMK5 GTEx Tissue Sample Gene Expression Profiles 1.0 1.1321 ets_00000000_2008_ovarian_cancer_cells_gof_human_gpl6244_gse21129 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.079076 EP300_osteoblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null small nucleolar ribonucleoprotein complex GO Cellular Component Annotations 2015 1.0 null NRF1 ENCODE Transcription Factor Targets 1.0 null Lung adenocarcinoma_LUAD_TCGA-78-7153-01A-11R-2039-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TBP_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ribonucleoprotein complex COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 H3K4me3_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_HepG2_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null Prenatal Injuries CTD Gene-Disease Associations 1.0 1.33494 H3K4me3_erythroblast_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-NPJ8-0011-R10A-SM-2YUMO GTEx Tissue Sample Gene Expression Profiles 1.0 1.22882 RSL1D1 Pathway Commons Protein-Protein Interactions 1.0 null ZFP91 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_brain_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null RELA ENCODE Transcription Factor Targets 1.0 null valproic acid_homo sapiens_gpl96_gds1050 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null periaqueductal gray substance, dorsolateral portion Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.47023 sirolimus_homo sapiens_gpl96_gds2494 GEO Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-O5YW-0006-SM-3LK6E GTEx Tissue Sample Gene Expression Profiles -1.0 -1.07305 PHF8 ENCODE Transcription Factor Targets 1.0 null Testis BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 1.29859 H3K4me3_mammary epithelial cell_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null GTEX-WZTO-3026-SM-3NMA2 GTEx Tissue Sample Gene Expression Profiles 1.0 0.824109 reproductive system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null ZKSCAN1 ENCODE Transcription Factor Targets 1.0 null USF2_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MOLP-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.76757 TAF1_PFSK-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null roof plate of p2 (epithalamic roofplate) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.91782 SEPT9 Pathway Commons Protein-Protein Interactions 1.0 null TBP_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-P4PP-0005-SM-2HMKX GTEx Tissue Sample Gene Expression Profiles -1.0 -2.8801 decitabine_homo sapiens_gpl570_gse30985 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null rt4 HPA Cell Line Gene Expression Profiles -1.0 -1.30797 H3K4me3_fibroblast of gingiva_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null NUP210 Pathway Commons Protein-Protein Interactions 1.0 null HCFC1_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-POMQ-0006-SM-33HBY GTEx Tissue Sample Gene Expression Profiles -1.0 -1.65296 ventral tuberomammillary nucleus, intermediate part (histaminergic) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.01985 ARPC4 Pathway Commons Protein-Protein Interactions 1.0 null OE19 CCLE Cell Line Gene CNV Profiles 1.0 2.0252 SK-MEL-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 3.24385 Bladder Urothelial Carcinoma_BLCA_TCGA-CF-A8HY-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null u3 snorna binding GO Molecular Function Annotations 2015 1.0 null PDHB Pathway Commons Protein-Protein Interactions 1.0 null RPA2 Pathway Commons Protein-Protein Interactions 1.0 null PSMA7 Pathway Commons Protein-Protein Interactions 1.0 null CTCF_kidney epithelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null tardbp_19910924_hek293e_lof_human_gpl570_gds3730 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.44955 PML_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CSNK2B Pathway Commons Protein-Protein Interactions 1.0 null dorsolateral prefrontal cortex_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.21192 r1 part of vestibular nucleus Y Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.14259 H3K4me3_HepG2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-38-4625-01A-01R-1206-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cerebellar nuclei of CbH Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.06269 GTEX-XLM4-0011-R7A-SM-4AT5L GTEx Tissue Sample Gene Expression Profiles 1.0 0.867391 SNRPN Pathway Commons Protein-Protein Interactions 1.0 null GTEX-QESD-2026-SM-447BI GTEx Tissue Sample Gene Expression Profiles -1.0 -1.00091 FGFBP1 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_epithelial cell of esophagus_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null FOXM1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H1666 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.11527 CTCF_foreskin fibroblast_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_fibroblast of lung_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null ventral part of THyB Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.38697 H3K9ac_astrocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Lateral reticular nucleus, parvicellular part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.09151 TCF12_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-52-7810-01A-11R-2125-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null r6 part of nucleus prepositus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.2077 mRNA processing(Mus musculus) WikiPathways Pathways 2014 1.0 null FUS Pathway Commons Protein-Protein Interactions 1.0 null heart muscle HPA Tissue Gene Expression Profiles 1.0 0.842267 CA3 field, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.07166 TIA1 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_limb_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A6JM-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MYC_MCF 10A_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_brown adipose tissue_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null EXOSC6 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-R55G-0006-SM-2TC6O GTEx Tissue Sample Gene Expression Profiles -1.0 -2.72813 rh30 HPA Cell Line Gene Expression Profiles -1.0 -1.18466 TBP ENCODE Transcription Factor Targets 1.0 null lateral mammillary nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.38892 CEBPB_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-SN8G-0008-SM-4DM4X GTEx Tissue Sample Gene Expression Profiles 1.0 1.08592 relaxation GeneRIF Biological Term Annotations 1.0 null H3K4me1_A549_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null LS-1034 GDSC Cell Line Gene Expression Profiles -1.0 -2.08106 r2 part of vestibular nucleus Y Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.68461 Ventromedial hypothalamic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.05547 Perturb_1201_KO_Sp1_SRP302435 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 20.0 adrenal_4a HPA Tissue Sample Gene Expression Profiles 1.0 1.05295 CTCF_fibroblast of skin of abdomen_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-BA-7269-01A-11R-2016-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null posteroventral (inferior) parietal cortex_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.36434 adenocarcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.052897 KLE Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.833661 GTEX-PVOW-2526-SM-2XCF7 GTEx Tissue Sample Gene Expression Profiles 1.0 1.22358 nervous system TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.53602 reproductive system TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.53602 YARS Pathway Commons Protein-Protein Interactions 1.0 null Declive (VI), granular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.15211 E2F4 ENCODE Transcription Factor Targets 1.0 null Atherosclerosis CTD Gene-Disease Associations 1.0 1.04201 MEPCE Pathway Commons Protein-Protein Interactions 1.0 null SND1 Pathway Commons Protein-Protein Interactions 1.0 null cellular nitrogen compound metabolic process GO Biological Process Annotations 2015 1.0 null POLR2A_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PPP1CA Pathway Commons Protein-Protein Interactions 1.0 null Lung adenocarcinoma_LUAD_TCGA-64-1676-01A-01R-0946-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CAOV-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.948501 GTEX-R55E-2726-SM-48FCX GTEx Tissue Sample Gene Expression Profiles 1.0 0.904526 anterior part of Int Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.00744 H3K27ac_Brain Inferior Temporal Lobe Roadmap Epigenomics Histone Modification Site Profiles 1.0 null BL235 (CHEK1) NURSA Protein Complexes 1.0 null MYO18A Pathway Commons Protein-Protein Interactions 1.0 null GTEX-XUZC-0005-SM-4BOQ8 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.52444 GTEX-SE5C-0426-SM-4BRUI GTEx Tissue Sample Gene Expression Profiles 1.0 0.824229 GTEX-NPJ7-0011-R8a-SM-2I3G2 GTEx Tissue Sample Gene Expression Profiles 1.0 2.56245 r5 (gustatory) part of solitary complex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.45829 MTFMT Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RCOR1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null r7 part of nucleus prepositus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.42913 PK59 CCLE Cell Line Gene Expression Profiles -1.0 -2.73772 Liver Neoplasms CTD Gene-Disease Associations 1.0 1.15189 YY1_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null ATAD3A Pathway Commons Protein-Protein Interactions 1.0 null organic cyclic compound metabolic process GO Biological Process Annotations 2015 1.0 null MARS Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_brain microvascular endothelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null NR2C2 ENCODE Transcription Factor Targets 1.0 null GTEX-WL46-0011-R10A-SM-3MJFQ GTEx Tissue Sample Gene Expression Profiles 1.0 1.75365 PNP Pathway Commons Protein-Protein Interactions 1.0 null MAX_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_G1E_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null r11 part of spinal trigeminal nucleus, caudal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.37742 MYOG ENCODE Transcription Factor Targets 1.0 null hematopoietic system TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 CPSF7 Pathway Commons Protein-Protein Interactions 1.0 null TRIM28 ChEA Transcription Factor Targets 1.0 null r10 part of the inferior olive Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.3932 EED Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_LNCaP clone FGC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null MEPCE Hub Proteins Protein-Protein Interactions 1.0 null organelle LOCATE Curated Protein Localization Annotations 1.0 null NDUFA9 Pathway Commons Protein-Protein Interactions 1.0 null ITGA5 Pathway Commons Protein-Protein Interactions 1.0 null inferior olivary complex, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.929555 RPL38 Pathway Commons Protein-Protein Interactions 1.0 null G121 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.979552 E2F4_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SPI1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_fibroblast of dermis_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me2_A549_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null S100A7 Pathway Commons Protein-Protein Interactions 1.0 null H3K27ac_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-VUSH-0005-SM-3NB2H GTEx Tissue Sample Gene Expression Profiles -1.0 -1.09794 GTEX-RWS6-1126-SM-47JXC GTEx Tissue Sample Gene Expression Profiles -1.0 -1.05053 r3 roof plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.14624 Kidney renal papillary cell carcinoma_KIRP_TCGA-G7-A8LB-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null eye TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 COPD - Chronic obstructive pulmonary disease_Bronchial epithelium_GSE3320 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 2.04485 CVB3_30min-Infection_None_GSE697 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.8018 ARID3A ENCODE Transcription Factor Targets 1.0 null RTCA Pathway Commons Protein-Protein Interactions 1.0 null PRKCDBP Pathway Commons Protein-Protein Interactions 1.0 null DHX35 Pathway Commons Protein-Protein Interactions 1.0 null superficial stratum of TSPaA Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.45345 inner SZ in primary visual cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.869791 CP in caudal subicular cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.02713 Memory Disorders CTD Gene-Disease Associations 1.0 1.2279 posterior part of Int Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.224 RPL23A Pathway Commons Protein-Protein Interactions 1.0 null MAX_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null EFM-192B Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.985025 amygdaloid complex_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.50429 estradiol_homo sapiens_gpl570_gse16683 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Methionine CTD Gene-Chemical Interactions 1.0 null XRN2 Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_testis_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HIST1H2AA Pathway Commons Protein-Protein Interactions 1.0 null Cortical amygdalar area, posterior part, medial zone, layer 2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.05821 HMGN3 ENCODE Transcription Factor Targets 1.0 null KELLY Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.40086 GTEX-S95S-0005-SM-2XCEC GTEx Tissue Sample Gene Expression Profiles -1.0 -1.9423 SAR1B Pathway Commons Protein-Protein Interactions 1.0 null KASUMI6 CCLE Cell Line Gene Expression Profiles 1.0 1.38054 MRPS9 Pathway Commons Protein-Protein Interactions 1.0 null FLI1-21571218-MEGAKARYOCYTES-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null ventral tegmental area Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.00564 SW1573 GDSC Cell Line Gene Expression Profiles -1.0 -1.50838 SEC22B Pathway Commons Protein-Protein Interactions 1.0 null NCIH2405 CCLE Cell Line Gene Expression Profiles -1.0 -1.72611 organelle part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 GTEX-S7PM-0006-SM-3NM8C GTEx Tissue Sample Gene Expression Profiles -1.0 -1.14799 LARP7 Pathway Commons Protein-Protein Interactions 1.0 null body of caudate nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.967196 myotube TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.529113 Hypertrophy CTD Gene-Disease Associations 1.0 1.4933 EGR1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-T2IS-2926-SM-32QPO GTEx Tissue Sample Gene Expression Profiles 1.0 1.099 MBD4 ENCODE Transcription Factor Targets 1.0 null free GeneRIF Biological Term Annotations 1.0 null CACYBP Pathway Commons Protein-Protein Interactions 1.0 null Fatty Liver, Alcoholic CTD Gene-Disease Associations 1.0 1.17202 H3K27ac_heart_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-AK-3447-01A-01R-1766-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null box c/d snornp complex COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 chlorambucil_homo sapiens_gpl570_gds2970 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-UJMC-0005-SM-3GACU GTEx Tissue Sample Gene Expression Profiles -1.0 -1.52426 ventrolateral prefrontal cortex_10 mos_M_12977 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.05007 lateral (dentate) cerebellar nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.00637 CTCF_MCF-7_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null frontal pole, right, inferior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.869907 H3K9ac_A549_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null RFX5_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RPL12 Pathway Commons Protein-Protein Interactions 1.0 null ST13 Pathway Commons Protein-Protein Interactions 1.0 null Cortical amygdalar area, posterior part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.09289 KRR1 Pathway Commons Protein-Protein Interactions 1.0 null SP1_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BL6699 (EIF3H) NURSA Protein Complexes 1.0 null Cortical amygdalar area, posterior part, lateral zone Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.00806 EKLF-21900194-ERYTHROCYTE-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-58-8387-01A-11R-2296-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_GM19238_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCC1395 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 1.25322 Lung adenocarcinoma_LUAD_TCGA-49-4494-01A-01R-1206-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null E2F1-17053090-MCF7-human ChEA Transcription Factor Binding Site Profiles 1.0 null dorsolateral prefrontal cortex_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.78519 testisspecific GeneRIF Biological Term Annotations 1.0 null RPS13 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-P4PQ-0005-SM-2HMKJ GTEx Tissue Sample Gene Expression Profiles -1.0 -2.85377 M059J Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -2.18496 H3K27ac_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null FOS_MCF 10A_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_megakaryocyte_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null primary motor cortex (area M1, area 4)_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.11996 POLR2AphosphoS5_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NAMALWA Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.898357 PLK1 Pathway Commons Protein-Protein Interactions 1.0 null subparafascicular nucleus of thalamus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.21167 EP300_GM12878_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-T6MN-2726-SM-4DM77 GTEx Tissue Sample Gene Expression Profiles 1.0 1.3849 intermediate stratum of r9Ve Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.02703 SKNAS CCLE Cell Line Gene CNV Profiles -1.0 -1.65801 NOA1 Pathway Commons Protein-Protein Interactions 1.0 null H3K36me3_GM06990_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-22-5491-01A-01R-1635-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SET Pathway Commons Protein-Protein Interactions 1.0 null Lung adenocarcinoma_LUAD_TCGA-75-6212-01A-11R-1755-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null disease of metabolism DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.047432 RPL37A Pathway Commons Protein-Protein Interactions 1.0 null GTEX-QVJO-0011-R4A-SM-2S1QL GTEx Tissue Sample Gene Expression Profiles 1.0 1.03436 769-P COSMIC Cell Line Gene Mutation Profiles 1.0 null GTEX-XOTO-0011-R3A-SM-4B64W GTEx Tissue Sample Gene Expression Profiles 1.0 1.5731 H3K27ac_HepG2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null TAF1_HeLa-S3_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SRSF7 Pathway Commons Protein-Protein Interactions 1.0 null MDAMB435S CCLE Cell Line Gene CNV Profiles 1.0 1.60837 POLR2A_GM19193_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null LTBR_INHIBITION - 27 Day_GDS2004_736_mouse_Lymph nodes (MG-430A) GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null GTEX-X261-0011-R8A-SM-4E3I5 GTEx Tissue Sample Gene Expression Profiles 1.0 1.92353 MCM5 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-U3ZN-0226-SM-3DB8D GTEx Tissue Sample Gene Expression Profiles -1.0 -1.15105 JUN_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RPL35 Pathway Commons Protein-Protein Interactions 1.0 null sensory system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.043641 temporal neocortex_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.82509 H3K4me2_HepG2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null ventral linear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.0281 HCC1954 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -1.36193 BL1022 (FAM184B) NURSA Protein Complexes 1.0 null COLO 853 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.22604 substantia nigra compacta, m1 part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.1973 SKNFI CCLE Cell Line Gene Expression Profiles 1.0 1.49532 H3K27ac_endothelial cell of umbilical vein_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-WQ-A9G7-01A-11R-A37K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null G130 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.80463 MAFF_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null KCTD12 Pathway Commons Protein-Protein Interactions 1.0 null PRKDC Pathway Commons Protein-Protein Interactions 1.0 null Carcinoma, Hepatocellular CTD Gene-Disease Associations 1.0 1.37705 MAX_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null RELA_GM18951_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WOFL-0006-SM-3TW8K GTEx Tissue Sample Gene Expression Profiles -1.0 -1.76455 intracellular organelle lumen COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.34645 Perturb_11643_KD_KCNQ4_SRP113334 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -1.91911 Proteinuria CTD Gene-Disease Associations 1.0 1.36133 SNRPB2 Pathway Commons Protein-Protein Interactions 1.0 null Birth Weight CTD Gene-Disease Associations 1.0 1.08337 IPO7 Pathway Commons Protein-Protein Interactions 1.0 null BMI1 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me2_myotube_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null RPL27 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_fibroblast of pulmonary artery_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-DK-A2I6-01A-12R-A18C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_G1E-ER4_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null layer IIIa of caudal entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.01276 Kidney renal clear cell carcinoma_KIRC_TCGA-G6-A8L7-01A-11R-A37O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null posterior cortical nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.905053 SAP30_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null cuneiform nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.870598 POU2F2_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Anemia CTD Gene-Disease Associations 1.0 1.23868 Perturb_1204_KO_Sp2/Sp1_SRP302435 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 20.0 CREB1 ENCODE Transcription Factor Targets 1.0 null DHX15 Pathway Commons Protein-Protein Interactions 1.0 null kshv-miR-K12-3-5p MiRTarBase microRNA Targets 1.0 null RPLP1 Pathway Commons Protein-Protein Interactions 1.0 null sirolimus_homo sapiens_gpl2895_gse16944 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null BL8641 (MINK1) NURSA Protein Complexes 1.0 null MAX_MCF-7_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCC2157 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.26802 BHLHE40 ENCODE Transcription Factor Targets 1.0 null EIF3A Pathway Commons Protein-Protein Interactions 1.0 null gland TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.53602 KPNA6 Pathway Commons Protein-Protein Interactions 1.0 null ESF1 Pathway Commons Protein-Protein Interactions 1.0 null ventrolateral prefrontal cortex_11 yrs_F_12289 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.29895 superficial stratum of PO2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.78513 epithelial cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.053018 RPL19 Pathway Commons Protein-Protein Interactions 1.0 null central gray of the pons, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.37942 GTEX-XOTO-0011-R8A-SM-4B65J GTEx Tissue Sample Gene Expression Profiles 1.0 1.46523 CEBPB ENCODE Transcription Factor Targets 1.0 null GTEX-VUSG-0126-SM-4KL1X GTEx Tissue Sample Gene Expression Profiles -1.0 -1.4209 AKAP8 Pathway Commons Protein-Protein Interactions 1.0 null H3K27ac_fibroblast of lung_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null PAX5_GM12878_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null FOXP2-21765815-NEURO2A-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null HDAC2_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PHF8_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PAX5_GM12892_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null QKI Pathway Commons Protein-Protein Interactions 1.0 null CTNNA3 Pathway Commons Protein-Protein Interactions 1.0 null r11 part of the trigeminal column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.37794 ChIP_SOX17_20123909 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null intracellular organelle part LOCATE Curated Protein Localization Annotations 1.0 null VDAC1 Pathway Commons Protein-Protein Interactions 1.0 null TestisIntersitial BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 0.866644 BT483 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -1.15273 GTEX-QDT8-0426-SM-32PKZ GTEx Tissue Sample Gene Expression Profiles -1.0 -0.901555 Uvula (IX), granular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.05713 Dentate nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.15029 GTEX-QVJO-0011-R9A-SM-2S1QH GTEx Tissue Sample Gene Expression Profiles 1.0 1.13924 GTEX-WZTO-0011-R6B-SM-4E3J6 GTEx Tissue Sample Gene Expression Profiles 1.0 1.07294 imatinib_homo sapiens_gpl96_gds3046 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null ILK Pathway Commons Protein-Protein Interactions 1.0 null GTEX-XLM4-0011-R6A-SM-4AT4B GTEx Tissue Sample Gene Expression Profiles 1.0 1.20527 FADU CCLE Cell Line Gene CNV Profiles 1.0 1.56073 central nervous system TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.53602 GTEX-QEL4-1326-SM-447AD GTEx Tissue Sample Gene Expression Profiles -1.0 -1.11638 GTEX-WFG8-0006-SM-3GIKS GTEx Tissue Sample Gene Expression Profiles -1.0 -1.47234 OCI-AML3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.960497 BL269 (MCM8) NURSA Protein Complexes 1.0 null Cardiac Hypertrophy_Myocardial tissue_GSE1621 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -2.15714 C1QBP Pathway Commons Protein-Protein Interactions 1.0 null IRF1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null ILK_activemutant_78_GSE25729 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -2.01426 superficial stratum of r9BI Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.43051 H3K4me1_Brain Cingulate Gyrus Roadmap Epigenomics Histone Modification Site Profiles 1.0 null H3K4me1_osteoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-FS-A1ZY-06A-11R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null heart_6a HPA Tissue Sample Gene Expression Profiles 1.0 1.03122 XAB2 Pathway Commons Protein-Protein Interactions 1.0 null SLC25A1 Pathway Commons Protein-Protein Interactions 1.0 null Prostate adenocarcinoma_PRAD_TCGA-HC-A6AO-01A-11R-A30B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Bed nuclei of the stria terminalis, posterior division, transverse nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.04909 H3K4me3_H1-hESC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null pancreas_6a HPA Tissue Sample Gene Expression Profiles -1.0 -1.22175 EIF2S3 Pathway Commons Protein-Protein Interactions 1.0 null KYSE-270 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.902426 PPIE Pathway Commons Protein-Protein Interactions 1.0 null YWHAZ Pathway Commons Protein-Protein Interactions 1.0 null GTEX-X4XX-0011-R10B-SM-46MWO GTEx Tissue Sample Gene Expression Profiles 1.0 1.27628 GTEX-PVOW-2726-SM-48TCA GTEx Tissue Sample Gene Expression Profiles 1.0 1.68361 CREB1 ChEA Transcription Factor Targets 1.0 null SYNCRIP Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_endothelial cell of umbilical vein_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null RRP7A Pathway Commons Protein-Protein Interactions 1.0 null HIPK2_knockdown_106_GSE27869 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -3.28144 ITGA4 Pathway Commons Protein-Protein Interactions 1.0 null upper (rostral) rhombic lip Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.82137 H3K9ac_Adipose Nuclei Roadmap Epigenomics Histone Modification Site Profiles 1.0 null organelle lumen COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 KNS-81-FD GDSC Cell Line Gene Expression Profiles -1.0 -1.84758 GTEX-T5JC-0011-R1A-SM-32PM6 GTEx Tissue Sample Gene Expression Profiles 1.0 0.903024 Fetal_Intestine_Small Roadmap Epigenomics Cell and Tissue Gene Expression Profiles -1.0 -1.43854 Perturb_12848_KO_Kdm4a_SRP192379 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 3.6759 PSMC5 Pathway Commons Protein-Protein Interactions 1.0 null MYC_Activation - 4 hours_GDS2025_724_mouse_Pancreatic islet beta cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null COV362 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.46492 MYBL2_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SRI Pathway Commons Protein-Protein Interactions 1.0 null CDC5L Pathway Commons Protein-Protein Interactions 1.0 null hsa-miR-3189-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.07142 r7 part of parvocellular medial vestibular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.66584 TAF1_GM12891_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ELF1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null orbital frontal cortex_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.01617 HNRNPC Pathway Commons Protein-Protein Interactions 1.0 null GTEX-PW2O-0826-SM-48TC5 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.01327 E2F6_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_GM12892_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null EIF4H Pathway Commons Protein-Protein Interactions 1.0 null POLR2AphosphoS5_GM12891_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null intracellular membrane-bounded organelle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.043339 NCL Pathway Commons Protein-Protein Interactions 1.0 null SNRPC Pathway Commons Protein-Protein Interactions 1.0 null describe GeneRIF Biological Term Annotations 1.0 null DDX42 Pathway Commons Protein-Protein Interactions 1.0 null hsa-miR-4698 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.40969 JHOM2B CCLE Cell Line Gene CNV Profiles -1.0 -1.52909 ITSN2 Pathway Commons Protein-Protein Interactions 1.0 null methotrexate_homo sapiens_gpl96_gse5118 GEO Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Primary pulmonary hypoplasia_Lung Tissue_GSE1363 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -1.45218 QARS Pathway Commons Protein-Protein Interactions 1.0 null RPL30 Pathway Commons Protein-Protein Interactions 1.0 null nucleoli GeneRIF Biological Term Annotations 1.0 null POLR2A_A549_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null SON Pathway Commons Protein-Protein Interactions 1.0 null REST ENCODE Transcription Factor Targets 1.0 null hsa-miR-3173-5p TargetScan Predicted Conserved microRNA Targets 1.0 0.90397 APOBEC3C Pathway Commons Protein-Protein Interactions 1.0 null GTEX-UTHO-0006-SM-3NMCC GTEx Tissue Sample Gene Expression Profiles -1.0 -1.00028 Processing of Capped Intron-Containing Pre-mRNA Reactome Pathways 2014 1.0 null TAF1_GM12892_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null FLT4_knockdown_103_GSE27869 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -1.99773 POLR2AphosphoS2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NFKB1 JASPAR Predicted Transcription Factor Targets 1.0 null PRPF40A Pathway Commons Protein-Protein Interactions 1.0 null superficial stratum of TPaA Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.67299 H3K4me3_cardiac mesoderm_hg19_4 ENCODE Histone Modification Site Profiles 1.0 null RERF-LC-KJ Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.0538 EPS15 Pathway Commons Protein-Protein Interactions 1.0 null Cognition Disorders CTD Gene-Disease Associations 1.0 1.50223 19061838-TableS7 GeneSigDB Published Gene Signatures 1.0 null SU-DHL-8 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.95823 17043639-Table4 GeneSigDB Published Gene Signatures 1.0 null adrenal gland HPA Tissue Protein Expression Profiles 1.0 1.13616 YMB-1-E Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.32858 BL6983 (ZBTB40) NURSA Protein Complexes 1.0 null SSB Pathway Commons Protein-Protein Interactions 1.0 null HCC2218 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.878411 paraventricular nuclei, left of thalamus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.72886 JHH2 CCLE Cell Line Gene CNV Profiles 1.0 1.83882 MDH2 Pathway Commons Protein-Protein Interactions 1.0 null PTGES3 Pathway Commons Protein-Protein Interactions 1.0 null pancreas GTEx Tissue Gene Expression Profiles -1.0 -1.18405 GTEX-RTLS-0426-SM-2TF5K GTEx Tissue Sample Gene Expression Profiles -1.0 -0.935626 SK-MEL-28 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.942237 periventricular stratum of r7Ve Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.66766 NONO Pathway Commons Protein-Protein Interactions 1.0 null PSMB3 Pathway Commons Protein-Protein Interactions 1.0 null cell part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.047828 SC-8002 (ESR1) NURSA Protein Complexes 1.0 null LYPLA1 Pathway Commons Protein-Protein Interactions 1.0 null MDAMB453 CCLE Cell Line Gene Expression Profiles 1.0 1.34874 H3K4me1_A549_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null REST_HL-60_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAX_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null RIF1 Hub Proteins Protein-Protein Interactions 1.0 null GTEX-N7MT-0126-SM-2D7VT GTEx Tissue Sample Gene Expression Profiles -1.0 -0.826392 YY1 Pathway Commons Protein-Protein Interactions 1.0 null CSDE1 Pathway Commons Protein-Protein Interactions 1.0 null H3K27ac_fibroblast of lung_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_cardiac muscle cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null MYBL2_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null G-402 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.01247 UCSD-242L Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.24014 MFE-319 COSMIC Cell Line Gene Mutation Profiles 1.0 null LARS Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_WERI-Rb-1_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null epithelial cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.05178 POLR2A_HCT116_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null hsa-miR-1202 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.921135 periventricular stratum of Hb Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.89838 BHLHE40_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null bladder TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null KMS20 CCLE Cell Line Gene Expression Profiles -1.0 -1.79489 MYC_K562_hg19_6 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-S7SF-0006-SM-3K2B6 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.43774 fat_x1.V2 HPA Tissue Sample Gene Expression Profiles -1.0 -0.980161 intermediate stratum of THyB-V Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.02082 H3K9ac_MEL cell line_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null POLR2AphosphoS5_PFSK-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-S4UY-0008-SM-3NM8H GTEx Tissue Sample Gene Expression Profiles 1.0 1.2729 MOGS Pathway Commons Protein-Protein Interactions 1.0 null MYL4 Pathway Commons Protein-Protein Interactions 1.0 null BACH1_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null smallintestine_4c HPA Tissue Sample Gene Expression Profiles -1.0 -0.852859 PRDX1 Pathway Commons Protein-Protein Interactions 1.0 null CTCF_GM12878_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null RPL4 Pathway Commons Protein-Protein Interactions 1.0 null MIF Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_K562_hg19_8 ENCODE Transcription Factor Binding Site Profiles 1.0 null HBL-100 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.15869 VZ in superolateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.90333 TAF1_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SP1_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ACO2 Pathway Commons Protein-Protein Interactions 1.0 null superficial stratum of r7Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.33124 inferolateral temporal cortex (area TEv, area 20)_8 yrs_M_12981 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.36724 MIAPACA2 Achilles Cell Line Gene Essentiality Profiles -1.0 -1.29096 SIN3A_PFSK-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null posteromedial cortical amygdaloid area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.29296 GTEX-T6MN-2526-SM-32PMN GTEx Tissue Sample Gene Expression Profiles 1.0 1.06654 UACC-812 GDSC Cell Line Gene Expression Profiles -1.0 -2.10236 ELF1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ELAVL1 Pathway Commons Protein-Protein Interactions 1.0 null HMGB1 Pathway Commons Protein-Protein Interactions 1.0 null periventricular stratum of r2Ve Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.68461 CAL-120 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.86425 SNUC5 CCLE Cell Line Gene CNV Profiles 1.0 2.25012 Lung squamous cell carcinoma_LUSC_TCGA-77-6845-01A-11R-1949-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null r4 part of ventral lateral lemniscal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.10385 head of caudate Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.871473 H3K36me3_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAZ_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WFJO-1026-SM-3GIKL GTEx Tissue Sample Gene Expression Profiles -1.0 -0.928379 H3K4me3_HEK293_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null rna splicing GO Biological Process Annotations 2015 1.0 null AQR Pathway Commons Protein-Protein Interactions 1.0 null AP2M1 Pathway Commons Protein-Protein Interactions 1.0 null PK59 CCLE Cell Line Gene CNV Profiles -1.0 -1.60928 GTEX-QMR6-0011-R10A-SM-32PKO GTEx Tissue Sample Gene Expression Profiles 1.0 1.26458 NCI-H292 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.37949 interpeduncular nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.72217 GTEX-REY6-1226-SM-48FDR GTEx Tissue Sample Gene Expression Profiles -1.0 -0.942777 H3K4me2_fibroblast of dermis_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null YY1_K562_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H345 GDSC Cell Line Gene Expression Profiles -1.0 -2.49411 NOP9 Pathway Commons Protein-Protein Interactions 1.0 null H3K9ac_mammary epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null VZ in midlateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.74434 primary somatosensory cortex (area S1, areas 3,1,2)_37 yrs_M_12303 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.985644 NCI-H1581 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.06872 OV-90 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.73289 Liver hepatocellular carcinoma_LIHC_TCGA-CC-5259-01A-31R-A213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CDK19_knockdown_162_GSE38061 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations 1.0 1.77755 SW 948 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.840999 intermediate stratum of JcPD Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.2017 shsy5y HPA Cell Line Gene Expression Profiles -1.0 -0.937251 r9 part of paragigantocellular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.42976 urinary bladder HPA Tissue Protein Expression Profiles 1.0 1.13616 BL3234 (DDX27) NURSA Protein Complexes 1.0 null NCIH292 CCLE Cell Line Gene CNV Profiles -1.0 -3.21049 GTEX-UTHO-3026-SM-3GAFB GTEx Tissue Sample Gene Expression Profiles 1.0 0.982464 DBN1 Pathway Commons Protein-Protein Interactions 1.0 null primary visual cortex (striate cortex, area V1/17)_15 yrs_M_12299 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.940461 RBBP5 ENCODE Transcription Factor Targets 1.0 null SUZ12 Pathway Commons Protein-Protein Interactions 1.0 null RUVBL1 Hub Proteins Protein-Protein Interactions 1.0 null GP1BB Pathway Commons Protein-Protein Interactions 1.0 null STRAP Pathway Commons Protein-Protein Interactions 1.0 null GTEX-SN8G-0006-SM-32PLD GTEx Tissue Sample Gene Expression Profiles -1.0 -1.3474 small nuclear ribonucleoprotein complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.602752 H3K4me3_CD14-positive monocyte_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-P44H-0011-R8A-SM-2XCEL GTEx Tissue Sample Gene Expression Profiles 1.0 1.20536 H3K4me3_Adipose Nuclei Roadmap Epigenomics Histone Modification Site Profiles 1.0 null urogenital system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.051837 SMARCA4 Pathway Commons Protein-Protein Interactions 1.0 null Nerve Degeneration CTD Gene-Disease Associations 1.0 1.17101 disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.04068 ELF1_SK-N-SH_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Thrombocytopenia_Megakaryocyte_GSE2527 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 2.9846 TECR Pathway Commons Protein-Protein Interactions 1.0 null dorsal part of JcP Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.20288 Brain Lower Grade Glioma_LGG_TCGA-P5-A77X-01A-11R-A32Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Perturb_12168_OE_ZEB1_SRP178052 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 3.09284 GTEX-NPJ8-0011-R8a-SM-2HMLG GTEx Tissue Sample Gene Expression Profiles 1.0 2.24964 PUF60 Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RAP1B Pathway Commons Protein-Protein Interactions 1.0 null OV-90 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.52737 H3K4me1_G1E_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-Q2AG-0011-R10A-SM-2HMLA GTEx Tissue Sample Gene Expression Profiles 1.0 1.40332 COASY Pathway Commons Protein-Protein Interactions 1.0 null GTEX-OHPL-1026-SM-3MJGI GTEx Tissue Sample Gene Expression Profiles -1.0 -0.825332 PML_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null gata4_21746915_heart_lof_mouse_gpl6246_gds3931 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations -1.0 -0.99822 AK2 Pathway Commons Protein-Protein Interactions 1.0 null SUPT5H Pathway Commons Protein-Protein Interactions 1.0 null globus pallidus, external segment, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.849837 E2F1 ChEA Transcription Factor Targets 1.0 null Lung adenocarcinoma_LUAD_TCGA-49-4506-01A-01R-1206-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Hypertension CTD Gene-Disease Associations 1.0 1.35184 Fetal Death CTD Gene-Disease Associations 1.0 1.14919 CREB1-20920259-GC1-SPG-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null GTEX-S4Z8-0526-SM-4AD4T GTEx Tissue Sample Gene Expression Profiles -1.0 -1.24062 SOX2 ChEA Transcription Factor Targets 1.0 null BL1016 (INTS6) NURSA Protein Complexes 1.0 null EEF1G Pathway Commons Protein-Protein Interactions 1.0 null GTEX-WWYW-0011-R1A-SM-3TW8G GTEx Tissue Sample Gene Expression Profiles 1.0 1.26236 DPY30 Pathway Commons Protein-Protein Interactions 1.0 null nuclear lumen COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.415337 GTEX-QEG4-1226-SM-2S1P6 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.845146 GTEX-WFON-0001-SM-3P61W GTEx Tissue Sample Gene Expression Profiles 1.0 0.919396 pancreas_6b HPA Tissue Sample Gene Expression Profiles -1.0 -1.32743 POLR2A_GM15510_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CDK8_knockdown_129_GSE30816 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -1.7421 r8 part of the paragigantocellular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.57202 BL239 (RAD17) NURSA Protein Complexes 1.0 null urogenital system TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.53602 Brain Lower Grade Glioma_LGG_TCGA-S9-A6WI-01A-21R-A33Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Measles Chicago-1_24Hour_16492729_GSE980 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.52229 STAT5B Pathway Commons Protein-Protein Interactions 1.0 null HNRNPM Pathway Commons Protein-Protein Interactions 1.0 null mrna processing GO Biological Process Annotations 2015 1.0 null testosterone_mus musculus_gpl1261_gse17553 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-UPIC-0005-SM-3GACV GTEx Tissue Sample Gene Expression Profiles -1.0 -1.33457 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5185-01A-01R-1426-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BL3173 (MAVS) NURSA Protein Complexes 1.0 null PRPF8 Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_small intestine_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PCM1 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me1_Adult Kidney Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Kidney Chromophobe_KICH_TCGA-KN-8430-01A-11R-2315-07 TCGA Signatures of Differentially Expressed Genes for Tumors -1.0 null CTCF_astrocyte of the cerebellum_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null other GeneRIF Biological Term Annotations 1.0 null GSK3A_knockdown_207_GDS4305 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -1.35795 ventrolateral prefrontal cortex_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.834732 SSR3 Pathway Commons Protein-Protein Interactions 1.0 null solution GeneRIF Biological Term Annotations 1.0 null HDAC2_H1-hESC_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_7485_OE_Mir489_SRP155560 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 6.41047 GSTP1 Pathway Commons Protein-Protein Interactions 1.0 null HOXC9-25013753-NEUROBLASTOMA BE2-C-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null Ventral premammillary nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.54678 SKMEL2 CCLE Cell Line Gene Expression Profiles 1.0 3.40632 TRMT112 Pathway Commons Protein-Protein Interactions 1.0 null Primary somatosensory area, unassigned, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.01616 SP4_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAX_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-QDT8-0011-R2A-SM-32PKQ GTEx Tissue Sample Gene Expression Profiles 1.0 0.948649 MYC_MCF 10A_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null DIMT1 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me2_osteoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null TAF1 ENCODE Transcription Factor Targets 1.0 null POLR2B Pathway Commons Protein-Protein Interactions 1.0 null MDAMB231 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 1.03881 hsa-miR-1207-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.7397 r8 part of lateral reticular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.17925 Lung adenocarcinoma_LUAD_TCGA-50-5931-01A-11R-1755-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null RPL17 Pathway Commons Protein-Protein Interactions 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-66-2794-01A-01R-1201-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TAF1_SK-N-SH_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null UTP14A Pathway Commons Protein-Protein Interactions 1.0 null CA4 field, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.12363 GTEX-WZTO-0011-R8A-SM-4E3II GTEx Tissue Sample Gene Expression Profiles 1.0 2.87412 GDI2 Pathway Commons Protein-Protein Interactions 1.0 null intermediate part of the arcuate nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.32984 POLR2A_liver_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null r5 part of the cochlear column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.10987 GTEX-WEY5-0006-SM-3GIKG GTEx Tissue Sample Gene Expression Profiles -1.0 -2.33973 POLR2AphosphoS2_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GSTK1 Pathway Commons Protein-Protein Interactions 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4352-01A-01R-1289-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CHD2_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null DMS 53 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.21506 fasciola cinerea Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.28605 H3K9ac_K562_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-RVPU-0011-R1A-SM-2XCAI GTEx Tissue Sample Gene Expression Profiles -1.0 -0.8259 YY1_SK-N-SH_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null KDM5B_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null 16115948-Table2 GeneSigDB Published Gene Signatures 1.0 null Hepatomegaly CTD Gene-Disease Associations 1.0 1.44544 VPS28 Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_endothelial cell of umbilical vein_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null SART1 Pathway Commons Protein-Protein Interactions 1.0 null mantle zone of r7Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.44416 SIN3A_HCT116_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null nucleoplasm part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.417685 RCOR1_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-T5JC-2426-SM-3NMDB GTEx Tissue Sample Gene Expression Profiles 1.0 1.33174 CADM1_Deficiency_GDS2027_722_mouse_Testis GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null 20368555-TS-1 GeneSigDB Published Gene Signatures 1.0 null H3K4me3_erythroblast_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null FOXP2-23625967-PFSK-1 AND SK-N-MC-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null liver_c HPA Tissue Sample Gene Expression Profiles -1.0 -2.16803 GTEX-Q2AG-0011-R11A-SM-2HMKZ GTEx Tissue Sample Gene Expression Profiles 1.0 1.14913 liver HPA Tissue Gene Expression Profiles -1.0 -1.53414 Weight Loss CTD Gene-Disease Associations 1.0 1.53941 primary somatosensory cortex (area S1, areas 3,1,2)_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -2.61333 G6PD Pathway Commons Protein-Protein Interactions 1.0 null tail of caudate nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.18924 TAF1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GNB1L Pathway Commons Protein-Protein Interactions 1.0 null GTEX-N7MS-0126-SM-3TW8O GTEx Tissue Sample Gene Expression Profiles 1.0 0.882973 MRPS6 Pathway Commons Protein-Protein Interactions 1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2908-03A-01T-0740-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-WZTO-0011-R11A-SM-4E3K9 GTEx Tissue Sample Gene Expression Profiles 1.0 1.62025 RPL10 Pathway Commons Protein-Protein Interactions 1.0 null RNH1 Pathway Commons Protein-Protein Interactions 1.0 null SEPT7 Pathway Commons Protein-Protein Interactions 1.0 null Drug-Related Side Effects and Adverse Reactions CTD Gene-Disease Associations 1.0 1.42454 Folic Acid CTD Gene-Chemical Interactions 1.0 null doxycycline_homo sapiens_gpl570_gse21912 GEO Signatures of Differentially Expressed Genes for Small Molecules -1.0 null PRDX3 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_H7_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null CTCF_lung_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ZNF384_ES-E14_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SPI1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BCPAP CCLE Cell Line Gene Expression Profiles -1.0 -1.84884 WRAP53 Pathway Commons Protein-Protein Interactions 1.0 null CTCF_MCF-7_hg19_7 ENCODE Transcription Factor Binding Site Profiles 1.0 null MYC_Activation - 8 hours_GDS2025_725_mouse_Pancreatic islet beta cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null head TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.53602 hsa-miR-4653-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.07142 digits BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -0.909595 intracellular organelle LOCATE Curated Protein Localization Annotations 1.0 null imatinib_homo sapiens_gpl96_gds3049 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null BT-20 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.829052 inferolateral temporal cortex (area TEv, area 20)_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.57532 POLR2A_limb_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null liver_a HPA Tissue Sample Gene Expression Profiles -1.0 -1.34614 intermediate stratum of the VAP Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.06378 SLR24 CCLE Cell Line Gene CNV Profiles -1.0 -1.37865 Uterine Carcinosarcoma_UCS_TCGA-N9-A4Q7-01A-11R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null AHNAK Pathway Commons Protein-Protein Interactions 1.0 null ChIP_H3K36me3_18692474_mouseESC ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null POLR2A_GM12878_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-R55E-0011-R9A-SM-2TC6C GTEx Tissue Sample Gene Expression Profiles 1.0 0.950699 H3K4me2_astrocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null choroid plexus of the fourth ventricle Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.91202 KELLY CCLE Cell Line Gene Expression Profiles 1.0 1.56036 H3K27ac_myotube_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null AB80 (BRCA1) NURSA Protein Complexes 1.0 null supraoptic nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.943136 MAX_SK-N-SH_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null superficial stratum of r4BL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.14155 GTEX-T5JC-0005-SM-4DM7B GTEx Tissue Sample Gene Expression Profiles -1.0 -1.64959 POLR1C Pathway Commons Protein-Protein Interactions 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-UY-A9PE-01A-11R-A38B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null lateral trapezoid nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.41159 H3K4me3_GM12878_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null FLI1 ENCODE Transcription Factor Targets 1.0 null dorsolateral prefrontal cortex_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.08723 RERFLCAD1 CCLE Cell Line Gene Expression Profiles -1.0 -1.46893 MXI1_SK-N-SH_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null DDRGK1 Pathway Commons Protein-Protein Interactions 1.0 null H4K20me1_skeletal muscle myoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null SAR1A Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BL6090 (PHC3) NURSA Protein Complexes 1.0 null Perturb_11647_KD_LOC399818_SRP113334 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -5.68679 GTEX-X585-0011-R4B-SM-46MVH GTEx Tissue Sample Gene Expression Profiles 1.0 0.945909 NRF1_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TCF12 ENCODE Transcription Factor Targets 1.0 null captopril_mus musculus_gpl1261_gds3683 GEO Signatures of Differentially Expressed Genes for Small Molecules -1.0 null VDR-23849224-CD4+-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null Rectum adenocarcinoma_READ_TCGA-CI-6623-01B-11R-1830-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-X4XX-0011-R11A-SM-46MWQ GTEx Tissue Sample Gene Expression Profiles 1.0 0.835665 GTEX-QVUS-0011-R10A-SM-3GIK3 GTEx Tissue Sample Gene Expression Profiles 1.0 1.01825 CTCF_kidney_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null viscus TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.0758 MXI1_IMR-90_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-SNOS-0008-SM-4DM6I GTEx Tissue Sample Gene Expression Profiles 1.0 0.885655 CD2BP2 Pathway Commons Protein-Protein Interactions 1.0 null MYC_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-X4XY-1726-SM-46MVO GTEx Tissue Sample Gene Expression Profiles -1.0 -0.931793 NB7 GDSC Cell Line Gene Expression Profiles -1.0 -1.9126 TCF4 ChEA Transcription Factor Targets 1.0 null EGR1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_olfactory bulb_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GAR1 Pathway Commons Protein-Protein Interactions 1.0 null colon BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.8647 tip48 GeneRIF Biological Term Annotations 1.0 null VZ in septal region Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.42576 anterior (rostral) cingulate (medial prefrontal) cortex_8 yrs_M_12981 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 3.61721 EP300_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null E2F6_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PGAM5 Pathway Commons Protein-Protein Interactions 1.0 null Atrophy CTD Gene-Disease Associations 1.0 1.35271 spleen HPA Tissue Protein Expression Profiles -1.0 -0.935947 nucleus LOCATE Curated Protein Localization Annotations 1.0 null superficial stratum of the Fc Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.28605 fat_e HPA Tissue Sample Gene Expression Profiles -1.0 -1.35178 KNS81 CCLE Cell Line Gene CNV Profiles -1.0 -1.59496 H3K4me2_CH12.LX_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null YMB1 CCLE Cell Line Gene CNV Profiles -1.0 -1.38368 GTEX-Q2AI-0006-SM-2I3FG GTEx Tissue Sample Gene Expression Profiles -1.0 -1.85027 ARF6 Pathway Commons Protein-Protein Interactions 1.0 null SIN3A_Panc1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ACLY Pathway Commons Protein-Protein Interactions 1.0 null STAT4-19710469-TH1 cell mouse-mouse ChEA Transcription Factor Binding Site Profiles 1.0 null CAPAN-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.11933 CTCF_GM12873_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-NPJ8-0011-R1a-SM-33HCB GTEx Tissue Sample Gene Expression Profiles -1.0 -0.862496 lateral hypothalamic area, anterior region, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.5587 superficial stratum of THyB-P Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.25784 DDX23 Pathway Commons Protein-Protein Interactions 1.0 null CA3 field, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.10442 cellular_component COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 TAF1_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null superficial stratum of m1B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.03459 ChIP_CNOT3_19339689 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null cytoplasm LOCATE Predicted Protein Localization Annotations 1.0 null SKMEL2 CCLE Cell Line Gene CNV Profiles 1.0 3.2803 nucleic acid binding GO Molecular Function Annotations 2015 1.0 null CSTB_KO_GDS5090_200_mouse_Cerebellar granule cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null RSRC1 Pathway Commons Protein-Protein Interactions 1.0 null NELFE ENCODE Transcription Factor Targets 1.0 null GTEX-P4QR-0006-SM-2I5GN GTEx Tissue Sample Gene Expression Profiles -1.0 -1.05676 membrane-enclosed lumen COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.343799 GALE Pathway Commons Protein-Protein Interactions 1.0 null ventral posterior medial nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.922856 H3K4me3_cardiac mesoderm_hg19_7 ENCODE Histone Modification Site Profiles 1.0 null CSTB_KO_GDS5090_398_mouse_cerebella GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null GTEX-UTHO-2926-SM-3P5Z9 GTEx Tissue Sample Gene Expression Profiles 1.0 1.30235 Prostate adenocarcinoma_PRAD_TCGA-H9-A6BY-01A-11R-A30B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2A_thymus_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XXEK-0626-SM-4BRWE GTEx Tissue Sample Gene Expression Profiles 1.0 0.833881 RBM26 Pathway Commons Protein-Protein Interactions 1.0 null Adrenocortical carcinoma_ACC_TCGA-OR-A5LG-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null valproic acid_homo sapiens_gpl6883_gse26940 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null SNW1 Pathway Commons Protein-Protein Interactions 1.0 null cisplatin_dictyostelium discoideum_gpl5382_gse8287 GEO Signatures of Differentially Expressed Genes for Small Molecules -1.0 null POLR2A_HeLa-S3_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null membrane-bounded organelle GO Cellular Component Annotations 2015 1.0 null ELF1_MCF-7_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_1200_KO_Maz/Sp1_SRP302435 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 20.0 CTCF_cardiac fibroblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null whole body TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null GTEX-XXEK-1226-SM-4BRUY GTEx Tissue Sample Gene Expression Profiles 1.0 0.933159 paracentral lobule, posterior part, left, bank of cingulate sulcus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.88137 HDAC2_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-X5EB-1426-SM-46MVW GTEx Tissue Sample Gene Expression Profiles -1.0 -0.844693 CHTOP Pathway Commons Protein-Protein Interactions 1.0 null C170 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.02756 GTEX-R55F-0005-SM-2TF4W GTEx Tissue Sample Gene Expression Profiles -1.0 -2.63911 RPL24 Pathway Commons Protein-Protein Interactions 1.0 null PYCR2 Pathway Commons Protein-Protein Interactions 1.0 null SNUC5 CCLE Cell Line Gene Expression Profiles 1.0 1.98203 EPLC272H CCLE Cell Line Gene CNV Profiles 1.0 1.38789 H3K4me3_K562_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null BL9240 (GREB1) NURSA Protein Complexes 1.0 null r8 part of parvocellular medial vestibular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.1259 ARCN1 Pathway Commons Protein-Protein Interactions 1.0 null MRPS18B Pathway Commons Protein-Protein Interactions 1.0 null 17616640-TableS3 GeneSigDB Published Gene Signatures 1.0 null FLOT1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-XMD1-0006-SM-4AT4Q GTEx Tissue Sample Gene Expression Profiles -1.0 -1.29178 POLR2AphosphoS5_PFSK-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2AphosphoS5_SK-N-MC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BL436 (NCOA2) NURSA Protein Complexes 1.0 null MRPL9 Pathway Commons Protein-Protein Interactions 1.0 null MYH10 Pathway Commons Protein-Protein Interactions 1.0 null whole body TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.23362 CTCF_spleen_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-G6-A5PC-01A-11R-A33J-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null LS1034 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.04998 MAX_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null KRT18 Pathway Commons Protein-Protein Interactions 1.0 null dorsolateral prefrontal cortex_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -2.07741 NCI-H187 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.88712 shell of SCH Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.45444 GTEX-T5JC-0011-R11A-SM-32PMB GTEx Tissue Sample Gene Expression Profiles 1.0 0.863955 ACACA Pathway Commons Protein-Protein Interactions 1.0 null HNRNPK Pathway Commons Protein-Protein Interactions 1.0 null TCF12_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SP1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null regulate GeneRIF Biological Term Annotations 1.0 null BL938 (SP1) NURSA Protein Complexes 1.0 null HSPA1B Pathway Commons Protein-Protein Interactions 1.0 null MSN Pathway Commons Protein-Protein Interactions 1.0 null liver_d HPA Tissue Sample Gene Expression Profiles -1.0 -1.68409 ARF1 Pathway Commons Protein-Protein Interactions 1.0 null hsa-miR-4755-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.55165 CD3EAP Pathway Commons Protein-Protein Interactions 1.0 null AIMP1 Pathway Commons Protein-Protein Interactions 1.0 null H3K27ac_bone marrow_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null internal female genital organ TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.23362 H3K27ac_K562_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null nervous system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.041316 Perturb_11218_KO_MTA2_SRP396801 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 GTEX-RU72-0011-R11A-SM-2TF6J GTEx Tissue Sample Gene Expression Profiles 1.0 0.898138 GTEX-TML8-0005-SM-32QPA GTEx Tissue Sample Gene Expression Profiles -1.0 -0.992341 GTEX-XPVG-0006-SM-4B65Z GTEx Tissue Sample Gene Expression Profiles -1.0 -1.98836 BL2431 (NCOA5) NURSA Protein Complexes 1.0 null POLR2A_GM12878_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-Q2AG-1026-SM-33HBW GTEx Tissue Sample Gene Expression Profiles -1.0 -0.829573 CTCF_GM12867_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CDKN2C Pathway Commons Protein-Protein Interactions 1.0 null VZ in inferolateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.928277 GABPA_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_GM12864_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null superficial stratum of POH Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 3.36916 H3K4me3_G1E-ER4_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null mantle zone of r11Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.37794 TALDO1 Pathway Commons Protein-Protein Interactions 1.0 null hippocampus (hippocampal formation)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.61514 GTEX-TKQ1-0008-SM-4DXSO GTEx Tissue Sample Gene Expression Profiles 1.0 0.925306 Prostate adenocarcinoma_PRAD_TCGA-EJ-7325-01B-11R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null primary somatosensory cortex (area S1, areas 3,1,2)_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.874625 TCF7L2_Panc1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H596 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.8213 H3K4me3_astrocyte of the spinal cord_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H3K4me1_fibroblast of lung_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null MYC_K562_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null PAFAH1B3 Pathway Commons Protein-Protein Interactions 1.0 null CTCF_GM12892_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null E2F4_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null adrenal gland HPA Tissue Gene Expression Profiles 1.0 1.24922 PRPF19 Pathway Commons Protein-Protein Interactions 1.0 null NCI-H1703 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.12796 Kidney Chromophobe_KICH_TCGA-KM-8476-01A-11R-2315-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null anterior amygdaloid area Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.32025 16141321-Table2 GeneSigDB Published Gene Signatures 1.0 null GTEX-XBED-0003-SM-47JWP GTEx Tissue Sample Gene Expression Profiles 1.0 0.869808 PANC 02.03 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.32858 hsa-miR-4668-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 0.843347 macromolecule metabolic process GO Biological Process Annotations 2015 1.0 null directed GeneRIF Biological Term Annotations 1.0 null SRSF4 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-TKQ2-1726-SM-4DXUP GTEx Tissue Sample Gene Expression Profiles -1.0 -1.29331 dorsal spiriform nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.06578 Liver Diseases CTD Gene-Disease Associations 1.0 1.35531 OE19 GDSC Cell Line Gene Expression Profiles 1.0 2.56646 GTEX-X8HC-0006-SM-46MV6 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.13202 ZW10 Pathway Commons Protein-Protein Interactions 1.0 null BL7656 (C2orf3) NURSA Protein Complexes 1.0 null TFB2M Pathway Commons Protein-Protein Interactions 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-DD-A1EJ-01A-11R-A155-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-RVPV-0011-R3A-SM-2TF63 GTEx Tissue Sample Gene Expression Profiles 1.0 0.842612 ESD Pathway Commons Protein-Protein Interactions 1.0 null MAX_A549_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null ACTR3 Pathway Commons Protein-Protein Interactions 1.0 null silver-russell syndrome DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 1.26778 SC-6062 (RORA) NURSA Protein Complexes 1.0 null TARS Pathway Commons Protein-Protein Interactions 1.0 null Brain Lower Grade Glioma_LGG_TCGA-FG-7636-01A-11R-2090-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null EZH2_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K9ac_Rectal Smooth Muscle Roadmap Epigenomics Histone Modification Site Profiles 1.0 null organic cyclic compound binding GO Molecular Function Annotations 2015 1.0 null URB1 Pathway Commons Protein-Protein Interactions 1.0 null EXOSC4 Pathway Commons Protein-Protein Interactions 1.0 null PK-59 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.28133 SARS-BatSRBD_84Hour_23935999_GSE47960 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.72531 GTEX-Q2AG-0011-R4A-SM-2HMKA GTEx Tissue Sample Gene Expression Profiles 1.0 1.52513 retinal degeneration DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.276514 primary auditory cortex (core)_25 pcw_F_12948 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.826305 gallbladder HPA Tissue Protein Expression Profiles 1.0 1.13616 r7 part of paragigantocellular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.82677 NFIC_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ZR-75-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.32964 primary motor cortex (area M1, area 4)_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.00219 H3K4me3_cardiac fibroblast_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null Hepatitis, Autoimmune_Hepatic Tissue_GSE867 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 2.10764 membrane-bounded organelle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.043264 GTEX-TSE9-0011-R8A-SM-3DB7R GTEx Tissue Sample Gene Expression Profiles 1.0 2.27164 H2AFZ_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null mantle zone of THyB-I Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.08291 Kidney renal papillary cell carcinoma_KIRP_TCGA-J7-A8I2-01A-12R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-T6MO-0006-SM-32QOU GTEx Tissue Sample Gene Expression Profiles -1.0 -2.46177 MAPRE1 Pathway Commons Protein-Protein Interactions 1.0 null SW1573 CCLE Cell Line Gene CNV Profiles -1.0 -1.34519 RCOR1 ENCODE Transcription Factor Targets 1.0 null caudal prosubiculum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.837522 inferolateral temporal cortex (area TEv, area 20)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.3086 CSTF3 Pathway Commons Protein-Protein Interactions 1.0 null SCLC21H CCLE Cell Line Gene CNV Profiles -1.0 -1.4136 TXN Pathway Commons Protein-Protein Interactions 1.0 null UACC812 CCLE Cell Line Gene Expression Profiles -1.0 -1.71868 GTEX-P4QT-2426-SM-3NMCL GTEx Tissue Sample Gene Expression Profiles 1.0 1.16305 FOS_MCF 10A_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null UBE2L3 Pathway Commons Protein-Protein Interactions 1.0 null Adrenocortical carcinoma_ACC_TCGA-OR-A5LA-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me1_megakaryocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null intracellular organelle lumen COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 ZC3H18 Pathway Commons Protein-Protein Interactions 1.0 null EPLC-272H Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.15991 AGFG1 Pathway Commons Protein-Protein Interactions 1.0 null MRPS23 Pathway Commons Protein-Protein Interactions 1.0 null PAICS Pathway Commons Protein-Protein Interactions 1.0 null SEC61B Pathway Commons Protein-Protein Interactions 1.0 null HNRNPU Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_heart_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null TRAF6 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_CH12.LX_mm9_5 ENCODE Histone Modification Site Profiles 1.0 null XRCC6 Hub Proteins Protein-Protein Interactions 1.0 null GTEX-WVLH-0011-R2A-SM-3MJFJ GTEx Tissue Sample Gene Expression Profiles 1.0 1.67562 H3K4me3_BE2C_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null KMS28BM CCLE Cell Line Gene CNV Profiles -1.0 -1.99444 GTEX-NL3H-0011-R3a-SM-2I3GL GTEx Tissue Sample Gene Expression Profiles 1.0 0.842924 pontobulbar body Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.853403 MYC_MCF-7_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null PRPF4B Pathway Commons Protein-Protein Interactions 1.0 null KRT2 Pathway Commons Protein-Protein Interactions 1.0 null mRNA_TCF3_20139965 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells -1.0 null LRRC59 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_SK-N-MC_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null STOM Pathway Commons Protein-Protein Interactions 1.0 null cell property TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.217554 TJP1 Pathway Commons Protein-Protein Interactions 1.0 null macromolecular complex COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 SRRM1 Pathway Commons Protein-Protein Interactions 1.0 null CRKL Pathway Commons Protein-Protein Interactions 1.0 null imatinib_homo sapiens_gpl96_gds3045 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null ARPC3 Pathway Commons Protein-Protein Interactions 1.0 null NOP56 Pathway Commons Protein-Protein Interactions 1.0 null RPL8 Pathway Commons Protein-Protein Interactions 1.0 null BL5990 (ZNF592) NURSA Protein Complexes 1.0 null H3K4me3_bone marrow_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null SBC-1 GDSC Cell Line Gene Expression Profiles -1.0 -1.74206 H3K27ac_Duodenum Smooth Muscle Roadmap Epigenomics Histone Modification Site Profiles 1.0 null posterior hypothalamic area, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.1922 IM-95M Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.865957 FOXL1 JASPAR Predicted Transcription Factor Targets 1.0 null Cell Transformation, Neoplastic CTD Gene-Disease Associations 1.0 1.0204 GTEX-RU72-2926-SM-2TF66 GTEx Tissue Sample Gene Expression Profiles 1.0 1.00133 POLR2AphosphoS5_HCT116_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CORL105 CCLE Cell Line Gene Expression Profiles -1.0 -1.5804 deferasirox_homo sapiens_gpl570_gds3558 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null SRRM2 Pathway Commons Protein-Protein Interactions 1.0 null YBX1 Pathway Commons Protein-Protein Interactions 1.0 null STAT5A_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null cell part LOCATE Predicted Protein Localization Annotations 1.0 null H4K20me1_HeLa-S3_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null SF3A3 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me2_B cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null PAFAH1B2 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me1_placenta_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_MCF 10A_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null LDHB Pathway Commons Protein-Protein Interactions 1.0 null H3K4me1_bone marrow_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null KMS-12-BM Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.00815 TYMS Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_epithelial cell of proximal tubule_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null SEC23B Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_brain_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null KRT10 Pathway Commons Protein-Protein Interactions 1.0 null CTCF_GM12870_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XQ3S-0626-SM-4BOOB GTEx Tissue Sample Gene Expression Profiles 1.0 0.900835 GTEX-XBEC-1526-SM-4AT68 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.33739 647-V GDSC Cell Line Gene Expression Profiles -1.0 -1.68041 H3K4me3_fibroblast of lung_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null ELK1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-Q2AI-0008-SM-48U2H GTEx Tissue Sample Gene Expression Profiles 1.0 1.54516 terete nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.25906 Sarcoma_SARC_TCGA-X6-A7W8-01A-21R-A355-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HUPT3 CCLE Cell Line Gene CNV Profiles -1.0 -1.37365 Skin Cutaneous Melanoma_SKCM_TCGA-EB-A5SG-06A-11R-A311-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PPT1 Pathway Commons Protein-Protein Interactions 1.0 null PKP3 Pathway Commons Protein-Protein Interactions 1.0 null TOP1 Pathway Commons Protein-Protein Interactions 1.0 null epithelium TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.050845 primary visual cortex (striate cortex, area V1/17)_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.06595 RARS Pathway Commons Protein-Protein Interactions 1.0 null H3K27ac_A549_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null paraventricular nucleus of the hypothalamus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.17105 NELFE_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MRPL11 Pathway Commons Protein-Protein Interactions 1.0 null SIN3A_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null U-2932 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.973431 Liver hepatocellular carcinoma_LIHC_TCGA-CC-A7IE-01A-21R-A38B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2A_GM10847_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-NPJ8-0011-R6a-SM-2HMKB GTEx Tissue Sample Gene Expression Profiles 1.0 0.870005 superficial stratum of r2BI Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.79383 heart ProteomicsDB Cell Type and Tissue Protein Expression Profiles -1.0 -1.57139 Lung squamous cell carcinoma_LUSC_TCGA-56-7221-01A-11R-2045-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SNRPG Pathway Commons Protein-Protein Interactions 1.0 null HCC2185 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 1.18073 NCI-H1838 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.5593 H3K4me3_HL-60_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null SMCHD1 Pathway Commons Protein-Protein Interactions 1.0 null Muscular Dystrophy_Muscle - Striated (Skeletal) (MMHCC)_GSE2629 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 1.47239 HSPE1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-WL46-0011-R6A-SM-3LK6X GTEx Tissue Sample Gene Expression Profiles 1.0 1.02123 SRSF5 Pathway Commons Protein-Protein Interactions 1.0 null WM-115 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles 1.0 null GTEX-UPK5-1426-SM-4JBHH GTEx Tissue Sample Gene Expression Profiles -1.0 -1.34381 GTEX-WFON-0005-SM-3NMC9 GTEx Tissue Sample Gene Expression Profiles -1.0 -2.00187 lateral hypothalamic area, anterior part Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.78879 SK-MEL-2 COSMIC Cell Line Gene CNV Profiles 1.0 4.51153 HNRNPUL2 Pathway Commons Protein-Protein Interactions 1.0 null Central amygdalar nucleus, lateral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.18612 EIF5B Pathway Commons Protein-Protein Interactions 1.0 null NUFIP1 Pathway Commons Protein-Protein Interactions 1.0 null dentate gyrus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.996303 ILF2 Pathway Commons Protein-Protein Interactions 1.0 null Perturb_8634_KO_Htr6_SRP223109 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -9.64603 H3K4me2_endothelial cell of umbilical vein_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Perturb_12569_KD_Sufu_SRP194252 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -20.0 SIN3A_HCT116_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null tonsil HPA Tissue Protein Expression Profiles -1.0 -0.935947 RBM42 Pathway Commons Protein-Protein Interactions 1.0 null CTCF_fibroblast of gingiva_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null antigen GeneRIF Biological Term Annotations 1.0 null non-membrane-bounded organelle GO Cellular Component Annotations 2015 1.0 null PRPS2 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_Mesenchymal Stem Cell Derived Adipocyte Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null SCAP Pathway Commons Protein-Protein Interactions 1.0 null Perturb_8922_KD_ARID1A_SRP192521 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -1.86901 Perturb_1207_KO_Sp4/Sp1_SRP302435 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 20.0 H3K27ac_astrocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null integument TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.53602 rna splicing, via transesterification reactions GO Biological Process Annotations 2015 1.0 null RPS14 Pathway Commons Protein-Protein Interactions 1.0 null DOHH2 CCLE Cell Line Gene Expression Profiles 1.0 1.40679 AP2S1 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me1_skeletal muscle myoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XLM4-2926-SM-4AT59 GTEx Tissue Sample Gene Expression Profiles 1.0 0.826923 Basolateral amygdalar nucleus, anterior part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.13963 primary somatosensory cortex (area S1, areas 3,1,2)_37 pcw_M_263195015 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.846075 PML_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null MRPS14 Pathway Commons Protein-Protein Interactions 1.0 null Pancreatic adenocarcinoma_PAAD_TCGA-3A-A9I5-01A-11R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung adenocarcinoma_LUAD_TCGA-78-8662-01A-11R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null RUVBL2 Hub Proteins Protein-Protein Interactions 1.0 null PABPC1 Pathway Commons Protein-Protein Interactions 1.0 null amygdaloid complex_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.26154 COR-L88 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.72481 H3K4me1_spleen_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null HCC1500 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.04998 Alpha-Hydroxy-Beta-Phenyl-Propionic Acid DrugBank Drug Targets 1.0 null DDX54 Pathway Commons Protein-Protein Interactions 1.0 null myb_16205643_primary_monocytes_gof_human_gpl570_gse2816 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations -1.0 -1.1766 SW1463 GDSC Cell Line Gene Expression Profiles -1.0 -1.48534 posterior (caudal) superior temporal cortex (area 22c)_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.18853 Anteroventral preoptic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.03366 ZNF384_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null bodies GeneRIF Biological Term Annotations 1.0 null H3K36me3_MEL cell line_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null r9 part of the inferior olive Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.0323 H3K4me3_liver_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null tissues, cell types and enzyme sources TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.051238 protein complex GO Cellular Component Annotations 2015 1.0 null YY1 JASPAR Predicted Transcription Factor Targets 1.0 null Rectum adenocarcinoma_READ_TCGA-F5-6813-01A-11R-1830-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BL2519 (VCP) NURSA Protein Complexes 1.0 null STAT1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null OAW28 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.36998 FOXP2 ENCODE Transcription Factor Targets 1.0 null BRCA1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Edinger-Westphal nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.57981 17683518-193GeneTable GeneSigDB Published Gene Signatures 1.0 null LRIF1 Hub Proteins Protein-Protein Interactions 1.0 null H3K4me3_placenta_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Kidney Chromophobe_KICH_TCGA-KN-8421-01A-11R-2315-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TRIM28 ENCODE Transcription Factor Targets 1.0 null uterus TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.06893 Leber congenital amaurosis_Retina_GSE3249 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 1.72404 NUDC Pathway Commons Protein-Protein Interactions 1.0 null POLR2AphosphoS2_myocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-T5JC-0011-R4A-SM-32PLT GTEx Tissue Sample Gene Expression Profiles 1.0 1.35251 RPL32 Pathway Commons Protein-Protein Interactions 1.0 null parietal neocortex_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.8655 TTC9C Pathway Commons Protein-Protein Interactions 1.0 null periventricular stratum of r7Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.43846 BL4214 (THRAP3) NURSA Protein Complexes 1.0 null NDUFV2 Pathway Commons Protein-Protein Interactions 1.0 null ACTR2 Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_GM12891_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SIN3A_H1-hESC_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-FS-A4F4-06A-12R-A266-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-CC-A7II-01A-11R-A33J-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PCNA Pathway Commons Protein-Protein Interactions 1.0 null GTEX-XBEC-0006-SM-4AT5T GTEx Tissue Sample Gene Expression Profiles -1.0 -1.42101 SGPL1 Pathway Commons Protein-Protein Interactions 1.0 null inner SZ in midlateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.6587 H3K4me1_Brain Anterior Caudate Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GTEX-XPVG-0326-SM-4B653 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.8587 AP2A2 Pathway Commons Protein-Protein Interactions 1.0 null VTN Pathway Commons Protein-Protein Interactions 1.0 null ventrolateral prefrontal cortex_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.07836 rna binding GO Molecular Function Annotations 2015 1.0 null GTEX-OOBK-0005-SM-2YUMG GTEx Tissue Sample Gene Expression Profiles -1.0 -0.91079 Neoplasms, Experimental CTD Gene-Disease Associations 1.0 1.14098 CAL-148 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.30279 GTEX-NPJ7-0011-R6a-SM-2I3G7 GTEx Tissue Sample Gene Expression Profiles 1.0 0.913879 EDC4 Pathway Commons Protein-Protein Interactions 1.0 null posterior (caudal) superior temporal cortex (area 22c)_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.860125 H2AFZ_keratinocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-OIZI-0526-SM-2XCEG GTEx Tissue Sample Gene Expression Profiles -1.0 -0.997029 GTEX-X4XX-3026-SM-3NMB2 GTEx Tissue Sample Gene Expression Profiles 1.0 1.15807 Lung squamous cell carcinoma_LUSC_TCGA-56-8629-01A-11R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-T5JC-2526-SM-4DM6G GTEx Tissue Sample Gene Expression Profiles 1.0 1.10727 Brain Lower Grade Glioma_LGG_TCGA-QH-A6CZ-01A-11R-A32Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ventrolateral prefrontal cortex_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.10822 SW 1573 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.46492 EBNA1BP2 Pathway Commons Protein-Protein Interactions 1.0 null habenula (old epithalamus) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.36122 RPS6 Pathway Commons Protein-Protein Interactions 1.0 null ventrolateral prefrontal cortex_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.23999 H3K4me3_HL-60_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null DHX30 Pathway Commons Protein-Protein Interactions 1.0 null ESYT2 Pathway Commons Protein-Protein Interactions 1.0 null periventricular stratum of r8Ve Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.12482 Skin Cutaneous Melanoma_SKCM_TCGA-EB-A553-01A-12R-A27Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_fibroblast of skin of abdomen_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null SK-MEL-28 GDSC Cell Line Gene Expression Profiles 1.0 1.54636 POLR1A Pathway Commons Protein-Protein Interactions 1.0 null KELLY Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.08904 GTEX-POYW-0008-SM-48TE4 GTEx Tissue Sample Gene Expression Profiles 1.0 0.922921 YY1_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-QEG5-0006-SM-2I5FZ GTEx Tissue Sample Gene Expression Profiles -1.0 -0.946863 H3K4me3_fibroblast of lung_hg19_5 ENCODE Histone Modification Site Profiles 1.0 null MAFK_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null nucleoplasm GO Cellular Component Annotations 2015 1.0 null CTCF_thymus_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_GM12875_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RAD17 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-QVJO-1426-SM-2S1QY GTEx Tissue Sample Gene Expression Profiles 1.0 1.3651 Sarcoma_SARC_TCGA-FX-A48G-01A-11R-A24X-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CL-11 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.24899 H3K4me3_Penis Foreskin Keratinocyte Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null inherited metabolic disorder DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.050736 RAB5C Pathway Commons Protein-Protein Interactions 1.0 null GTEX-T2IS-0011-R11A-SM-32QPC GTEx Tissue Sample Gene Expression Profiles 1.0 1.50511 NCI-H2810 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.79314 MELHO CCLE Cell Line Gene Expression Profiles 1.0 2.09812 CBX3 ENCODE Transcription Factor Targets 1.0 null H3K4me3_fibroblast of pedal digit skin_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null MAFK_IMR-90_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XXEK-0005-SM-4BRWJ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.21283 CPT1A Pathway Commons Protein-Protein Interactions 1.0 null HCC1395 CCLE Cell Line Gene Expression Profiles 1.0 1.48871 Acute Myeloid Leukemia_LAML_TCGA-AB-2941-03A-01T-0740-13 TCGA Signatures of Differentially Expressed Genes for Tumors -1.0 null YBX3 Pathway Commons Protein-Protein Interactions 1.0 null RSU1 Pathway Commons Protein-Protein Interactions 1.0 null PDCD5 Pathway Commons Protein-Protein Interactions 1.0 null tonsil HPA Tissue Gene Expression Profiles 1.0 1.10655 H3K4me1_mononuclear cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null cellular metabolic process GO Biological Process Annotations 2015 1.0 null RAB11B Pathway Commons Protein-Protein Interactions 1.0 null PTPLAD1 Pathway Commons Protein-Protein Interactions 1.0 null VDR ChEA Transcription Factor Targets 1.0 null central glial substance Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -2.35777 ELF1_HCT116_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BL9238 (GREB1) NURSA Protein Complexes 1.0 null BL653 (CUL7) NURSA Protein Complexes 1.0 null gonad TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.0758 posteroventral (inferior) parietal cortex_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.02378 TRIM28 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_HeLa-S3_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null RAE1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-X62O-1626-SM-46MW9 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.914084 H3ac_C2C12_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null MYC_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K36me3_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Primary somatosensory area, barrel field, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.32517 nuclear part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.398975 MRPS27 Pathway Commons Protein-Protein Interactions 1.0 null horizontal nucleus of the diagonal band Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.12223 SIN3A_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_heart_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null DHX38 Pathway Commons Protein-Protein Interactions 1.0 null PUS1 Pathway Commons Protein-Protein Interactions 1.0 null CSTB_KO_GDS5090_199_mouse_Cerebellum GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null GTEX-TMMY-1326-SM-4DXU9 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.93097 GTEX-R55E-0011-R11A-SM-2TC6I GTEx Tissue Sample Gene Expression Profiles 1.0 0.939337 GTEX-WZTO-0011-R4A-SM-3NMC7 GTEx Tissue Sample Gene Expression Profiles 1.0 1.42262 RBM14 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-X585-0011-R8A-SM-46MUX GTEx Tissue Sample Gene Expression Profiles 1.0 4.42475 HCFC1_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAX ENCODE Transcription Factor Targets 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-EB-A3Y6-01A-21R-A239-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SHP-77 GDSC Cell Line Gene Expression Profiles 1.0 1.79517 BL117 (ATR) NURSA Protein Complexes 1.0 null RPS24 Pathway Commons Protein-Protein Interactions 1.0 null E2F6_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GABPA_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_epithelial cell of proximal tubule_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-S7SE-0011-R10A-SM-2XCDF GTEx Tissue Sample Gene Expression Profiles 1.0 1.55536 H3K9ac_ES-Bruce4_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null ATP5H Pathway Commons Protein-Protein Interactions 1.0 null subnuclear GeneRIF Biological Term Annotations 1.0 null FTSJ3 Pathway Commons Protein-Protein Interactions 1.0 null Arcuate hypothalamic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.46812 CSNK2A1 Pathway Commons Protein-Protein Interactions 1.0 null GABPA_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2AphosphoS5_GM12892_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null membrane-bounded organelle LOCATE Curated Protein Localization Annotations 1.0 null Rectum adenocarcinoma_READ_TCGA-EF-5830-01A-01R-1660-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null external granular (germinal) layer of upper rhombic lip Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.08564 CUX1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null paracentral lobule, anterior part, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.24452 U-2 OS Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.32856 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6436-01A-11R-1686-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null RFXAP Pathway Commons Protein-Protein Interactions 1.0 null USP15 Pathway Commons Protein-Protein Interactions 1.0 null intracellular part GO Cellular Component Annotations 2015 1.0 null GOLGA7 Pathway Commons Protein-Protein Interactions 1.0 null BT20 Achilles Cell Line Gene Essentiality Profiles -1.0 -1.48707 core of T-DMH Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.00806 GM2345 BioGPS Cell Line Gene Expression Profiles -1.0 -1.4349 SP1_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null molecular_function GO Molecular Function Annotations 2015 1.0 null C32 CCLE Cell Line Gene CNV Profiles 1.0 1.32906 GTEX-RNOR-0011-R4A-SM-3GAD3 GTEx Tissue Sample Gene Expression Profiles 1.0 1.26267 GTEX-Q2AG-0005-SM-33HBX GTEx Tissue Sample Gene Expression Profiles -1.0 -1.00292 Kidney renal clear cell carcinoma_KIRC_TCGA-B4-5832-01A-11R-1672-07 TCGA Signatures of Differentially Expressed Genes for Tumors -1.0 null NCIH2110 CCLE Cell Line Gene Expression Profiles -1.0 -1.57545 SOX15 Pathway Commons Protein-Protein Interactions 1.0 null BYSL Pathway Commons Protein-Protein Interactions 1.0 null PRPF6 Pathway Commons Protein-Protein Interactions 1.0 null UBTF ENCODE Transcription Factor Targets 1.0 null H3K27ac_embryonic fibroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null PRMT1 Pathway Commons Protein-Protein Interactions 1.0 null TEF-1 MotifMap Predicted Transcription Factor Targets 1.0 null lateral mammillary nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 2.12645 primary auditory cortex (core)_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.4467 striatal amygdala Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.13138 Alexander Disease_CNS - Brain - Olfactory Bulb (MMHCC)_GSE977 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -2.40659 cerebellar cortex_19 yrs_F_12832 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.0315 GTEX-X261-0011-R11A-SM-4E3JY GTEx Tissue Sample Gene Expression Profiles 1.0 1.47159 TK-10 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.930351 POLR2I Pathway Commons Protein-Protein Interactions 1.0 null GTEX-XGQ4-0226-SM-4GIDS GTEx Tissue Sample Gene Expression Profiles -1.0 -0.953983 Lung adenocarcinoma_LUAD_TCGA-73-4677-01A-01R-1206-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Nervous System Diseases CTD Gene-Disease Associations 1.0 1.32993 17952126-SuppTable2 GeneSigDB Published Gene Signatures 1.0 null a549 HPA Cell Line Gene Expression Profiles -1.0 -1.17441 HNRNPA3 Pathway Commons Protein-Protein Interactions 1.0 null VCAM1 Pathway Commons Protein-Protein Interactions 1.0 null RCOR1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null intracellular part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.050478 HCC1428 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.10816 GTEX-N7MT-0011-R6a-SM-2I3G3 GTEx Tissue Sample Gene Expression Profiles 1.0 1.07524 Acute pancreatitis_Pancreas_GSE3644 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -0.971806 H3K4me1_myotube_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null head of caudate nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.41469 dorsal part of alar p2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.36273 SIN3A_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HELA Roadmap Epigenomics Cell and Tissue Gene Expression Profiles 1.0 1.07981 IRF1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null dorsal cortical nucleus of inferior colliculus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.52958 CTCF_keratinocyte_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null 19190164-Table1 GeneSigDB Published Gene Signatures 1.0 null H3K27ac_CD4 Naive Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null T98G Achilles Cell Line Gene Essentiality Profiles 1.0 1.89131 E2F6_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_brain microvascular endothelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null male reproductive gland TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.53602 primary motor-sensory cortex (samples)_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.99284 dexamethasone_homo sapiens_gpl4133_gse42619 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null SEC31A Pathway Commons Protein-Protein Interactions 1.0 null dorsal lateral geniculate nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.36379 Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7JS-01A-11R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null testis_7d HPA Tissue Sample Gene Expression Profiles 1.0 1.10015 HSD17B4 Pathway Commons Protein-Protein Interactions 1.0 null ZNF143_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null 17894856-SuppList2 GeneSigDB Published Gene Signatures 1.0 null GTEX-QVJO-0011-R2A-SM-2S1QK GTEx Tissue Sample Gene Expression Profiles 1.0 0.976705 nucleus GO Cellular Component Annotations 2015 1.0 null H3K4me3_cardiac fibroblast_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XUJ4-0005-SM-4BOQ6 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.61473 H3K27ac_fibroblast of dermis_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-QH-A65X-01A-11R-A32Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MXI1_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null E2F4_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null USF2 ENCODE Transcription Factor Targets 1.0 null mRNA Splicing - Minor Pathway Reactome Pathways 2014 1.0 null H3K4me3_Caco-2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null primary visual cortex (striate cortex, area V1/17)_1 yrs_F_12830 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.828438 GTEX-RU72-1426-SM-46MUF GTEx Tissue Sample Gene Expression Profiles -1.0 -0.937094 POLR2AphosphoS5_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null MCM6 Pathway Commons Protein-Protein Interactions 1.0 null hsa-miR-205 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.880544 cell part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 D-263MG GDSC Cell Line Gene Expression Profiles 1.0 1.53893 GTEX-NL4W-0011-R11A-SM-2I3DW GTEx Tissue Sample Gene Expression Profiles 1.0 2.75322 JUN ENCODE Transcription Factor Targets 1.0 null BMP2K Pathway Commons Protein-Protein Interactions 1.0 null DLD Pathway Commons Protein-Protein Interactions 1.0 null female reproductive system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.053576 GTEX-X5EB-1626-SM-4E3IV GTEx Tissue Sample Gene Expression Profiles -1.0 -0.9376 GABPA_SK-N-SH_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null ELF1_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_fibroblast of gingiva_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HL-60 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.82799 CWC15 Pathway Commons Protein-Protein Interactions 1.0 null female reproductive system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null heterocycle metabolic process GO Biological Process Annotations 2015 1.0 null POLR2A_HeLa-S3_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null embryonic structure TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.052104 Mesothelioma_MESO_TCGA-SC-A6LP-01A-11R-A34F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null medial parabrachial nucleus,right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.24859 POLR2A_K562_hg19_7 ENCODE Transcription Factor Binding Site Profiles 1.0 null EPRS Pathway Commons Protein-Protein Interactions 1.0 null GTEX-X4LF-0006-SM-3NMCO GTEx Tissue Sample Gene Expression Profiles -1.0 -1.27836 ventrolateral prefrontal cortex_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.85582 hsa-miR-4480 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.0155 ACTN4 Pathway Commons Protein-Protein Interactions 1.0 null DDX1 Pathway Commons Protein-Protein Interactions 1.0 null COIL Pathway Commons Protein-Protein Interactions 1.0 null WholeBlood BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.59556 H3K4me1_Brain Mid Frontal Lobe Roadmap Epigenomics Histone Modification Site Profiles 1.0 null small nucleolar ribonucleoprotein complex COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 anterior hypothalamic nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.21313 tail of caudate nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.27076 MAZ_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ATF2_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Prostate adenocarcinoma_PRAD_TCGA-G9-6498-01A-12R-A311-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me1_heart_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null HCC2935 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.943365 PRDM16_DEPLETION_GDS4021_460_mouse_WAT - white adipose tissue (stromal-vascular cells) GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null hsa-miR-4739 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.40969 YY1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null C-33 A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.971124 BCLAF1 ENCODE Transcription Factor Targets 1.0 null Micronuclei, Chromosome-Defective CTD Gene-Disease Associations 1.0 1.3736 Skin Cutaneous Melanoma_SKCM_TCGA-ER-A19C-06A-11R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null organelle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 VCL Pathway Commons Protein-Protein Interactions 1.0 null CHD4 Pathway Commons Protein-Protein Interactions 1.0 null A498 BioGPS Cell Line Gene Expression Profiles -1.0 -1.107 GTEX-U3ZH-1726-SM-3DB79 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.856011 inferior olivary complex, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.41328 H3K4me3_cardiac mesoderm_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null eye and adnexa disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.044466 MYC_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-OXRL-0005-SM-3LK6A GTEx Tissue Sample Gene Expression Profiles -1.0 -2.13079 POLD1 Pathway Commons Protein-Protein Interactions 1.0 null hsa-miR-9 TargetScan Predicted Conserved microRNA Targets 1.0 0.670641 NOL12 Pathway Commons Protein-Protein Interactions 1.0 null 15817677-TableS2a GeneSigDB Published Gene Signatures 1.0 null retinitis pigmentosa DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.632384 CHD1_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_endothelial cell of umbilical vein_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null POU2F2_GM12891_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null r5 part of dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.27298 GTEX-WHSE-0126-SM-3NMBT GTEx Tissue Sample Gene Expression Profiles 1.0 1.04542 GTEX-X3Y1-0006-SM-3P5ZG GTEx Tissue Sample Gene Expression Profiles -1.0 -1.47527 DNMT1 Pathway Commons Protein-Protein Interactions 1.0 null EIF3M Pathway Commons Protein-Protein Interactions 1.0 null intracellular organelle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.046122 STAT1 ENCODE Transcription Factor Targets 1.0 null superficial stratum of THyB-D Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.51313 amygdaloid complex_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.01847 H3K4me3_A549_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null Pancreatic adenocarcinoma_PAAD_TCGA-US-A779-01A-11R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_fibroblast of upper leg skin_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null NCI-H727 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.6235 accumulated GeneRIF Biological Term Annotations 1.0 null GTEX-T6MN-0011-R8A-SM-32QP3 GTEx Tissue Sample Gene Expression Profiles 1.0 1.52419 EW8 CCLE Cell Line Gene Expression Profiles 1.0 1.59098 hsa-miR-1178 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.965816 BRAF_druginhibition_175_GSE42872 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -1.53119 IDI1 Pathway Commons Protein-Protein Interactions 1.0 null GABPA_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null tuberomammillary nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.46528 TAF1_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null mediodorsal nucleus of thalamus_37 pcw_M_263195015 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.13881 GTEX-NL4W-0011-R8a-SM-2I3G4 GTEx Tissue Sample Gene Expression Profiles 1.0 1.58335 Brain Lower Grade Glioma_LGG_TCGA-S9-A7R7-01A-11R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors -1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-A3-3306-01A-01R-0864-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CREB1_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GATA1 ENCODE Transcription Factor Targets 1.0 null GTEX-X585-0011-R6A-SM-46MVJ GTEx Tissue Sample Gene Expression Profiles 1.0 1.76767 DDX50 Pathway Commons Protein-Protein Interactions 1.0 null HDAC1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BL3282 (C7orf27) NURSA Protein Complexes 1.0 null CHD1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-DU-6404-01A-11R-1708-07 TCGA Signatures of Differentially Expressed Genes for Tumors -1.0 null GTF2F1 ENCODE Transcription Factor Targets 1.0 null GTEX-XUW1-0126-SM-4BOOQ GTEx Tissue Sample Gene Expression Profiles 1.0 0.83266 DYNC1H1 Pathway Commons Protein-Protein Interactions 1.0 null UBA52 Pathway Commons Protein-Protein Interactions 1.0 null EIF3B Pathway Commons Protein-Protein Interactions 1.0 null PDCD6 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-SNOS-0926-SM-4DM7A GTEx Tissue Sample Gene Expression Profiles -1.0 -0.870477 cuneate nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.43211 AIFM1 Pathway Commons Protein-Protein Interactions 1.0 null PINX1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-WY7C-0006-SM-3NB3L GTEx Tissue Sample Gene Expression Profiles -1.0 -0.992171 Skin Neoplasms CTD Gene-Disease Associations 1.0 1.06152 H3K27ac_mammary epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_fibroblast of villous mesenchyme_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null dorsolateral prefrontal cortex_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.30877 organelle lumen COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.346071 CTCF_HeLa-S3_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null REST_myocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ITGAV Pathway Commons Protein-Protein Interactions 1.0 null ZC3HAV1 Pathway Commons Protein-Protein Interactions 1.0 null FAU Pathway Commons Protein-Protein Interactions 1.0 null H3K36me3_NT2-D1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null dorsolateral prefrontal cortex_19 pcw_F_12885 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.980869 JEKO1 CCLE Cell Line Gene CNV Profiles 1.0 1.35216 H3K9ac_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me1_Brain Hippocampus Middle Roadmap Epigenomics Histone Modification Site Profiles 1.0 null BL3800 (PALB2) NURSA Protein Complexes 1.0 null KRT9 Pathway Commons Protein-Protein Interactions 1.0 null testis BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -1.81272 Prenatal Exposure Delayed Effects CTD Gene-Disease Associations 1.0 1.74099 H2AFZ_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_K562_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null CAPZB Pathway Commons Protein-Protein Interactions 1.0 null GTPBP4 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-Q2AG-1126-SM-48U1P GTEx Tissue Sample Gene Expression Profiles -1.0 -1.18616 H3K79me2_heart_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Folium-tuber vermis (VII), granular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.70726 TCF12_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null MYBL2 ENCODE Transcription Factor Targets 1.0 null PPP1CC Pathway Commons Protein-Protein Interactions 1.0 null SRPK3 Pathway Commons Protein-Protein Interactions 1.0 null genetic disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.059179 NCDN Pathway Commons Protein-Protein Interactions 1.0 null occipital pole, left, inferior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.02263 H3K4me3_HepG2_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null BCL3_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAFK_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Learning Disorders CTD Gene-Disease Associations 1.0 1.16633 NECAP2 Pathway Commons Protein-Protein Interactions 1.0 null CAL148 CCLE Cell Line Gene CNV Profiles -1.0 -2.09167 CREB1_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K9ac_GM12878_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-Q2AG-0011-R3A-SM-2HMJ9 GTEx Tissue Sample Gene Expression Profiles 1.0 1.64163 POLR2AphosphoS5_U-87 MG_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null DDX6 Pathway Commons Protein-Protein Interactions 1.0 null H3K27ac_kidney_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null ribonucleoprotein complex GO Cellular Component Annotations 2015 1.0 null RPS29 Pathway Commons Protein-Protein Interactions 1.0 null ChIP_SOX2_18692474 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null TAF15 Pathway Commons Protein-Protein Interactions 1.0 null PRPF31 Pathway Commons Protein-Protein Interactions 1.0 null intracellular organelle part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.055178 Sarcoma_SARC_TCGA-DX-A7ER-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null LB996-RCC GDSC Cell Line Gene Expression Profiles -1.0 -2.06273 Bladder Urothelial Carcinoma_BLCA_TCGA-KQ-A41N-01A-11R-A33J-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MAFK_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K9ac_endothelial cell of umbilical vein_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me1_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Uterine leiomyoma_Uterus_GSE2724 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 2.01404 superficial stratum of r10BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.14992 CTCF_fibroblast of pulmonary artery_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_CH12.LX_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null CTCF_choroid plexus epithelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_NB4_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null nitrogen compound metabolic process GO Biological Process Annotations 2015 1.0 null CREB1_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null RPLP2 Pathway Commons Protein-Protein Interactions 1.0 null SUPT16H Pathway Commons Protein-Protein Interactions 1.0 null MRPS16 Pathway Commons Protein-Protein Interactions 1.0 null Prostate adenocarcinoma_PRAD_TCGA-G9-6369-01A-21R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Mesothelioma_MESO_TCGA-SH-A7BH-01A-11R-A34F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Periventricular hypothalamic nucleus, posterior part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.59486 TFAM Pathway Commons Protein-Protein Interactions 1.0 null nucleolar part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.532488 level GeneRIF Biological Term Annotations 1.0 null Cortical amygdalar area, posterior part, medial zone, layer 3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.16485 pallidal islands of Calleja Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.16763 nmr GeneRIF Biological Term Annotations 1.0 null GTEX-S7PM-0426-SM-3NM91 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.851269 r5 part of ventral lateral lemniscal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.472 GTEX-OOBJ-0826-SM-3NB2K GTEx Tissue Sample Gene Expression Profiles -1.0 -1.56271 GTEX-T6MN-0005-SM-32PLJ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.34687 PFEIFFER Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.9801 accumulation GeneRIF Biological Term Annotations 1.0 null ZNF384_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SARS Pathway Commons Protein-Protein Interactions 1.0 null Crus 2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.02846 EEF1E1 Pathway Commons Protein-Protein Interactions 1.0 null BRCA1_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null inferolateral temporal cortex (area TEv, area 20)_13 pcw_M_12820 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.27715 conformational GeneRIF Biological Term Annotations 1.0 null POLR2A_H1-hESC_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null COLO 678 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.01288 Lung adenocarcinoma_LUAD_TCGA-78-7166-01A-12R-2066-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null COPB1 Pathway Commons Protein-Protein Interactions 1.0 null HOXC9 ChEA Transcription Factor Targets 1.0 null KRT5 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_Brain Hippocampus Middle Roadmap Epigenomics Histone Modification Site Profiles 1.0 null A4FUK CCLE Cell Line Gene Expression Profiles 1.0 1.71961 nucleoplasm COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 TAF1_neural cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-DU-7007-01A-11R-2027-07 TCGA Signatures of Differentially Expressed Genes for Tumors -1.0 null SNU410 CCLE Cell Line Gene CNV Profiles 1.0 1.62051 Brain Lower Grade Glioma_LGG_TCGA-WY-A859-01A-12R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null spliceosomal complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.567585 FGFR3_KD_GDS4454_78_human_RT112 GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null intracellular organelle GO Cellular Component Annotations 2015 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-AK-3427-01A-01R-0864-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-PSDG-0005-SM-3GADC GTEx Tissue Sample Gene Expression Profiles -1.0 -0.92373 KDM5A_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SYF2 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_K562_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-PWCY-2226-SM-2S1OP GTEx Tissue Sample Gene Expression Profiles -1.0 -0.986865 primary somatosensory cortex (area S1, areas 3,1,2)_18 yrs_M_12984 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -2.35262 intracellular part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 hsa-miR-1321 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.2992 layer II of area 35c Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.33903 EZH2_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27ac_H1-hESC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null KHSRP Pathway Commons Protein-Protein Interactions 1.0 null hypoglossal nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.12862 POLR2AphosphoS5_G1E_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_bone marrow_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TBP_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-OHPM-0006-SM-2HMKU GTEx Tissue Sample Gene Expression Profiles -1.0 -1.64347 MAZ ENCODE Transcription Factor Targets 1.0 null cellular aromatic compound metabolic process GO Biological Process Annotations 2015 1.0 null GTEX-O5YT-0007-SM-32PK7 GTEx Tissue Sample Gene Expression Profiles -1.0 -2.20328 ATP5F1 Pathway Commons Protein-Protein Interactions 1.0 null POLR2AphosphoS2_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H2AFZ_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-Q734-0326-SM-48U15 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.04892 occipital pole, left, superior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.868599 KRT31 Pathway Commons Protein-Protein Interactions 1.0 null EP300_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_fibroblast of lung_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-SUCS-0006-SM-4DM59 GTEx Tissue Sample Gene Expression Profiles -1.0 -2.3554 organelle part LOCATE Curated Protein Localization Annotations 1.0 null THRAP3 Pathway Commons Protein-Protein Interactions 1.0 null MOLP2 CCLE Cell Line Gene Expression Profiles 1.0 1.51931 Prostate adenocarcinoma_PRAD_TCGA-QU-A6IL-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null tissues, cell types and enzyme sources TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null Uterus BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -2.02283 H3K4me3_MEL cell line_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null r7 part of the posteroventral cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.33224 GABPA_HL-60_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_H1 Derived Mesenchymal Stem Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null ECD Pathway Commons Protein-Protein Interactions 1.0 null MYH9 Pathway Commons Protein-Protein Interactions 1.0 null POLR2AphosphoS5_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MRPL48 Pathway Commons Protein-Protein Interactions 1.0 null EBF1 ENCODE Transcription Factor Targets 1.0 null GTEX-RM2N-0006-SM-2TF5H GTEx Tissue Sample Gene Expression Profiles -1.0 -1.48968 Medial habenula Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.13379 H3K27ac_HCT116_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null superficial stratum of THyB-I Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.59801 MAFK_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null WDR18 Pathway Commons Protein-Protein Interactions 1.0 null non-membrane-bounded organelle LOCATE Curated Protein Localization Annotations 1.0 null vitamin c_mus musculus_gpl1261_gse37676 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null ELF1_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CPSF2 Pathway Commons Protein-Protein Interactions 1.0 null SNRNP200 Pathway Commons Protein-Protein Interactions 1.0 null C32TG Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.0727 CAND1 Pathway Commons Protein-Protein Interactions 1.0 null USF1_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CCT7 Pathway Commons Protein-Protein Interactions 1.0 null RRP12 Pathway Commons Protein-Protein Interactions 1.0 null MYC_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null superficial stratum of THyB-V Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.80139 GTEX-Q2AG-2926-SM-2HMJ3 GTEx Tissue Sample Gene Expression Profiles 1.0 1.09273 limitans nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.04675 CTCF_B cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null organism form TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.055245 H3K4me3_Panc1_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null FOS_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_8602_KO_Mir132_SRP064164 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -16.502 CDC42 Pathway Commons Protein-Protein Interactions 1.0 null H3K9ac_heart_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null CTCF_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RRP1B Pathway Commons Protein-Protein Interactions 1.0 null MDN1 Pathway Commons Protein-Protein Interactions 1.0 null DRG1 Pathway Commons Protein-Protein Interactions 1.0 null PDLIM5 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-R55E-0011-R8A-SM-2TC66 GTEx Tissue Sample Gene Expression Profiles 1.0 0.966604 H3K4me1_HeLa-S3_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null CCT3 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-R53T-0426-SM-48FEM GTEx Tissue Sample Gene Expression Profiles -1.0 -0.995746 GTEX-TKQ1-0006-SM-33HBI GTEx Tissue Sample Gene Expression Profiles -1.0 -1.19541 BOP1 Pathway Commons Protein-Protein Interactions 1.0 null primary motor cortex (area M1, area 4)_13 pcw_M_12820 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.900285 primary auditory cortex (core)_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 2.37462 NHP2 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-S3XE-0006-SM-3K2AA GTEx Tissue Sample Gene Expression Profiles -1.0 -1.42481 GTEX-WH7G-0005-SM-3NMBX GTEx Tissue Sample Gene Expression Profiles -1.0 -1.86925 Fetal Resorption CTD Gene-Disease Associations 1.0 1.3228 CTCF_fibroblast of lung_hg19_6 ENCODE Transcription Factor Binding Site Profiles 1.0 null MEL-HO Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.15869 lung ProteomicsDB Cell Type and Tissue Protein Expression Profiles -1.0 -0.867051 GABPA_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2868-03A-01T-0736-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Disease Models, Animal CTD Gene-Disease Associations 1.0 1.12805 GMPS Pathway Commons Protein-Protein Interactions 1.0 null Insulin Resistance CTD Gene-Disease Associations 1.0 1.08055 NUDT21 Pathway Commons Protein-Protein Interactions 1.0 null ABCE1 Pathway Commons Protein-Protein Interactions 1.0 null RUVBL1 Pathway Commons Protein-Protein Interactions 1.0 null Lung adenocarcinoma_LUAD_TCGA-MP-A4TK-01A-11R-A24X-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HPAC Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.8591 POLR2A Pathway Commons Protein-Protein Interactions 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-BB-7870-01A-11R-2232-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null DOHH-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.941526 eye TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.070308 H2AFZ_myotube_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GABPA_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null RPL6 Pathway Commons Protein-Protein Interactions 1.0 null GTF2F1_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RPS12 Pathway Commons Protein-Protein Interactions 1.0 null SMC3 ENCODE Transcription Factor Targets 1.0 null SMAP2 Pathway Commons Protein-Protein Interactions 1.0 null BL3007 (RMI1) NURSA Protein Complexes 1.0 null POLR2A_K562_hg19_9 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_HCT116_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null EFTUD2 Pathway Commons Protein-Protein Interactions 1.0 null TRA2B Pathway Commons Protein-Protein Interactions 1.0 null ELF1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null lymph node HPA Tissue Protein Expression Profiles -1.0 -0.935947 TPBG Pathway Commons Protein-Protein Interactions 1.0 null intermediate stratum of THyB-I Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.1992 POLR2A_GM12892_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null A-CA-04-2009(H1N1)_4day-RIPK3KO_None_GSE51526 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 1.57421 GTEX-SNOS-0006-SM-32PLH GTEx Tissue Sample Gene Expression Profiles -1.0 -1.50277 ventrolateral prefrontal cortex_35 pcw_F_12295 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.48371 CHST1 Pathway Commons Protein-Protein Interactions 1.0 null nucleolus COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 NR2F2 ENCODE Transcription Factor Targets 1.0 null SIN3A ENCODE Transcription Factor Targets 1.0 null primary motor cortex (area M1, area 4)_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.84305 17683518-813GeneTable GeneSigDB Published Gene Signatures 1.0 null EEF1B2 Pathway Commons Protein-Protein Interactions 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-EB-A4OY-01A-11R-A266-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2A_GM18951_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null KMS26 CCLE Cell Line Gene Expression Profiles 1.0 1.50598 H3K4me1_liver_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null placenta TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 GTEX-S4P3-0006-SM-3K2AW GTEx Tissue Sample Gene Expression Profiles -1.0 -1.69523 GTEX-XLM4-3026-SM-4AT6L GTEx Tissue Sample Gene Expression Profiles 1.0 0.99442 CAL51 Achilles Cell Line Gene Essentiality Profiles 1.0 1.43463 HCT 116 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.88632 GTEX-NPJ7-2926-SM-3MJGQ GTEx Tissue Sample Gene Expression Profiles 1.0 1.22468 H3K27ac_iPS DF 19.11 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Prostate adenocarcinoma_PRAD_TCGA-G9-6496-01A-11R-1789-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null dorsolateral prefrontal cortex_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.15556 RUNX3 ENCODE Transcription Factor Targets 1.0 null TOX4 Pathway Commons Protein-Protein Interactions 1.0 null PML_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TBP_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null upper (rostral) rhombic lip_8 pcw_M_13058 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.18175 inner SZ in posterior parahippocampal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.49438 GTEX-WL46-0011-R3A-SM-3TW8E GTEx Tissue Sample Gene Expression Profiles 1.0 2.40977 BL4577 (USP47) NURSA Protein Complexes 1.0 null BOLA2 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-X585-3026-SM-46MWF GTEx Tissue Sample Gene Expression Profiles 1.0 1.35626 PES1 Pathway Commons Protein-Protein Interactions 1.0 null PUROMYCIN DrugBank Drug Targets 1.0 null Brain Lower Grade Glioma_LGG_TCGA-RY-A83Z-01A-11R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null alimentary canal TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.0758 arcuate nucleus of the hypothalamus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 2.78979 specifically GeneRIF Biological Term Annotations 1.0 null primary motor cortex (area M1, area 4)_11 yrs_F_12289 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.66759 nucleolus LOCATE Curated Protein Localization Annotations 1.0 null H3K4me3_CH12.LX_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null Neurotoxicity Syndromes CTD Gene-Disease Associations 1.0 1.17728 16597596-TableS3-4 GeneSigDB Published Gene Signatures 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5702-01A-11R-1541-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-PSDG-0008-SM-48TE5 GTEx Tissue Sample Gene Expression Profiles 1.0 0.960583 hsa-miR-513b TargetScan Predicted Nonconserved microRNA Targets 1.0 0.965816 HCC1569 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.24014 EWSR1 Pathway Commons Protein-Protein Interactions 1.0 null ChIP_DMAP1_20946988 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null Prostate adenocarcinoma_PRAD_TCGA-KK-A7AW-01A-11R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null M059K Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.995582 TFIP11 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_B cell_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null gata1_15860665_megakaryocytes_lof_mouse_gpl1261_gds1245 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.416173 imatinib_homo sapiens_gpl96_gds3042 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null AAR2 Pathway Commons Protein-Protein Interactions 1.0 null H3K9ac_Brain Cingulate Gyrus Roadmap Epigenomics Histone Modification Site Profiles 1.0 null POLR2AphosphoS5_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K9ac_Adult Kidney Roadmap Epigenomics Histone Modification Site Profiles 1.0 null H3K4me3_cardiac muscle cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null HDAC6 ENCODE Transcription Factor Targets 1.0 null SNRNP40 Pathway Commons Protein-Protein Interactions 1.0 null FLNA Pathway Commons Protein-Protein Interactions 1.0 null POLR2C Pathway Commons Protein-Protein Interactions 1.0 null IMPDH2 Pathway Commons Protein-Protein Interactions 1.0 null UBR4 Pathway Commons Protein-Protein Interactions 1.0 null Non-alcoholic Fatty Liver Disease CTD Gene-Disease Associations 1.0 1.10872 FADU Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.45342 Skin Cutaneous Melanoma_SKCM_TCGA-BF-A1PU-01A-11R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZC3H15 Pathway Commons Protein-Protein Interactions 1.0 null primary motor cortex (area M1, area 4)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.853532 MAX_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WYJK-0005-SM-3NMA1 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.95553 DMS 454 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.90162 RPS7 Pathway Commons Protein-Protein Interactions 1.0 null Adrenocortical carcinoma_ACC_TCGA-OR-A5L9-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BL437 (NCOA2) NURSA Protein Complexes 1.0 null IARS Pathway Commons Protein-Protein Interactions 1.0 null MKN-7 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.843773 RRP9 Pathway Commons Protein-Protein Interactions 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5109-01A-02R-1420-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SPI1_GM12891_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RAC1 Pathway Commons Protein-Protein Interactions 1.0 null r1 part of lateral pontine nuclei Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.31878 HCC364 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.827697 BL3509 (KDM4A) NURSA Protein Complexes 1.0 null H3K4me1_astrocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null YWHAQ Pathway Commons Protein-Protein Interactions 1.0 null EGR1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Preeclampsia_Placenta_GSE4707 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 1.67363 ZMIZ1_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_fibroblast of villous mesenchyme_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_GM12878_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null MYC-19079543-MESC-mouse ChEA Transcription Factor Binding Site Profiles 1.0 null SAP30_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WFJO-0002-SM-3P61X GTEx Tissue Sample Gene Expression Profiles 1.0 0.830115 AURKB_knockdown_92_GSE27869 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -2.11419 IZ in primary somatosensory cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.914068 ELF1 ENCODE Transcription Factor Targets 1.0 null CPSF1 Pathway Commons Protein-Protein Interactions 1.0 null FAM120A Pathway Commons Protein-Protein Interactions 1.0 null IQGAP1 Pathway Commons Protein-Protein Interactions 1.0 null PRDX6 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-XLM4-0011-R10A-SM-4AT5P GTEx Tissue Sample Gene Expression Profiles 1.0 1.43483 H3K9ac_Brain Mid Frontal Lobe Roadmap Epigenomics Histone Modification Site Profiles 1.0 null APOE Pathway Commons Protein-Protein Interactions 1.0 null LNZ308 Achilles Cell Line Gene Essentiality Profiles 1.0 1.26666 SNRNP70 Pathway Commons Protein-Protein Interactions 1.0 null intermediate part of THyB Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.08291 POLR2A_GM18505_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-OXRP-0006-SM-2I3FN GTEx Tissue Sample Gene Expression Profiles -1.0 -1.87416 MBD4_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SNU475 CCLE Cell Line Gene Expression Profiles -1.0 -2.24228 RPL22 Pathway Commons Protein-Protein Interactions 1.0 null Entorhinal area, medial part, ventral zone, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.62162 Ribosomal protein L7Ae/L30e/S12e/Gadd45 InterPro Predicted Protein Domain Annotations 1.0 null KDM5B ENCODE Transcription Factor Targets 1.0 null COPA Pathway Commons Protein-Protein Interactions 1.0 null estradiol_mus musculus_gpl81_gse1839 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null ChIP_MYC_18555785 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null Lung adenocarcinoma_LUAD_TCGA-49-4507-01A-01R-1206-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null G3BP1 Pathway Commons Protein-Protein Interactions 1.0 null H3K79me3_C2C12_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-WFG7-0005-SM-3GIKM GTEx Tissue Sample Gene Expression Profiles -1.0 -1.13598 E2F6_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney Chromophobe_KICH_TCGA-KM-8438-01A-11R-2315-07 TCGA Signatures of Differentially Expressed Genes for Tumors -1.0 null HNRNPA1 Pathway Commons Protein-Protein Interactions 1.0 null MTA3_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null HSF1_KD_GDS1733_752_human_HeLa cells - 2 Hour by siHSF1_1 GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null Ribosomal protein L7Ae conserved site InterPro Predicted Protein Domain Annotations 1.0 null H3K9ac_fibroblast of lung_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null tonsil_8a1 HPA Tissue Sample Gene Expression Profiles 1.0 1.21415 intracellular membrane-bounded organelle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 H3K4me3_thymus_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null MAX_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_GM10248_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K36me3_fibroblast of dermis_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WH7G-0826-SM-4LVMR GTEx Tissue Sample Gene Expression Profiles -1.0 -1.0531 TARDBP Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_embryonic fibroblast_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ELF1_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null cell COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 H3K4me3_erythroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null hsa-miR-4716-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.40969 KLF1 ChEA Transcription Factor Targets 1.0 null BL2596 (PIAS2) NURSA Protein Complexes 1.0 null G3BP2 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-UTHO-0011-R11A-SM-3GIJE GTEx Tissue Sample Gene Expression Profiles 1.0 0.975353 RPL3 Pathway Commons Protein-Protein Interactions 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A1MF-01A-11R-A13Y-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K27ac_MEL cell line_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null TEAD4_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null VZ in hypothalamic portion Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.53263 H3K9ac_skeletal muscle myoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-AL-7173-01A-11R-2139-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null G122 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.902426 RPS15A Pathway Commons Protein-Protein Interactions 1.0 null MAX_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EPN1 Pathway Commons Protein-Protein Interactions 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-56-7580-01A-11R-2045-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null lung TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.0758 BL6487 (ERF) NURSA Protein Complexes 1.0 null Brain Lower Grade Glioma_LGG_TCGA-VM-A8C9-01A-11R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null r7 part of cochlear column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.44629 ribonucleoprotein complex biogenesis GO Biological Process Annotations 2015 1.0 null GTEX-S95S-1626-SM-2XCDJ GTEx Tissue Sample Gene Expression Profiles -1.0 -0.846439 EP300 ENCODE Transcription Factor Targets 1.0 null inferolateral temporal cortex (area TEv, area 20)_37 yrs_M_12303 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.84195 inferolateral temporal cortex (area TEv, area 20)_11 yrs_F_12289 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.29018 anterior (rostral) cingulate (medial prefrontal) cortex_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.90573 cellular process GO Biological Process Annotations 2015 1.0 null Entorhinal area, medial part, ventral zone, layer 3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.82284 valproic acid_mus musculus_gpl1261_gds3002 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me3_fibroblast of the aortic adventitia_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null MYC_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null superficial stratum of r8BI Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.57202 H3K79me2_liver_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null E2F6 ENCODE Transcription Factor Targets 1.0 null DHX9 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-WHSE-3126-SM-3P5ZI GTEx Tissue Sample Gene Expression Profiles 1.0 1.52702 Lung adenocarcinoma_LUAD_TCGA-55-A492-01A-11R-A24H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SKMEL28 CCLE Cell Line Gene CNV Profiles 1.0 1.59302 RPL21 Pathway Commons Protein-Protein Interactions 1.0 null arsenic trioxide_homo sapiens_gpl201_gse48441 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null MAX_NB4_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-S4Q7-0006-SM-3K2AT GTEx Tissue Sample Gene Expression Profiles -1.0 -1.92557 GABPA_HeLa-S3_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null LCP1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-T2IS-3026-SM-32QPM GTEx Tissue Sample Gene Expression Profiles 1.0 0.964989 PGK1 Pathway Commons Protein-Protein Interactions 1.0 null H3K27ac_testis_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-SNMC-0006-SM-2XCFE GTEx Tissue Sample Gene Expression Profiles -1.0 -1.1105 RPMI-8226 GDSC Cell Line Gene Expression Profiles 1.0 1.81268 PFDN2 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-UTHO-3126-SM-3P5ZB GTEx Tissue Sample Gene Expression Profiles 1.0 1.12021 Head and Neck squamous cell carcinoma_HNSC_TCGA-BB-8601-01A-11R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-S95S-0726-SM-4B64H GTEx Tissue Sample Gene Expression Profiles -1.0 -0.998204 H3K27ac_H1 BMP4 Derived Mesendoderm Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-DU-6407-02B-11R-A36H-07,TCGA-DU-6407-02A-12R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CEBPD_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SUPM2 CCLE Cell Line Gene Expression Profiles -1.0 -1.57976 POLR2A ENCODE Transcription Factor Targets 1.0 null A172 BioGPS Cell Line Gene Expression Profiles -1.0 -1.59169 GATA3_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_Mobilized CD34 Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null HNRNPA1 Hub Proteins Protein-Protein Interactions 1.0 null GTL-16 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.04998 SEPT11 Pathway Commons Protein-Protein Interactions 1.0 null H3K27ac_skeletal muscle myoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null HCC193 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.4525 SNRPB Pathway Commons Protein-Protein Interactions 1.0 null GTEX-O5YV-0006-SM-2I5GX GTEx Tissue Sample Gene Expression Profiles -1.0 -1.10718 ALYREF Pathway Commons Protein-Protein Interactions 1.0 null SKNSH CCLE Cell Line Gene CNV Profiles -1.0 -2.24045 H3K4me3_kidney epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XGQ4-0005-SM-4AT5U GTEx Tissue Sample Gene Expression Profiles -1.0 -1.55965 Bladder Urothelial Carcinoma_BLCA_TCGA-GU-A763-01A-11R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BHLHE40_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-NL3H-0011-R6a-SM-2I3G8 GTEx Tissue Sample Gene Expression Profiles 1.0 0.921532 GTEX-X5EB-0526-SM-46MVP GTEx Tissue Sample Gene Expression Profiles -1.0 -1.16145 Head and Neck squamous cell carcinoma_HNSC_TCGA-MZ-A7D7-01A-21R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ME-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.60974 assembly GeneRIF Biological Term Annotations 1.0 null GTEX-PLZ6-0006-SM-33HBZ GTEx Tissue Sample Gene Expression Profiles -1.0 -2.17591 GTEX-XQ8I-1926-SM-4BOOK GTEx Tissue Sample Gene Expression Profiles -1.0 -1.15907 NCI-H510A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.25347 HDAC2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-NL3H-0011-R11A-SM-2I3E6 GTEx Tissue Sample Gene Expression Profiles 1.0 1.79217 RPS27 Pathway Commons Protein-Protein Interactions 1.0 null MCM3 Pathway Commons Protein-Protein Interactions 1.0 null CTCF_HEK293_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SRM Pathway Commons Protein-Protein Interactions 1.0 null PSMB5 Pathway Commons Protein-Protein Interactions 1.0 null cerebellar cortex_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.25419 putamen, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.1959 GABPA_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_HeLa-S3_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_GM12864_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EFM-192A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.11527 CORL88 CCLE Cell Line Gene Expression Profiles -1.0 -1.87581 LIN28A Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_K562_hg19_6 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_foreskin fibroblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null YY1_HCT116_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Bacterial Infection_Leukocyte - Monocyte - Macrophage (MMHCC)_GSE6435 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 0.975099 BL1011 (ZHX1) NURSA Protein Complexes 1.0 null MYC_NB4_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SURF4 Pathway Commons Protein-Protein Interactions 1.0 null FSCN1 Pathway Commons Protein-Protein Interactions 1.0 null CAKI-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.874648 NCIH1155 CCLE Cell Line Gene Expression Profiles 1.0 1.53857 BL2763 (HNRNPU) NURSA Protein Complexes 1.0 null Lung adenocarcinoma_LUAD_TCGA-78-7147-01A-11R-2039-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HCC12 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.7937 nucleolus GO Cellular Component Annotations 2015 1.0 null Hemolysis CTD Gene-Disease Associations 1.0 1.01966 MDAMB453 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.642106 GTEX-V955-0005-SM-3P5ZC GTEx Tissue Sample Gene Expression Profiles -1.0 -1.4182 H3K4me3_Fetal Brain Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A6JE-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null inner SZ in superolateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.61942 H3K4me3_bronchial epithelial cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Perturb_15014_KO_Irf8_SRP265130 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -20.0 Cancer of thyroid_Thyroid_GSE5364 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 1.72427 GTEX-PX3G-0008-SM-48U2L GTEx Tissue Sample Gene Expression Profiles 1.0 1.16205 hsa-miR-4728-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 0.809003 H3K9ac_keratinocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null CREB1_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BL4827 (CEP350) NURSA Protein Complexes 1.0 null GTEX-RWS6-0005-SM-2XCAN GTEx Tissue Sample Gene Expression Profiles -1.0 -1.96302 estradiol_homo sapiens_gpl570_gse23610 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null embryonic structure TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 CREB1_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NFATC1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2AphosphoS5_neural cell_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null respiratory system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null BRAF_druginhibition_38_GDS5085 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -1.53119 GTEX-WFJO-0005-SM-3GIKY GTEx Tissue Sample Gene Expression Profiles -1.0 -1.59325 H3K4me3_cortical plate_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null A2058 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.868491 snornp GeneRIF Biological Term Annotations 1.0 null mediodorsal nucleus of thalamus_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.06889 EXOSC5 Pathway Commons Protein-Protein Interactions 1.0 null Declive (VI) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.14369 rpmi8226 HPA Cell Line Gene Expression Profiles 1.0 1.94768 COMT Pathway Commons Protein-Protein Interactions 1.0 null H4K8ac_IMR90 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null ZNF384_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_astrocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null basolateral amygdaloid nucleus, posterior part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.15454 RFX5_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Prostate adenocarcinoma_PRAD_TCGA-QU-A6IO-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me1_CH12.LX_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null GTF3C2 ENCODE Transcription Factor Targets 1.0 null Cortical amygdalar area, posterior part, lateral zone, layer 3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.17409 flexibility GeneRIF Biological Term Annotations 1.0 null nuclear part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 H3K4me3_cardiac mesoderm_hg19_8 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XGQ4-0004-SM-4AT5S GTEx Tissue Sample Gene Expression Profiles 1.0 0.830849 H3K4me3_GM12865_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null brain GTEx Tissue Gene Expression Profiles 1.0 1.24662 RAB7A Pathway Commons Protein-Protein Interactions 1.0 null Perturb_13625_KO_Cct8_SRP253322 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -4.48038 16542501-SuppTable3 GeneSigDB Published Gene Signatures 1.0 null H3K9ac_liver_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null CTCF_fibroblast of lung_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_Panc1_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null GTEX-T5JC-0011-R8A-SM-32PLM GTEx Tissue Sample Gene Expression Profiles 1.0 1.85538 inferolateral temporal cortex (area TEv, area 20)_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.10154 GTEX-XUZC-0126-SM-4BOO6 GTEx Tissue Sample Gene Expression Profiles 1.0 0.895717 SARS-CoV_72Hour_23935999_GSE47962 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 1.10177 box c/d snornp complex GO Cellular Component Annotations 2015 1.0 null orbital frontal cortex_15 yrs_M_12299 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.29141 GTEX-P4PQ-1626-SM-2HMKK GTEx Tissue Sample Gene Expression Profiles 1.0 0.930358 Lung adenocarcinoma_LUAD_TCGA-78-7149-01A-11R-2039-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HCT116 BioGPS Cell Line Gene Expression Profiles 1.0 1.1568 internal female genital organ TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.056258 H3K4me3_fibroblast of mammary gland_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null cerebellar white matter Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.01345 Cystic Fibrosis_Pancreas_GSE769 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 2.23109 Bladder Urothelial Carcinoma_BLCA_TCGA-CF-A47W-01A-11R-A23W-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null nuclear body COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.630745 H3K4me2_HeLa-S3_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_mammary epithelial cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null C9orf78 Pathway Commons Protein-Protein Interactions 1.0 null TBL1XR1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null ZFR Pathway Commons Protein-Protein Interactions 1.0 null T3M10 CCLE Cell Line Gene CNV Profiles -1.0 -1.75854 KARPAS-45 COSMIC Cell Line Gene Mutation Profiles 1.0 null STAT3 ENCODE Transcription Factor Targets 1.0 null GTEX-WHWD-0005-SM-3LK7D GTEx Tissue Sample Gene Expression Profiles -1.0 -1.27148 IZ in dorsolateral prefrontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.22643 RPL13A Pathway Commons Protein-Protein Interactions 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-G7-6796-01A-11R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null inferolateral temporal cortex (area TEv, area 20)_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.61777 RPL27A Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_HEK293_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ID4_KO_GDS4178_620_mouse_Splenic B cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null rna processing GO Biological Process Annotations 2015 1.0 null SIPA1 Pathway Commons Protein-Protein Interactions 1.0 null MXI1_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WHSB-0005-SM-3LK7C GTEx Tissue Sample Gene Expression Profiles -1.0 -1.4592 EP300_heart_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RPL5 Pathway Commons Protein-Protein Interactions 1.0 null reproductive system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.052558 periventricular nucleus, preoptic portion Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.19246 CCNT2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_1715_OE_Hoxblinc_SRP149346 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -2.2532 HCC2935 CCLE Cell Line Gene CNV Profiles 1.0 1.39954 GTEX-W5WG-0002-SM-3NMDN GTEx Tissue Sample Gene Expression Profiles 1.0 0.899399 CBC412 (AHCTF1) NURSA Protein Complexes 1.0 null H3K27ac_bone marrow macrophage_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-QVJO-0011-R8A-SM-447C7 GTEx Tissue Sample Gene Expression Profiles 1.0 1.81049 SRPRB Pathway Commons Protein-Protein Interactions 1.0 null RPL26L1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-XMK1-0001-SM-4B64F GTEx Tissue Sample Gene Expression Profiles 1.0 0.95848 CBX3_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null FOXM1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PLRG1 Pathway Commons Protein-Protein Interactions 1.0 null RPL29 Pathway Commons Protein-Protein Interactions 1.0 null PPARG JASPAR Predicted Transcription Factor Targets 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-G2-A2EO-01A-11R-A180-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2A_A549_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_mononuclear cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-NFK9-0006-SM-3GACS GTEx Tissue Sample Gene Expression Profiles -1.0 -1.14236 FOXA1 JASPAR Predicted Transcription Factor Targets 1.0 null BCL3 ENCODE Transcription Factor Targets 1.0 null Brain Lower Grade Glioma_LGG_TCGA-VM-A8CF-01A-11R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null LUC7L Pathway Commons Protein-Protein Interactions 1.0 null H2BFS Pathway Commons Protein-Protein Interactions 1.0 null HCC2885 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.38242 striatum_37 pcw_M_263195015 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.890831 EGR1_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CCDC12 Pathway Commons Protein-Protein Interactions 1.0 null EIF4A1 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me1_fibroblast of dermis_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null PDAP1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-WFG7-0001-SM-3P61S GTEx Tissue Sample Gene Expression Profiles 1.0 0.961157 GTEX-R55E-0011-R4A-SM-2TC5H GTEx Tissue Sample Gene Expression Profiles 1.0 1.54776 NCI-H650 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.928743 ATP6V1B2 Pathway Commons Protein-Protein Interactions 1.0 null SLTM Pathway Commons Protein-Protein Interactions 1.0 null HNRNPH2 Pathway Commons Protein-Protein Interactions 1.0 null KNS-62 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.913861 Liver hepatocellular carcinoma_LIHC_TCGA-2Y-A9GY-01A-11R-A38B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cerebellar cortex_35 pcw_F_12295 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.933348 H3K4me3_HepG2_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null SHSY5Y CCLE Cell Line Gene CNV Profiles -1.0 -2.30097 CBX3 Pathway Commons Protein-Protein Interactions 1.0 null liver BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -1.19997 REST-18959480-MESC-mouse ChEA Transcription Factor Binding Site Profiles 1.0 null Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-G8-6907-01A-11R-2213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PAX5 ENCODE Transcription Factor Targets 1.0 null periventricular stratum of r6Ve Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.31584 cardiovascular system TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 helper T-lymphocyte ProteomicsDB Cell Type and Tissue Protein Expression Profiles 1.0 0.921455 H3K27ac_liver_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null TUFM Pathway Commons Protein-Protein Interactions 1.0 null LRIF1 Pathway Commons Protein-Protein Interactions 1.0 null RPS8 Pathway Commons Protein-Protein Interactions 1.0 null MRPS28 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-VJYA-0005-SM-3P5ZD GTEx Tissue Sample Gene Expression Profiles -1.0 -1.28389 ventrolateral preoptic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.9539 BRD-K52459643_-666_HEPG2_6.0_h_10.0_um LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null CCAR1 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_LNCaP clone FGC_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null TK Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.985025 Lung adenocarcinoma_LUAD_TCGA-49-4514-01A-21R-1858-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null anterior (rostral) cingulate (medial prefrontal) cortex_13 pcw_M_12820 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.908052 GTEX-X4XX-0011-R3B-SM-46MWK GTEx Tissue Sample Gene Expression Profiles 1.0 0.873872 SERBP1 Pathway Commons Protein-Protein Interactions 1.0 null Lung adenocarcinoma_LUAD_TCGA-49-4490-01A-21R-1858-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HT-29 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.11527 FOXP2_SK-N-MC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null EMD Pathway Commons Protein-Protein Interactions 1.0 null BL2600 (BRIP1) NURSA Protein Complexes 1.0 null ALDH1B1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-T5JC-0011-R10A-SM-32PM2 GTEx Tissue Sample Gene Expression Profiles 1.0 1.56348 posteroventral (inferior) parietal cortex_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.11137 ZNF263 ENCODE Transcription Factor Targets 1.0 null posterior (caudal) superior temporal cortex (area 22c)_8 yrs_M_12981 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.46821 substantia nigra, compact part Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.4749 COLO 679 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 2.36436 Lung adenocarcinoma_LUAD_TCGA-MN-A4N1-01A-11R-A24X-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null macromolecular complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.04312 CHCHD1 Pathway Commons Protein-Protein Interactions 1.0 null Sarcoma_SARC_TCGA-QQ-A5VC-01A-31R-A32Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HCFC1 ENCODE Transcription Factor Targets 1.0 null Neurobehavioral Manifestations CTD Gene-Disease Associations 1.0 1.35676 FARSB Pathway Commons Protein-Protein Interactions 1.0 null NOC3L Pathway Commons Protein-Protein Interactions 1.0 null EFM19 Achilles Cell Line Gene Essentiality Profiles -1.0 -1.50482 experiments GeneRIF Biological Term Annotations 1.0 null salivarygland_6c HPA Tissue Sample Gene Expression Profiles -1.0 -0.862504 Rectum adenocarcinoma_READ_TCGA-DY-A1DF-01A-11R-A155-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung adenocarcinoma_LUAD_TCGA-49-4486-01A-01R-1206-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Familial combined hyperlipidaemia_lymphoblast_GSE1010 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 1.43212 GTEX-NL4W-0006-SM-2I3GH GTEx Tissue Sample Gene Expression Profiles -1.0 -2.24485 H3K4me3_WI38_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-IQ-A6SH-01A-12R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null protein binding GO Molecular Function Annotations 2015 1.0 null cervical carcinoma cell TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-GC-A6I3-11A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null motif GeneRIF Biological Term Annotations 1.0 null SART3 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_ES-E14_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XOTO-0006-SM-4B64T GTEx Tissue Sample Gene Expression Profiles -1.0 -1.2566 cuneiform nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.887308 H3K27ac_Mobilized CD34 Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null COR-L279 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.857631 ventrolateral prefrontal cortex_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.834511 intracellular non-membrane-bounded organelle GO Cellular Component Annotations 2015 1.0 null epididymis HPA Tissue Protein Expression Profiles -1.0 -0.935947 beckwith-wiedemann syndrome DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 1.00668 intracellular organelle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 PPP1CB Pathway Commons Protein-Protein Interactions 1.0 null MRTO4 Pathway Commons Protein-Protein Interactions 1.0 null posterior (caudal) superior temporal cortex (area 22c)_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.25538 inner portion of medial ganglionic eminence Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.960074 GTEX-QEG5-0226-SM-2I5GI GTEx Tissue Sample Gene Expression Profiles 1.0 1.00233 H3K4me3_fibroblast of foreskin _hg19_2 ENCODE Histone Modification Site Profiles 1.0 null RRP15 Pathway Commons Protein-Protein Interactions 1.0 null CREB1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PSMA4 Pathway Commons Protein-Protein Interactions 1.0 null DHX16 Pathway Commons Protein-Protein Interactions 1.0 null RCC2 Pathway Commons Protein-Protein Interactions 1.0 null PTRF Pathway Commons Protein-Protein Interactions 1.0 null r2 part of lateral pontine nuclei Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.79598 GTEX-N7MT-1026-SM-3TW8T GTEx Tissue Sample Gene Expression Profiles 1.0 1.05115 ASPH Pathway Commons Protein-Protein Interactions 1.0 null CDK2 Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_HepG2_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null YY1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null HA-E2F1_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null posterior (caudal) superior temporal cortex (area 22c)_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.829929 PRMT5 Pathway Commons Protein-Protein Interactions 1.0 null r1 part of vestibulocerebellar nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.64238 H3K4me3_BJ_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null HCFC1_ES-E14_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TMEM109 Pathway Commons Protein-Protein Interactions 1.0 null CNOT1 Pathway Commons Protein-Protein Interactions 1.0 null PICALM Pathway Commons Protein-Protein Interactions 1.0 null MXI1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_liver_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-WXYG-0005-SM-3NB3M GTEx Tissue Sample Gene Expression Profiles -1.0 -1.56085 FBL Pathway Commons Protein-Protein Interactions 1.0 null endocrine gland TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.53602 H3K9me3_fibroblast of dermis_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null UBTF_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CHD2 ENCODE Transcription Factor Targets 1.0 null VZ in posterosuperior (dorsal) parietal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.0832 NR2F2_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null organelle part GO Cellular Component Annotations 2015 1.0 null GTEX-PVOW-0008-SM-48TE8 GTEx Tissue Sample Gene Expression Profiles 1.0 0.94396 testis_7f HPA Tissue Sample Gene Expression Profiles 1.0 1.02831 MAX_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null mRNA Splicing Reactome Pathways 2014 1.0 null GTEX-S33H-1226-SM-4AD69 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.904801 primary auditory cortex (core)_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.04508 ventricular (matrix) zone of cerebellum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.890615 POLR2A_GM12892_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_Caco-2_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null organelle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.045567 POLR2AphosphoS5_HL-60_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-MH-A854-01A-11R-A355-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null r8 part of inferior olive Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.51377 H3K9me3_CH12.LX_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null NDUFS3 Pathway Commons Protein-Protein Interactions 1.0 null dexamethasone_mus musculus_gpl339_gse2342 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null rhombomere 11 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.18944 DAB2 Pathway Commons Protein-Protein Interactions 1.0 null Prostate adenocarcinoma_PRAD_TCGA-KK-A7AY-01A-11R-A33R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TAF1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null pancreas HPA Tissue Gene Expression Profiles -1.0 -1.26625 mRNA_CDX2_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells -1.0 null Perturb_5349_OE_Dux_SRP201141 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 9.01654 H3K4me1_olfactory bulb_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K9ac_ES-E14_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null mantle zone of THyB-V Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.38501 GABPA_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-X4XX-0011-R8B-SM-46MWM GTEx Tissue Sample Gene Expression Profiles 1.0 2.67328 POLR2AphosphoS5_SK-N-MC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null HDAC2 ENCODE Transcription Factor Targets 1.0 null H3K4me3_SK-N-SH_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null POLR2AphosphoS5_Panc1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_Brain Substantia Nigra Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GTEX-T2IS-0011-R3A-SM-32QPB GTEx Tissue Sample Gene Expression Profiles 1.0 2.01502 EIF4G1 Pathway Commons Protein-Protein Interactions 1.0 null ZNF143_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2AphosphoS5_GM12891_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAPK1 Pathway Commons Protein-Protein Interactions 1.0 null ARF5 Pathway Commons Protein-Protein Interactions 1.0 null OE19 CCLE Cell Line Gene Expression Profiles 1.0 1.95204 OVKATE CCLE Cell Line Gene CNV Profiles -1.0 -1.60361 BL2445 (SAFB) NURSA Protein Complexes 1.0 null H3K4me3_choroid plexus epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-SN8G-0526-SM-32PLE GTEx Tissue Sample Gene Expression Profiles -1.0 -0.94557 SC-8005 (ESR1) NURSA Protein Complexes 1.0 null GTEX-N7MT-0011-R10A-SM-2I3E1 GTEx Tissue Sample Gene Expression Profiles 1.0 1.30056 embryonic stem feeder layer BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 0.90542 H3K4me3_bronchial epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Adipocyte BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -0.829102 GTEX-OHPL-0006-SM-3MJHB GTEx Tissue Sample Gene Expression Profiles -1.0 -1.82814 BL531 (MCM10) NURSA Protein Complexes 1.0 null KIDINS220 Pathway Commons Protein-Protein Interactions 1.0 null USF1_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SKMM2 Achilles Cell Line Gene Essentiality Profiles 1.0 1.45019 Lung adenocarcinoma_LUAD_TCGA-50-5066-01A-01R-1628-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K27me3_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TSR1 Pathway Commons Protein-Protein Interactions 1.0 null testis TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.0758 primary cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.631527 YY1_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null COLO849 CCLE Cell Line Gene CNV Profiles 1.0 1.51786 superficial stratum of r9BL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.03818 BLVRB Pathway Commons Protein-Protein Interactions 1.0 null GTEX-S7SE-0011-R4A-SM-2XCDB GTEx Tissue Sample Gene Expression Profiles 1.0 0.859582 H3K9ac_Mesenchymal Stem Cell Derived Adipocyte Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-S5-A6DX-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null periventricular stratum of r1Ve Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.14183 nucleic acid metabolic process GO Biological Process Annotations 2015 1.0 null Brain Lower Grade Glioma_LGG_TCGA-VM-A8CA-01A-11R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null YWHAH Pathway Commons Protein-Protein Interactions 1.0 null SUZ12_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PPID Pathway Commons Protein-Protein Interactions 1.0 null YTHDF2 Pathway Commons Protein-Protein Interactions 1.0 null USP5 MSigDB Cancer Gene Co-expression Modules 1.0 null BRCA1 ENCODE Transcription Factor Targets 1.0 null PSMB6 Pathway Commons Protein-Protein Interactions 1.0 null H3K36me3_keratinocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null amygdaloid complex_26 pcw_F_12949 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.44972 CREB1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null KYSE-450 COSMIC Cell Line Gene Mutation Profiles 1.0 null striatum_37 yrs_M_12303 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.992711 OVISE Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.23759 superior rostral gyrus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.826015 Ventromedial hypothalamic nucleus, ventrolateral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.13138 fulvestrant_homo sapiens_gpl570_gse22533 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-CF-A47T-01A-11R-A23W-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cajal GeneRIF Biological Term Annotations 1.0 null PLC/PRF/5 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.829736 vitamin c_homo sapiens_gpl570_gse11919 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Nop56p-associated pre-rRNA complex CORUM Protein Complexes 1.0 null H3K27ac_Brain Mid Frontal Lobe Roadmap Epigenomics Histone Modification Site Profiles 1.0 null RNPS1 Pathway Commons Protein-Protein Interactions 1.0 null LDHA Pathway Commons Protein-Protein Interactions 1.0 null SK-MEL-31 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.857631 HNRNPD Pathway Commons Protein-Protein Interactions 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-NC-A5HN-01A-11R-A26W-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MTA3_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null hsa-miR-1909 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.843347 TRIM55 Pathway Commons Protein-Protein Interactions 1.0 null dorsal thalamus_8 pcw_M_13058 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.837342 KDM4A_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null carcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.051923 non-membrane-bounded organelle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.050362 vitamin c_homo sapiens_gpl6884_gse16590 GEO Signatures of Differentially Expressed Genes for Small Molecules -1.0 null IFI16 Pathway Commons Protein-Protein Interactions 1.0 null OCI-LY-10 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.50216 hsa-miR-10a TargetScan Predicted Nonconserved microRNA Targets 1.0 1.0155 MAFF ENCODE Transcription Factor Targets 1.0 null RPS9 Pathway Commons Protein-Protein Interactions 1.0 null POLR2AphosphoS5_U-87 MG_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Sarcoma_SARC_TCGA-QC-A7B5-01A-11R-A33J-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null COLO741 CCLE Cell Line Gene CNV Profiles 1.0 1.52208 EGR1 ENCODE Transcription Factor Targets 1.0 null H3K4me3_GM12864_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null NDUFA2 Pathway Commons Protein-Protein Interactions 1.0 null Gene Expression Reactome Pathways 2014 1.0 null mammillary body, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.68011 H3K4me3_fibroblast of upper leg skin_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null EPS15L1 Pathway Commons Protein-Protein Interactions 1.0 null tcof1_15522210_neuroblastoma_gof_mouse_gpl339_gds998 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.15249 UTP18 Pathway Commons Protein-Protein Interactions 1.0 null gigantocellular reticular nuclei Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.5818 OLA1 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me2_H1-hESC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null WDR36 Pathway Commons Protein-Protein Interactions 1.0 null hsa-miR-3921 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.07142 urinary bladder TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null myoblast TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.158543 BL1761 (CTBP1) NURSA Protein Complexes 1.0 null GTEX-RNOR-1426-SM-48FDJ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.11718 HSPA9 Pathway Commons Protein-Protein Interactions 1.0 null H2AFZ ENCODE Transcription Factor Targets 1.0 null TAF1_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A6H3-01A-11R-A35K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney Chromophobe_KICH_TCGA-KL-8336-01A-11R-2315-07 TCGA Signatures of Differentially Expressed Genes for Tumors -1.0 null Prostate adenocarcinoma_PRAD_TCGA-G9-6343-01A-21R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Sarcoma_SARC_TCGA-MJ-A850-01A-11R-A355-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K9ac_HeLa-S3_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null EP300_GM12878_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-S7SE-0011-R11A-SM-2XCDD GTEx Tissue Sample Gene Expression Profiles 1.0 2.03711 KURAMOCHI Achilles Cell Line Gene Essentiality Profiles -1.0 -2.19934 PABPN1 Pathway Commons Protein-Protein Interactions 1.0 null primary visual cortex (striate cortex, area V1/17)_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.971465 LU-65 GDSC Cell Line Gene Expression Profiles 1.0 1.42572 Prostate adenocarcinoma_PRAD_TCGA-VP-A87J-01A-11R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors -1.0 null GTEX-PVOW-0726-SM-2XCF5 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.949651 PSMB2 Pathway Commons Protein-Protein Interactions 1.0 null PL45 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.39822 primary auditory cortex (core)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.892208 Lung adenocarcinoma_LUAD_TCGA-49-4488-01A-01R-1755-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null amygdaloid complex_11 yrs_F_12289 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.835993 PAX5_GM12891_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null m2 part of substantia nigra compacta Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.57658 dorsolateral prefrontal cortex_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.46104 PNPLA6 Pathway Commons Protein-Protein Interactions 1.0 null KNS81 CCLE Cell Line Gene Expression Profiles -1.0 -1.45797 structure GeneRIF Biological Term Annotations 1.0 null SCC9 CCLE Cell Line Gene Expression Profiles -1.0 -1.90996 H3ac_myocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null SIN3A_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-T2IS-0011-R6A-SM-32QP2 GTEx Tissue Sample Gene Expression Profiles 1.0 1.42374 RFX5_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null zona incerta Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.02455 smallintestine BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -1.3826 H3K4me1_limb_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null FLI1 ChEA Transcription Factor Targets 1.0 null GTEX-QMR6-0011-R8A-SM-32PKJ GTEx Tissue Sample Gene Expression Profiles 1.0 2.15102 SK-CO-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.58836 GABPA_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_erythroblast_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-P78B-1326-SM-3P611 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.997059 CS-9665B (CASP3) NURSA Protein Complexes 1.0 null H3K4me1_cortical plate_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null APRT Pathway Commons Protein-Protein Interactions 1.0 null TBP_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ARHGEF1 Pathway Commons Protein-Protein Interactions 1.0 null pineal_night BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 0.90796 GTEX-WZTO-2926-SM-3NM9I GTEx Tissue Sample Gene Expression Profiles 1.0 1.16448 GTEX-OHPK-0006-SM-2HMKH GTEx Tissue Sample Gene Expression Profiles -1.0 -1.63127 H3K4me3_cardiac fibroblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_bone marrow macrophage_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-2Z-A9J5-01A-21R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CDK8_knockdown_88_GSE27869 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations 1.0 1.7251 H3K4me2_fibroblast of lung_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null COLO678 CCLE Cell Line Gene CNV Profiles -1.0 -2.40371 H3K4me3_MEL cell line_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null PSMD13 Pathway Commons Protein-Protein Interactions 1.0 null fallopiantube_8c HPA Tissue Sample Gene Expression Profiles 1.0 0.97983 BL5906 (NFRKB) NURSA Protein Complexes 1.0 null GTEX-TSE9-0005-SM-4DXUF GTEx Tissue Sample Gene Expression Profiles -1.0 -1.28141 nucleus COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.197993 nucleolar part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 H4K20me1_endothelial cell of umbilical vein_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null PA2G4 Pathway Commons Protein-Protein Interactions 1.0 null H2AFZ_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_BE2C_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null WHSC1 ENCODE Transcription Factor Targets 1.0 null prostate gland ProteomicsDB Cell Type and Tissue Protein Expression Profiles -1.0 -1.76231 FUBP1 Pathway Commons Protein-Protein Interactions 1.0 null RAD21_H1-hESC_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null PMVK Pathway Commons Protein-Protein Interactions 1.0 null H3K4me1_Brain Inferior Temporal Lobe Roadmap Epigenomics Histone Modification Site Profiles 1.0 null intracellular membrane-bounded organelle GO Cellular Component Annotations 2015 1.0 null RPS25 Pathway Commons Protein-Protein Interactions 1.0 null CA4 field, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.19258 POLR2A_erythroblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null STAT5A ENCODE Transcription Factor Targets 1.0 null GEMIN5 Pathway Commons Protein-Protein Interactions 1.0 null dexamethasone_mus musculus_gpl81_gds2266 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null A-427 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.04998 SF1 Pathway Commons Protein-Protein Interactions 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-66-2778-01A-02R-0851-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null dorsomedial nucleus, terminal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.10203 GTEX-X585-0011-R2B-SM-46MVF GTEx Tissue Sample Gene Expression Profiles 1.0 1.59008 GTEX-WHSE-0011-R8A-SM-3P5Z1 GTEx Tissue Sample Gene Expression Profiles 1.0 2.76536 CTSD Pathway Commons Protein-Protein Interactions 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-77-7463-01A-11R-2045-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null U2SURP Pathway Commons Protein-Protein Interactions 1.0 null DDX17 Pathway Commons Protein-Protein Interactions 1.0 null fa1 GeneRIF Biological Term Annotations 1.0 null primary motor cortex (area M1, area 4)_18 yrs_M_12984 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -2.1273 EIF3F Pathway Commons Protein-Protein Interactions 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-ES-A2HS-01A-11R-A180-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PANC0213 CCLE Cell Line Gene Expression Profiles -1.0 -1.55106 HCC-202 ProteomicsDB Cell Type and Tissue Protein Expression Profiles 1.0 1.01703 Pyramus (VIII), granular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.07248 cerebellar cortex_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.17028 GTEX-T2IS-3126-SM-32QPK GTEx Tissue Sample Gene Expression Profiles 1.0 1.07892 H3K9ac_myotube_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-TKQ2-0006-SM-33HBH GTEx Tissue Sample Gene Expression Profiles -1.0 -0.889971 SF3B3 Pathway Commons Protein-Protein Interactions 1.0 null dorsolateral prefrontal cortex_8 yrs_M_12981 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 2.36728 H3K4me3_endothelial cell of umbilical vein_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_MCF-7_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null SRF JASPAR Predicted Transcription Factor Targets 1.0 null TRMT6 Pathway Commons Protein-Protein Interactions 1.0 null Pheochromocytoma and Paraganglioma_PCPG_TCGA-W2-A7HF-01A-11R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors -1.0 null EIF3D Pathway Commons Protein-Protein Interactions 1.0 null ELK1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ventrolateral part of VMH Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.3764 RVH421 CCLE Cell Line Gene CNV Profiles 1.0 1.75611 RP1_KO_GDS1845_190_mouse_Retinas GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null DDOST Pathway Commons Protein-Protein Interactions 1.0 null VZ in rostral cingulate neocortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.00454 mantle zone of AStr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.13138 MAX_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RELA JASPAR Predicted Transcription Factor Targets 1.0 null NFIC ENCODE Transcription Factor Targets 1.0 null SYK_druginhibition_289_GSE43510 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -1.38049 EIF2S1 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_fibroblast of gingiva_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null NCIH1105 CCLE Cell Line Gene CNV Profiles 1.0 2.13267 REST_neural cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_MCF-7_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null ZC3H11A ENCODE Transcription Factor Targets 1.0 null H2AK5ac_IMR90 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null RPL7 Pathway Commons Protein-Protein Interactions 1.0 null TRMT61A Pathway Commons Protein-Protein Interactions 1.0 null E2F6_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-T6MN-0011-R10A-SM-32QP7 GTEx Tissue Sample Gene Expression Profiles 1.0 2.12748 JEKO1 CCLE Cell Line Gene Expression Profiles 1.0 2.50873 Lung squamous cell carcinoma_LUSC_TCGA-85-A4JC-01A-11R-A24Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ventrolateral prefrontal cortex_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.963623 NUP155 Pathway Commons Protein-Protein Interactions 1.0 null ABCF1 Pathway Commons Protein-Protein Interactions 1.0 null intestine TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 Sarcoma_SARC_TCGA-3B-A9HO-01A-11R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CCDC137 Pathway Commons Protein-Protein Interactions 1.0 null MAX_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-T2-A6WZ-01A-21R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null FASTKD2 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_WERI-Rb-1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_ES-Bruce4_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null distinct GeneRIF Biological Term Annotations 1.0 null SK-N-FI Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.25133 GTF3C1 Pathway Commons Protein-Protein Interactions 1.0 null CDK2AP1 Pathway Commons Protein-Protein Interactions 1.0 null CTCF_CD14-positive monocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null raphe magnus nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.50744 GTEX-Y8E5-0006-SM-47JWQ GTEx Tissue Sample Gene Expression Profiles -1.0 -2.06749 SNAP23 Pathway Commons Protein-Protein Interactions 1.0 null LONP1 Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_endothelial cell of umbilical vein_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null ZNF143 ENCODE Transcription Factor Targets 1.0 null Hypotensive episode_Renal Tissue_GSE2401 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -1.25725 FXR1 Pathway Commons Protein-Protein Interactions 1.0 null MYC_HeLa-S3_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-D3-A2JO-06A-11R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ERLIN2 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-SE5C-0006-SM-4BRW5 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.30716 H3K27ac_ES-E14_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null ventrolateral prefrontal cortex_8 yrs_M_12981 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 2.33843 primary auditory cortex (core)_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.829344 Down Syndrome_CNS - Brain - Cerebellum (MMHCC)_GSE1611 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -1.42503 CHD2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-S7SF-0008-SM-3NM8T GTEx Tissue Sample Gene Expression Profiles 1.0 0.928755 Liver hepatocellular carcinoma_LIHC_TCGA-BC-A69H-01A-11R-A311-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BHLHE40_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EIF5 Pathway Commons Protein-Protein Interactions 1.0 null STAU1 Pathway Commons Protein-Protein Interactions 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-DD-A73G-01A-22R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NOLC1 Pathway Commons Protein-Protein Interactions 1.0 null inferolateral temporal cortex (area TEv, area 20)_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 2.11928 LSM4 Pathway Commons Protein-Protein Interactions 1.0 null HT1080 BioGPS Cell Line Gene Expression Profiles 1.0 0.943273 PSMA5 Pathway Commons Protein-Protein Interactions 1.0 null SW 1463 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.39822 GART Pathway Commons Protein-Protein Interactions 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5886-01A-11R-1592-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BL2882 (CHEK2) NURSA Protein Complexes 1.0 null POU2F2_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me2_K562_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null shell part of the anterobasal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.28346 KAT2A_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null hsa-miR-4517 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.55165 embryoday7.5 BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 0.854979 uterine cervix TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.264696 ATF1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XBED-0006-SM-47JXO GTEx Tissue Sample Gene Expression Profiles -1.0 -1.93221 MDM2 Pathway Commons Protein-Protein Interactions 1.0 null Brain Lower Grade Glioma_LGG_TCGA-VM-A8CB-01A-11R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZC3H4 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-Q2AG-0011-R1A-SM-2HMJI GTEx Tissue Sample Gene Expression Profiles 1.0 0.903167 SRSF1 Pathway Commons Protein-Protein Interactions 1.0 null Peripheral_Blood_Mononuclear_Primary_Cells Roadmap Epigenomics Cell and Tissue Gene Expression Profiles -1.0 -0.845234 C14orf166 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-SNMC-1526-SM-2XCFN GTEx Tissue Sample Gene Expression Profiles -1.0 -0.841005 MAX_H1-hESC_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null BACH1 ENCODE Transcription Factor Targets 1.0 null Kidney Failure, Chronic HuGE Navigator Gene-Phenotype Associations 1.0 null AtrioventricularNode BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.03752 GTEX-UTHO-0011-R3A-SM-3GIK8 GTEx Tissue Sample Gene Expression Profiles 1.0 0.847266 SP1 ENCODE Transcription Factor Targets 1.0 null 17616640-TableS1 GeneSigDB Published Gene Signatures 1.0 null GTEX-WL46-0011-R1A-SM-3LK6M GTEx Tissue Sample Gene Expression Profiles 1.0 1.40129 RPMI 8226 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.1107 Intercalated amygdalar nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.00085 MCF7 CCLE Cell Line Gene CNV Profiles -1.0 -1.89004 Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-FF-8046-01A-11R-2213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null posteroventral (inferior) parietal cortex_13 pcw_M_12820 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.975809 CSTB_KO_GSE47516_678_mouse_mouse cerebellum at P30 GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null GSTO1 Pathway Commons Protein-Protein Interactions 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5884-01A-11R-1592-07 TCGA Signatures of Differentially Expressed Genes for Tumors -1.0 null VZ in caudal subicular cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.96371 SF3B5 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me1_G1E-ER4_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null cingulum bundle, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -3.02584 MXI1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-TSE9-0011-R10A-SM-3DB7O GTEx Tissue Sample Gene Expression Profiles 1.0 0.842584 COLO 829 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.45342 GTEX-POMQ-0008-SM-48TE7 GTEx Tissue Sample Gene Expression Profiles 1.0 1.23298 EIF4B Pathway Commons Protein-Protein Interactions 1.0 null uterus TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null TCF3 ENCODE Transcription Factor Targets 1.0 null GTEX-QLQW-0005-SM-2S1RA GTEx Tissue Sample Gene Expression Profiles -1.0 -1.2489 inferolateral temporal cortex (area TEv, area 20)_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.831153 GTEX-XUJ4-0004-SM-4BOQE GTEx Tissue Sample Gene Expression Profiles 1.0 0.899742 BT549 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -1.87647 XPO1 Pathway Commons Protein-Protein Interactions 1.0 null PTCD3 Pathway Commons Protein-Protein Interactions 1.0 null NAA15 Pathway Commons Protein-Protein Interactions 1.0 null mantle zone of the Fc Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.28514 Uterine Carcinosarcoma_UCS_TCGA-N7-A4Y8-01A-11R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NOP10 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-XYKS-0005-SM-4BRUD GTEx Tissue Sample Gene Expression Profiles -1.0 -0.95555 Skin Cutaneous Melanoma_SKCM_TCGA-GN-A4U7-06A-21R-A32P-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PRKCB Pathway Commons Protein-Protein Interactions 1.0 null GTEX-RN64-1826-SM-48FDV GTEx Tissue Sample Gene Expression Profiles -1.0 -1.20669 GTEX-T5JW-0008-SM-4DM5X GTEx Tissue Sample Gene Expression Profiles 1.0 0.906451 GTEX-OXRN-0005-SM-2I5EU GTEx Tissue Sample Gene Expression Profiles -1.0 -1.21388 SNRPD3 Pathway Commons Protein-Protein Interactions 1.0 null Brain Lower Grade Glioma_LGG_TCGA-HT-7860-01A-11R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors -1.0 null USF2 JASPAR Predicted Transcription Factor Targets 1.0 null hsa-miR-10b TargetScan Predicted Nonconserved microRNA Targets 1.0 1.0155 MELHO CCLE Cell Line Gene CNV Profiles 1.0 2.14856 H3K9ac_K562_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null S1P_Deficiency_GDS3654_521_mouse_Liver GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null tcf12_20154672_cd4pos_cd8pos_thymocytes_thymus_lof_mouse_gpl6246_gse19923 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.127455 Kidney renal papillary cell carcinoma_KIRP_TCGA-SX-A7SL-01A-11R-A355-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null IGR-37 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.858807 pituitary GTEx Tissue Gene Expression Profiles 1.0 1.6601 ISY1 Pathway Commons Protein-Protein Interactions 1.0 null ATP5C1 Pathway Commons Protein-Protein Interactions 1.0 null HN Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.45188 H3K79me2_C2C12_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Neoplasms CTD Gene-Disease Associations 1.0 1.50599 H3K27ac_CD8 Naive Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null medial mammillary nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.981549 basomedial amygdaloid nucleus, posterior part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.35053 H3K4me1_H1-hESC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null CHD2_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null IGF2BP2 Pathway Commons Protein-Protein Interactions 1.0 null duodenum HPA Tissue Protein Expression Profiles -1.0 -0.935947 RPL23 Pathway Commons Protein-Protein Interactions 1.0 null SIN3A_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null COR-L88 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.32964 GTEX-N7MS-2526-SM-2D7W3 GTEx Tissue Sample Gene Expression Profiles 1.0 1.20718 Lung adenocarcinoma_LUAD_TCGA-67-3770-01A-01R-0946-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Prostate adenocarcinoma_PRAD_TCGA-KK-A7B0-01A-11R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-E7-A7DU-01A-11R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GABPA_HL-60_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CREM ChEA Transcription Factor Targets 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A71A-01A-22R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_B cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null carcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.053726 HK2 Pathway Commons Protein-Protein Interactions 1.0 null COV413B Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.972859 paraterete nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.21595 EBC-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.73075 CTCF_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null nuclear part LOCATE Curated Protein Localization Annotations 1.0 null Brain Diseases CTD Gene-Disease Associations 1.0 1.01739 H3K4me3_myocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null FOS_MCF 10A_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H460 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.843773 SNRPA Pathway Commons Protein-Protein Interactions 1.0 null TPM3 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_fibroblast of lung_hg19_6 ENCODE Histone Modification Site Profiles 1.0 null PPP2CA Pathway Commons Protein-Protein Interactions 1.0 null r10 part of spinal vestibular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.21256 H3K4me1_kidney_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTF2F1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ACTBL2 Pathway Commons Protein-Protein Interactions 1.0 null periventricular stratum of APal Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.74387 CLTC Pathway Commons Protein-Protein Interactions 1.0 null rna metabolic process GO Biological Process Annotations 2015 1.0 null GTEX-QMRM-0005-SM-3NB2A GTEx Tissue Sample Gene Expression Profiles -1.0 -1.38447 Skin Cutaneous Melanoma_SKCM_TCGA-IH-A3EA-01A-11R-A20F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null KMS-12-PE Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.76903 Cardiovascular Abnormalities CTD Gene-Disease Associations 1.0 1.23712 17910759-TableS5 GeneSigDB Published Gene Signatures 1.0 null Cortical amygdalar area, posterior part, medial zone, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.14528 SF3B1 Pathway Commons Protein-Protein Interactions 1.0 null primary visual cortex (striate cortex, area V1/17)_8 yrs_M_12981 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.7286 PAX5_GM12892_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WWYW-0005-SM-3NB3K GTEx Tissue Sample Gene Expression Profiles -1.0 -1.04143 NCI-H1155 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.7937 Kidney Diseases CTD Gene-Disease Associations 1.0 1.65023 CTCFL_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null NPM1 Pathway Commons Protein-Protein Interactions 1.0 null levodopa-1972 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null REST_HeLa-S3_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null M-1 BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 1.30908 GTEX-OIZI-0008-SM-2XCFD GTEx Tissue Sample Gene Expression Profiles -1.0 -0.837623 BL3203 (SIRT1) NURSA Protein Complexes 1.0 null Brain Lower Grade Glioma_LGG_TCGA-DU-8161-01A-11R-2256-07 TCGA Signatures of Differentially Expressed Genes for Tumors -1.0 null MRM1 Pathway Commons Protein-Protein Interactions 1.0 null CELF2 Pathway Commons Protein-Protein Interactions 1.0 null BRD-K23363278_CYT997_THP1_6.0_h_1.0_um LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-CF-A5UA-01A-11R-A28M-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null STAT5A_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null r6 part of dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.44837 CHD2_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WHSE-1126-SM-3NMBU GTEx Tissue Sample Gene Expression Profiles -1.0 -0.902172 GTEX-R55E-2526-SM-2TC6H GTEx Tissue Sample Gene Expression Profiles 1.0 0.994039 H3K4me3_GM12865_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null PDCD10 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me1_testis_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null organism form TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 Cerebellar nuclei Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.01834 ZNF384 ENCODE Transcription Factor Targets 1.0 null nufip GeneRIF Biological Term Annotations 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-CC-A7IJ-01A-11R-A33R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_astrocyte of the spinal cord_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null AIMP2 Pathway Commons Protein-Protein Interactions 1.0 null male reproductive system TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.53602 SPTBN1 Pathway Commons Protein-Protein Interactions 1.0 null EFO21 Achilles Cell Line Gene Essentiality Profiles -1.0 -1.02365 HDAC1 ENCODE Transcription Factor Targets 1.0 null CCT4 Pathway Commons Protein-Protein Interactions 1.0 null eye disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.045232 PPIL1 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_fibroblast of lung_hg19_4 ENCODE Histone Modification Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-BA-4074-01A-01R-1436-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BL2041 (XRN2) NURSA Protein Complexes 1.0 null inferolateral temporal cortex (area TEv, area 20)_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.924039 MAX_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SNU1076 CCLE Cell Line Gene Expression Profiles -1.0 -2.06175 hsa-miR-4756-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.20993 MYOG_myocyte_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null TRAP1 Pathway Commons Protein-Protein Interactions 1.0 null TBL1XR1 ENCODE Transcription Factor Targets 1.0 null G28T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.31505 POLR2E Pathway Commons Protein-Protein Interactions 1.0 null CKAP5 Pathway Commons Protein-Protein Interactions 1.0 null ZNHIT6 Pathway Commons Protein-Protein Interactions 1.0 null ATF1 ENCODE Transcription Factor Targets 1.0 null GTEX-TML8-0001-SM-3NMAF GTEx Tissue Sample Gene Expression Profiles 1.0 0.859073 Motor Skills Disorders CTD Gene-Disease Associations 1.0 1.02971 temporal GeneRIF Biological Term Annotations 1.0 null RPL26 Pathway Commons Protein-Protein Interactions 1.0 null Type 1 diabetes mellitus_Myocardial tissue_GSE4616 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -3.26823 CTCF_GM12878_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null anterior hypothalamic area, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.09727 POLR2AphosphoS5_HL-60_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PSMA6 Pathway Commons Protein-Protein Interactions 1.0 null Folium-tuber vermis (VII), molecular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.61637 MAX_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Ribosomal protein L7Ae/L8/Nhp2 family InterPro Predicted Protein Domain Annotations 1.0 null H4K91ac_H1 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null H3K4me1_G1E_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null MYC_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null YY1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RUNX3_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null THOC2 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-OOBJ-1026-SM-3NB2L GTEx Tissue Sample Gene Expression Profiles -1.0 -1.39356 cerebellar cortex_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.10976 MYBBP1A Pathway Commons Protein-Protein Interactions 1.0 null GTEX-QEG4-0006-SM-2I5FY GTEx Tissue Sample Gene Expression Profiles -1.0 -0.842691 ETS1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null PAX5_GM12878_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null ZCCHC3 Pathway Commons Protein-Protein Interactions 1.0 null brain TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.53602 GTEX-PWO3-0005-SM-2I5FS GTEx Tissue Sample Gene Expression Profiles -1.0 -1.41666 KDM5B_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null YY1_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null EZH2 ENCODE Transcription Factor Targets 1.0 null H3K27ac_osteoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null BL5778 (TNKS1BP1) NURSA Protein Complexes 1.0 null primary visual cortex (striate cortex, area V1/17)_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.839568 BL5966 (RANBP3) NURSA Protein Complexes 1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2860-03A-01T-0736-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2A_MCF-7_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null well GeneRIF Biological Term Annotations 1.0 null YY1_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null FLNB Pathway Commons Protein-Protein Interactions 1.0 null ELF1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null UACC812 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -0.676956 FOXP2 ChEA Transcription Factor Targets 1.0 null MRPL13 Pathway Commons Protein-Protein Interactions 1.0 null UTP3 Pathway Commons Protein-Protein Interactions 1.0 null HADHA Pathway Commons Protein-Protein Interactions 1.0 null MRPS34 Pathway Commons Protein-Protein Interactions 1.0 null ETS1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27ac_cortical plate_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-SJXC-0426-SM-2XCFH GTEx Tissue Sample Gene Expression Profiles -1.0 -0.920074 orbital frontal cortex_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.967738 GTEX-PVOW-0011-R3A-SM-32PKX GTEx Tissue Sample Gene Expression Profiles 1.0 1.09428 GNL3 Pathway Commons Protein-Protein Interactions 1.0 null r6 part of posteroventral cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.03157 H3K9ac_fibroblast of dermis_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MLLT4 Pathway Commons Protein-Protein Interactions 1.0 null skin TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.53602 estradiol_homo sapiens_gpl570_gse11352 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null XRCC5 Pathway Commons Protein-Protein Interactions 1.0 null rna splicing, via transesterification reactions with bulged adenosine as nucleophile GO Biological Process Annotations 2015 1.0 null GTEX-OXRO-0006-SM-2I5EM GTEx Tissue Sample Gene Expression Profiles -1.0 -1.72825 inferior occipital gyrus, right, inferior bank of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.928748 precommissural nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.74959 H3K27ac_placenta_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null medial geniculate complex, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 2.22884 VAMP8 Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null primary metabolic process GO Biological Process Annotations 2015 1.0 null POLR2AphosphoS5_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLA2 Pathway Commons Protein-Protein Interactions 1.0 null TCF12_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CREB1_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me2_mammary epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null BL2920 (SPHK1) NURSA Protein Complexes 1.0 null NELFE Pathway Commons Protein-Protein Interactions 1.0 null BL41 CCLE Cell Line Gene Expression Profiles 1.0 1.45625 501A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.912726 H3K4me3_foreskin fibroblast_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H3K9ac_HepG2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-55-8514-01A-11R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-39-5037-01A-01R-1443-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cbs GeneRIF Biological Term Annotations 1.0 null RBM34 Pathway Commons Protein-Protein Interactions 1.0 null posterior (caudal) superior temporal cortex (area 22c)_11 yrs_F_12289 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.13646 female reproductive system TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.53602 mrna splicing, via spliceosome GO Biological Process Annotations 2015 1.0 null JHOM2B CCLE Cell Line Gene Expression Profiles -1.0 -2.99475 GTEX-XGQ4-0008-SM-4AT3Z GTEx Tissue Sample Gene Expression Profiles 1.0 1.41414 SEPT2 Pathway Commons Protein-Protein Interactions 1.0 null gracile nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.23113 H2AFZ_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null 19286929-SuppTable1 GeneSigDB Published Gene Signatures 1.0 null GTEX-S7SE-0011-R8A-SM-2XCDG GTEx Tissue Sample Gene Expression Profiles 1.0 1.71943 GTEX-TSE9-3126-SM-4DXSY GTEx Tissue Sample Gene Expression Profiles 1.0 1.3315 GTEX-RTLS-0006-SM-2TF58 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.83912 HSP90AA1 Pathway Commons Protein-Protein Interactions 1.0 null PML ENCODE Transcription Factor Targets 1.0 null AKT1_knockout_212_GSE39699 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -1.41082 nuclear part GO Cellular Component Annotations 2015 1.0 null GTEX-RNOR-2326-SM-2TF4I GTEx Tissue Sample Gene Expression Profiles 1.0 1.04895 NCI-H1869 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.28445 Lung adenocarcinoma_LUAD_TCGA-44-3398-01A-01R-1107-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Brain Lower Grade Glioma_LGG_TCGA-R8-A73M-01A-11R-A32Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CHD1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K79me2_MEL cell line_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-P44H-0011-R11A-SM-2XCER GTEx Tissue Sample Gene Expression Profiles 1.0 1.00371 H3K4me3_fibroblast of lung_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null PSMB1 Pathway Commons Protein-Protein Interactions 1.0 null MEL-HO Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.78493 Kidney renal clear cell carcinoma_KIRC_TCGA-A3-3374-01A-02R-1325-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null primary auditory cortex (core)_15 yrs_M_12299 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.985481 Nephrolithiasis_Kidney_GSE10162 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 1.85695 H3K4me3_MEL cell line_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null DDX47 Pathway Commons Protein-Protein Interactions 1.0 null Sarcoma_SARC_TCGA-MB-A5Y9-01A-11R-A29R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SNU1079 CCLE Cell Line Gene Expression Profiles -1.0 -1.7767 Perturb_9052_KD_CACTIN_SRP075920 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 14.2969 E2F1-18555785-MESC-mouse ChEA Transcription Factor Binding Site Profiles 1.0 null Pancreatic adenocarcinoma_PAAD_TCGA-HV-A7OP-01A-11R-A33R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PDHA1 Pathway Commons Protein-Protein Interactions 1.0 null cervical adenocarcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.129902 PAXBP1 Pathway Commons Protein-Protein Interactions 1.0 null NR2C2_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-HT-7603-01A-21R-2090-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung adenocarcinoma_LUAD_TCGA-50-5072-01A-21R-1858-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null YES1 Pathway Commons Protein-Protein Interactions 1.0 null sequential GeneRIF Biological Term Annotations 1.0 null POLR2A_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null PE01 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.857631 SLC3A2 Pathway Commons Protein-Protein Interactions 1.0 null POLR2AphosphoS5_endothelial cell of umbilical vein_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CSNK1A1 Pathway Commons Protein-Protein Interactions 1.0 null MAZ_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H2228 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.5126 superficial stratum of r8BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.01802 GTEX-WVLH-0011-R4A-SM-3MJFS GTEx Tissue Sample Gene Expression Profiles 1.0 1.42304 EAPP Pathway Commons Protein-Protein Interactions 1.0 null HIST1H4F Pathway Commons Protein-Protein Interactions 1.0 null specific GeneRIF Biological Term Annotations 1.0 null H3K4me3_MCF-7_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Hyperplasia CTD Gene-Disease Associations 1.0 1.43428 BRD-K93578426_-666_MCF7_24.0_h_10.0_um LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-R55F-0011-R8A-SM-2TF4F GTEx Tissue Sample Gene Expression Profiles 1.0 1.98035 H3K4me3_keratinocyte_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null OAW28 CCLE Cell Line Gene Expression Profiles -1.0 -2.26297 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-FU-A3EO-01A-11R-A213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null bone marrow HPA Tissue Protein Expression Profiles -1.0 -0.935947 HSPG2 Pathway Commons Protein-Protein Interactions 1.0 null hsa-miR-3120-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.20993 accessory entopeduncular nucleus (post-migratory) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.18339 GTEX-N7MS-0007-SM-2D7W1 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.04701 lateral habenular nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.44764 NARS Pathway Commons Protein-Protein Interactions 1.0 null NCI-H292 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.08961 GTEX-WVLH-3126-SM-3MJGA GTEx Tissue Sample Gene Expression Profiles 1.0 0.977935 SRSF11 Pathway Commons Protein-Protein Interactions 1.0 null studies GeneRIF Biological Term Annotations 1.0 null SNB19 BioGPS Cell Line Gene Expression Profiles -1.0 -1.08835 HCC364 CCLE Cell Line Gene Expression Profiles 1.0 1.46391 H3K4me2_GM12878_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null paraventricular nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.83836 liver ProteomicsDB Cell Type and Tissue Protein Expression Profiles -1.0 -1.10327 GTEX-S7PM-0008-SM-3NM9Q GTEx Tissue Sample Gene Expression Profiles 1.0 1.01698 GANAB Pathway Commons Protein-Protein Interactions 1.0 null TK-10 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.956456 HIV - Human immunodeficiency virus infection_T lymphocyte_GSE6740 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -1.52567 THUMPD1 Pathway Commons Protein-Protein Interactions 1.0 null Pheochromocytoma and Paraganglioma_PCPG_TCGA-SP-A6QC-01A-11R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_astrocyte of the cerebellum_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null CTCF_epithelial cell of esophagus_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null striatum_17 pcw_F_12880 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.878947 VZ in dorsomedial extrastriate cortex (V2) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.991674 H3K4me1_keratinocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me2_myocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null inferolateral temporal cortex (area TEv, area 20)_10 mos_M_12977 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.14317 ELK4 ENCODE Transcription Factor Targets 1.0 null PSMC6 Pathway Commons Protein-Protein Interactions 1.0 null CYCS Pathway Commons Protein-Protein Interactions 1.0 null ventral tuberomammillary nucleus, superficial part (histaminergic) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.80352 SF3B4 Pathway Commons Protein-Protein Interactions 1.0 null KPNB1 Pathway Commons Protein-Protein Interactions 1.0 null substantia nigra reticulata, m1 part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.71804 Cortical amygdalar area, posterior part, medial zone Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.13047 GATA3 ENCODE Transcription Factor Targets 1.0 null mantle zone of r5Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.10953 oculomotor nuclear complex, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.84278 CTCF_fibroblast of upper leg skin_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null essential GeneRIF Biological Term Annotations 1.0 null GTEX-SNMC-0008-SM-4DM5A GTEx Tissue Sample Gene Expression Profiles 1.0 1.20892 RPS16 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_Jurkat_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null HDAC2_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CNOT3-19339689-MESC-mouse ChEA Transcription Factor Binding Site Profiles 1.0 null GTEX-X3Y1-0726-SM-3P5YU GTEx Tissue Sample Gene Expression Profiles -1.0 -1.20087 CTCFL ENCODE Transcription Factor Targets 1.0 null Prostate adenocarcinoma_PRAD_TCGA-J4-A67O-01A-11R-A30B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ChIP_REST_18959480 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null CLNS1A Pathway Commons Protein-Protein Interactions 1.0 null H3K9ac_Chondrocytes from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null dorsolateral prefrontal cortex_15 yrs_M_12299 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.17172 IMMT Pathway Commons Protein-Protein Interactions 1.0 null MYC_MCF-7_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Congenital Abnormalities CTD Gene-Disease Associations 1.0 1.28796 CHD1_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null DNAJB1 Pathway Commons Protein-Protein Interactions 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5169-01A-01R-1426-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null nucleoplasm COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.391615 NCI-H1734 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.908761 RPL28 Pathway Commons Protein-Protein Interactions 1.0 null KDR_knockdown_119_GSE27869 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations 1.0 2.62713 GTEX-RWSA-0005-SM-2XCAO GTEx Tissue Sample Gene Expression Profiles -1.0 -1.18474 LRPPRC Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_retinal pigment epithelial cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null hippocampus (hippocampal formation)_16 pcw_M_12287 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 3.172 lateral nucleus of pulvinar Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.878023 Brain Lower Grade Glioma_LGG_TCGA-HT-7684-01A-11R-2256-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K9ac_Adult Liver Roadmap Epigenomics Histone Modification Site Profiles 1.0 null OV7 Achilles Cell Line Gene Essentiality Profiles 1.0 1.89998 intermediate stratum of r9BI Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.03957 H3K4me3_small intestine_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null MYC_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Tuberomammillary nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.36394 posterior hypothalamic nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.06159 cellular_component LOCATE Predicted Protein Localization Annotations 1.0 null GTEX-TSE9-0011-R6A-SM-3DB7L GTEx Tissue Sample Gene Expression Profiles 1.0 0.855428 S100A8 Pathway Commons Protein-Protein Interactions 1.0 null inferolateral temporal cortex (area TEv, area 20)_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.826305 CHD7 ENCODE Transcription Factor Targets 1.0 null NCI-H378 GDSC Cell Line Gene Expression Profiles -1.0 -2.69689 PDIA6 Pathway Commons Protein-Protein Interactions 1.0 null hsa-miR-92a-3p MiRTarBase microRNA Targets 1.0 null POU2F2_GM12878_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-T8EM-1626-SM-3DB7K GTEx Tissue Sample Gene Expression Profiles -1.0 -0.977916 pedunculo(pontine) tegmental nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.72876 FERMT3 Pathway Commons Protein-Protein Interactions 1.0 null UBL5 Pathway Commons Protein-Protein Interactions 1.0 null FOXP2_PFSK-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-Q2AH-0005-SM-33HBR GTEx Tissue Sample Gene Expression Profiles -1.0 -1.79427 H3K4me3_kidney_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null CTCF_GM12891_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CNBP Pathway Commons Protein-Protein Interactions 1.0 null ANXA1 Pathway Commons Protein-Protein Interactions 1.0 null JJN-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.45033 POLR2A_K562_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_Jurkat_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null EPI-2698-1 (APBB1IP) NURSA Protein Complexes 1.0 null VZ in dorsomedial parietal cortex (area 7m) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.989301 Pyramus (VIII), molecular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.20877 AP2A1 Pathway Commons Protein-Protein Interactions 1.0 null F5 CCLE Cell Line Gene Expression Profiles 1.0 1.90099 arcuate nucleus of hypothalamus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.935434 GTEX-WWYW-3126-SM-3NB39 GTEx Tissue Sample Gene Expression Profiles 1.0 1.10096 AGBL1 Pathway Commons Protein-Protein Interactions 1.0 null Pheochromocytoma and Paraganglioma_PCPG_TCGA-SR-A6MU-01A-11R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null polymorphic layer of caudal subiculum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.928021 NCIH1869 CCLE Cell Line Gene CNV Profiles 1.0 1.50653 OV90 CCLE Cell Line Gene Expression Profiles -1.0 -1.81045 BL4957 (ZNHIT3) NURSA Protein Complexes 1.0 null intermediate stratum of PO2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.38598 GTEX-XUW1-1726-SM-4BOOZ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.08806 H3K27ac_olfactory bulb_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null TK1 Pathway Commons Protein-Protein Interactions 1.0 null outer CP in subgenual (subcallosal) cingulate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.28506 PPIH Pathway Commons Protein-Protein Interactions 1.0 null GTEX-QVJO-0011-R10A-SM-2S1QJ GTEx Tissue Sample Gene Expression Profiles 1.0 1.31589 CVB3_9Hour-Infection+U0126_None_GSE697 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -2.20136 AARS Pathway Commons Protein-Protein Interactions 1.0 null PPARD ChEA Transcription Factor Targets 1.0 null H2AFZ_skeletal muscle myoblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null rna GeneRIF Biological Term Annotations 1.0 null H3K4me1_CH12.LX_mm9_4 ENCODE Histone Modification Site Profiles 1.0 null Dorsomedial nucleus of the hypothalamus, ventral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.16021 ELF1_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2AphosphoS5_GM12892_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null superior periolivary nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.09739 GTEX-WHSE-3026-SM-3P5ZH GTEx Tissue Sample Gene Expression Profiles 1.0 1.02026 SNRPA1 Pathway Commons Protein-Protein Interactions 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-D6-A6ES-01A-12R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hippocampus (hippocampal formation)_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.25376 H3K9ac_Brain Substantia Nigra Roadmap Epigenomics Histone Modification Site Profiles 1.0 null DMS 79 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.18356 Inflammation CTD Gene-Disease Associations 1.0 1.59731 A-Vietnam-1203_CIP048_RG3-2004(H5N1)mutPB1-F2del_18Hour_None_GSE43203 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 1.03438 MATR3 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_K562_hg19_4 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_keratinocyte_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-X62O-0008-SM-46MU5 GTEx Tissue Sample Gene Expression Profiles 1.0 0.901944 adenocarcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.05694 NUP188 Pathway Commons Protein-Protein Interactions 1.0 null ZYX Pathway Commons Protein-Protein Interactions 1.0 null viscus TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null RAB35 Pathway Commons Protein-Protein Interactions 1.0 null ACOT9 Pathway Commons Protein-Protein Interactions 1.0 null SPI1 ENCODE Transcription Factor Targets 1.0 null Folium-tuber vermis (VII) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.64381 ZNHIT3 Pathway Commons Protein-Protein Interactions 1.0 null EIF3I Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_H54_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTF2F1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null intracellular COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 TE10 CCLE Cell Line Gene CNV Profiles 1.0 1.94138 Muscular Dystrophy_Muscle - Striated (Skeletal) (MMHCC)_GSE2507 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 2.64351 CUX1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-U412-0006-SM-3DB8J GTEx Tissue Sample Gene Expression Profiles -1.0 -1.64304 RBM10 Pathway Commons Protein-Protein Interactions 1.0 null ETS1_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null striatum_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.61065 H3K4me3_CH12.LX_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null DAZAP1 Pathway Commons Protein-Protein Interactions 1.0 null syndrome DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.078414 Prostate adenocarcinoma_PRAD_TCGA-G9-6347-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZNF263_HEK293_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MDA-MB-435 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.02111 H2AFZ_fibroblast of dermis_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MRPL12 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_CD4+ CD25- IL17+ PMA-Ionomcyin stimulated Th17 Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null LNCaP cell ProteomicsDB Cell Type and Tissue Protein Expression Profiles 1.0 1.56135 Skin Cutaneous Melanoma_SKCM_TCGA-EE-A3AG-06A-31R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null EIF3C Pathway Commons Protein-Protein Interactions 1.0 null dorsolateral part of Med Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.07293 FOXF2 JASPAR Predicted Transcription Factor Targets 1.0 null ETS2_KD_GSE62168_259_mouse_mouse trophoblast stem cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null GTEX-V1D1-0008-SM-4JBIJ GTEx Tissue Sample Gene Expression Profiles 1.0 1.11846 GALK1 Pathway Commons Protein-Protein Interactions 1.0 null Prostate adenocarcinoma_PRAD_TCGA-QU-A6IN-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MAX_SK-N-SH_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null ChIP_JARID1A_20064375 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null GTEX-X88G-0326-SM-47JZ4 GTEx Tissue Sample Gene Expression Profiles 1.0 1.06679 COLO 829 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.72819 H3K9ac_H1-hESC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null paraventricular nuclei, right of thalamus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -2.03299 Bladder Urothelial Carcinoma_BLCA_TCGA-FJ-A871-01A-11R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ventromedial preoptic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.61341 Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5462-11A-01R-1503-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SRSF3 Pathway Commons Protein-Protein Interactions 1.0 null CHD1 ENCODE Transcription Factor Targets 1.0 null UBE2N Pathway Commons Protein-Protein Interactions 1.0 null H3K4me1_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null NUP205 Pathway Commons Protein-Protein Interactions 1.0 null KMS20 CCLE Cell Line Gene CNV Profiles -1.0 -1.49598 GTEX-N7MT-0011-R8a-SM-2I5GU GTEx Tissue Sample Gene Expression Profiles 1.0 0.988541 COLO 201 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.28253 cervical carcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.094964 TCP1 Pathway Commons Protein-Protein Interactions 1.0 null RPS6KA3_knockout_73_GSE22137 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -2.79412 urinary tract TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null caudal ganglionic eminence_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.22241 layer V of caudal entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.08806 Brain Lower Grade Glioma_LGG_TCGA-FG-A6IZ-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null sirolimus_mus musculus_gpl1261_gse5332 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-QEG4-0008-SM-48TYZ GTEx Tissue Sample Gene Expression Profiles 1.0 1.19907 spliceosomal complex COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.098109 MRPS35 Pathway Commons Protein-Protein Interactions 1.0 null hsa-miR-149 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.843347 NAT10 Pathway Commons Protein-Protein Interactions 1.0 null PANC0203 CCLE Cell Line Gene CNV Profiles -1.0 -1.35783 non-membrane-bounded organelle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 GABPA_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null EIF3L Pathway Commons Protein-Protein Interactions 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-IR-A3LA-01A-11R-A22U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null lateral habenular nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.910991 cell culture TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.101946 POLR2A_kidney_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-P44H-0011-R10A-SM-2XCEK GTEx Tissue Sample Gene Expression Profiles 1.0 0.92322 EEF2 Pathway Commons Protein-Protein Interactions 1.0 null H3K27ac_brown adipose tissue_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-HT-A74K-01A-11R-A32Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null inferolateral temporal cortex (area TEv, area 20)_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.21941 core of nucleus accumbens Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.883451 EIF3E Pathway Commons Protein-Protein Interactions 1.0 null animal TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null H3K4me1_brain_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null VASP Pathway Commons Protein-Protein Interactions 1.0 null 17638893-SuppTable2 GeneSigDB Published Gene Signatures 1.0 null retinal disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.061217 CEBPB_A549_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-PW2O-0006-SM-2I3DV GTEx Tissue Sample Gene Expression Profiles -1.0 -1.56695 H3K4me3_H1 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null A4FUK CCLE Cell Line Gene CNV Profiles 1.0 1.54756 KIAA0196 Pathway Commons Protein-Protein Interactions 1.0 null Adrenocortical carcinoma_ACC_TCGA-OR-A5JB-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me1_GM12878_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null cellular component organization or biogenesis GO Biological Process Annotations 2015 1.0 null anterior (rostral) cingulate (medial prefrontal) cortex_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.967427 Overexertion_Leukocyte_GSE3606 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -2.00269 H3K4me2_A549_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null CLIC2 Pathway Commons Protein-Protein Interactions 1.0 null PSMD2 Pathway Commons Protein-Protein Interactions 1.0 null parietal neocortex_8 pcw_M_13058 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.955972 ribosome biogenesis GO Biological Process Annotations 2015 1.0 null SIN3A_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null organic substance metabolic process GO Biological Process Annotations 2015 1.0 null ZNF143_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null A4/FUK Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.64219 poly(a) rna binding GO Molecular Function Annotations 2015 1.0 null layer III of rostral entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.839897 LARP4 Pathway Commons Protein-Protein Interactions 1.0 null SW837 CCLE Cell Line Gene CNV Profiles -1.0 -1.51475 H2AFZ_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null KDM5A ENCODE Transcription Factor Targets 1.0 null GTEX-PX3G-1026-SM-48TZW GTEx Tissue Sample Gene Expression Profiles -1.0 -1.23003 RBM39 Pathway Commons Protein-Protein Interactions 1.0 null PAX5_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Abnormalities, Drug-Induced CTD Gene-Disease Associations 1.0 1.06515 H2AFZ_CD14-positive monocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_Neurosphere Cultured Cells Cortex Derived Roadmap Epigenomics Histone Modification Site Profiles 1.0 null intracellular part LOCATE Predicted Protein Localization Annotations 1.0 null amygdalo-striatal transition Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.45052 ERLIN1 Pathway Commons Protein-Protein Interactions 1.0 null SNU-475 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.877534 trachea BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -0.891638 midline nuclear complex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.827533 PSMD9 Pathway Commons Protein-Protein Interactions 1.0 null PFKP Pathway Commons Protein-Protein Interactions 1.0 null PSMA2 Pathway Commons Protein-Protein Interactions 1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2986-03A-01T-0734-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CNOT3 ChEA Transcription Factor Targets 1.0 null POLR2AphosphoS5_neural cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CL-34 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.07317 WRNIP1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CDC7_knockdown_109_GSE27869 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations 1.0 2.09364 GSK3B_knockdown_158_GSE35351 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations 1.0 1.36773 Perturb_16721_KO_Brca1_SRP094855 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 6.4867 GTEX-S33H-1626-SM-4AD68 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.09596 Ventilator-associated lung injury_Lung Tissue_GSE2411 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 1.62498 Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GR-7353-01A-11R-2213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null internal female genital organ TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null intracellular organelle part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 H3K4me1_HepG2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null OVCAR-5 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.933168 H4K20me1_HepG2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null eGFP-JUND_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PANC 03.27 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.49369 ChIP_TRIM28_19339689 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null SUB1 Pathway Commons Protein-Protein Interactions 1.0 null H2AFZ_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EIF6 Pathway Commons Protein-Protein Interactions 1.0 null BL9239 (GREB1) NURSA Protein Complexes 1.0 null MYL12B Pathway Commons Protein-Protein Interactions 1.0 null TCF7L2_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null COLO679 CCLE Cell Line Gene Expression Profiles 1.0 2.46968 central gray of the pons, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.36157 JUND ENCODE Transcription Factor Targets 1.0 null globose nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.97444 H2AFZ_osteoblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ROCK2 Pathway Commons Protein-Protein Interactions 1.0 null NCI-H345 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -3.35762 intercalated amygdaloid nuclei Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.05183 MAX_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null CADM1_KO_GDS2026_301_mouse_testis GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null TFAP2A ChEA Transcription Factor Targets 1.0 null MYC_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null ZC3H11A Pathway Commons Protein-Protein Interactions 1.0 null UBTF_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null TBP_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null striatum_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.18286 Psoriasis vulgaris_Skin tissue_GSE13355 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -1.71656 SP4 ENCODE Transcription Factor Targets 1.0 null FLI1_megakaryocyte_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRIX1 Pathway Commons Protein-Protein Interactions 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-2Z-A9J7-01A-11R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_WI38_hg19_4 ENCODE Histone Modification Site Profiles 1.0 null 15735024-SuppTable2 GeneSigDB Published Gene Signatures 1.0 null anterior (rostral) cingulate (medial prefrontal) cortex_11 yrs_F_12289 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.34805 HDLBP Pathway Commons Protein-Protein Interactions 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-BT-A3PJ-01A-21R-A220-07 TCGA Signatures of Differentially Expressed Genes for Tumors -1.0 null posterior (caudal) superior temporal cortex (area 22c)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.03935 TRAF6 Hub Proteins Protein-Protein Interactions 1.0 null H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote InterPro Predicted Protein Domain Annotations 1.0 null ZMIZ1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2AphosphoS5_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MACROD1 Pathway Commons Protein-Protein Interactions 1.0 null primary somatosensory cortex (area S1, areas 3,1,2)_11 yrs_F_12289 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.17028 HP1BP3 Pathway Commons Protein-Protein Interactions 1.0 null sense organ TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 CCNT2 ENCODE Transcription Factor Targets 1.0 null CAPZA1 Pathway Commons Protein-Protein Interactions 1.0 null T3M4 CCLE Cell Line Gene CNV Profiles 1.0 1.62624 ATF2_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null RPS2 Pathway Commons Protein-Protein Interactions 1.0 null SF3B2 Pathway Commons Protein-Protein Interactions 1.0 null BL4553 (TRIM33) NURSA Protein Complexes 1.0 null Drug-Induced Liver Injury CTD Gene-Disease Associations 1.0 2.08717 parathyroid gland HPA Tissue Protein Expression Profiles -1.0 -0.935947 ZBTB7A_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null intermediate stratum of LAP Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.03828 RPL10A Pathway Commons Protein-Protein Interactions 1.0 null VCAP Achilles Cell Line Gene Essentiality Profiles 1.0 1.58244 RBMX Pathway Commons Protein-Protein Interactions 1.0 null small_intestine BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -0.974716 spliceosomal complex GO Cellular Component Annotations 2015 1.0 null nuclear speck COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.440916 inferolateral temporal cortex (area TEv, area 20)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.853532 MAX_HCT116_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null dentate gyrus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.976137 primary motor cortex (area M1, area 4)_24 pcw_M_12288 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.856417 H2BK120ac_H9 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Perturb_15034_KD_WDR5_SRP024294 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -6.08363 GTEX-WFJO-0626-SM-4LVMC GTEx Tissue Sample Gene Expression Profiles -1.0 -0.876848 H3K4me3_kidney epithelial cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-69-8255-01A-11R-2287-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ANISOMYCIN DrugBank Drug Targets 1.0 null PKM Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_H7_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-TSE9-0011-R11A-SM-3DB7N GTEx Tissue Sample Gene Expression Profiles 1.0 0.89308 Basomedial amygdalar nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.15551 GTEX-QDVJ-0008-SM-48U2E GTEx Tissue Sample Gene Expression Profiles 1.0 1.09019 EP300_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-N7MS-0011-R11A-SM-2HMJS GTEx Tissue Sample Gene Expression Profiles 1.0 2.87819 H3K4me3_megakaryocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null TBL1XR1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null STAG2 Pathway Commons Protein-Protein Interactions 1.0 null IMP3 Pathway Commons Protein-Protein Interactions 1.0 null periventricular stratum of CbH Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.01308 BL1738 (CARM1) NURSA Protein Complexes 1.0 null nucleus COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 Prostate adenocarcinoma_PRAD_TCGA-2A-A8W1-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors -1.0 null RPA1 Pathway Commons Protein-Protein Interactions 1.0 null 15757864-Table5a GeneSigDB Published Gene Signatures 1.0 null ventrolateral prefrontal cortex_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.868661 Supraoptic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.4679 ventromedial hypothalamic nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.4058 H3K27ac_CD8 Memory Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null TAF1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-P78B-0005-SM-2I5GM GTEx Tissue Sample Gene Expression Profiles -1.0 -1.10627 EIF3H Pathway Commons Protein-Protein Interactions 1.0 null GTEX-QVJO-0006-SM-2S1RC GTEx Tissue Sample Gene Expression Profiles -1.0 -1.81453 JEKO-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 2.23113 HCC1162 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.12915 CAMA-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.878411 LARP1 Pathway Commons Protein-Protein Interactions 1.0 null CTSH Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_B cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null interactions GeneRIF Biological Term Annotations 1.0 null TAF1_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HNRNPA0 Pathway Commons Protein-Protein Interactions 1.0 null EMG1 Pathway Commons Protein-Protein Interactions 1.0 null occipital neocortex_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -2.96152 SNU626 CCLE Cell Line Gene Expression Profiles -1.0 -2.88034 GTEX-XV7Q-2926-SM-4BRUL GTEx Tissue Sample Gene Expression Profiles 1.0 0.938259 PAX5_GM12891_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null PPP1R10 Pathway Commons Protein-Protein Interactions 1.0 null Neural Tube Defects CTD Gene-Disease Associations 1.0 1.1862 LRBA Pathway Commons Protein-Protein Interactions 1.0 null PCDHA2 Pathway Commons Protein-Protein Interactions 1.0 null PTRH2 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me1_bone marrow macrophage_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null YY1 ENCODE Transcription Factor Targets 1.0 null GTEX-X4EO-0006-SM-3P5ZF GTEx Tissue Sample Gene Expression Profiles -1.0 -0.873996 H3K4me3_WI38_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null H2AFV Pathway Commons Protein-Protein Interactions 1.0 null RCOR1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null TMPO Pathway Commons Protein-Protein Interactions 1.0 null r7 (gustatory) part of solitary complex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.76728 nucleolus COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.567585 Liver hepatocellular carcinoma_LIHC_TCGA-CC-A7IG-01A-11R-A33J-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null YY1_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ARAP1 Pathway Commons Protein-Protein Interactions 1.0 null CTCF_GM12874_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAP1LC3B Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_GM06990_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null HNRNPDL Pathway Commons Protein-Protein Interactions 1.0 null H3K4me1_G1E-ER4_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null POLR2AphosphoS5_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null LN428 Achilles Cell Line Gene Essentiality Profiles -1.0 -1.40114 KNS81 Achilles Cell Line Gene Essentiality Profiles -1.0 -1.87724 FEN1 Pathway Commons Protein-Protein Interactions 1.0 null superficial stratum of r5BI Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.41109 AB81 (BRCA1) NURSA Protein Complexes 1.0 null DARS Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_retinal pigment epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null intermediate stratum of CbH Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.03294 H3K4me1_embryonic fibroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null substantia nigra compacta, isthmic part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.2226 RPL31 Pathway Commons Protein-Protein Interactions 1.0 null SLC2A1 Pathway Commons Protein-Protein Interactions 1.0 null USF2_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NSUN2 Pathway Commons Protein-Protein Interactions 1.0 null Psoriasis vulgaris_Skin tissue_GSE6710 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -2.68413 DDX3X Pathway Commons Protein-Protein Interactions 1.0 null STAT4 ChEA Transcription Factor Targets 1.0 null medial subhabenular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.1152 H3K4me3_cardiac mesoderm_hg19_6 ENCODE Histone Modification Site Profiles 1.0 null UKE-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.874277 HIST1H1B Pathway Commons Protein-Protein Interactions 1.0 null Prostate adenocarcinoma_PRAD_TCGA-M7-A724-01A-12R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-U3ZN-0006-SM-3DB7Y GTEx Tissue Sample Gene Expression Profiles -1.0 -1.40463 GTEX-WWYW-0011-R11A-SM-3NB38 GTEx Tissue Sample Gene Expression Profiles 1.0 1.6038 H3K4me3_cardiac mesoderm_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null TSSC4 Pathway Commons Protein-Protein Interactions 1.0 null ZBTB7A ENCODE Transcription Factor Targets 1.0 null GTEX-S4Z8-0006-SM-3K2AQ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.3517 USF1_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null cerebellar cortex_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.07786 H3K9ac_Brain Inferior Temporal Lobe Roadmap Epigenomics Histone Modification Site Profiles 1.0 null amygdaloid complex_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.965539 ANXA2 Pathway Commons Protein-Protein Interactions 1.0 null H3K27ac_CD4+ CD25- CD45RA+ Naive Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null MAZ_IMR-90_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CUX1 ENCODE Transcription Factor Targets 1.0 null SNRNP27 Pathway Commons Protein-Protein Interactions 1.0 null POLR2AphosphoS5_SK-N-SH_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WZTO-0011-R3B-SM-3NMC6 GTEx Tissue Sample Gene Expression Profiles 1.0 1.52414 BL9162 (CARD11) NURSA Protein Complexes 1.0 null SEC24C Pathway Commons Protein-Protein Interactions 1.0 null U2AF1 Pathway Commons Protein-Protein Interactions 1.0 null RFX5 ENCODE Transcription Factor Targets 1.0 null SCRIB Pathway Commons Protein-Protein Interactions 1.0 null ANP32B Pathway Commons Protein-Protein Interactions 1.0 null HMGN3_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-LP-A5U2-01A-11R-A28H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cell part GO Cellular Component Annotations 2015 1.0 null H3K4me3_testis_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-WWYW-0011-R10A-SM-3NB35 GTEx Tissue Sample Gene Expression Profiles 1.0 1.51541 BL616 (CUL9) NURSA Protein Complexes 1.0 null PSMD11 Pathway Commons Protein-Protein Interactions 1.0 null SFPQ Pathway Commons Protein-Protein Interactions 1.0 null upper limb region of M1 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.940698 NCIH650 CCLE Cell Line Gene Expression Profiles -1.0 -1.50935 GTEX-QESD-0006-SM-2I5G6 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.53349 hek293 HPA Cell Line Gene Expression Profiles 1.0 1.59803 Fetal Growth Retardation CTD Gene-Disease Associations 1.0 1.79273 hsa-miR-4284 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.965816 GTEX-U8XE-1526-SM-4E3HT GTEx Tissue Sample Gene Expression Profiles -1.0 -1.07066 GTEX-X4EP-0005-SM-3P5ZE GTEx Tissue Sample Gene Expression Profiles -1.0 -1.74319 Sarcoma_SARC_TCGA-QQ-A5V9-01A-11R-A32Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2A_HGPS cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27ac_small intestine_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null RPL15 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-WZTO-0006-SM-3NM9T GTEx Tissue Sample Gene Expression Profiles -1.0 -1.06734 HNRNPL Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_GM12878_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null NCI-H2595 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.0727 RPS17 Pathway Commons Protein-Protein Interactions 1.0 null CPNE1 Pathway Commons Protein-Protein Interactions 1.0 null POLR2AphosphoS5_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Retinitis Pigmentosa HuGE Navigator Gene-Phenotype Associations 1.0 null HS 255.T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.938478 PSMA3 Pathway Commons Protein-Protein Interactions 1.0 null YY1_SK-N-SH_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SG in midlateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.939005 TAL1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GABP-19822575-HepG2-human ChEA Transcription Factor Binding Site Profiles 1.0 null ENO1 Pathway Commons Protein-Protein Interactions 1.0 null SK-N-SH Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.54952 HNRNPAB Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_fibroblast of pedal digit skin_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null HCC2688 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.39554 RCC1 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_fibroblast of mammary gland_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null BRD-K61323504_sb 225002_THP1_6.0_h_11.1_um LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null posteroventral (inferior) parietal cortex_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.1212 NRF1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null primary somatosensory cortex (area S1, areas 3,1,2)_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.14832 anterior (rostral) cingulate (medial prefrontal) cortex_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.861656 CCT8 Pathway Commons Protein-Protein Interactions 1.0 null LIPE_KO_GDS1318_501_mouse_muscle GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null GTEX-T2IS-0426-SM-32QPE GTEx Tissue Sample Gene Expression Profiles -1.0 -1.12149 SLC1A3 Pathway Commons Protein-Protein Interactions 1.0 null WM-115 COSMIC Cell Line Gene Mutation Profiles 1.0 null paclitaxel_homo sapiens_gpl570_gse39042 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null TAF1_neural cell_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_osteoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null anterior (rostral) cingulate (medial prefrontal) cortex_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.899599 RBM17 Pathway Commons Protein-Protein Interactions 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-G7-6797-01A-11R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors -1.0 null H3K36me3_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-OHPL-2026-SM-3TW8R GTEx Tissue Sample Gene Expression Profiles 1.0 0.868739 fluoxetine_mus musculus_gpl1261_gse35761 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null CLTB Pathway Commons Protein-Protein Interactions 1.0 null GTEX-VJWN-0005-SM-3GIKF GTEx Tissue Sample Gene Expression Profiles -1.0 -0.902059 SRSF10 Pathway Commons Protein-Protein Interactions 1.0 null ELF1_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null liver TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.0758 EVSA-T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.30946 GTEX-RVPU-0005-SM-2TF6L GTEx Tissue Sample Gene Expression Profiles -1.0 -1.66303 periventricular stratum of r7Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.76627 Entorhinal area, medial part, ventral zone, layer 2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.69206 H3K4me3_keratinocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-P5-A72W-01A-11R-A32Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PRPF4 Pathway Commons Protein-Protein Interactions 1.0 null CRNKL1 Pathway Commons Protein-Protein Interactions 1.0 null MYL6 Pathway Commons Protein-Protein Interactions 1.0 null RBBP5_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-AL-A5DJ-01A-11R-A26U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-X585-0011-R3B-SM-46MVG GTEx Tissue Sample Gene Expression Profiles 1.0 1.50583 USF2_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2AphosphoS2_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SIN3A_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SSRP1 Pathway Commons Protein-Protein Interactions 1.0 null inferolateral temporal cortex (area TEv, area 20)_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.872929 Pheochromocytoma and Paraganglioma_PCPG_TCGA-TT-A6YO-01A-11R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null RTCB Pathway Commons Protein-Protein Interactions 1.0 null outer portion of lateral ganglionic eminence Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.965848 GTEX-WOFM-0005-SM-3MJF3 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.42611 H3K4me2_keratinocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K27ac_HeLa-S3_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null SOX2-18692474-MESC-mouse ChEA Transcription Factor Binding Site Profiles 1.0 null BL5398 (FAM175B) NURSA Protein Complexes 1.0 null TRAPPC3 Pathway Commons Protein-Protein Interactions 1.0 null medial habenular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.95587 H3K4me3_astrocyte of the cerebellum_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null lateral preoptic nucleus, PO2 part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.38697 H3K4me3_fibroblast of lung_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-TMMY-0005-SM-33HBN GTEx Tissue Sample Gene Expression Profiles -1.0 -1.1397 BL5529 (CCDC99) NURSA Protein Complexes 1.0 null TAF1_GM12892_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null DDX5 Pathway Commons Protein-Protein Interactions 1.0 null medial parabrachial nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.957575 CTCF_pancreas_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null FN1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-T6MN-1226-SM-3NMA5 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.05891 CTCF_bronchial epithelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null B-cell chronic lymphocytic leukaemia-small lymphocytic lymphoma_Peripheral blood mononuclear cell_GSE8835 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 1.46847 GTEX-PWOO-0008-SM-48TDU GTEx Tissue Sample Gene Expression Profiles 1.0 0.981338 CHD2_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CDK8_knockdown_163_GSE38061 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations 1.0 0.917225 membrane-bounded organelle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 CTCF_GM12865_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null superficial stratum of Mam Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.3899 GTEX-QV31-0226-SM-447BO GTEx Tissue Sample Gene Expression Profiles -1.0 -1.10335 H3K4me3_megakaryocyte_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null MACF1 Pathway Commons Protein-Protein Interactions 1.0 null ESYT1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-QVUS-0006-SM-3GAE8 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.28286 Declive (VI), molecular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.13164 COLO 857 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.31091 DDX27 Pathway Commons Protein-Protein Interactions 1.0 null RPS26 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-RTLS-1326-SM-46MUN GTEx Tissue Sample Gene Expression Profiles -1.0 -1.07541 dorsolateral prefrontal cortex_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 2.08136 lateral subdivision of BNST Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.05308 FADU Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.997411 GTEX-QVUS-0011-R8A-SM-3GAD7 GTEx Tissue Sample Gene Expression Profiles 1.0 3.44715 H3K4me3_Panc1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XUW1-0005-SM-4BOQ7 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.00723 EZH2_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TIF2 (NCOA2) NURSA Protein Complexes 1.0 null 20101236-SuppTable7b GeneSigDB Published Gene Signatures 1.0 null GTEX-R45C-0006-SM-3GAD6 GTEx Tissue Sample Gene Expression Profiles -1.0 -2.52713 FOS ENCODE Transcription Factor Targets 1.0 null CSNK1A1L Pathway Commons Protein-Protein Interactions 1.0 null Inferior olivary complex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -3.08369 r6 part of rostral ventromedial reticular area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.51748 superficial stratum of r6Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.03294 RPS15 Pathway Commons Protein-Protein Interactions 1.0 null MYC_MCF-7_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAFF_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null heterocyclic compound binding GO Molecular Function Annotations 2015 1.0 null GTEX-X62O-0005-SM-46MV1 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.24427 CBC184 (BICD2) NURSA Protein Complexes 1.0 null TLN1 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_WI38_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null JUND_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SRSF2 Pathway Commons Protein-Protein Interactions 1.0 null FAR1 Pathway Commons Protein-Protein Interactions 1.0 null PSMG1 Pathway Commons Protein-Protein Interactions 1.0 null frontal pole, right, superior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.920182 MXI1_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EPB41 Hub Proteins Protein-Protein Interactions 1.0 null CTCF ENCODE Transcription Factor Targets 1.0 null ZNHIT2 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_G1E-ER4_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-WRHK-0005-SM-3MJF5 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.24948 GTEX-Q2AG-0011-R5A-SM-2HMJH GTEx Tissue Sample Gene Expression Profiles 1.0 1.1012 H3K27ac_spleen_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null ELK1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null primary visual cortex (striate cortex, area V1/17)_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.828438 RBM3 Pathway Commons Protein-Protein Interactions 1.0 null NFIC_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-QLQW-0326-SM-447A8 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.12068 CTCF_GM19239_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-PVOW-0006-SM-3NMB8 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.970903 NAPA Pathway Commons Protein-Protein Interactions 1.0 null GTEX-PLZ6-0008-SM-48TD5 GTEx Tissue Sample Gene Expression Profiles 1.0 1.05027 POLR2AphosphoS5_SK-N-SH_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null superficial part of arcuate nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.07746 Entorhinal area, medial part, ventral zone Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.75045 lung HPA Tissue Protein Expression Profiles -1.0 -0.935947 WDR43 Pathway Commons Protein-Protein Interactions 1.0 null H3K27ac_A549_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null BL322 (MLH1) NURSA Protein Complexes 1.0 null MZ2-MEL GDSC Cell Line Gene Expression Profiles 1.0 3.47484 cervical cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.100106 HNRNPF Pathway Commons Protein-Protein Interactions 1.0 null GTEX-PWO3-0011-R8A-SM-2I5GD GTEx Tissue Sample Gene Expression Profiles 1.0 1.60476 VPS26A Pathway Commons Protein-Protein Interactions 1.0 null PSME3 Pathway Commons Protein-Protein Interactions 1.0 null r11 alar plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.44109 YY1_GM12892_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-S7PM-0011-R6A-SM-3NM8F GTEx Tissue Sample Gene Expression Profiles -1.0 -0.877854 RKO cell ProteomicsDB Cell Type and Tissue Protein Expression Profiles 1.0 1.90511 primary somatosensory cortex (area S1, areas 3,1,2)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.985644 H2AFZ_fibroblast of lung_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Heart Defects, Congenital CTD Gene-Disease Associations 1.0 1.03641 H3K4me3_bone marrow macrophage_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null bed nucleus of stria terminalis, lateral amygdaloid division Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.74279 MARK2 Pathway Commons Protein-Protein Interactions 1.0 null dorsolateral prefrontal cortex_11 yrs_F_12289 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.48979 RPS3 Pathway Commons Protein-Protein Interactions 1.0 null PPP2R1A Pathway Commons Protein-Protein Interactions 1.0 null TAF1_PFSK-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null MOLP-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.15991 Poisoning CTD Gene-Disease Associations 1.0 1.8538 H3K4me3_A549_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-MT-A7BN-01A-12R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null lingual gyrus, right, striate Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.925955 mediodorsal nucleus of thalamus_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -2.35923 intracellular organelle part GO Cellular Component Annotations 2015 1.0 null H3K4me1_MEL cell line_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null BRD-A28105619_curcubitacin I_THP1_6.0_h_10.0_um LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null vivo GeneRIF Biological Term Annotations 1.0 null GTEX-PWOO-0006-SM-2I3E3 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.81207 ASNS Pathway Commons Protein-Protein Interactions 1.0 null PPARD-21283829-MYOFIBROBLAST-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null SG in inferolateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.22349 ARL2 Pathway Commons Protein-Protein Interactions 1.0 null TUBB4B Pathway Commons Protein-Protein Interactions 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5457-11A-01R-1503-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null oval paracentral nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.05278 GCN1L1 Pathway Commons Protein-Protein Interactions 1.0 null COLO679 CCLE Cell Line Gene CNV Profiles 1.0 2.59998 POLR2AphosphoS5_G1E_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Duchenne muscular dystrophy (DMD)_Extraocular muscle_GSE1008 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -2.31662 H4K20me1_keratinocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me1_small intestine_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null BL2840 (UIMC1) NURSA Protein Complexes 1.0 null NFATC1 ENCODE Transcription Factor Targets 1.0 null ATP5O Pathway Commons Protein-Protein Interactions 1.0 null LYPLA2 Pathway Commons Protein-Protein Interactions 1.0 null ACAT1 Pathway Commons Protein-Protein Interactions 1.0 null other source TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.098257 H3K27ac_CH12.LX_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Crus 2, granular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.07563 16597596-TableS1-4 GeneSigDB Published Gene Signatures 1.0 null BCLAF1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BL906 (TP73) NURSA Protein Complexes 1.0 null r6 part of parvocellular medial vestibular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.31584 MNAT1_Deficiency - Ablation_GDS2561_690_mouse_Heart - 4 week old GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null FLNC Pathway Commons Protein-Protein Interactions 1.0 null primary auditory cortex (core)_11 yrs_F_12289 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.949933 nucleus coeruleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.15946 involving GeneRIF Biological Term Annotations 1.0 null CNN2 Pathway Commons Protein-Protein Interactions 1.0 null H3K27ac_H1 Derived Mesenchymal Stem Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null H3K27ac_CD4 Memory Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Prostate adenocarcinoma_PRAD_TCGA-M7-A71Z-01A-12R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MDA MB435 BioGPS Cell Line Gene Expression Profiles 1.0 1.38262 Brain Lower Grade Glioma_LGG_TCGA-FG-A6J1-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2A_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null posterior (caudal) superior temporal cortex (area 22c)_12 pcw_F_12835 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.957832 chromosomal disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.372217 ribavirin_homo sapiens_gpl570_gds4391 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-XLM4-3126-SM-4AT6M GTEx Tissue Sample Gene Expression Profiles 1.0 1.25055 RPL11 Pathway Commons Protein-Protein Interactions 1.0 null USP10 Pathway Commons Protein-Protein Interactions 1.0 null AATF MSigDB Cancer Gene Co-expression Modules 1.0 null NCI-H2461 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.14492 ACSM3 Pathway Commons Protein-Protein Interactions 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-IR-A3LI-01A-11R-A32Y-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-REY6-0726-SM-2TF4M GTEx Tissue Sample Gene Expression Profiles -1.0 -1.08317 fallopian tube HPA Tissue Protein Expression Profiles 1.0 1.13616 ZKSCAN1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_mammary epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me1_megakaryocyte_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null NELFE_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null u4 snrna binding GO Molecular Function Annotations 2015 1.0 null EZH2_fibroblast of lung_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GM2313 BioGPS Cell Line Gene Expression Profiles -1.0 -1.96521 MYC_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CCT2 Pathway Commons Protein-Protein Interactions 1.0 null SNRPD1 Pathway Commons Protein-Protein Interactions 1.0 null HMGB2 Pathway Commons Protein-Protein Interactions 1.0 null superficial stratum of PHyB-V Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.21501 H3K4me3_NT2-D1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-S7SE-0011-R6A-SM-2XCD9 GTEx Tissue Sample Gene Expression Profiles 1.0 0.952571 vagina HPA Tissue Protein Expression Profiles 1.0 1.13616 GTEX-XOTO-0011-R11B-SM-4B64O GTEx Tissue Sample Gene Expression Profiles 1.0 1.22307 Lung squamous cell carcinoma_LUSC_TCGA-34-5240-01A-01R-1443-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null medial tuberal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.62876 TRIM28-19339689-MESC-mouse ChEA Transcription Factor Binding Site Profiles 1.0 null Fetal_Intestine_Large Roadmap Epigenomics Cell and Tissue Gene Expression Profiles -1.0 -1.1231 RPL7A Pathway Commons Protein-Protein Interactions 1.0 null DMS454 CCLE Cell Line Gene Expression Profiles -1.0 -2.12933 TCF7L2 ENCODE Transcription Factor Targets 1.0 null A4-Fuk GDSC Cell Line Gene Expression Profiles 1.0 1.95683 MSI2 Pathway Commons Protein-Protein Interactions 1.0 null IPO4 Pathway Commons Protein-Protein Interactions 1.0 null BT20 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -1.0322 KPNA2 Pathway Commons Protein-Protein Interactions 1.0 null CTCF_MCF-7_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null inferior occipital gyrus, right, superior bank of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.836273 H3K4me3_G1E_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null amygdaloid complex_1 yrs_F_12830 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.970306 anterior group of nuclei, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.985958 GTEX-WVLH-0011-R11A-SM-3MJFO GTEx Tissue Sample Gene Expression Profiles 1.0 1.2153 TBP_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Actinic keratosis_Skin tissue_GSE2503 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -1.857 EP300_GM12878_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_GM12869_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null medial habenular nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.60233 MYC-18358816-MESC-mouse ChEA Transcription Factor Binding Site Profiles 1.0 null H3K4me3_foreskin fibroblast_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XBEC-1326-SM-4AT69 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.46202 Parapyramidal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -4.1012 Liver hepatocellular carcinoma_LIHC_TCGA-G3-AAV6-01A-21R-A37K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null head TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.051991 superficial stratum of r1BI Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.32004 Basolateral amygdalar nucleus, ventral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.57553 GTEX-N7MS-0011-R3a-SM-33HC6 GTEx Tissue Sample Gene Expression Profiles 1.0 1.65569 H3K9ac_CH12.LX_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null UFL1 Pathway Commons Protein-Protein Interactions 1.0 null STAT3_MCF 10A_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null U2AF2 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_HEK293_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-BA-A6D8-01A-31R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-PX3G-0826-SM-48TZS GTEx Tissue Sample Gene Expression Profiles -1.0 -1.26359 YMB-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.32858 Lung squamous cell carcinoma_LUSC_TCGA-94-7033-01A-11R-1949-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-T5JC-1726-SM-4DM6U GTEx Tissue Sample Gene Expression Profiles -1.0 -0.874701 OVCAR-5 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.15059 periventricular stratum of r5Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.27252 EIF4A3 Pathway Commons Protein-Protein Interactions 1.0 null HS 675.T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.840411 POLR2A_MCF 10A_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_HepG2_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-OXRK-0006-SM-2HML1 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.26293 Lung adenocarcinoma_LUAD_TCGA-73-4670-01A-01R-1206-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-P4PP-1026-SM-3NM9O GTEx Tissue Sample Gene Expression Profiles -1.0 -1.40513 E2F4_MCF 10A_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null JUND_H1-hESC_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_megakaryocyte_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null SRSF6 Pathway Commons Protein-Protein Interactions 1.0 null KHDRBS1 Pathway Commons Protein-Protein Interactions 1.0 null SIX5 ENCODE Transcription Factor Targets 1.0 null AKR1C1 Pathway Commons Protein-Protein Interactions 1.0 null FLI1_megakaryocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Right_Ventricle Roadmap Epigenomics Cell and Tissue Gene Expression Profiles 1.0 1.52555 animal TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.051053 Adrenocortical carcinoma_ACC_TCGA-OR-A5L3-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Ventromedial hypothalamic nucleus, central part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.10571 H3K27ac_keratinocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null VZ in caudal midinferior temporal cortex (area TF) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -2.79427 H3K4me3_olfactory bulb_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null neuro2a BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 1.62229 H3K27ac_thymus_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null RRS1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-X5EB-0006-SM-46MV5 GTEx Tissue Sample Gene Expression Profiles -1.0 -2.77819 H3K9ac_Stomach Smooth Muscle Roadmap Epigenomics Histone Modification Site Profiles 1.0 null RELA_GM15510_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null KAT2A ENCODE Transcription Factor Targets 1.0 null TAF1_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_skeletal muscle cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null hsa-miR-3972 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.965816 H3K4me3_keratinocyte_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Spliceosome CORUM Protein Complexes 1.0 null cingulum bundle, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.857398 MYC-18555785-MESC-mouse ChEA Transcription Factor Binding Site Profiles 1.0 null CEBPD_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null COV504 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.00274 SKIV2L2 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-RVPV-0006-SM-2TF6Q GTEx Tissue Sample Gene Expression Profiles -1.0 -1.57897 Precancerous Conditions CTD Gene-Disease Associations 1.0 1.43864 HDAC1 Pathway Commons Protein-Protein Interactions 1.0 null r1 roof plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.19495 POLR2A_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SARS-BatSRBD_0Hour_23935999_GSE47962 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 1.71124 H3K9ac_Fetal Lung Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GTF3C2_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EC-GI-10 COSMIC Cell Line Gene Mutation Profiles 1.0 null GTEX-WZTO-0011-R10B-SM-4E3KB GTEx Tissue Sample Gene Expression Profiles 1.0 1.5539 CTCF_fibroblast of upper leg skin_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-UPIC-0926-SM-4IHLV GTEx Tissue Sample Gene Expression Profiles -1.0 -0.858815 Pyramus (VIII) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.13896 GTEX-WL46-2926-SM-3LK82 GTEx Tissue Sample Gene Expression Profiles 1.0 1.41578 CFL1 Pathway Commons Protein-Protein Interactions 1.0 null mRNA Splicing - Major Pathway Reactome Pathways 2014 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-EB-A3XE-01A-12R-A239-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SAP30 ENCODE Transcription Factor Targets 1.0 null DOR 13 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.44781 LASP1 Pathway Commons Protein-Protein Interactions 1.0 null GLUD1 Pathway Commons Protein-Protein Interactions 1.0 null MDA-MB-453 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.942237 superior occipital gyrus, right, inferior bank of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.28551 H3K4me3_choroid plexus epithelial cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null USF1 ENCODE Transcription Factor Targets 1.0 null GTEX-WL46-0011-R2A-SM-3LK6O GTEx Tissue Sample Gene Expression Profiles 1.0 1.26245 orbital frontal cortex_11 yrs_F_12289 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.08601 cellular_component LOCATE Curated Protein Localization Annotations 1.0 null primary somatosensory cortex (area S1, areas 3,1,2)_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.39584 GTEX-T6MN-0011-R5A-SM-32QPD GTEx Tissue Sample Gene Expression Profiles 1.0 1.18089 CTCF_fibroblast of the aortic adventitia_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null smooth muscle HPA Tissue Protein Expression Profiles -1.0 -0.935947 RPS28 Pathway Commons Protein-Protein Interactions 1.0 null XRCC6 Pathway Commons Protein-Protein Interactions 1.0 null MYC-19030024-MESC-mouse ChEA Transcription Factor Binding Site Profiles 1.0 null hsa-miR-4694-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 0.921135 G118 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.958625 H3K4me3_fibroblast of dermis_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27ac_ES-Bruce4_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null compartments GeneRIF Biological Term Annotations 1.0 null MDA-MB-453 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.36243 orbital frontal cortex_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.41489 box c/d snorna binding GO Molecular Function Annotations 2015 1.0 null SNU-475 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.922192 MPP1 Pathway Commons Protein-Protein Interactions 1.0 null whole body TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.051054 tissues, cell types and enzyme sources TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.53602 STON2 Pathway Commons Protein-Protein Interactions 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-DG-A2KJ-01A-11R-A32Y-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Measles Chicago-1_6Hour_16492729_GSE980 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.95806 JUN_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RIF1 Pathway Commons Protein-Protein Interactions 1.0 null STXBP3 Pathway Commons Protein-Protein Interactions 1.0 null TGM2 Pathway Commons Protein-Protein Interactions 1.0 null imatinib_homo sapiens_gpl96_gds3047 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null C32 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.22401 A4/FUK Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.563 GNAI3 Pathway Commons Protein-Protein Interactions 1.0 null Carcinoma CTD Gene-Disease Associations 1.0 1.10942 USP39 Pathway Commons Protein-Protein Interactions 1.0 null NOP58 Pathway Commons Protein-Protein Interactions 1.0 null TUBA4A Pathway Commons Protein-Protein Interactions 1.0 null PFKL Pathway Commons Protein-Protein Interactions 1.0 null pontine nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.0457 CTCF_keratinocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null DAP3 Pathway Commons Protein-Protein Interactions 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5888-01A-11R-1592-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null superficial stratum of r9BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.91442 BCAS2 Pathway Commons Protein-Protein Interactions 1.0 null H3K18ac_IMR90 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null down syndrome DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.533088 GTEX-P44H-0006-SM-2XCFB GTEx Tissue Sample Gene Expression Profiles -1.0 -1.37224 GTEX-PWCY-0005-SM-33HBP GTEx Tissue Sample Gene Expression Profiles -1.0 -2.14268 HCC202 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.17072 Fatty Liver CTD Gene-Disease Associations 1.0 1.52111 GTEX-R3RS-0005-SM-3GAEH GTEx Tissue Sample Gene Expression Profiles -1.0 -0.961189 hela cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.376494 cellular macromolecule metabolic process GO Biological Process Annotations 2015 1.0 null GSK3A_knockdown_201_GDS4305 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -2.2572 Perturb_1606_KO_Tnfaip3_SRP056432 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 1.51361 17724462-TableS2 GeneSigDB Published Gene Signatures 1.0 null TAF1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null tuberal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.24847 H3K4me3_SK-N-MC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-OIZH-0005-SM-2HMJN GTEx Tissue Sample Gene Expression Profiles -1.0 -2.38207 Prostate adenocarcinoma_PRAD_TCGA-G9-6362-01A-11R-1789-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null retina TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.249977 KYSE450 CCLE Cell Line Gene Expression Profiles 1.0 1.59356 HSPA8 Pathway Commons Protein-Protein Interactions 1.0 null TCF3_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TKT Pathway Commons Protein-Protein Interactions 1.0 null GTEX-Q2AG-0011-R6A-SM-2HML7 GTEx Tissue Sample Gene Expression Profiles 1.0 0.884011 HNRNPR Pathway Commons Protein-Protein Interactions 1.0 null POLR2AphosphoS5_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_Caco-2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_endothelial cell of umbilical vein_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null posterior (caudal) superior temporal cortex (area 22c)_18 yrs_M_12984 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.24102 H3K4me3_BJ_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H3K9ac_Breast Myoepithelial Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null hsa-miR-4643 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.880544 CBC411 (AHCTF1) NURSA Protein Complexes 1.0 null SIN3A_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-SIU7-0006-SM-2XCE6 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.3664 JAK2_druginhibition_168_GSE38335 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -0.896276 GTEX-QVUS-0011-R3A-SM-3GAFD GTEx Tissue Sample Gene Expression Profiles 1.0 2.03113 H3K4me3_cardiac mesoderm_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-66-2758-01A-02R-0851-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BL2850 (MED28) NURSA Protein Complexes 1.0 null Sarcoma_SARC_TCGA-X6-A8C4-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K9me1_endothelial cell of umbilical vein_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-NPJ8-0007-SM-2D7VX GTEx Tissue Sample Gene Expression Profiles -1.0 -3.37582 LSM12 Pathway Commons Protein-Protein Interactions 1.0 null ZNF326 Pathway Commons Protein-Protein Interactions 1.0 null substantia nigra reticulata, isthmic part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.08746 YWHAE Pathway Commons Protein-Protein Interactions 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-EB-A82B-01A-11R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null primary motor-sensory cortex (samples)_8 pcw_M_13058 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.32672 H3K4me3_astrocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null RPS19 Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null SYK_druginhibition_283_GSE43510 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -1.94479 superficial stratum of r7BI Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.05616 superficial stratum of r8BL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.19495 H3K9ac_Duodenum Mucosa Roadmap Epigenomics Histone Modification Site Profiles 1.0 null SNB75 BioGPS Cell Line Gene Expression Profiles -1.0 -0.917994 KARS Pathway Commons Protein-Protein Interactions 1.0 null cajal body COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.910647 GTEX-NPJ7-0011-R10A-SM-2I3E5 GTEx Tissue Sample Gene Expression Profiles 1.0 1.23248 A-498 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.885626 CTCF_osteoblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Sarcoma_SARC_TCGA-DX-A3LU-01A-11R-A21T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-RU72-3126-SM-46MUB GTEx Tissue Sample Gene Expression Profiles 1.0 1.11099 HS-SULTAN Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.04761 inferolateral temporal cortex (area TEv, area 20)_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.10714 SK-MEL-28 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.988691 MEL-HO GDSC Cell Line Gene Expression Profiles 1.0 1.578 parasubthalamic nucleus (migrated) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.02628 H3K4me3_HCT116_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null BHLHE40_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null III, right, paravermis Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.04839 VZ in caudal entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.940634 GTEX-XMK1-0326-SM-4B652 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.11254 Basomedial amygdalar nucleus, posterior part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.25896 GTEX-XOTO-3026-SM-4B65M GTEx Tissue Sample Gene Expression Profiles 1.0 0.90453 CTCF_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null YWHAB Pathway Commons Protein-Protein Interactions 1.0 null DKC1 Pathway Commons Protein-Protein Interactions 1.0 null SC-50 (RB1) NURSA Protein Complexes 1.0 null r6 (gustatory) part of solitary complex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.613 E2F4_myocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WFON-1726-SM-4LVMQ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.42425 Prostate adenocarcinoma_PRAD_TCGA-J4-A67N-01A-11R-A30B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ventral premammillary nucleus (migrated) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.40043 SLC25A3 Pathway Commons Protein-Protein Interactions 1.0 null CORO1C Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_GM12878_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null urinary system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null binding GO Molecular Function Annotations 2015 1.0 null mantle zone of Hb Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.36323 CTCF_bronchial epithelial cell_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null HS 69ST Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.841206 POLR2A_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EIF3K Pathway Commons Protein-Protein Interactions 1.0 null r9 part of spinal vestibular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.0281 integument TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.050542 H3K27ac_MCF-7_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null mrna metabolic process GO Biological Process Annotations 2015 1.0 null amygdaloid complex_8 yrs_M_12981 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.62047 heart muscle HPA Tissue Protein Expression Profiles 1.0 1.13616 NOP16 Pathway Commons Protein-Protein Interactions 1.0 null ATF2 ENCODE Transcription Factor Targets 1.0 null GTEX-R53T-0326-SM-48FEC GTEx Tissue Sample Gene Expression Profiles -1.0 -1.09441 SC-543 (ESR1) NURSA Protein Complexes 1.0 null hsa-miR-668 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.07142 H3K27ac_heart_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null HCFC1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2920-03B-01T-0760-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null box GeneRIF Biological Term Annotations 1.0 null BL821 (NOC3L) NURSA Protein Complexes 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-KQ-A41O-01A-12R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K27ac_liver_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-RWS6-1026-SM-47JXD GTEx Tissue Sample Gene Expression Profiles 1.0 0.890816 POP1 Pathway Commons Protein-Protein Interactions 1.0 null Pheochromocytoma and Paraganglioma_PCPG_TCGA-SR-A6MV-01A-11R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SP1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null preoptic region, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.45846 TGS1 Pathway Commons Protein-Protein Interactions 1.0 null OVISE Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.840999 GTEX-X585-0011-R1B-SM-46MVE GTEx Tissue Sample Gene Expression Profiles 1.0 1.25938 ME2 Pathway Commons Protein-Protein Interactions 1.0 null Choline CTD Gene-Chemical Interactions 1.0 null FUBP3 Pathway Commons Protein-Protein Interactions 1.0 null intracellular part LOCATE Curated Protein Localization Annotations 1.0 null PRKRA Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_myotube_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GABPA_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K9ac_Brain Hippocampus Middle Roadmap Epigenomics Histone Modification Site Profiles 1.0 null H3K9ac_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null lateral septal nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.983258 H3K4me3_GM12864_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null SC-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.35268 corpus callosum Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.91628 ribonucleoprotein complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.283295 GTEX-OOBJ-0008-SM-3NB26 GTEx Tissue Sample Gene Expression Profiles 1.0 1.14339 CPSF6 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-SJXC-1226-SM-4DM78 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.10797 DDX56 Pathway Commons Protein-Protein Interactions 1.0 null H2AFZ_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SARS-dORF6_0Hour_23935999_GSE47962 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.93459 GTEX-UPIC-0726-SM-3GADW GTEx Tissue Sample Gene Expression Profiles -1.0 -0.998513 RPN1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-WHSE-0011-R4A-SM-3P5ZN GTEx Tissue Sample Gene Expression Profiles 1.0 1.02424 Oligospermia CTD Gene-Disease Associations 1.0 1.28518 GTEX-V1D1-0726-SM-4JBH7 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.945011 GTEX-UPK5-0006-SM-3GAD8 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.13718 PFN1 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me2_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null D-542MG GDSC Cell Line Gene Expression Profiles -1.0 -1.50984 NDUFS1 Pathway Commons Protein-Protein Interactions 1.0 null C7orf50 Pathway Commons Protein-Protein Interactions 1.0 null inferolateral temporal cortex (area TEv, area 20)_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.70456 H3K27ac_Brain Cingulate Gyrus Roadmap Epigenomics Histone Modification Site Profiles 1.0 null CHP126 CCLE Cell Line Gene Expression Profiles 1.0 1.51471 UBC Pathway Commons Protein-Protein Interactions 1.0 null dorsal juxtacommissural pretectal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.30727 GTEX-X15G-0005-SM-3NMDA GTEx Tissue Sample Gene Expression Profiles -1.0 -1.06313 Prostate adenocarcinoma_PRAD_TCGA-G9-7525-01A-31R-2263-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null RBBP4 Pathway Commons Protein-Protein Interactions 1.0 null female reproductive gland TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.53602 GTEX-S341-0006-SM-3NM8D GTEx Tissue Sample Gene Expression Profiles -1.0 -2.13776 GTEX-NL3H-0011-R10A-SM-2I3E9 GTEx Tissue Sample Gene Expression Profiles 1.0 2.03845 Lung adenocarcinoma_LUAD_TCGA-50-5068-01A-01R-1628-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null KRT1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-XOTO-0826-SM-4B65O GTEx Tissue Sample Gene Expression Profiles -1.0 -1.08464 SMC3_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-P78B-0008-SM-48TE1 GTEx Tissue Sample Gene Expression Profiles 1.0 0.907938 H3K4me3_fibroblast of foreskin _hg19_1 ENCODE Histone Modification Site Profiles 1.0 null cell part LOCATE Curated Protein Localization Annotations 1.0 null embryoday6.5 BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 1.29279 lung TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null GTEX-QLQ7-0005-SM-2S1QP GTEx Tissue Sample Gene Expression Profiles -1.0 -1.45147 DDX18 Pathway Commons Protein-Protein Interactions 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-E7-A8O8-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GABPA ENCODE Transcription Factor Targets 1.0 null POU2F2 ENCODE Transcription Factor Targets 1.0 null JL-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.3158 BZW2 Pathway Commons Protein-Protein Interactions 1.0 null GABPA_MCF-7_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SK-MEL-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 3.19301 VAPA Pathway Commons Protein-Protein Interactions 1.0 null PRPF3 Pathway Commons Protein-Protein Interactions 1.0 null SAP18 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-SUCS-1426-SM-4DM5W GTEx Tissue Sample Gene Expression Profiles -1.0 -1.06396 GTEX-XBEW-0002-SM-4AT5O GTEx Tissue Sample Gene Expression Profiles 1.0 0.838764 lateral preoptic area, PO1 part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.05639 Kidney renal papillary cell carcinoma_KIRP_TCGA-IZ-A6M8-01A-11R-A31O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null nucleolar part GO Cellular Component Annotations 2015 1.0 null Basolateral amygdalar nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.36394 superficial stratum of isBI Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.08635 ETS1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-E1-A7YE-01A-11R-A34F-07 TCGA Signatures of Differentially Expressed Genes for Tumors -1.0 null intercalated nucleus of medulla Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.217 TFRC Pathway Commons Protein-Protein Interactions 1.0 null bonemarrow_6c HPA Tissue Sample Gene Expression Profiles 1.0 1.04245 photoreceptor TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.531879 rostral group of intralaminar nuclei, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.849666 H3K4me3_GM12866_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null EVSAT CCLE Cell Line Gene Expression Profiles 1.0 1.54863 TFAP2A-17053090-MCF7-human ChEA Transcription Factor Binding Site Profiles 1.0 null H2AFZ_mammary epithelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null YKG1 Achilles Cell Line Gene Essentiality Profiles -1.0 -1.30322 ILF3 Pathway Commons Protein-Protein Interactions 1.0 null NOP14 Pathway Commons Protein-Protein Interactions 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-85-A4CL-01A-41R-A26W-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PL45 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.2961 medial portion of STH Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.22253 SW626 COSMIC Cell Line Gene Mutation Profiles 1.0 null HEATR1 Pathway Commons Protein-Protein Interactions 1.0 null HT1376 CCLE Cell Line Gene CNV Profiles -1.0 -1.3529 GTEX-REY6-0005-SM-2TF54 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.29712 MTA3 ENCODE Transcription Factor Targets 1.0 null H3K27ac_Panc1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null HSPA5 Pathway Commons Protein-Protein Interactions 1.0 null sense organ TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.061434 YWHAG Pathway Commons Protein-Protein Interactions 1.0 null Piriform-amygdalar area, polymorph layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.34864 adrenal_4d HPA Tissue Sample Gene Expression Profiles 1.0 1.04585 ZC3H11A_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-T6MN-2626-SM-32PMQ GTEx Tissue Sample Gene Expression Profiles 1.0 1.07492 POLR2A_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null A4 noradrenergic cell group Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.06467 DDX21 Pathway Commons Protein-Protein Interactions 1.0 null ALDOA Pathway Commons Protein-Protein Interactions 1.0 null MAX_C2C12_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Edema CTD Gene-Disease Associations 1.0 1.22145 MYC_Activation - 2 hours_GDS2025_723_mouse_Pancreatic islet beta cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null dorsolateral prefrontal cortex_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.994424 POLR2A_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HDAC6_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null biological_process GO Biological Process Annotations 2015 1.0 null ATP5D Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_MEL cell line_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Pancreatic adenocarcinoma_PAAD_TCGA-FB-A5VM-01A-11R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null urogenital system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null CAPRIN1 Pathway Commons Protein-Protein Interactions 1.0 null RNF2 Pathway Commons Protein-Protein Interactions 1.0 null NCAPD3 Pathway Commons Protein-Protein Interactions 1.0 null Prostate adenocarcinoma_PRAD_TCGA-QU-A6IM-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null A498 GDSC Cell Line Gene Expression Profiles -1.0 -1.43527 nrf1_22586274_liver_lof_mouse_gpl4134_gse35124 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.093509 IGF2BP3 Pathway Commons Protein-Protein Interactions 1.0 null MCM2 Pathway Commons Protein-Protein Interactions 1.0 null NCI-H1568 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.999078 REST_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAFK ENCODE Transcription Factor Targets 1.0 null ELK1 ENCODE Transcription Factor Targets 1.0 null 16597596-TableS2-4 GeneSigDB Published Gene Signatures 1.0 null GTEX-XV7Q-1526-SM-4BRWB GTEx Tissue Sample Gene Expression Profiles 1.0 0.82694 periventricular stratum of r6Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.61492