association dataset threshold value standardized value mantle zone of VTTh Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.72386 intermediate stratum of r3BL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.9525 SNU-81 COSMIC Cell Line Gene CNV Profiles 1.0 2.06626 inner CP in dorsomedial parietal cortex (area 7m) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.0267 TET1-21451524-MESC-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null NCIH196 CCLE Cell Line Gene CNV Profiles 1.0 1.41781 posterior triangular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.10991 PANC1 DepMap CRISPR Gene Dependency 1.0 4.29723 HSF1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 24.7596 NCI-H2804 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.953747 ECGI10 DepMap CRISPR Gene Dependency 1.0 6.71273 BACH2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 48.3361 Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4813-01A-01R-1277-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SATB1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 34.6105 CTCF_SK-N-SH_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Olfactory Signaling Pathway Reactome Pathways 2024 1.0 null NCI-H2171 COSMIC Cell Line Gene CNV Profiles 1.0 2.06626 RBBP5_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null middle frontal gyrus, right, superior bank of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.907798 COR-L311 COSMIC Cell Line Gene CNV Profiles -1.0 -3.44027 EMX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 35.34 reticular nucleus of thalamus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.35891 NCI-H1993 COSMIC Cell Line Gene Mutation Profiles 1.0 null MDAMB436 DepMap CRISPR Gene Dependency 1.0 3.43576 intermediate stratum of r4Ve Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.0274 Anteromedial visual area, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.29765 CTCF_GM12865_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CALU-6 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.940741 Gata3 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 29.1851 Head and Neck squamous cell carcinoma_HNSC_TCGA-DQ-7591-01A-11R-2081-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Irf1 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 42.0902 CTCF_K562_hg19_7 ENCODE Transcription Factor Binding Site Profiles 1.0 null layer II of caudal entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.22276 Kidney renal papillary cell carcinoma_KIRP_TCGA-A4-8311-01A-11R-2404-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Posterior amygdalar nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.53787 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7418-01A-11R-2081-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TEF-1 MotifMap Predicted Transcription Factor Targets 1.0 null superficial stratum of r2Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.54004 rostral subdivision of medial nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.23043 CASKI DepMap CRISPR Gene Dependency 1.0 3.65249 HDAC2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null intermediate stratum of p2Lim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.48778 Prostate adenocarcinoma_PRAD_TCGA-EJ-8468-01A-21R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cell COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 CAL-85-1 COSMIC Cell Line Gene CNV Profiles 1.0 2.06626 CTCF_GM12867_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_cardiac muscle cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Infralimbic area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.15179 dorsal subdivision of VLC Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.864917 Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5888-01A-11R-1592-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PMC10809117-mmc1.pdf-2-NR1H4_NR1H4 Rummagene Transcription Factor Associations 2026 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-CC-5261-01A-01R-A131-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null EN2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.6557 ZNF143_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Prostate adenocarcinoma_PRAD_TCGA-HC-8257-01A-11R-2263-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null facial motor nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.976853 Retrosplenial area, lateral agranular part, layer 6b Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.06005 FOXA2 ENCODE Transcription Factor Targets 1.0 null BICR 31 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.35915 K562 DepMap CRISPR Gene Dependency 1.0 2.02324 Chromosome 2p16.1-p15 deletion syndrome DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.538 496100454_FWM_no dementia_TBI_88_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 4.75221 FOXA1-27270436-CHIP-SEQ-PROSTATE-HUMAN ChEA Transcription Factor Targets 2022 1.0 null substantia nigra, pars reticulata, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.07973 inferior olive, medial nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.37169 M059K Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.2788 olfactory bulb Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -2.6312 septopallidal part of the olfactory tuberculum Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.26368 CTCF_HEK293_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RAD21 ENCODE Transcription Factor Targets 1.0 null r7 part of rostral ventromedial reticular area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.07287 inner CP in temporal polar cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.926287 CTCF_GM12865_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PK-8 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.35851 CTCF_fibroblast of pedal digit skin_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GSE171177,GSE171181_1_v_0_e7107_human RummaGEO Drug Perturbation Signatures 1.0 null RPMI2650 DepMap CRISPR Gene Dependency 1.0 6.8479 GSE160817_4_v_6_slamf6_human RummaGEO Gene Perturbation Signatures -1.0 null TP53 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 27.8014 Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4828-01A-01R-1277-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Vascular smooth muscle cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.531 BACH1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.1859 HOXA10 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 27.7738 rostral ventral respiratory cell group Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.25713 CTCF_GM12871_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HDAC1 ENCODE Transcription Factor Targets 1.0 null MPNST724 DepMap CRISPR Gene Dependency 1.0 2.13923 Amylin receptor complex 2 COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 1.017 trochlear nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.03278 r10 part of the vestibular column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.1851 A-Vietnam-1203_CIP048_RG4-2004(H5N1)NS1trunc124_2day-MOI-10^3_None_GSE44445 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 1.66316 membrane part GO Cellular Component Annotations 2015 1.0 null NCI-H1092 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.00455 Folium-tuber vermis (VII), molecular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.1417 inner SZ in ventromedial extrastriate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.875568 anterior hypothalamic nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.05673 r7 part of paragigantocellular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.03321 EZH2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null superficial stratum of AOD Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.12494 COR-L279 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.893021 Intergeniculate leaflet of the lateral geniculate complex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.02568 superficial stratum of PHyB-V Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.18262 IZ in posteroinferior (ventral) parietal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.15684 CTCF_astrocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null FOXA1_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null YY1 MotifMap Predicted Transcription Factor Targets 1.0 null MZ in dorsomedial parietal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.16303 dorsal motor nucleus of the vagus (vagal nucleus) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.68672 Principal sensory nucleus of the trigeminal Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.73017 SW684 COSMIC Cell Line Gene Mutation Profiles 1.0 null MZ in dorsomedial extrastriate cortex (V2) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.916075 GSE146982_7_v_5_gpd1_human RummaGEO Gene Perturbation Signatures -1.0 null 537 MEL Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.27541 GSC2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 13.4887 tissues, cell types and enzyme sources TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 1.0 2.095 Amylin receptor complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.728 CTCF_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null globose nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.931543 FOXD2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 55.7674 Folium-tuber vermis (VII), granular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.19469 IM-95 COSMIC Cell Line Gene Mutation Profiles 1.0 null salivary gland GTEx Tissue Gene Expression Profiles -1.0 -1.35622 VZ in dorsomedial parietal cortex (area 7m) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.63242 HOXB7 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.8556 HOXB2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.5975 ventral subnucleus of MG Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.35419 intergeniculate leaflet Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.32709 RAD21_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PMC9950457-mmc3.xlsx-GRHL2_binding_sites-RBBP8NL_GRHL2 Rummagene Transcription Factor Associations 2026 1.0 null subgenual (subcallosal) division of MFC (area 25) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.29539 olfactory receptor activity GO Molecular Function Annotations 2015 1.0 null MYCN ChEA Transcription Factor Targets 1.0 null HOXA2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 26.2141 CTCF_GM12867_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null r2 part of trigeminal sensory column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.74614 MG-63 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.867478 Head and Neck squamous cell carcinoma_HNSC_TCGA-BB-4224-01A-01R-1436-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null EN1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 34.3952 dorsal lateral geniculate nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.51232 CTCF_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null UPMD1 DepMap CRISPR Gene Dependency 1.0 4.10444 MDA-MB-468 COSMIC Cell Line Gene Mutation Profiles 1.0 null GR-ST COSMIC Cell Line Gene Mutation Profiles 1.0 null POU3F2-20337985-501MEL-HUMAN ChEA Transcription Factor Targets 2022 1.0 null CTCF_fibroblast of gingiva_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null RAD21_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CJUN-26792858-CHIP-SEQ-BT549-HUMAN ChEA Transcription Factor Targets 2022 1.0 null Primary visual area, layer 5 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.52838 MAFF_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-DW-5561-01A-01R-1592-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SOX18 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.7911 HCC2885 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.02665 CTCF_fibroblast of lung_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null HDAC2 ENCODE Transcription Factor Targets 1.0 null TUHR4TKB DepMap CRISPR Gene Dependency 1.0 2.10966 Medial geniculate complex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.2272 CTCF_Caco-2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_skeletal muscle myoblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null detection of chemical stimulus involved in sensory perception of smell GO Biological Process Annotations 2015 1.0 null membrane part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.098109 U251MG DepMap CRISPR Gene Dependency 1.0 3.4883 intermediate stratum of r4BL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.66544 Brain Lower Grade Glioma_LGG_TCGA-FG-5965-01B-11R-1896-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-DW-5560-01A-01R-1592-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Brain Lower Grade Glioma_LGG_TCGA-S9-A7J0-01A-11R-A34F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null r7 part of the dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.2473 anterior orbital gyrus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.28091 GSE144120_3_v_1_plcg2_human RummaGEO Gene Perturbation Signatures 1.0 null SNU-398 COSMIC Cell Line Gene CNV Profiles 1.0 2.06626 NCI-H441 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.843546 H3K27me3_Pancreatic Islets Roadmap Epigenomics Histone Modification Site Profiles 1.0 null BNC2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 22.1983 SK-MEL-3 COSMIC Cell Line Gene Mutation Profiles 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-E7-A541-01A-11R-A26T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CDX2-22108803-LS180-HUMAN ChEA Transcription Factor Targets 2022 1.0 null NR6A1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 47.8563 HCC1395 COSMIC Cell Line Gene CNV Profiles 1.0 2.06626 CTCF_LNCaP clone FGC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Hmx3 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 25.6037 detection of stimulus involved in sensory perception GO Biological Process Annotations 2015 1.0 null membrane LOCATE Predicted Protein Localization Annotations 1.0 null outer CP in posterosuperior (dorsal) parietal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.00723 Psychotic disorder DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.167 ZR75B Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -1.30517 SNU-620 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.61407 IPC-298 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.20056 AR-22383394-PROSTATE-CANCER-HUMAN ChEA Transcription Factor Targets 2022 1.0 null r7 part of cochlear column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.16121 DMS 53 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.10392 CHD1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCIH28 DepMap CRISPR Gene Dependency 1.0 2.23922 Foxl2 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 65.5581 BT20 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 2.34787 HS695T DepMap CRISPR Gene Dependency 1.0 2.87288 HCC1395 CCLE Cell Line Gene CNV Profiles 1.0 1.61882 MZ in primary visual cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.10242 RAX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 32.0118 C170 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.921484 KMS26 DepMap CRISPR Gene Dependency 1.0 2.2902 MZ in caudal perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.4121 layer III of rostral entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.21191 superficial stratum of SePal Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.31841 Bipolar disorder DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.033 Subparafascicular nucleus, parvicellular part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.21655 short insular gyri, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.93788 frontalcortex BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -0.915083 PHF8_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H2342 COSMIC Cell Line Gene Mutation Profiles 1.0 null CTCF_kidney_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POU4F1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 71.3868 SNU81 CCLE Cell Line Gene CNV Profiles 1.0 1.36318 TBX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.558 Brain Lower Grade Glioma_LGG_TCGA-E1-5305-01A-01R-1896-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SALL4-22934838-CD34+-HUMAN ChEA Transcription Factor Targets 2022 1.0 null CTCF_GM12870_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null EVX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 23.2964 Medial geniculate complex, dorsal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.14646 periventricular stratum of r7Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.24673 CTCF_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_fibroblast of the aortic adventitia_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null r4 part of ventral lateral lemniscal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.25707 Taenia tecta, dorsal part, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.08731 signal transduction GO Biological Process Annotations 2015 1.0 null HOXA4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.6134 GATA1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.9049 Kidney renal clear cell carcinoma_KIRC_TCGA-A3-3351-01A-02R-1325-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Dlx3 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 13.624 Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4638-01A-02R-1325-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CBX3_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null OB mitral cell layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.14616 NCI-H196 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.36776 r7 part of the posteroventral cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.05694 Tcf21 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 38.0989 TCF7 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.139 GSE210101,GSE210114_7_v_3_urod_human RummaGEO Gene Perturbation Signatures 1.0 null VAX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 24.3925 BATF::JUN JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.6996 VSX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 26.8346 CTCF_mammary epithelial cell_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null posterior hypothalamic nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.09243 SK-CO-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.99531 CTCF_fibroblast of upper leg skin_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Koelliker-Fuse subnucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.07229 HCC1569 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.828533 receptor activity GO Molecular Function Annotations 2015 1.0 null cortico-medial group, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.17692 CTCF_A549_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null biological_process GO Biological Process Annotations 2015 1.0 null Mixed gonadal dysgenesis DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.241 SNU201 CCLE Cell Line Gene CNV Profiles -1.0 -1.97086 Nfat5 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 35.0253 TTC1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.35869 r4 part of magnocellular medial vestibular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.0274 Dlx5 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 17.1692 TE15 CCLE Cell Line Gene CNV Profiles 1.0 1.7454 FOXC1 JASPAR Predicted Transcription Factor Targets 1.0 null WEHI-3B cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.386 JHOS-4 COSMIC Cell Line Gene Mutation Profiles 1.0 null COLO 680N Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.842684 Corpuscular Hemoglobin Concentration Mean DisGeNET Gene-Phenotype Associations 1.0 null MAF::NFE2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 22.4367 medial subdivision of central nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.37075 Prostate adenocarcinoma_PRAD_TCGA-HC-8256-01A-11R-2263-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PHOX2A JASPAR Predicted Human Transcription Factor Targets 2025 1.0 61.9544 ISL2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.4986 CTCF_fibroblast of lung_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CALU6 DepMap CRISPR Gene Dependency 1.0 4.16215 Stat2 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 61.122 FOXA1-25329375-VCAP-HUMAN ChEA Transcription Factor Targets 2022 1.0 null Delusional disorder DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.749 r5 part of magnocellular medial vestibular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.15329 SKM-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.24311 MEIS1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 30.5261 Hoxd13 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 22.6068 H3K4me1_A549_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Cortical amygdalar area, posterior part, medial zone, layer 2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.57798 CTV-1 COSMIC Cell Line Gene Mutation Profiles 1.0 null BARHL1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.6258 Infralimbic area, layer 2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.27158 Aorta smooth muscle cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.538 Pou5f1::Sox2 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 33.5183 MAFG::NFE2L1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 22.7637 fallopian tube GTEx Tissue Gene Expression Profiles 1.0 1.13425 GSX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 23.9228 NCI-N87 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.15805 ARID3A ENCODE Transcription Factor Targets 1.0 null HCC70 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 1.01861 medial part of r10B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.20082 reticular formation of p1Lim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.06478 496100495_FWM_no dementia_TBI_90-94_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 8.16567 Head and Neck squamous cell carcinoma_HNSC_TCGA-TN-A7HI-01A-11R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GSE151612_4_v_3_pracinostat_human RummaGEO Drug Perturbation Signatures -1.0 null HS281T CCLE Cell Line Gene CNV Profiles 1.0 1.38774 HCC2157 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.24379 M/G1 phase-specific MADS box-forkhead transcription factor complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.786 PROP1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 67.5586 SOX15 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 24.9976 Brain Lower Grade Glioma_LGG_TCGA-S9-A7R8-01A-11R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cervix uteri GTEx Tissue Gene Expression Profiles 1.0 1.56549 FOXC1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 47.1065 CTCF_GM12873_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Expression and translocation of olfactory receptors Reactome Pathways 2024 1.0 null Nucleus of the solitary tract, gelatinous part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.15911 MAFK ENCODE Transcription Factor Targets 1.0 null SNU-387 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.02665 EZH2_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ESRRA JASPAR Predicted Human Transcription Factor Targets 2025 1.0 26.5146 NCI-H2171 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 3.19222 Primary visual area, layer 4 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.56333 MDAMB361 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 1.21077 Amylin receptor complex 1 COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.817 anteroventral nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.16765 DLX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 28.0455 paracentral lobule, posterior part, right, lateral bank of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -2.67513 MZ in ventromedial extrastriate cortex (VP) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.07414 Brain Lower Grade Glioma_LGG_TCGA-HT-8108-01A-11R-2404-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Posterior limiting nucleus of the thalamus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.39395 Nucleus of the solitary tract Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.55786 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A7CK-01A-11R-A32P-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null DLX6 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 33.543 GSE111247_0_v_13_temozolomide_human RummaGEO Drug Perturbation Signatures -1.0 null cingulum bundle, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.50693 CTCF_B cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MYCN-21190229-SHEP-21N-HUMAN ChEA Transcription Factor Targets 2022 1.0 null Paragigantocellular reticular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.07287 KMS-34 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.03632 17823238-TableS5 GeneSigDB Published Gene Signatures 1.0 null ITK_defectivemutant_125_GSE28200 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -1.3132 HSF2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 24.4419 lung GTEx Tissue Gene Expression Profiles -1.0 -0.864022 superior rostral gyrus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.0838 OV-90 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.03792 ZNF582 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 31.3038 RCC10RGB CCLE Cell Line Gene CNV Profiles -1.0 -1.57867 Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-7044-01A-11R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_HepG2_hg19_6 ENCODE Transcription Factor Binding Site Profiles 1.0 null FOXA1_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null MDAMB134VI Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -2.05132 NKX6-3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 22.2455 GSE102870_3_v_9_nr1h4_human RummaGEO Gene Perturbation Signatures -1.0 null COLO 320DM Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.35221 frontal pole, right, inferior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.871701 Msx3 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 15.2178 superior olivary complex, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.933615 mantle zone of r6BL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.9487 SMC3 ENCODE Transcription Factor Targets 1.0 null CAL 27 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.07547 NOMO-1 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.744 upper dorsal lateral hypothalamic area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.25152 detection of chemical stimulus involved in sensory perception GO Biological Process Annotations 2015 1.0 null r5 part of dorsal parvicellular reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.5007 ZNF680 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 29.0819 KNS81 CCLE Cell Line Gene CNV Profiles -1.0 -1.62275 HOXA7 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.574 mantle zone of AOD Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.12494 MAFF ENCODE Transcription Factor Targets 1.0 null POU6F2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 42.4161 PBX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.2185 IZ in dorsomedial extrastriate cortex (V2) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.15012 VZ in subcallosal region Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.10547 RORA JASPAR Predicted Human Transcription Factor Targets 2025 1.0 49.9822 RAD21_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null ARID3A_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_GM12873_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null mammillary body, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.76533 184A1N4 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 1.13147 Nfatc2 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 24.5218 Dyscalculia DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.098 CTCF_brain microvascular endothelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Sarcoma_SARC_TCGA-PC-A5DM-01A-11R-A27Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TEAD2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 22.1771 cell part LOCATE Predicted Protein Localization Annotations 1.0 null VZ in dorsomedial frontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.02126 KMS-12-PE Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.27611 Aorta thoracica smooth muscle cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.556 HNF1A JASPAR Predicted Human Transcription Factor Targets 2025 1.0 47.4264 CTCF_HeLa-S3_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null superficial stratum of r1Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.64319 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A1MF-01A-11R-A13Y-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cuneate nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.13724 GSE235701,GSE261434_2_v_1_enasidenib_human RummaGEO Drug Perturbation Signatures 1.0 null polysensory temporal cortex (area 22p) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.03106 PHF8 ENCODE Transcription Factor Targets 1.0 null MDA-MB-157 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.8189 PACADD165 DepMap CRISPR Gene Dependency 1.0 7.47358 X, left, lateral hemisphere Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.832221 600MPE Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -0.88411 pedunculo(pontine) tegmental nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.20836 LNZTA3WT4 COSMIC Cell Line Gene Mutation Profiles 1.0 null VSX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.6926 sublayer 6b of OCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.15591 EN COSMIC Cell Line Gene Mutation Profiles 1.0 null temporal pole, right, medial aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.64567 LN-229 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.31812 medial group of nuclei, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.00723 substantia nigra, pars compacta, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.10119 CTCF_A549_hg19_9 ENCODE Transcription Factor Binding Site Profiles 1.0 null Pheochromocytoma and Paraganglioma_PCPG_TCGA-SP-A6QG-01A-12R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POU3F3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 51.5082 Ptf1a JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 48.5859 MM1S CCLE Cell Line Gene CNV Profiles -1.0 -1.48919 KYM-1 COSMIC Cell Line Gene CNV Profiles 1.0 2.06626 Hmx1 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 25.767 COLO-679 COSMIC Cell Line Gene Mutation Profiles 1.0 null CTCF_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null superficial stratum of r7BL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.39304 deep layers of caudal entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.879075 brownfat BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 1.0683 NANOG ChEA Transcription Factor Targets 1.0 null gigantocellular reticular nuclei Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.61589 CTCF_keratinocyte_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null CEBPA JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.4421 cellular_component COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 sublayer 6a of OCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.47062 SNU-398 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.842684 Brain Lower Grade Glioma_LGG_TCGA-DH-A7UU-01A-12R-A34F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NKX6-2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.2625 COV362 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.078 CAL851 CCLE Cell Line Gene CNV Profiles 1.0 1.73247 UMUC13 DepMap CRISPR Gene Dependency 1.0 2.25794 HOXD3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 29.378 CTCF_GM12878_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null A2058 COSMIC Cell Line Gene Mutation Profiles 1.0 null Aorta cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.538 superficial stratum of PcPV Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.31016 PAX3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 29.2432 HCT-15 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.922383 ES-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.27712 Nucleus of the lateral lemniscus, ventral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.03171 layer 4 of OCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.25179 signaling receptor activity GO Molecular Function Annotations 2015 1.0 null SALL4-22934838-CD34+-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null RVH-421 COSMIC Cell Line Gene Mutation Profiles 1.0 null Sox5 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 17.0242 AR-27623747-22RV1-MOUSE-PROSTATE-CARCINOMA ChEA Transcription Factor Targets 2022 1.0 null H3K27me3_Brain Hippocampus Middle Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-WY-A85C-01A-11R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null RAX JASPAR Predicted Human Transcription Factor Targets 2025 1.0 34.957 facial nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.80587 OSRC2 DepMap CRISPR Gene Dependency 1.0 3.41209 CTCF_HCT116_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null Olfactory tubercle, polymorph layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.01971 CTCF_mammary epithelial cell_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null cellular_component GO Cellular Component Annotations 2015 1.0 null internal cortical nucleus of inferior colliculus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.59827 TCC-PAN2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.86686 mantle zone of r3BI Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.1092 Brain Lower Grade Glioma_LGG_TCGA-E1-A7YU-01A-11R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_fibroblast of mammary gland_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null premotor cortex (area 6) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.13829 r3 part of parvicellular medial vestibular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.00136 CTCF_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null WRL-68 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.86 HMBOX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.84 CTCF_foreskin fibroblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_GM12872_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SARC9371 COSMIC Cell Line Gene Mutation Profiles 1.0 null CTCF_choroid plexus epithelial cell_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Dmbx1 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 18.9125 POU3F2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 50.4781 Foxj3 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 55.9506 VZ in septal region Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.968062 Posterior parietal association areas, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.0679 rostral ventrolateral reticular area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.39304 HCC1395 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.23253 Primary somatosensory area, lower limb, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.06297 CAL-85-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.05617 ONECUT3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 68.0048 HS 683 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.52106 Signaling by GPCR Reactome Pathways 2014 1.0 null COLO-824 COSMIC Cell Line Gene Mutation Profiles 1.0 null 143B Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.70306 intermediate stratum of m2ADL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.12673 Dlx4 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 13.89 retrotrapezoid nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.90144 CTCF_IMR-90_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TET1 ChEA Transcription Factor Targets 1.0 null CTCF_GM12865_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null G-361 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.828533 A-498 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.993904 GSX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.8819 CTCF_lung_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null G141 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.934481 SNU1196 CCLE Cell Line Gene CNV Profiles 1.0 1.57642 Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A7IN-01A-11R-A35K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_fibroblast of villous mesenchyme_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null detection of stimulus GO Biological Process Annotations 2015 1.0 null Synovial cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.882 KP2 CCLE Cell Line Gene CNV Profiles -1.0 -1.35269 CESS COSMIC Cell Line Gene CNV Profiles 1.0 2.06626 CTCF_fibroblast of upper leg skin_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null paracentral lobule, posterior part, right, bank of cingulate sulcus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -2.4182 CTCF_fibroblast of pedal digit skin_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null KYM1 CCLE Cell Line Gene CNV Profiles 1.0 1.97184 Secondary motor area, layer 6a Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.41594 SG in caudal entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -2.01932 basal ventral medial nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.39595 mantle zone of r4BL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.65365 CTCF_osteoblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null r1 part of principal trigeminal sensory nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.64227 r3 part of basolateral reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.97168 HT-115 COSMIC Cell Line Gene Mutation Profiles 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-VS-A94Z-01A-11R-A38B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Interanteromedial nucleus of the thalamus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.25179 KYSE410 DepMap CRISPR Gene Dependency 1.0 2.04322 inferior olivary complex, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.860611 cochlear nuclei Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.835541 medial geniculate nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.21999 periventricular stratum of r7Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.15329 periaqueductal gray substance, dorsolateral portion Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.07984 MCC26 COSMIC Cell Line Gene Mutation Profiles 1.0 null VMRCRCZ CCLE Cell Line Gene CNV Profiles -1.0 -1.54708 Interanterodorsal nucleus of the thalamus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.22313 NCIH1651 CCLE Cell Line Gene CNV Profiles 1.0 1.72506 HT-55 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.20056 dentate nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.2258 periventricular stratum of r6Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.57864 Sox1 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 46.9072 Nucleus of the solitary tract, medial part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.60913 NCIH441 DepMap CRISPR Gene Dependency 1.0 2.43698 496100571_FWM_dementia_TBI_81_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 4.98194 Head and Neck squamous cell carcinoma_HNSC_TCGA-BB-4223-01A-01R-1436-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_BJ_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null anterior hypothalamic area, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.80055 NANOG-20526341-ESCS-HUMAN ChEA Transcription Factor Targets 2022 1.0 null HOXC8 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.1763 CTCF_GM12874_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null transverse gyri, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.72759 mantle zone of the IG Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.77199 Liver hepatocellular carcinoma_LIHC_TCGA-DD-A4NV-01A-11R-A311-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCIH2087 DepMap CRISPR Gene Dependency 1.0 2.63219 CA2 field, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.1047 fusiform gyrus, right, bank of cos Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.917377 Posterior parietal association areas, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.08821 RCOR1 ChEA Transcription Factor Targets 1.0 null CTCF_GM13976_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Sarcoma_SARC_TCGA-DX-A7ER-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null THOC2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.11415 EZH2_astrocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null A-431 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.83806 MDAMB468 DepMap CRISPR Gene Dependency 1.0 2.19974 paraventricular nuclei, right of thalamus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.951085 UNCX JASPAR Predicted Human Transcription Factor Targets 2025 1.0 32.0263 r6 part of dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.57864 GSE264010_0_v_1_parp1_human RummaGEO Gene Perturbation Signatures -1.0 null A-427 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.828533 RAD21_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null AR ChEA Transcription Factor Targets 1.0 null NCIH2171 CCLE Cell Line Gene CNV Profiles 1.0 1.66132 P12-ICHIKAWA COSMIC Cell Line Gene Mutation Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-E1-A7YW-01A-11R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Cochlear nucleus, subpedunclular granular region Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.24023 MDAMB468 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.750648 Infralimbic area, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.51485 lateral tuberal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.43989 Trachoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.14 FOXB1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 53.7956 superficial stratum of the IG Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.77296 icSARS-Cov_Day1_None_GSE50000 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -2.26079 LNCAP-CLONE-FGC COSMIC Cell Line Gene Mutation Profiles 1.0 null A-Vietnam-1203_CIP048_RG4-2004(H5N1)PB2-627E_2day-MOI-10^4_None_GSE43301 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.54451 Prdm5 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 27.5541 Postpiriform transition area, layers 3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.39304 LCAM1 DepMap CRISPR Gene Dependency 1.0 2.1055 lateral subdivision of area 9 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.971857 CTCF_medulloblastoma_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null YSCCC DepMap CRISPR Gene Dependency 1.0 4.6052 intermediate stratum of r10BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.04794 496100541_FWM_possible Alzheimer's disease_no TBI_95-99_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 4.51248 EZH2_fibroblast of dermis_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null peripeduncular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.14767 CTCF_GM12875_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null plasma membrane LOCATE Predicted Protein Localization Annotations 1.0 null BCL6B JASPAR Predicted Human Transcription Factor Targets 2025 1.0 32.6353 Olfactory transduction KEGG Pathways 2026 1.0 null Infralimbic area, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.32547 TE-10 COSMIC Cell Line Gene Mutation Profiles 1.0 null SU-DHL-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.078 Orbital area, ventrolateral part, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.00688 PL4 COSMIC Cell Line Gene Mutation Profiles 1.0 null PMC7181746-41467_2020_15886_MOESM8_ESM.xlsx-Patient_9_CCF-Affected_Genes_PITX1 Rummagene Transcription Factor Associations 2026 1.0 null FOXA2_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null POU2F1::SOX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 28.2434 E2F7 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 35.6297 CDX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 34.6435 DU 145 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.940741 CTCF_MCF-7_hg19_9 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_A549_hg19_6 ENCODE Transcription Factor Binding Site Profiles 1.0 null Olfactory Signaling Pathway Reactome Pathways 2014 1.0 null Heschl's gyrus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.3493 amygdalostriatal transition area Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.03687 HDAC6_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_GM12873_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SKBR3 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -1.28164 RAD21_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null IZ in caudal cingulate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.64106 CTCF_GM12864_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_fibroblast of gingiva_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Prostate adenocarcinoma_PRAD_TCGA-EJ-7788-01A-11R-2118-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null arcuate nucleus of the hypothalamus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.27332 CTCF_GM13977_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null retroparafascicular area of thalamus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.833291 ZNF24 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 31.9314 AGS COSMIC Cell Line Gene Mutation Profiles 1.0 null LHX9 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 27.6949 superficial stratum of r1BL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.06134 EVX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 23.4995 HEP-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.953747 PMC8755441-mmc3.xlsx-IRF7-Up-ezh2_IRF7 Rummagene Transcription Factor Associations 2026 1.0 null RAD21_H1-hESC_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null MYF6 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 27.3388 RS4-11 COSMIC Cell Line Gene Mutation Profiles 1.0 null ESX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 22.2788 Hoxa11 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 24.6483 temporal muscle trigeminal motor cell group Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.60482 Primary visual area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.34312 caudal portion of VFC (area 44) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.808 HOXB4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.1417 superficial stratum of r6BL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.91761 143B DepMap CRISPR Gene Dependency 1.0 2.03871 nucleus sagulum, superficial part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.7365 NCIH1781 CCLE Cell Line Gene CNV Profiles 1.0 1.38916 GATA2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.802 BT483 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.955635 layer III of caudal entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.05185 LHX5 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 22.517 NCIH747 DepMap CRISPR Gene Dependency 1.0 4.12606 KMS-11 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.912939 LHX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.5009 SEPTIN7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.22873 NCI-H1781 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.23253 Skin Cutaneous Melanoma_SKCM_TCGA-D3-A2JK-06A-11R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CR-7374-01A-11R-2016-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GSE200430_1_v_0_sema3d_human RummaGEO Gene Perturbation Signatures -1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-E7-A7PW-01A-11R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MEOX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.0275 GSE225735_0_v_4_aldosterone_human RummaGEO Drug Perturbation Signatures 1.0 null SOX21 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 55.8756 Brain Lower Grade Glioma_LGG_TCGA-DU-6396-01A-11R-1708-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ISX JASPAR Predicted Human Transcription Factor Targets 2025 1.0 35.9399 mammillary body, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 2.7141 frontal pole, left, medial aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.918991 PDX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 34.5279 CTCF_retinal pigment epithelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H2452 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.993904 Prostate adenocarcinoma_PRAD_TCGA-EJ-8469-01A-11R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null anterior orbital gyrus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.03848 CTCF_MCF-7_hg19_8 ENCODE Transcription Factor Binding Site Profiles 1.0 null g-protein coupled receptor activity GO Molecular Function Annotations 2015 1.0 null CTCF_epithelial cell of proximal tubule_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_HeLa-S3_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null HSF4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 22.837 VZ in hypothalamic portion Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.873939 CTCF_mammary epithelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-7048-01A-11R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TBR1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.8651 SCC25 CCLE Cell Line Gene CNV Profiles 1.0 1.60907 Cortical amygdalar area, posterior part, medial zone, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.42406 NCI-H2126 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.83806 Prostate adenocarcinoma_PRAD_TCGA-CH-5791-01A-11R-1580-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4642-01B-01R-1305-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null area postrema Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.910412 G protein-coupled receptor, rhodopsin-like InterPro Predicted Protein Domain Annotations 1.0 null Inferior salivatory nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.43989 CTCF_GM12864_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4882-01A-02R-1426-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCI-H1734 COSMIC Cell Line Gene Mutation Profiles 1.0 null PF-382 COSMIC Cell Line Gene Mutation Profiles 1.0 null vestibular nuclei, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.38409 RCH-ACV COSMIC Cell Line Gene Mutation Profiles 1.0 null Sarcoma_SARC_TCGA-DX-A3U6-01A-11R-A29R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NANOG-18347094-MESC-mouse ChEA Transcription Factor Binding Site Profiles 1.0 null lateral part of r6B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.9487 CTCF_K562_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null FOXD3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 105.582 r6 part of the cochlear column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.22542 c2c12 BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -0.8937 molecular layer of caudal subiculum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.860635 integral component of membrane COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.098109 intermediate stratum of p1Lim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.06478 ALX3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 32.1993 Brain Lower Grade Glioma_LGG_TCGA-HT-7606-01A-11R-2090-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null OTX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.3529 Stat6 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 32.7343 FOXC2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 32.9481 HOXD4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.3698 A549 DepMap CRISPR Gene Dependency 1.0 5.36189 Brain Lower Grade Glioma_LGG_TCGA-DB-5277-01A-01R-1470-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TRPS1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.7054 intermediate stratum of r6Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.0679 TE14 CCLE Cell Line Gene CNV Profiles 1.0 2.52134 Schizophrenia DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.172 TE10 DepMap CRISPR Gene Dependency 1.0 7.69366 CTCF_GM12872_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null FOXA1-27270436-LNCAP-HUMAN-PROSTATE-CARCINOMA ChEA Transcription Factor Targets 2022 1.0 null superficial stratum of r4BL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.07287 Primary somatosensory area, lower limb, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.08821 plasma membrane COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 NKX6-1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 26.7307 preoptic region, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.944774 ZBTB17 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.3389 Parapyramidal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.9525 PECAPJ34CLONEC12 CCLE Cell Line Gene CNV Profiles 1.0 1.4488 Prostate adenocarcinoma_PRAD_TCGA-V1-A8MG-01A-11R-A36G-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PAX4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 33.0332 P2URK562 DepMap CRISPR Gene Dependency 1.0 2.2048 mantle zone of r7Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.16237 FOXA1-21572438-LNCAP-HUMAN ChEA Transcription Factor Targets 2022 1.0 null RAD21_SK-N-SH_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-DU-A7TI-01A-11R-A33Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null superficial stratum of r4BI Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.11979 MAFK_IMR-90_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4849-01A-01R-1277-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null occipital pole, left, superior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.35205 H3K4me2_A549_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Olfactory organ TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.982 CTCF_BE2C_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null DUXA JASPAR Predicted Human Transcription Factor Targets 2025 1.0 83.9141 COLO 699 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.828533 CTCF_A549_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_spleen_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null pineal gland Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.51099 SW982 DepMap CRISPR Gene Dependency 1.0 3.25599 raphe magnus nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.42445 OPM-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.993904 SNAI2_01_292 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.60464 paraventricular nucleus of the hypothalamus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.46672 COV644 CCLE Cell Line Gene CNV Profiles -1.0 -2.24079 pontine nuclei, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.874823 posterior group of nuclei, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 2.04388 r11 part of the trigeminal column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.60863 RMUGS CCLE Cell Line Gene CNV Profiles 1.0 1.78531 HOXB8 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.0849 GATA6 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 22.4287 r11 part of spinal trigeminal nucleus, caudal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.60902 H2AFZ_keratinocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_fibroblast of mammary gland_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PRDM1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 22.6796 Pancreatic adenocarcinoma_PAAD_TCGA-XN-A8T5-01A-12R-A36G-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null COLO792 DepMap CRISPR Gene Dependency 1.0 3.56203 Shox2 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 14.7389 parabigeminal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.42868 CHD1 ENCODE Transcription Factor Targets 1.0 null ARTN CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.01491 r11 alar plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.08514 MIXL1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 32.0222 HOXB5 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 24.4455 LN340 CCLE Cell Line Gene CNV Profiles -1.0 -1.3664 ACHN Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.871611 superficial stratum of r7BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.79465 MYCN-21190229-SHEP-21N-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null HCC38 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.953747 CTCF_GM06990_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null HOXB13 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 32.3432 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-IR-A3LH-01A-21R-A213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null layer 6 of OCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.16883 CTCF_BE2C_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-P5-A780-01A-12R-A32Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null KDM5B ENCODE Transcription Factor Targets 1.0 null Medial geniculate complex, medial part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 3.63412 r4 part of lateral pontine nuclei Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.11447 BARHL2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.5029 A-Vietnam-1203_CIP048_RG4-2004(H5N1)PB2-627E_7day-MOI-10^4_None_GSE43301 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 1.58946 CH-1 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.243 CTCF_GM12872_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null G142 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.98456 FU97 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.03632 Secondary motor area, layer 5 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.66544 KDM5B_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null emboliform nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.978256 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A6JT-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GLO1_OE_GDS4991_546_mouse_anxiety disorders GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null CTCF_A549_hg19_7 ENCODE Transcription Factor Binding Site Profiles 1.0 null PL4 COSMIC Cell Line Gene CNV Profiles 1.0 2.06626 animal TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 H3K4me3_A549_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null perilemniscal isthmic area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.23939 Subiculum, dorsal part, stratum radiatum Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.03804 HCC1187 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.02665 Lung adenocarcinoma_LUAD_TCGA-49-4486-01A-01R-1206-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null septal nuclei, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.915193 CTCF_SK-N-SH_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null M059K CCLE Cell Line Gene CNV Profiles 1.0 1.51471 ARID3A_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null 21NT DepMap CRISPR Gene Dependency 1.0 2.58329 r10 basal plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.57814 TLX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 36.5249 OSC-20 COSMIC Cell Line Gene Mutation Profiles 1.0 null PRRX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 22.6432 embryoday8.5 BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 1.01557 SG in inferolateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 3.16385 inner CP in subgenual (subcallosal) cingulate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.1253 H2AFZ_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HOXD9 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 24.1596 CTCF_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null superficial stratum of r7Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.05694 MNX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.652 intermediate stratum of r4Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.58821 embryonic stem no feeder BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -1.18827 GPCR downstream signaling Reactome Pathways 2014 1.0 null 624 MEL Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.24379 BSX JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.1992 CTCF_cardiac muscle cell_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null ML1 CCLE Cell Line Gene CNV Profiles 1.0 1.32921 CTCF_bronchial epithelial cell_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null pyrazinamide_mus musculus_gpl6246_gse48027 GEO Signatures of Differentially Expressed Genes for Small Molecules -1.0 null DRGX JASPAR Predicted Human Transcription Factor Targets 2025 1.0 34.6839 Globus pallidus, internal segment Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.2652 tissues, cell types and enzyme sources TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 Schizophrenia 3 DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.635 NCI-H650 COSMIC Cell Line Gene Mutation Profiles 1.0 null POU2F2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 64.9242 laterorostral part of entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.90111 Subparafascicular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.00116 superficial stratum of r11Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.60979 fastigial nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.18435 KMRC20 CCLE Cell Line Gene CNV Profiles -1.0 -2.32374 SNU349 DepMap CRISPR Gene Dependency 1.0 4.41496 Lhx3 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 60.2 precentral gyrus, right, bank of the precentral sulcus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.23006 Arid3a JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 30.4444 BATF3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.8532 SK-CO-1 COSMIC Cell Line Gene CNV Profiles 1.0 2.06626 lateral part of r3B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.90144 CTCF_GM06990_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_GM12878_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null IZ in caudal perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.20795 JAK1_knockdown_160_GSE37012 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -2.03563 GSE186112_1_v_0_med23_human RummaGEO Gene Perturbation Signatures -1.0 null ventral posterolateral nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.12373 Crus 1, granular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.07499 Hmx2 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 40.436 EC-GI-10 COSMIC Cell Line Gene CNV Profiles 1.0 2.06626 HCT-8 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.867531 KAT2B_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ventromedial hypothalamic nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.843451 A-Vietnam-1203_CIP048_RG3-2004(H5N1)PB1-F2del_2day-MOI-10^4_None_GSE44441 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 1.54096 ventral tier of thalamus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.72298 ARGFX JASPAR Predicted Human Transcription Factor Targets 2025 1.0 42.3129 CTCF_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null layer 5 of OCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.12044 NCI-H2029 COSMIC Cell Line Gene Mutation Profiles 1.0 null GSE162015_2_v_0_nfkb1_human RummaGEO Gene Perturbation Signatures 1.0 null CTCF_epithelial cell of proximal tubule_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H2172 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.52745 spinalcordlower BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -1.18184 NCI-H2073 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.11528 CTCF_SK-N-SH_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null EMX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 35.0901 LBX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 31.8724 Folium-tuber vermis (VII) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.16513 DPRX JASPAR Predicted Human Transcription Factor Targets 2025 1.0 23.1774 COV644 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.04732 ZNF35 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 21.0705 Kidney renal papillary cell carcinoma_KIRP_TCGA-2K-A9WE-01A-11R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POU4F3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 71.527 CX-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.867478 intrinsic component of membrane COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.098109 RBBP5 ENCODE Transcription Factor Targets 1.0 null A10 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.741 HT-1376 COSMIC Cell Line Gene Mutation Profiles 1.0 null WIDR Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.86686 Mitochondrial inner membrane assembly complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 1.169 DUX4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 42.3953 Signal Transduction Reactome Pathways 2014 1.0 null RAD21_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null intrinsic component of membrane GO Cellular Component Annotations 2015 1.0 null EZH2_myotube_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PRRX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 33.7815 GATA3-21878914-MCF-7-HUMAN ChEA Transcription Factor Targets 2022 1.0 null response to stimulus GO Biological Process Annotations 2015 1.0 null TBX3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.9368 Prostate adenocarcinoma_PRAD_TCGA-M7-A725-01A-12R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null preoptic BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -2.53236 vomeralnasalorgan.VMO. BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -0.879265 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-Q1-A73R-01A-11R-A33Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null mantle zone of r10Lim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.12543 BARX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 22.448 amygdalohippocampal area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.00825 CTCF_fibroblast of lung_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null M-1 BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -0.839427 superficial stratum of r7BI Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.17675 HCC1263 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.953747 SMC3_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SARS-BatSRBD_Day1_None_GSE50000 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -2.48614 POU6F1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 42.3372 VAX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 26.3921 mantle zone of r6Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.2257 Orbital area, ventrolateral part, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.44343 r10 part of gigantocellular reticular area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.00136 STAT1::STAT2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 45.4645 dorsal subnucleus of MG Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.72118 POU3F4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.097 SK-MEL-31 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.03632 Brain Lower Grade Glioma_LGG_TCGA-HT-7478-01A-11R-2027-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Pancreatic adenocarcinoma_PAAD_TCGA-HV-A7OP-01A-11R-A33R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Ventral pallidus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.02173 NCI-H2369 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.1205 FOXA1-26743006-CHIP-SEQ-LNCAP-ABL-HUMAN ChEA Transcription Factor Targets 2022 1.0 null CTCF_HepG2_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAFK_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-P5-A5EU-01A-11R-A27Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H4 DepMap CRISPR Gene Dependency 1.0 2.15085 CTCF_fibroblast of skin of abdomen_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_GM12870_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H2803 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.078 Kidney renal papillary cell carcinoma_KIRP_TCGA-B9-4116-01A-02R-1351-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null anterior pretectal nucleus, ventral superficial part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.31016 Arid5a JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 17.5412 CTCF_GM12864_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H2369 COSMIC Cell Line Gene Mutation Profiles 1.0 null ESRRB JASPAR Predicted Human Transcription Factor Targets 2025 1.0 50.5899 Primary visual area, layer 6a Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.38014 motor nucleus of trigeminal nerve, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.28254 Bladder Urothelial Carcinoma_BLCA_TCGA-2F-A9KT-01A-11R-A38B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Prostate adenocarcinoma_PRAD_TCGA-CH-5766-01A-11R-1580-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null OV56 CCLE Cell Line Gene CNV Profiles 1.0 1.50584 CTCF_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null rostral part of entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.919542 MEWO COSMIC Cell Line Gene Mutation Profiles 1.0 null Cortical amygdalar area, posterior part, medial zone Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.93495 mantle zone of r11Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.60863 r7 (gustatory) part of solitary complex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.15329 Prostate adenocarcinoma_PRAD_TCGA-EJ-7789-01A-11R-2118-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null lateral ganglionic eminence Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.848169 MAFF_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_CD14-positive monocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SUM 52PE Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.20158 mantle zone of r10Ve Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.18482 Nucleus of the solitary tract, lateral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.18865 IZ in caudal midinferior temporal cortex (area TF) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.891172 HCC1954 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.619138 LMX1B JASPAR Predicted Human Transcription Factor Targets 2025 1.0 39.539 central nuclear group Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.851232 POU4F2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 52.7923 transmembrane signaling receptor activity GO Molecular Function Annotations 2015 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4691-01A-01R-1277-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null intermediate stratum of r2BL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.20669 r6 part of magnocellular medial vestibular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.29765 CTCF_K562_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null HOXB3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.8489 Nr2e1 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 37.024 TE-10 COSMIC Cell Line Gene CNV Profiles 1.0 2.06626 H3K4me1_HepG2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null NCIH2030 CCLE Cell Line Gene CNV Profiles 1.0 1.66828 SCC-25 COSMIC Cell Line Gene CNV Profiles 1.0 2.06626 GBX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 27.1422 superior colliculus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.09265 SMC3_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null precentral gyrus, right, bank of the central sulcus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.894523 Vomeronasal organ TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.712 planum temporale, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.891321 GRHL3_01_336 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.69561 not applicable_cell type comparison_GSE49439_365_human_podocytes and progenitors GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null IGROV-1 COSMIC Cell Line Gene Mutation Profiles 1.0 null ZNF136 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.483 r9 basal plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.46443 496100579_HIP_possible Alzheimer's disease_no TBI_90-94_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 3.88081 HESX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.6597 Arx JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 19.2078 Primary visual area, layer 6b Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.37301 LN319 CCLE Cell Line Gene CNV Profiles 1.0 2.00487 Brain Lower Grade Glioma_LGG_TCGA-E1-A7YV-01A-11R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_WERI-Rb-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null FLO1 DepMap CRISPR Gene Dependency 1.0 2.1035 FOXL1 JASPAR Predicted Transcription Factor Targets 1.0 null PACADD137 DepMap CRISPR Gene Dependency 1.0 2.80654 HCC364 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.24379 Foxj2 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 29.774 CTCF_fibroblast of lung_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_GM12869_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null membrane COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 medial habenular nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -2.03093 outer CP in subgenual (subcallosal) cingulate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.62486 inner CP in dorsomedial extrastriate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.959597 OV56 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.11159 Pancreatic adenocarcinoma_PAAD_TCGA-H6-A45N-11A-12R-A26U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_GM12875_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TE-15 COSMIC Cell Line Gene CNV Profiles 1.0 2.06626 CTCF_kidney epithelial cell_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-Q1-A73Q-01A-21R-A32P-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PMC13187244-41392_2026_2766_MOESM2_ESM.xlsx-Table_S17-Table_S17_Differentially_expressed_genes_in_OCI-AML3_cells_ZMIZ1_inhibitor_SIH-001_4E_vs_DMSO_RUNX2 Rummagene Transcription Factor Associations 2026 1.0 null inferior frontal gyrus, orbital part, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.25617 HSSCH2 DepMap CRISPR Gene Dependency 1.0 2.90165 CTCF_retinal pigment epithelial cell_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Pheochromocytoma and Paraganglioma_PCPG_TCGA-SP-A6QF-01A-12R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Medial amygdalar nucleus, posteroventral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.06726 MEIS2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 50.2537 Medulla, motor related Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.48252 SNU-81 COSMIC Cell Line Gene Mutation Profiles 1.0 null GATA2 JASPAR Predicted Transcription Factor Targets 1.0 null anterior olfactory area, dorsal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.12524 Median preoptic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.0679 BICR16 DepMap CRISPR Gene Dependency 1.0 2.28638 SW403 CCLE Cell Line Gene CNV Profiles -1.0 -2.0116 NRL JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.4602 HOXA6 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.3145 intermediate part of r3B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.1092 FOXA1_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null FOXE1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 95.2456 multiform (lateral) division of MD Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.37763 Foxo1 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 43.2481 HCC2998 COSMIC Cell Line Gene Mutation Profiles 1.0 null H3K4me3_A549_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null suboptic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.02916 CTCF_GM10266_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null dentate gyrus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.18681 outer CP in caudal midinferior temporal cortex (area TF) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.851614 cellular_component LOCATE Predicted Protein Localization Annotations 1.0 null Prostate adenocarcinoma_PRAD_TCGA-YL-A8SR-01B-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PKNOX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.7484 Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4901-01A-01R-1426-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HCC1395 DepMap CRISPR Gene Dependency 1.0 2.08051 Field CA1, stratum pyramidale Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.21254 ZNF558 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 83.6916 SALL4 ChEA Transcription Factor Targets 1.0 null signal transducer activity GO Molecular Function Annotations 2015 1.0 null NCI-H1623 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.13722 CTCF-21964334-BJAB-B-HUMAN ChEA Transcription Factor Targets 2022 1.0 null Foxo3 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 44.0352 detection of chemical stimulus GO Biological Process Annotations 2015 1.0 null dorsorostral division of MFC (area 32) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.931552 intermediate stratum of VTTh Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.19799 UOK101 CCLE Cell Line Gene CNV Profiles -1.0 -1.48208 intermediate stratum of r5Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.5007 Sarcoma_SARC_TCGA-IE-A4EI-01A-11R-A24X-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null superior colliculus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.908795 outer SZ in ventromedial extrastriate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.995152 HEY Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.01712 molecular transducer activity GO Molecular Function Annotations 2015 1.0 null CTCF_myotube_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null regulation of biological process GO Biological Process Annotations 2015 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7424-01A-11R-2081-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Cortical amygdalar area, posterior part, medial zone, layer 3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.58821 NCIN87 CCLE Cell Line Gene CNV Profiles -1.0 -1.65109 r2 part of basolateral reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.15911 RAD21_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POU1F1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 42.7999 induseum griseum Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.77436 POU2F1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.2446 Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-4739-01A-02R-1514-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HCC193 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.4491 reticular formation of p2Lim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.48778 CTCF_endothelial cell of umbilical vein_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null stratum radiatum of rostral CA1 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.84755 KMS11 CCLE Cell Line Gene CNV Profiles -1.0 -1.50348 RMUG-S Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.09383 Secondary motor area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.04302 CTCF_NB4_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POU3F1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 24.7111 BARX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.4148 Foxf1 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 33.6462 inferior frontal gyrus, opercular part, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.28446 GPCR, rhodopsin-like, 7TM InterPro Predicted Protein Domain Annotations 1.0 null ventricular (matrix) zone of pons Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.49181 FOXA1 ENCODE Transcription Factor Targets 1.0 null superficial stratum of VTTh Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.22239 Sarcoma_SARC_TCGA-DX-A6YT-01A-21R-A355-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null 786-0 COSMIC Cell Line Gene Mutation Profiles 1.0 null CTCF_keratinocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null KYSE-180 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.898921 CTCF_fibroblast of pulmonary artery_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null HOP-92 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.36984 cell part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 MEIS3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.684 gracile nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.71484 T98G CCLE Cell Line Gene CNV Profiles -1.0 -1.54559 SNU423 DepMap CRISPR Gene Dependency 1.0 2.01402 KAT2B ENCODE Transcription Factor Targets 1.0 null Dmrt1 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 24.2802 pyramidal layer of IG Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.77296 paravermis of cerebellum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.847529 T98G Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.10392 cell surface receptor signaling pathway GO Biological Process Annotations 2015 1.0 null SOX10 MotifMap Predicted Transcription Factor Targets 1.0 null MSX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 35.3793 mantle zone of r3BL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.90144 Spinal vestibular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.51896 regulation of cellular process GO Biological Process Annotations 2015 1.0 null Brain Lower Grade Glioma_LGG_TCGA-WY-A85E-01A-11R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null lingual gyrus, right, peristriate Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.846477 CTCF_GM12874_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null cell part GO Cellular Component Annotations 2015 1.0 null plasma membrane GO Cellular Component Annotations 2015 1.0 null CTCF_brain microvascular endothelial cell_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null HNF1B JASPAR Predicted Human Transcription Factor Targets 2025 1.0 47.0186 496100463_FWM_possible Alzheimer's disease_no TBI_100+_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 11.5232 Nkx3-2 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 19.466 intermediate stratum of r5Ve Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.16513 CTCF_endothelial cell of umbilical vein_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_K562_hg19_6 ENCODE Transcription Factor Binding Site Profiles 1.0 null Pseudobulbar palsy DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.098 Skin Cutaneous Melanoma_SKCM_TCGA-EB-A553-01A-12R-A27Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null trochlear nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.5302 intermediate stratum of r3Ve Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.83959 HCA1 DepMap CRISPR Gene Dependency 1.0 2.98271 intermediate stratum of r6Ve Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.29765 MOLP-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.13624 Medial geniculate complex, ventral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.28135 VZ in caudal subicular cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.27494 CTCF_HeLa-S3_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null cuneiform nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.877962 RPMI 2650 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.922383 MEOX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.9336 ONECUT1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 46.0036 r3 part of ventral lateral lemniscal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.09849 NCI-H1650 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.46183 frontal pole, right, superior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.19316 superficial stratum of r3BL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.10376 CTCF ENCODE Transcription Factor Targets 1.0 null KMRC2 CCLE Cell Line Gene CNV Profiles -1.0 -1.33947 CTCF_pancreas_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PHOX2B-30127528-BE2C-HUMAN-BRAIN-NEUROBLASTOMA ChEA Transcription Factor Targets 2022 1.0 null HUPT3 DepMap CRISPR Gene Dependency 1.0 2.40496 mantle zone of r4BI Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.00136 posteromedial cortical amygdaloid area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.23182 Field CA1, pyramidal layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.05294 Mecom JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 23.1111 SR COSMIC Cell Line Gene Mutation Profiles 1.0 null HCC1599 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.939833 Mafb JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 26.6585 M059J Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.02832 Prostate adenocarcinoma_PRAD_TCGA-EJ-A8FS-01A-11R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_GM12868_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EGFR_druginhibition_83_GSE27640 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -2.22208 RMGI DepMap CRISPR Gene Dependency 1.0 5.46679 Prostate adenocarcinoma_PRAD_TCGA-WW-A8ZI-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null superficial stratum of Ist Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.31211 lateral part of r4B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.66544 g-protein coupled receptor signaling pathway GO Biological Process Annotations 2015 1.0 null IGR-37 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.03565 PHOX2B JASPAR Predicted Human Transcription Factor Targets 2025 1.0 83.4555 outer CP in dorsomedial parietal cortex (area 7m) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.904777 Primary somatosensory area, barrel field, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.21907 CBX3 ENCODE Transcription Factor Targets 1.0 null ABC-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.835156 spleen BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 1.36237 SW1710 CCLE Cell Line Gene CNV Profiles -1.0 -1.44886 GBX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 35.3184 CTCF_GM12871_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null ZR-75-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.994551 r3 part of magnocellular medial vestibular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.83959 SETDB1_02_52 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.6105 AR-22383394-PROSTATE_CANCER-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null HOXB6 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.9822 Lateral vestibular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.25061 superficial stratum of m2ADL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.7365 POU3F2-20337985-501MEL-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null HDAC6 ENCODE Transcription Factor Targets 1.0 null SW900 COSMIC Cell Line Gene Mutation Profiles 1.0 null HSC-39 COSMIC Cell Line Gene CNV Profiles 1.0 2.06626 CTCF_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_HL-60_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null KLF5-20875108-MESCS-MOUSE ChEA Transcription Factor Targets 2022 1.0 null CTCF_GM12878_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null DKMG CCLE Cell Line Gene CNV Profiles -1.0 -1.8976 RMUGS DepMap CRISPR Gene Dependency 1.0 2.79532 mantle zone of r10BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.20669 mantle zone of r1Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.77912 membrane GO Cellular Component Annotations 2015 1.0 null NIH:OVCAR-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.55543 r1 part of trigeminal sensory column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.77818 RAD21_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_LNCaP clone FGC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Edinger-Westphal nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.40073 NCI-H1651 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.20713 r7 part of parapyramidal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.79465 CTCF_cardiac fibroblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_GM20000_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HS 936.T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.828533 NCI-H2373 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.17078 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A6JM-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SHOX JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.2035 Anteroventral nucleus of thalamus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.00276 intermediate stratum of PcPD Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.01645 SKCO1 CCLE Cell Line Gene CNV Profiles 1.0 2.1854 HOXA5 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 21.585 dorsolateral part of m2A Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.26824 subthalamic nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.824491 CTCF_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null polymorph layer of TuStr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.03804 temporal pole, right, inferior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.00712 EZH2_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null medioventral part of putamen Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.57395 NO-10 COSMIC Cell Line Gene Mutation Profiles 1.0 null POU3F2 ChEA Transcription Factor Targets 1.0 null COV504 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.953747 HOXA3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.6683 olfactory receptor activity GO Molecular Function Annotations 2025 1.0 null KP-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.86854 BATF JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.6127 intermediate part of r4B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.00596 CTCF_GM12801_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null integral component of membrane GO Cellular Component Annotations 2015 1.0 null Dlx2 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 22.5138 interpeduncular nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -2.19314 Bladder Urothelial Carcinoma_BLCA_TCGA-BL-A5ZZ-01A-31R-A30C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Pax7 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 22.492 NCIH1623 CCLE Cell Line Gene CNV Profiles -1.0 -2.77331 ME-180 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.898921 NZM7 DepMap CRISPR Gene Dependency 1.0 2.39704 Agranular insular area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.02418 H2AFZ ENCODE Transcription Factor Targets 1.0 null dorsofrontal pretectal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.01677 HOXA1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 32.5715 SU8686 COSMIC Cell Line Gene Mutation Profiles 1.0 null AM38 CCLE Cell Line Gene CNV Profiles -1.0 -1.49165 Acute Myeloid Leukemia_LAML_TCGA-AB-2938-03A-01T-0736-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null C32 DepMap CRISPR Gene Dependency 1.0 3.47934 RAD21_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H2AFZ_CD14-positive monocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null posterior orbital gyrus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.867226 CAL27 CCLE Cell Line Gene CNV Profiles 1.0 1.39026 Alx1 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 34.8389 NFE2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 22.0399 SNU626 DepMap CRISPR Gene Dependency 1.0 2.23802 EZH2 ENCODE Transcription Factor Targets 1.0 null NCI-H441 COSMIC Cell Line Gene CNV Profiles 1.0 2.06626 precentral gyrus, right, inferior lateral aspect of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.25763 ZNF274 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 22.6467 speech-language disorder-1 DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.037 CTCF_fibroblast of the aortic adventitia_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null FADU Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.33605 SNU213 DepMap CRISPR Gene Dependency 1.0 2.56161 U2904 DepMap CRISPR Gene Dependency 1.0 2.19178 intermediate stratum of r10Ve Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.53753 HDAC1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SCC-25 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.90278 NCIH1373 DepMap CRISPR Gene Dependency 1.0 2.4578 CTCF_BJ_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27me3_CD4 Memory Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Esophagus - Gastroesophageal Junction GTEx Tissue Gene Expression Profiles 2023 1.0 7.21239 NCIH1650 CCLE Cell Line Gene CNV Profiles -1.0 -1.76334 HS939-T COSMIC Cell Line Gene Mutation Profiles 1.0 null mantle zone of m2ADL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.2685 ZNF143 ENCODE Transcription Factor Targets 1.0 null GATA4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.9435 Lung squamous cell carcinoma_LUSC_TCGA-21-5782-01A-01R-1635-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null dorsal lateral geniculate nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.827855 periventricular stratum of r3Ve Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.00136 MPP-89 COSMIC Cell Line Gene CNV Profiles 1.0 2.06626 liminal part of the r10 alar plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.11979 VZ in caudal entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.0133 Neuro D MotifMap Predicted Transcription Factor Targets 1.0 null HCC2218 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -0.807396 lateral hypothalamic area, anterior region, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 2.04781 HIPK1_knockout_170_GSE39253 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -2.00543 MZ in rostral midinferior temporal cortex (area 36) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.62942 superior parietal lobule, right, superior bank of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.862531 NCI-H2030 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.72869 NOP2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.43024 Liver hepatocellular carcinoma_LIHC_TCGA-BC-A10W-11A-11R-A131-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Olfactory receptor InterPro Predicted Protein Domain Annotations 1.0 null Hoxa13 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 34.9254 r1 part of intermediate nucleus of the lateral lemniscus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.05974 mantle zone of r2Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.74614 kidney GTEx Tissue Gene Expression Profiles -1.0 -1.35622 Olfactory glomerulus TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.025 bed nucleus of stria terminalis, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.12707 RAD21_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null nucleus sagulum, deep part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.12613 layer 1 of AOD cortex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.72163 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4335-01A-01R-1289-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Geniculate group, dorsal thalamus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.49686 LHX6 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 39.712 r2 part of principal trigeminal sensory nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.54004 GSE146982_7_v_5_metformin_human RummaGEO Drug Perturbation Signatures -1.0 null NCI-H920 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.15394 r10 part of spinal vestibular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.53683 CFPAC-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.06714 CTCF_fibroblast of dermis_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null U266B1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.867531 SNU1105 CCLE Cell Line Gene CNV Profiles -1.0 -1.47036 Copula pyramidis, molecular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.04201 MM.1S Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.44839 RCOR1-19997604-NEURONS-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null MAFK_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Mesothelioma_MESO_TCGA-TS-A7P8-01A-11R-A34F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_choroid plexus epithelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Postpiriform transition area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.76684 Suprageniculate nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.74939 ChIP_NANOG_18347094 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null PROX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.3061 molecular_function GO Molecular Function Annotations 2015 1.0 null RAD21_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MSX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 34.8539 LMX1A JASPAR Predicted Human Transcription Factor Targets 2025 1.0 35.4536 SARS-BatSRBD_Day2_None_GSE50000 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 1.85946 GSE217452_3_v_1_docetaxel_human RummaGEO Drug Perturbation Signatures 1.0 null Sensory Perception Reactome Pathways 2024 1.0 null r7 basal plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.09849 lateral hypothalamic area, anterior part Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.50105 Brain Lower Grade Glioma_LGG_TCGA-DH-A66D-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cell periphery COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 GSE238116_3_v_0_egr1_human RummaGEO Gene Perturbation Signatures 1.0 null paraterete nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.18262 parvicellular (lateral) subparafascicular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.47245 superior frontal gyrus, right, medial bank of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.862618 biological regulation GO Biological Process Annotations 2015 1.0 null Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GS-A9TV-01A-11R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-BB-8601-01A-11R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Orbital area, ventrolateral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.55045 MFM-223 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -3.32945 r4 part of dorsal parvicellular reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.57814 ZNF143_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GSE115328_6_v_0_lenalidomide_human RummaGEO Drug Perturbation Signatures -1.0 null Vestibular nuclei Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.22563 rostral subdivision of paraventricular nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.3878 Liver hepatocellular carcinoma_LIHC_TCGA-CC-A8HS-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BEN COSMIC Cell Line Gene Mutation Profiles 1.0 null HOXC4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.1456 Anterior olfactory nucleus, dorsal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.34883 EJM COSMIC Cell Line Gene Mutation Profiles 1.0 null external granular (germinal) layer of lower rhombic lip Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.980666 ZNF143_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null G124 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.5688 IZ in lateral temporal-occipital cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.04984 CTCF_fibroblast of pulmonary artery_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HT-29 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.867478 KYAE-1 COSMIC Cell Line Gene Mutation Profiles 1.0 null SUM159PT Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -0.886302 r4 part of basolateral reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.66544 mast cells BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 1.9445 U-2932 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.922383 Whole body TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 1.0 2.095 NOTO JASPAR Predicted Human Transcription Factor Targets 2025 1.0 36.3131 HCC1171 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.73753 camptodactyly-arthropathy-coxa vara-pericarditis syndrome DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.025 MKN-7 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.19522 Brain Lower Grade Glioma_LGG_TCGA-TM-A84H-01A-11R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null lateral habenular nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.98037 CTCF_kidney epithelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_HEK293_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Glycogen storage disease III DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.214 496100436_FWM_no dementia_no TBI_95-99_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 8.44414 CTCF_GM10248_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TE10 CCLE Cell Line Gene CNV Profiles 1.0 3.08979 ECGI10 CCLE Cell Line Gene CNV Profiles 1.0 2.20983 Olfactory receptor neuron TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.082