association	dataset	threshold value	standardized value
NR2F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	56.5926
carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053878
posterior (caudal) superior temporal cortex (area 22c)_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.9238
hela cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.397222
HOXA4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.4783
HCC1599	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-2.94466
HOXB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.1393
Lef1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	29.5893
NCIH510	CCLE Cell Line Gene CNV Profiles	-1.0	-1.3636
mediodorsal nucleus of thalamus_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.941739
HCC202	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.974529
PRRX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.993
KYSE-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.21517
Adrenocortical carcinoma_ACC_TCGA-OR-A5J8-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
LHX5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.3706
GSE229914_1_v_3_keap1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6003-01A-11R-1686-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-CH-5791-01A-11R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ERF::FOXO1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.6418
Acute Myeloid Leukemia_LAML_TCGA-AB-2990-03B-01T-0748-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-SP-A6QC-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Calcitonin family receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.31
TEAD2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.0055
Pax7	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.4836
Pou5f1::Sox2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	40.5503
Kidney renal clear cell carcinoma_KIRC_TCGA-A3-3387-01A-01R-1541-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Rarg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	429.912
intracellular part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.042464
GSE193258,GSE193259_9_v_13_osimertinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Gli1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.3093
GSE151612_0_v_8_pracinostat_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE160817_7_v_1_slamf6_human	RummaGEO Gene Perturbation Signatures	-1.0	null
NCI-H748	COSMIC Cell Line Gene Mutation Profiles	1.0	null
EBNA2-21746931-IB4-LCL-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
G130	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.882123
RPMI-7951	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.19176
Kidney renal papillary cell carcinoma_KIRP_TCGA-KV-A74V-01A-11R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-WB-A81N-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HS852T	CCLE Cell Line Gene CNV Profiles	-1.0	-2.03184
D283MED	DepMap CRISPR Gene Dependency	1.0	2.28612
MDAMB415	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.743136
CLOCK	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.887
bonemarrow	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.1255
Lymphoma_burkitts(Daudi)	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.841483
POLR2A_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GSE135030_11_v_2_fludarabine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2813-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
embryonic structure	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.059793
FOXF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.9259
EVX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.9577
E2F1-17053090-MCF7-human	ChEA Transcription Factor Binding Site Profiles	1.0	null
CTV1DM	DepMap CRISPR Gene Dependency	1.0	3.74167
HNF1A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	55.8338
Alx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.3994
GSE178714_5_v_0_smad2_human	RummaGEO Gene Perturbation Signatures	1.0	null
Yy1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.4982
Prostate adenocarcinoma_PRAD_TCGA-J4-A67L-01A-11R-A30B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-FA-8693-01A-11R-2404-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Sox7	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	33.9432
NCI-H2170	COSMIC Cell Line Gene Mutation Profiles	1.0	null
estradiol_mus musculus_gpl4134_gse23072	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-CC-5260-01A-01R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ventrolateral prefrontal cortex_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.13039
cervical carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.096673
Rxra	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	54.5974
epithelioma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051918
GSE193258,GSE193259_9_v_6_osimertinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
E2F1-17053090-MCF-7-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
SK-MEL-28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.861589
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-4733-01A-02R-1873-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
amygdaloid complex_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.00313
FOXK2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.9149
primary visual cortex (striate cortex, area V1/17)_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.843462
HT	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-E1-A7YV-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
prdm1_00000000_e9dot5_placenta_lof_mouse_gpl6887_gse39584	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	1.0	0.157179
ICC108	DepMap CRISPR Gene Dependency	1.0	2.24663
Fra-1_KO_GDS5078_402_mouse_Lung	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
496100454_FWM_no dementia_TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	6.33472
OVCA 432	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.919746
Lung squamous cell carcinoma_LUSC_TCGA-O2-A52Q-01A-11R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K9me3_CH12.LX_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
ribonucleoprotein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.176024
NCI-H292	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23447
FOXP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.5809
medial ganglionic eminence_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.941739
Perturb_1240_KD_SRSF3_SRP033393	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	10.9072
ZNF558	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	276.689
HT-29	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.855172
LS1034	CCLE Cell Line Gene CNV Profiles	-1.0	-1.49753
Prostate adenocarcinoma_PRAD_TCGA-HC-A6AP-01A-11R-A30B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
orbital frontal cortex_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.04537
carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.218715
Genetic Predisposition to Disease	HuGE Navigator Gene-Phenotype Associations	1.0	null
POU4F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	65.3136
Kidney renal papillary cell carcinoma_KIRP_TCGA-B9-4114-01A-01R-1193-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
LU-134-A	COSMIC Cell Line Gene Mutation Profiles	1.0	null
EPLC-272H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856258
Lhx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	59.95
TE5	CCLE Cell Line Gene CNV Profiles	1.0	2.84853
Olfactory Signaling Pathway	Reactome Pathways 2024	1.0	null
GSE202825_2_v_1_ano1_human	RummaGEO Gene Perturbation Signatures	1.0	null
NCI-H146	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00965
SW1463	CCLE Cell Line Gene CNV Profiles	-1.0	-2.06145
Acute Myeloid Leukemia_LAML_TCGA-AB-2983-03A-01T-0734-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-KK-A8IL-01A-11R-A36G-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HCC1419	CCLE Cell Line Gene CNV Profiles	-1.0	-1.49149
Acute Myeloid Leukemia_LAML_TCGA-AB-2927-03A-01T-0740-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MOG-G-UVW	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ISX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.2902
FOSL1::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.2331
NCIH1355	CCLE Cell Line Gene CNV Profiles	-1.0	-1.91795
DLX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.1735
Rectum adenocarcinoma_READ_TCGA-F5-6810-01A-11R-1830-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ELK1::HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.7768
FOXO1::ELK1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.4599
Prostate adenocarcinoma_PRAD_TCGA-KK-A6E0-01A-11R-A311-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
primary motor-sensory cortex (samples)_19 pcw_F_12885	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.961369
TUR	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SK-MEL-31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.3109
hippocampus (hippocampal formation)_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.961369
molecular transducer activity	GO Molecular Function Annotations 2015	1.0	null
HDMYZ	DepMap CRISPR Gene Dependency	1.0	5.60381
DMS 53	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.84281
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4637-01A-02R-1325-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-EJ-5531-01A-01R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DMRTC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.9321
posterior (caudal) superior temporal cortex (area 22c)_19 pcw_F_12885	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.05275
Head and Neck squamous cell carcinoma_HNSC_TCGA-TN-A7HI-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HOXB8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.3322
VSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.8361
dorsolateral prefrontal cortex_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.836101
PAX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.8372
GPCR, rhodopsin-like, 7TM	InterPro Predicted Protein Domain Annotations	1.0	null
KYSE-520	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H1105	COSMIC Cell Line Gene Mutation Profiles	1.0	null
FOXO1::FLI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.9128
cerebellar cortex_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.57534
EBNA2-21746931-IB4-LCL-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
cell part	GO Cellular Component Annotations 2015	1.0	null
JJ012	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.890644
Crx	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	20.5273
Nr5a2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.0425
Brain Lower Grade Glioma_LGG_TCGA-DU-A7TJ-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2973-03A-01T-0734-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RPE1SS6	DepMap CRISPR Gene Dependency	1.0	2.15791
primary motor cortex (area M1, area 4)_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.71681
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16038
FOXL1	JASPAR Predicted Transcription Factor Targets	1.0	null
COLO 857	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.80365
Sensory Perception	Reactome Pathways 2024	1.0	null
HNF4G	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.9572
PMC10115638-41591_2023_2255_MOESM4_ESM.xlsx-CNS_NB_FOXR2_deletions-Unnamed_3_FOXR2	Rummagene Transcription Factor Associations 2026	1.0	null
U118MG	DepMap CRISPR Gene Dependency	1.0	2.13678
POU3F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	58.7171
cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
intracellular organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.043698
Chromosome 2q37 deletion syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.044
HCC1954	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.60632
TK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.56692
KMS11	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34749
cell part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041819
Prostate adenocarcinoma_PRAD_TCGA-KK-A6DY-01A-12R-A311-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TEAD4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.7079
response to stimulus	GO Biological Process Annotations 2015	1.0	null
KU812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.6766
orbital frontal cortex_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.23625
FOSL1_KO_GSE43695_680_mouse_lung, PBS treatment	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
striatum_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.08982
Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A6TD-01A-51R-A33J-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Sox1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	134.808
MDA-MB-468	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26378
Dux	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	30.5618
GSE178714_1_v_2_smad2_human	RummaGEO Gene Perturbation Signatures	1.0	null
cerebellar cortex_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.941739
DETROIT 562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12013
Kidney Chromophobe_KICH_TCGA-KN-8428-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GR-7351-01A-11R-2213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
primary auditory cortex (core)_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.57534
orbital frontal cortex_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.989169
dorsolateral prefrontal cortex_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.885925
SARS-CoV MA15_Day4-PFU-10^2_None_GSE33266	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-0.733308
105KC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05378
cell surface receptor signaling pathway	GO Biological Process Annotations 2015	1.0	null
Kidney Chromophobe_KICH_TCGA-KN-8437-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K9me3_Duodenum Smooth Muscle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
molecular_function	GO Molecular Function Annotations 2015	1.0	null
OKAJIMA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.973952
IGR37	CCLE Cell Line Gene CNV Profiles	1.0	1.65818
cervical cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.101975
NCI-H1869	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.956009
posterior (caudal) superior temporal cortex (area 22c)_13 pcw_M_12820	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.896749
PMC7335061-41467_2020_17150_MOESM4_ESM.xlsx-Table_S3-LIN28B_correlates_LIN28B	Rummagene Transcription Factor Associations 2026	1.0	null
H3K9me3_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K27ac_bone marrow macrophage_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
regulation of cellular process	GO Biological Process Annotations 2015	1.0	null
salivary gland	GTEx Tissue Gene Expression Profiles	1.0	1.21363
FOS	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	48.2243
Amylin receptor complex 1	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.587
G protein-coupled receptor, rhodopsin-like	InterPro Predicted Protein Domain Annotations	1.0	null
dorsolateral prefrontal cortex_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.826063
Prostate adenocarcinoma_PRAD_TCGA-J9-A52C-01A-11R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
primary somatosensory cortex (area S1, areas 3,1,2)_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.981721
TE11	CCLE Cell Line Gene CNV Profiles	1.0	1.54967
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-PN-A8MA-01A-11R-A36F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SUM149PT	DepMap CRISPR Gene Dependency	1.0	3.59329
EN1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.3236
HOXB4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.5405
VAX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.8691
myc_00000000_e13dot5_heart_lof_mouse_gpl4865_gse7162	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.762776
NCI-H1693	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.84607
plasma membrane	GO Cellular Component Annotations 2015	1.0	null
Lung adenocarcinoma_LUAD_TCGA-75-5125-01A-01R-1755-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-FS-A1ZK-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
heart	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.22809
Prostate adenocarcinoma_PRAD_TCGA-EJ-5498-01A-01R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
temporal neocortex_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.950092
ROCK_INHIBITION_GDS3944_462_mouse_Forebrain astrocytes - 6 Hours	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
GSE196962_4_v_3_parg_human	RummaGEO Gene Perturbation Signatures	1.0	null
Stat6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	20.3261
H3K9me3_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K9me3_H1-hESC_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Sensory system disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.507
posteroventral (inferior) parietal cortex_16 pcw_M_12879	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.18942
SNU-423	COSMIC Cell Line Gene Mutation Profiles	1.0	null
icSARS-Cov_Day4_None_GSE50000	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	2.28008
PMC12000322-41419_2025_7601_MOESM9_ESM.xlsx-H3122-AR_somatic_filtered_PASS-Unnamed_47_AR	Rummagene Transcription Factor Associations 2026	1.0	null
Kidney Chromophobe_KICH_TCGA-KL-8324-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SW 1417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.06419
Learning disability	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.025
ZNF677	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.4927
Lung squamous cell carcinoma_LUSC_TCGA-21-5782-01A-01R-1635-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cell periphery	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
G protein-coupled receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.149
COLO 678	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10523
LN340	CCLE Cell Line Gene CNV Profiles	-1.0	-1.69764
hypothalamus	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.892654
TMEM88B_KD_GPL10558_471_human_cardiovascular progenitors cells differentiated from hES cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
M/G1 phase-specific MADS box-forkhead transcription factor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.684
Arid5a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	29.0826
H3K9me3_H1 Derived Mesenchymal Stem Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
GSE178714_5_v_7_smad2_human	RummaGEO Gene Perturbation Signatures	1.0	null
Nucleolus organizer region	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.961
Kidney renal papillary cell carcinoma_KIRP_TCGA-B9-A44B-01A-11R-A24Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856258
posterior (caudal) superior temporal cortex (area 22c)_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.826063
Msx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	20.6121
SBC5	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35852
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-VS-A94Z-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H1666	COSMIC Cell Line Gene Mutation Profiles	1.0	null
FOXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.9831
RAX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	53.7114
DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.7065
HT55	DepMap CRISPR Gene Dependency	1.0	2.49617
Nr2e3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	30.087
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
Kidney renal papillary cell carcinoma_KIRP_TCGA-DZ-6135-01A-11R-1965-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
POU1F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.2118
Dmrt1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	37.5241
SRY	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.7143
TGBC52TKB	DepMap CRISPR Gene Dependency	1.0	3.15259
Atf3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	33.366
TLX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.0229
kidney	GTEx Tissue Gene Expression Profiles	-1.0	-1.01235
FOS::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.5372
Mafg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	31.2307
Prostate adenocarcinoma_PRAD_TCGA-CH-5751-01A-11R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.30271
LHX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.4061
regulation of biological process	GO Biological Process Annotations 2015	1.0	null
SW684	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Olfactory transduction	KEGG Pathways 2026	1.0	null
SJCRH30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.29339
BSX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.8513
cortex	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.38901
SK-CO-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
arm	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.396844
posterior (caudal) superior temporal cortex (area 22c)_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.33786
HOXC8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.3229
ventrolateral prefrontal cortex_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.47089
DB	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856258
SNU-175	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HOXB5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.7205
transmembrane signaling receptor activity	GO Molecular Function Annotations 2015	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-J4-A6G1-01A-11R-A311-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF652	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.4086
TAL1::TCF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.8636
ZNF211	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.6751
intrinsic component of membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
tissues, cell types and enzyme sources	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051855
FOXA3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.5279
ACHN	CCLE Cell Line Gene CNV Profiles	-1.0	-1.74456
SUM 149PT	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.67504
CAMA-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.44029
cerebellar cortex_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.13739
cerebralcortex	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.6922
CAKI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856258
H3K9me3_fibroblast of dermis_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
hippocampus (hippocampal formation)_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.14876
FOSL1::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.459
GSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.9952
MKN74	CCLE Cell Line Gene CNV Profiles	-1.0	-1.57202
GATA4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.2845
Prostate adenocarcinoma_PRAD_TCGA-EJ-5512-01A-01R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
detection of chemical stimulus involved in sensory perception of smell	GO Biological Process Annotations 2015	1.0	null
g-protein coupled receptor activity	GO Molecular Function Annotations 2015	1.0	null
Incisor	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.854
ZNF24	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.5666
HGC-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08992
snoutepidermis	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.952944
DMS79	CCLE Cell Line Gene CNV Profiles	-1.0	-1.57499
anterior (rostral) cingulate (medial prefrontal) cortex_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.841285
Nr2e1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	123.843
Stat5b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	35.1938
MDA-MB-435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.11827
LS1034	DepMap CRISPR Gene Dependency	1.0	7.26317
CHP134	DepMap CRISPR Gene Dependency	1.0	4.19796
Sec61 translocon complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.597
MIXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.278
Stat5a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	44.6316
KALS1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.71682
Liver hepatocellular carcinoma_LIHC_TCGA-G3-A25T-01A-11R-A16W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
UNCX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.265
inferolateral temporal cortex (area TEv, area 20)_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.30543
Irf1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	239.875
WEHI-3B cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.294
Neuro D	MotifMap Predicted Transcription Factor Targets	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A7CM-01A-11R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KMS11	DepMap CRISPR Gene Dependency	1.0	3.82573
PMC12000322-41419_2025_7601_MOESM11_ESM.xlsx-H3122_AR_Nonsynonymous_mutation-Hugo_Symbol_AR	Rummagene Transcription Factor Associations 2026	1.0	null
GSE202434,GSE202438_9_v_14_talazoparib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Lymphoma_burkitts(Raji)	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.82276
ONECUT1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.6062
PMC12000322-41419_2025_7601_MOESM11_ESM.xlsx-H3122_AR_Nonsynonymous_mutation-SYMBOL_AR	Rummagene Transcription Factor Associations 2026	1.0	null
Ribonuclease P complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.841
olfactory receptor activity	GO Molecular Function Annotations 2015	1.0	null
ventrolateral prefrontal cortex_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.86088
HT-3	COSMIC Cell Line Gene Mutation Profiles	1.0	null
epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.050889
496100648_PCx_no dementia_no TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.26621
PBX1-22567123-OVCAR3-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
ZNF8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	54.1978
cervical adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.132347
HOXD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.9538
Kidney renal clear cell carcinoma_KIRC_TCGA-A3-3347-01A-02R-1325-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
detection of stimulus involved in sensory perception	GO Biological Process Annotations 2015	1.0	null
697	DepMap CRISPR Gene Dependency	1.0	2.13028
NCI-H2135	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ZNF35	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.8253
Dlx5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.7559
NR4A2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.8938
COLO 853	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.83194
Gata3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	22.8151
primary auditory cortex (core)_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.9238
Lhx8	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.1364
KYSE-510	COSMIC Cell Line Gene Mutation Profiles	1.0	null
macromolecular complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.043085
anterior (rostral) cingulate (medial prefrontal) cortex_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.826063
Lung adenocarcinoma_LUAD_TCGA-55-7994-01A-11R-2187-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZR7530	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.01056
FOXC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	59.8077
KPL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.37918
ventrolateral prefrontal cortex_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.35828
spinalcordupper	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.0806
SU.86.86	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.986312
SKNFI	DepMap CRISPR Gene Dependency	1.0	9.14162
PROP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	73.912
IRF8	ChEA Transcription Factor Targets	1.0	null
signal transducer activity	GO Molecular Function Annotations 2015	1.0	null
Nervous system disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.507
JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.2202
HCC1500	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.38166
H3K9me3_Brain Germinal Matrix	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
amygdaloid complex_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.93158
GATA1_MEL cell line_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Jun	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.0354
CBP-21632823-H3396-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
MEF2C	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	61.6301
small intestine	GTEx Tissue Gene Expression Profiles	-1.0	-1.01235
Sarcoma_SARC_TCGA-DX-AB2P-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
OlfactoryBulb	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.894032
gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051884
Nucleolar chromatin	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.818
Nanog	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	16.1326
SCABER	CCLE Cell Line Gene CNV Profiles	1.0	1.54273
adenocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053018
FOXC1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	150.304
H3K9me3_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
SOX14	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.6571
GSE178714_5_v_4_smad2_human	RummaGEO Gene Perturbation Signatures	1.0	null
anterior (rostral) cingulate (medial prefrontal) cortex_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.21502
Familial partial lipodystrophy type 3	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.038
Dlx2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.2605
Spi1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	77.463
CX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.855172
hippocampus (hippocampal formation)_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.44822
cell type cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.054196
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A45W-01A-11R-A24Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
M040416	DepMap CRISPR Gene Dependency	1.0	2.28766
Prostate adenocarcinoma_PRAD_TCGA-J9-A8CM-01A-11R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RL952	DepMap CRISPR Gene Dependency	1.0	3.51665
HLF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.2792
SU8686	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39197
Nfatc1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	118.851
Expression and translocation of olfactory receptors	Reactome Pathways 2024	1.0	null
SNU-407	COSMIC Cell Line Gene Mutation Profiles	1.0	null
inferolateral temporal cortex (area TEv, area 20)_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.27348
A-Vietnam-1203_CIP048_RG3-2004(H5N1)PB1-F2del_2day-MOI-10^3_None_GSE43302	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.47725
primary visual cortex (striate cortex, area V1/17)_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.05275
H513	COSMIC Cell Line Gene Mutation Profiles	1.0	null
POU5F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.889
Gfi1b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	32.4276
SNU-398	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.84281
ST486	DepMap CRISPR Gene Dependency	1.0	2.00889
HOUAI	DepMap CRISPR Gene Dependency	1.0	2.04141
ALX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.5084
YAPC	CCLE Cell Line Gene CNV Profiles	-1.0	-1.79946
GSE178714_3_v_2_smad2_human	RummaGEO Gene Perturbation Signatures	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-HT-7686-01A-11R-2256-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
STAT3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.6209
ventrolateral prefrontal cortex_37 yrs_M_12303	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.00825
HOXD8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.3585
SNU475	CCLE Cell Line Gene CNV Profiles	1.0	1.98326
Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-A4CD-01A-21R-A24Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FOSL2::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.6626
IRF8-21731497-J774-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
Prdm5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	40.6419
NCI-H2126	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GSE202434,GSE202438_10_v_14_talazoparib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EX-A8YF-01A-11R-A37O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
urogenital system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054844
TE10	DepMap CRISPR Gene Dependency	1.0	6.65709
Overnutrition	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.303
MAFF_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Nobox	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	19.4737
PECAPJ34CLONEC12	DepMap CRISPR Gene Dependency	1.0	2.62272
POU3F4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	64.2823
RAMOS-2G6-4C10	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CAL-29	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Uterine Carcinosarcoma_UCS_TCGA-N9-A4Q7-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
urinary system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.061571
BNC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.9795
LMX1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.3049
UMUC3	DepMap CRISPR Gene Dependency	1.0	2.295
Prostate adenocarcinoma_PRAD_TCGA-V1-A8WW-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Dyslexia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.242
GBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.3402
SF295	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35093
496100418_TCx_no dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.00899
NCI-H2110	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Mesothelioma_MESO_TCGA-MQ-A6BL-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.7465
YMB-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.27428
striatum_16 pcw_M_12879	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.985337
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-HM-A3JK-01A-11R-A32Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NR6A1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.3053
PMC12000322-41419_2025_7601_MOESM9_ESM.xlsx-H3122-AR_somatic_filtered_PASS-version_2_4_AR	Rummagene Transcription Factor Associations 2026	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-FV-A2QR-11A-11R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Reading disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.237
FOSL2::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.1952
FOSL2::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.0982
KYSE-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.60249
Chromosome 2p16.1-p15 deletion syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.349
BT20	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.675437
forelimb	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.108355
NCI-H727	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.43589
Rectum adenocarcinoma_READ_TCGA-DC-5869-01A-01R-1660-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GPCR downstream signaling	Reactome Pathways 2014	1.0	null
H3K4me1_bone marrow macrophage_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
NUGC-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.847925
HCC1395	CCLE Cell Line Gene CNV Profiles	1.0	1.46734
Sarcoma_SARC_TCGA-QQ-A5VA-01A-12R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.4348
Supraspliceosomal complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.331
Vdr	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	27.5576
supraspliceosomal complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.84019
Bhlha15	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	24.3117
amygdaloid complex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.41208
20174566-TableS1	GeneSigDB Published Gene Signatures	1.0	null
Sarcoma_SARC_TCGA-HS-A5N7-01A-21R-A26T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HUH7	CCLE Cell Line Gene CNV Profiles	1.0	1.40376
HUH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.12626
TEAD1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.6986
primary auditory cortex (core)_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.45155
DLX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.2971
EMX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.3808
PMC10115638-41591_2023_2255_MOESM4_ESM.xlsx-LGG_MYB_L1_deletions-Unnamed_2_MYB	Rummagene Transcription Factor Associations 2026	1.0	null
NCI-H1838	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-3.64461
Disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.127
disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.03933
HCC33	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.60703
BT549	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.922125
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.02869
G111	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.986312
spliceosomal complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.665962
NCI-H2030	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.92524
NUGC-3	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GSE160817_7_v_9_slamf6_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-A6V1-01A-12R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
T-47D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26286
LP1	DepMap CRISPR Gene Dependency	1.0	3.41442
MEC1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.84579
detection of stimulus	GO Biological Process Annotations 2015	1.0	null
primary visual cortex (striate cortex, area V1/17)_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.73077
FOXO6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.8271
Olfactory receptor	InterPro Predicted Protein Domain Annotations	1.0	null
Disease of metabolism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.063
FOXA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.8509
496100667_TCx_no dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.49392
Bach1::Mafk	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	39.8421
HDL cholesterol levels in current drinkers	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.969897
Six3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	21.1251
Eye disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.507
dorsolateral prefrontal cortex_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.37445
NOMO-1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.652
anterior (rostral) cingulate (medial prefrontal) cortex_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.11223
Prostate adenocarcinoma_PRAD_TCGA-CH-5754-01A-11R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cellular_component	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041487
Rectum adenocarcinoma_READ_TCGA-G5-6235-01A-11R-1736-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TP73	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.6254
POU2F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	84.8802
HNF1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.0464
DUX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.6345
DUXA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	59.0127
RPMI 8226	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26286
KARPAS1718	DepMap CRISPR Gene Dependency	1.0	2.19662
GSE178714_6_v_2_smad2_human	RummaGEO Gene Perturbation Signatures	1.0	null
anterior (rostral) cingulate (medial prefrontal) cortex_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.62738
Liver hepatocellular carcinoma_LIHC_TCGA-GJ-A3OU-01A-31R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Sox11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	41.9078
SK-MEL-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15119
NKX6-2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.9091
EVX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.745
GSE178714_6_v_0_smad2_human	RummaGEO Gene Perturbation Signatures	1.0	null
GSE193258,GSE193259_9_v_12_osimertinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
HDL cholesterol levels	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.522185
POU6F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.5026
ARGFX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.9976
H3K9me3_H1	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
limb	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.097937
Rarb	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	61.9315
NCI-H520	COSMIC Cell Line Gene Mutation Profiles	1.0	null
EN2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.5817
Sox17	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	38.9659
SIRT3_KO_GDS4817_416_mouse_liver	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
receptor activity	GO Molecular Function Annotations 2015	1.0	null
SK-MEL-5	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MNX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.587
GATA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.1005
MEOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.6277
BFTC-909	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.98365
A-673	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48451
PBX1-22567123-OVCAR3-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
primary visual cortex (striate cortex, area V1/17)_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.872641
CAL29	DepMap CRISPR Gene Dependency	1.0	3.42748
SAP30	ENCODE Transcription Factor Targets	1.0	null
NCI-H820	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05526
detection of chemical stimulus	GO Biological Process Annotations 2015	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-E1-A7YJ-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE193258,GSE193259_5_v_14_osimertinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
POU2F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	68.1969
BARX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.0683
HELA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.44029
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4343-01A-02R-1289-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-E1-5304-01A-01R-1470-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H358	COSMIC Cell Line Gene Mutation Profiles	1.0	null
H3K9me3_fibroblast of lung_hg19_3	ENCODE Histone Modification Site Profiles	1.0	null
NCIH1792	CCLE Cell Line Gene CNV Profiles	1.0	2.39897
MEIS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.9328
VSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.8638
Stat4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	52.0111
MSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.4384
POU5F1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	66.4163
inferolateral temporal cortex (area TEv, area 20)_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.00825
Synovial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.79
Prdm15	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	28.8377
cell part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
Brain Lower Grade Glioma_LGG_TCGA-FG-5963-02A-12R-A29R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MDA-MB-330	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00965
pituitary	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.978589
spleen	GTEx Tissue Gene Expression Profiles	1.0	1.12315
NCI-H2291	COSMIC Cell Line Gene Mutation Profiles	1.0	null
WIDR	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856258
MCC13	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H1651	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00965
JHH5	DepMap CRISPR Gene Dependency	1.0	3.92861
PrefrontalCortex	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.999714
Sox6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	45.2932
Liver hepatocellular carcinoma_LIHC_TCGA-K7-A5RG-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZBED1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.2131
Arid3a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	19.7778
MEHMO syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.284
GSE151612_0_v_3_pracinostat_human	RummaGEO Drug Perturbation Signatures	-1.0	null
retina	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.849519
NCI-H920	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.42115
biological regulation	GO Biological Process Annotations 2015	1.0	null
KYSE-410	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GSE193258,GSE193259_9_v_15_osimertinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
LBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.0119
KYSE520	CCLE Cell Line Gene CNV Profiles	1.0	1.64179
fertilizedegg	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.51216
H3K9me3_CH12.LX_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-VN-A88R-01A-11R-A36G-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SOX15	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.7762
hippocampus (hippocampal formation)_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.841285
LMX1A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.2441
NCIH841	CCLE Cell Line Gene CNV Profiles	1.0	1.70263
integral component of membrane	GO Cellular Component Annotations 2015	1.0	null
COLO201	CCLE Cell Line Gene CNV Profiles	1.0	2.10172
Acquired metabolic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.265
Prostate adenocarcinoma_PRAD_TCGA-KK-A59X-01A-11R-A29R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Nfe2l2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	36.77
Lung adenocarcinoma_LUAD_TCGA-49-6767-01A-11R-1858-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A702-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Olfactory organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.89
anterior (rostral) cingulate (medial prefrontal) cortex_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.78301
EVSA-T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.955424
Sox3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	28.0105
PMC12000322-41419_2025_7601_MOESM11_ESM.xlsx-H3122_AR_Nonsynonymous_mutation-Gene_AR	Rummagene Transcription Factor Associations 2026	1.0	null
NCIH727	CCLE Cell Line Gene CNV Profiles	1.0	1.51388
SNU5	DepMap CRISPR Gene Dependency	1.0	2.20389
TKKK	DepMap CRISPR Gene Dependency	1.0	2.22393
SUM225CWN	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.978911
disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.040256
signal transduction	GO Biological Process Annotations 2015	1.0	null
posterior (caudal) superior temporal cortex (area 22c)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.13597
Photoreceptor proximal connecting cilium	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.931
NCCMPNST2C1	DepMap CRISPR Gene Dependency	1.0	2.04851
HNF4A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	64.5032
pronephros	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.668843
FOS::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.3059
HS578T	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.08262
KMM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.922951
PC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.06507
HCC1569	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	2.40471
H3K9me3_Peripheral Blood Mononuclear Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
CAR-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.38525
HOXA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.5692
Elf5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	210.842
RBPJ-21746931-IB4-LCL-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Ppara	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	16.5984
Kidney renal papillary cell carcinoma_KIRP_TCGA-2Z-A9J5-01A-21R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Sarcoma_SARC_TCGA-DX-A23Z-01A-11R-A27Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HGC-27	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GSE178714_1_v_4_smad2_human	RummaGEO Gene Perturbation Signatures	1.0	null
HUH7	DepMap CRISPR Gene Dependency	1.0	4.458
membrane	LOCATE Predicted Protein Localization Annotations	1.0	null
HOXD4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.4618
Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A3B7-01A-31R-A20F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
dorsolateral prefrontal cortex_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.878531
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-MA-AA42-01A-12R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Shox2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	20.3696
ESO51	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GATA1	ENCODE Transcription Factor Targets	1.0	null
MXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.3071
GlobusPallidus	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.939619
HCC2998	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Nfatc2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	135.487
posteroventral (inferior) parietal cortex_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.29678
Glaucoma	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.507
GSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.3073
PAX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.9787
NCI-H28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.30271
DU-145	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PMC10115638-41591_2023_2255_MOESM4_ESM.xlsx-HGG_MYCN_deletions-Unnamed_6_MYCN	Rummagene Transcription Factor Associations 2026	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-P5-A5EX-01A-12R-A28M-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Foxj3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	37.5354
dorsolateral prefrontal cortex_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.06692
GSE239844_8_v_5_crizotinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.80365
HDL cholesterol levels x alcohol consumption (regular vs non-regular drinkers) interaction (2df)	GWAS Catalog SNP-Phenotype Associations 2025	1.0	1.6699
MM127	DepMap CRISPR Gene Dependency	1.0	2.82959
LBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.925
HOXA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.9072
496100373_PCx_no dementia_no TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	10.3966
orbital frontal cortex_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.841285
SNU869	CCLE Cell Line Gene CNV Profiles	1.0	1.37847
EJM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12013
Lung adenocarcinoma_LUAD_TCGA-38-4629-01A-02R-1206-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KML1	DepMap CRISPR Gene Dependency	1.0	3.62124
membrane part	GO Cellular Component Annotations 2015	1.0	null
NCI-H1930	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.986312
SIHA	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HESX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.4757
hand	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.450657
posteroventral (inferior) parietal cortex_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.54381
cerebellar cortex_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.00226
Prostate adenocarcinoma_PRAD_TCGA-KK-A59V-01A-11R-A29R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K4me3_H1 BMP4 Derived Mesendoderm Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
NKX3-1	JASPAR Predicted Transcription Factor Targets	1.0	null
HOXB3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.6559
g-protein coupled receptor signaling pathway	GO Biological Process Annotations 2015	1.0	null
SRF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.1161
SOX18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.9224
SN12C	COSMIC Cell Line Gene Mutation Profiles	1.0	null
excretory gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.058244
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A1MF-01A-11R-A13Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TRPS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.7729
FOSB::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.6148
SOX2-21211035-LN229-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Sarcoma_SARC_TCGA-3B-A9HJ-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
LHX9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.4572
striatum_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.872641
MCF12A	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.634459
928 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.919164
Lung adenocarcinoma_LUAD_TCGA-75-5126-01A-01R-1755-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
pyrazinamide_mus musculus_gpl6246_gse48027	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
olfactory receptor activity	GO Molecular Function Annotations 2025	1.0	null
integument	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.050575
Heart	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.49079
Pancreatic adenocarcinoma_PAAD_TCGA-IB-AAUN-01A-12R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-LP-A4AX-01A-12R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
G22	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23284
brownfat	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.1252
POLR2A	ENCODE Transcription Factor Targets	1.0	null
17823238-TableS5	GeneSigDB Published Gene Signatures	1.0	null
posterior (caudal) superior temporal cortex (area 22c)_23 yrs_M_12300	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.07503
H3K9me3_CH12.LX_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
plasma membrane	LOCATE Predicted Protein Localization Annotations	1.0	null
FOXA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.8367
cerebellar cortex_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.45155
SNU449	DepMap CRISPR Gene Dependency	1.0	2.84458
FOXB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	181.666
primary somatosensory cortex (area S1, areas 3,1,2)_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.89789
PBX1	ChEA Transcription Factor Targets	1.0	null
Olfactory cortex	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.569
FADU	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-IB-A7M4-01A-11R-A36G-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BACH2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.7008
NCI-H1581	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SAP30_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-HT-A5RA-01A-11R-A28M-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TP53	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.3578
FOXD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	112.028
EBC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.20624
COLO 201	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.06507
internal female genital organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.056534
NCI-H1563	COSMIC Cell Line Gene Mutation Profiles	1.0	null
POU2F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	89.271
Prostate adenocarcinoma_PRAD_TCGA-VP-A872-01A-11R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KYSE30	CCLE Cell Line Gene CNV Profiles	1.0	2.39455
cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.040661
CardiacMyocytes	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-2.52382
Liver hepatocellular carcinoma_LIHC_TCGA-K7-AAU7-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Mafb	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	46.0335
primary visual cortex (striate cortex, area V1/17)_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.91678
HARA	COSMIC Cell Line Gene Mutation Profiles	1.0	null
primary visual cortex (striate cortex, area V1/17)_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.45155
striatum_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.53243
NFIL3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.6618
CAL78	CCLE Cell Line Gene CNV Profiles	1.0	1.4645
PMC10247733-41408_2023_863_MOESM4_ESM.pdf-574-ZSCAN1_ZSCAN1	Rummagene Transcription Factor Associations 2026	1.0	null
RCOR1	ChEA Transcription Factor Targets	1.0	null
animal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052066
RARA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	49.5612
FOXO1::ELK3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.5287
HOXA3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.6681
SUM1315MO2	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.58101
medial ganglionic eminence_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.77564
Pheochromocytoma and Paraganglioma_PCPG_TCGA-SR-A6MQ-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NR1I3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.8588
H3K9me3_keratinocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052678
organism form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.058111
FOXP4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.6599
HDL cholesterol levels x alcohol consumption (drinkers vs non-drinkers) interaction (2df)	GWAS Catalog SNP-Phenotype Associations 2025	1.0	1.80969
THRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	61.8663
kidney cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.354084
Choriodecidua	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.726
plasma membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
HUP-T4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.37955
TCF7L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.2958
Liver hepatocellular carcinoma_LIHC_TCGA-EP-A2KA-01A-11R-A180-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CH-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.151
GSE193258,GSE193259_2_v_14_osimertinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
MSC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.6534
Glycogen storage disease III	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.025
SUM159PT	DepMap CRISPR Gene Dependency	1.0	3.97149
Erg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	121.479
NCIH1568	CCLE Cell Line Gene CNV Profiles	1.0	1.34575
HOXA5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.2878
PANC 03.27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.922951
ICC106	DepMap CRISPR Gene Dependency	1.0	2.02583
PPARD	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.0819
organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.043411
Prostate adenocarcinoma_PRAD_TCGA-FC-A6HD-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
open-angle glaucoma	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.507
GSE178714_1_v_0_smad2_human	RummaGEO Gene Perturbation Signatures	1.0	null
Nutrition disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.298
NCI-H1155	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H2073	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.99832
Prostate adenocarcinoma_PRAD_TCGA-J9-A52E-01A-11R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
breast	GTEx Tissue Gene Expression Profiles	-1.0	-1.01235
viscus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052344
PDX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.4918
Acute Myeloid Leukemia_LAML_TCGA-AB-3005-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
epithelial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053144
Amylin receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.498
Pparg::Rxra	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	55.5191
SJRH30	CCLE Cell Line Gene CNV Profiles	1.0	1.34655
MEF2D	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	63.2249
Hmga1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	62.2945
NKX6-1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.9666
Stat2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	155.856
CEBPG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.8993
H3K9me3_Mobilized CD34 Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
MEF2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.0061
ATF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.6069
Signaling by GPCR	Reactome Pathways 2014	1.0	null
NCI-H441	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MEIS2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.7109
RCOR1-19997604-NEURONS-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
cellular_component	GO Cellular Component Annotations 2015	1.0	null
Bcl11b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.8188
GSE57397,GSE57399_1_v_0_fbxw7_human	RummaGEO Gene Perturbation Signatures	1.0	null
496100347_PCx_no dementia_no TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	8.92942
IGR39	CCLE Cell Line Gene CNV Profiles	1.0	1.50987
PAX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.8412
POU3F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.4664
SOX10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.6268
NCI-H1793	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H1395	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.43589
ZIM3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.8355
Dlx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.6847
KYSE-520	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.38632
Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A5BS-01A-21R-A26T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE178714_6_v_4_smad2_human	RummaGEO Gene Perturbation Signatures	1.0	null
FOXS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.7754
FOSL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.3482
FOXO1::ELF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.7581
Ascl2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	27.6877
FOSL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.2698
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4638-01A-02R-1325-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
posterior (caudal) superior temporal cortex (area 22c)_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.22515
CEBPA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.0023
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-MY-A5BE-01A-21R-A26T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-85-8584-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FOS::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.2727
Prostate adenocarcinoma_PRAD_TCGA-EJ-A8FP-01A-21R-A36G-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Borjeson-Forssman-Lehmann syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.1
Dlx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	19.0718
A-427	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.922951
DMS 273	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.84281
pituitary	GTEx Tissue Gene Expression Profiles	-1.0	-1.01235
FLI1::FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.5981
Kidney Chromophobe_KICH_TCGA-KL-8331-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H146	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ventrolateral prefrontal cortex_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.970117
Lhx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	14.8697
FOXD2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	56.4124
BARX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.3601
Atoh1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	56.0731
Brain Lower Grade Glioma_LGG_TCGA-P5-A5EU-01A-11R-A27Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FOXJ2::ELF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.2278
E2F1	ChEA Transcription Factor Targets	1.0	null
PPARA::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.1323
Liver	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.23082
SNU-475	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.54146
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.987316
Liver hepatocellular carcinoma_LIHC_TCGA-2V-A95S-01A-11R-A37K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZBTB32	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.3804
HOXC4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1353
Lung adenocarcinoma_LUAD_TCGA-73-4666-01A-01R-1206-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RBPJ-21746931-IB4-LCL-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
PHOX2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	74.9004
orbital frontal cortex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.17096
Rectum adenocarcinoma_READ_TCGA-AF-2687-01A-02R-1736-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RAX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.2181
DAN-G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12013
ETV2::HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.1776
BHY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.882123
Lung adenocarcinoma_LUAD_TCGA-95-8494-01A-11R-2326-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HOXB7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.6645
TP63	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	49.1271
cerebellum_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.73686
Acute Myeloid Leukemia_LAML_TCGA-AB-2860-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MV411	DepMap CRISPR Gene Dependency	1.0	2.09544
Lung squamous cell carcinoma_LUSC_TCGA-39-5011-01A-01R-1443-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HS 936.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.1257
PHOX2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	61.3757
FOXP3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.0726
FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.2318
integral component of membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
Sarcoma_SARC_TCGA-DX-A3UA-01A-12R-A30C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
biological_process	GO Biological Process Annotations 2015	1.0	null
HCC1319	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.84281
kidney	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.065133
MEWO	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HCC1937	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.10974
Rectum adenocarcinoma_READ_TCGA-F5-6465-01A-11R-1736-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
E2F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.6107
Dmbx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	19.4025
NCI-H716	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.15957
F5	DepMap CRISPR Gene Dependency	1.0	2.24489
FOXH1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.996
Sarcoma_SARC_TCGA-DX-A3LU-01A-11R-A21T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CCLFPEDS0003T	DepMap CRISPR Gene Dependency	1.0	2.55051
nuclear part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.050232
NCI-H345	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Ovary	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.84071
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A39Y-01A-11R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE178714_6_v_7_smad2_human	RummaGEO Gene Perturbation Signatures	1.0	null
LHX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.4686
LN18	CCLE Cell Line Gene CNV Profiles	-1.0	-1.54874
NSL complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.693
Olfactory Signaling Pathway	Reactome Pathways 2014	1.0	null
embryonic stem feeder layer	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.47214
TE4	CCLE Cell Line Gene CNV Profiles	1.0	2.11677
gfi1b_22201127_amulv_gof_mouse_gpl6246_gds4302	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.426464
ZR-75-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.51887
RI1	DepMap CRISPR Gene Dependency	1.0	2.09622
PDX1	JASPAR Predicted Transcription Factor Targets	1.0	null
adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.057215
Disease of anatomical entity	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.507
PBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.152
KYSE-270	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GSE151612_0_v_2_pracinostat_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE151612_0_v_7_pracinostat_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE178714_3_v_4_smad2_human	RummaGEO Gene Perturbation Signatures	1.0	null
female reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053737
Obesity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.304
HOXA7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.939
Stat5a::Stat5b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	39.0437
Thymus	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.936091
RBPJ	ChEA Transcription Factor Targets	1.0	null
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08992
H3K9me3_Brain Hippocampus Middle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
MEOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.7877
Sox5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	30.9677
BFTC-905	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.50861
MDAMB453	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.753453
carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052007
Olfactory glomerulus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.933
Six4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	16.1708
GATA1::TAL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.4061
Pheochromocytoma and Paraganglioma_PCPG_TCGA-RW-A688-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
embryonic cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.276846
TEAD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.6937
Preterm premature rupture of the membranes	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.126
GSE178714_5_v_2_smad2_human	RummaGEO Gene Perturbation Signatures	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EX-A69L-01A-11R-A32P-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-BA-4074-01A-01R-1436-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
EMX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.6961
JHESOAD1	DepMap CRISPR Gene Dependency	1.0	2.13993
MAFF	ENCODE Transcription Factor Targets	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B2-5639-01A-01R-1541-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4712-01A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Signal Transduction	Reactome Pathways 2014	1.0	null
HCC1011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04429
embryonic kidney cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.594853
uterus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.069755
496100630_PCx_no dementia_no TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.26091
GSE143406_1_v_0_carfilzomib_human	RummaGEO Drug Perturbation Signatures	1.0	null
ISL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.4501
Kidney renal papillary cell carcinoma_KIRP_TCGA-G7-A8LD-01A-11R-A36F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MHHES1	DepMap CRISPR Gene Dependency	1.0	7.36592
SNU-1040	COSMIC Cell Line Gene Mutation Profiles	1.0	null
membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
detection of chemical stimulus involved in sensory perception	GO Biological Process Annotations 2015	1.0	null
PMC3919509-NIHMS471461-supplement-3.xls-Table_S1-TP53_TP53	Rummagene Transcription Factor Associations 2026	1.0	null
cervical cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.105053
H3K9me3_HeLa-S3_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
PRRX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.5179
Mixed gonadal dysgenesis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.052
Hypopharynx cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.158
HMC18	CCLE Cell Line Gene CNV Profiles	-1.0	-2.03492
ESX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.3224
496100615_HIP_possible Alzheimer's disease_no TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	6.6733
Mitochondrial inner membrane assembly complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.066
Neurod2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	47.5599
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A2M1-01A-11R-A18M-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE130956_2_v_1_icaritin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
5637	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HUH-7	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Ikzf3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.6619
G112	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.84281
blood	GTEx Tissue Gene Expression Profiles	1.0	0.97869
FOXP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.5355
SOX9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.6842
POU3F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	77.4677
Kidney Chromophobe_KICH_TCGA-KL-8330-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KNS42	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32338
Foxl2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.5573
FOXK1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.5038
NCC010	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SARS-BatSRBD_Day4_None_GSE50000	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.8807
posteroventral (inferior) parietal cortex_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.04163
NR4A1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.5714
NCI-H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.80365
TOV-112D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01559
EFM-192A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16119
ZR-75-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.27485
VAX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.8037
membrane part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
NCI-H358	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles	1.0	null
hek-293 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.596058
uterine cervix	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.283545
finger	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.451813
olfactorybulb	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.30311
GR-ST	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H1568	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.93083
whole body	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052067
dorsolateral prefrontal cortex_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.17277
NB10	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5706-01A-11R-1541-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
orbital frontal cortex_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.62505
ES-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
FOXO4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.9697
Ar	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	34.4492
TMEM88_KD_GSE43805_682_human_hES cells differentiated along the cardiac lineage	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
SHMAC5	DepMap CRISPR Gene Dependency	1.0	5.13239
FOXE1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	95.4334
Chromosome 3q29 microdeletion syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.35
epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051859
WRL-68 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.768
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
amygdaloid complex_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.18992
PMC12000322-41419_2025_7601_MOESM9_ESM.xlsx-H3122-AR_somatic_filtered_PASS-Unnamed_60_AR	Rummagene Transcription Factor Associations 2026	1.0	null
urinary tract	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.061211
Liver hepatocellular carcinoma_LIHC_TCGA-2Y-A9GY-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-66-2768-01A-01R-0851-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE193258,GSE193259_9_v_0_osimertinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A4NQ-01A-21R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2978-03A-01T-0734-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K9me3_H9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
GSE223893_1_v_10_setd2_human	RummaGEO Gene Perturbation Signatures	-1.0	null
OVISE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00965
GSE178714_3_v_0_smad2_human	RummaGEO Gene Perturbation Signatures	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-DU-A7TA-01A-11R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KYSE-450	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.843644
PA-TU-8988T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.06419
KPL1	DepMap CRISPR Gene Dependency	1.0	2.30984
ZNF354A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	134.031
SJSA1	DepMap CRISPR Gene Dependency	1.0	4.16087
Acute Myeloid Leukemia_LAML_TCGA-AB-2857-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
LNCAP-CLONE-FGC	COSMIC Cell Line Gene Mutation Profiles	1.0	null
EOMES_OE_GDS5077_65_human_RUES2	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
primary auditory cortex (core)_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.24734
membrane	GO Cellular Component Annotations 2015	1.0	null
primary visual cortex (striate cortex, area V1/17)_37 yrs_M_12303	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.13739
H3K9me3_CD8 Naive Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
POU4F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	55.5368
GSE178714_1_v_7_smad2_human	RummaGEO Gene Perturbation Signatures	1.0	null
MSL complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.946
MOLM6	CCLE Cell Line Gene CNV Profiles	-1.0	-2.63033
GATA6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.0658
Prostate adenocarcinoma_PRAD_TCGA-KK-A6E6-01A-11R-A311-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SOX21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.3741
Obesity	HuGE Navigator Gene-Phenotype Associations	1.0	null
HOXB2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.6252
FOXC1	JASPAR Predicted Transcription Factor Targets	1.0	null
SUM 229PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.12626
POU4F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	72.5727
ventrolateral prefrontal cortex_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.01883
intrinsic component of membrane	GO Cellular Component Annotations 2015	1.0	null
papillary carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.14857
Lung adenocarcinoma_LUAD_TCGA-55-6712-01A-11R-1858-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.507
anterior (rostral) cingulate (medial prefrontal) cortex_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.59892
embryo	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.064053
MAX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.6505
MDA-MB-175-VII	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.54458
GSE178714_3_v_7_smad2_human	RummaGEO Gene Perturbation Signatures	1.0	null
A427	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Nr2f6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	99.1217
iron-sulfur cluster transfer complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.852
Arid3b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	31.9875
Hnf1a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	33.4452
PK-59	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.37971
MEF2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	64.4877
NOTO	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.1812
SHOX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.9892
signaling receptor activity	GO Molecular Function Annotations 2015	1.0	null
amygdaloid complex_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.18942
Nfat5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	148.542
HOXA6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.1917
Mecom	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	428.778
HOXB6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.008