association	dataset	threshold value	standardized value
dorsolateral prefrontal cortex_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.926194
CTCF_medulloblastoma_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hsa-miR-4700-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
CTCF_GM12891_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ventrolateral prefrontal cortex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.37021
MKN-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.01648
CW-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ZNF677	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.4326
HCC1806	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.10886
Lung squamous cell carcinoma_LUSC_TCGA-39-5031-01A-01R-1443-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cellular_component	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.040215
HSF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.1013
inferolateral temporal cortex (area TEv, area 20)_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.863906
CX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.961273
NCI-H1781	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.82403
Brain Lower Grade Glioma_LGG_TCGA-P5-A737-01A-11R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HCC1171	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.968589
SW 403	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.936657
hsa-miR-4704-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
MDAMB134VI	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.29872
Bladder Urothelial Carcinoma_BLCA_TCGA-E5-A4TZ-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
sensory cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.416195
ALX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.4417
SNU308	CCLE Cell Line Gene Expression Profiles	1.0	1.40859
Lymphoid tissue	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	2.364
NCI-H630	COSMIC Cell Line Gene Mutation Profiles	1.0	null
cerebellum_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.23728
HCC1419	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.66847
Portio vaginalis cervicis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.617
HS604T	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32691
Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5894-01A-11R-1592-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Cerebral cortex	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
HMPOS cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.456
BHLHE22	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.9888
16397242-Table1	GeneSigDB Published Gene Signatures	1.0	null
GSE148657_2_v_1_cd44_human	RummaGEO Gene Perturbation Signatures	1.0	null
JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.6236
chromosomal part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.046821
JHOS2	CCLE Cell Line Gene Expression Profiles	1.0	1.52447
hsa-miR-4768-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
CTCF_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
IGROV-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CTCF	ENCODE Transcription Factor Targets	1.0	null
JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.5203
pro-b-lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.33965
FOSL1::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.548
Rectum adenocarcinoma_READ_TCGA-EI-6506-01A-11R-1736-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HOXB3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.4699
hsa-miR-3170	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A7CM-01A-11R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-39-5036-01A-01R-1443-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Expression and translocation of olfactory receptors	Reactome Pathways 2024	1.0	null
RARB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.3378
striatum_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.872564
PMC12224929-ADVS-12-2416784-s006.xlsx-DEG_circGLIS3_KD-Unnamed_6_AR	Rummagene Transcription Factor Associations 2026	1.0	null
ESX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.3046
cSARS Bat SRBD_24Hour_None_GSE37827	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.30678
A2780	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48864
WIDR	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.962138
FOXF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.3889
IRF9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.1026
amygdaloid complex_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.875814
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4882-01A-02R-1426-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cardiovascular system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.041132
TEAD2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.4742
WM983B	CCLE Cell Line Gene Expression Profiles	1.0	1.41113
PMC4815041-NIHMS715090-supplement-Supplementary_Table_10.xlsx-CCF_DP_clustering-Hugo_Symbol_PITX1	Rummagene Transcription Factor Associations 2026	1.0	null
Signal Transduction	Reactome Pathways 2014	1.0	null
NR1H2::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.48
MDAMB436	CCLE Cell Line Gene CNV Profiles	1.0	1.59212
LBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.3478
496100607_TCx_dementia_TBI_77_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.35112
PBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.3333
UCSD-242L	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0508
central nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.056979
intracellular organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.040866
BSX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.2663
OAW42	CCLE Cell Line Gene CNV Profiles	-1.0	-1.71272
hsa-miR-374b	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
NCI-H250	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MEOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.7441
head	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.061187
ONECUT1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.5358
ZNF582	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	81.4164
Ejaculatory duct	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.895
Lung squamous cell carcinoma_LUSC_TCGA-66-2768-01A-01R-0851-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
P30-OHK	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCIH322	CCLE Cell Line Gene CNV Profiles	-1.0	-2.80221
TK	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ALEXANDERCELLS	CCLE Cell Line Gene CNV Profiles	1.0	1.35479
hsa-miR-4506	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
posterior (caudal) superior temporal cortex (area 22c)_16 pcw_M_12287	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.05653
alimentary canal	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
cerebellar cortex_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.24451
Liver hepatocellular carcinoma_LIHC_TCGA-LG-A6GG-01A-11R-A311-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DMRT3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.5024
basal ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.107848
GFI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.3361
MC116	CCLE Cell Line Gene CNV Profiles	-1.0	-1.46203
PAX8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.3925
hsa-miR-513a-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
SW1271	CCLE Cell Line Gene CNV Profiles	-1.0	-1.40064
Signaling by GPCR	Reactome Pathways 2014	1.0	null
SKUT1	CCLE Cell Line Gene CNV Profiles	1.0	1.36152
MEF2C	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.88
TRIM28-17542650-NTERA2-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
vascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.042288
Prostate adenocarcinoma_PRAD_TCGA-EJ-7789-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TCF7L2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.7896
NFKB1-27076634-BEAS2B-HUMAN-LUNG-INFLAMMATION	ChEA Transcription Factor Targets 2022	1.0	null
NCIH358	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44362
496100577_FWM_probable Alzheimer's disease_TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.09181
anterior (rostral) cingulate (medial prefrontal) cortex_19 pcw_F_12885	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.74889
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.13638
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
EMX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.0304
FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.4876
SNU-1040	COSMIC Cell Line Gene Mutation Profiles	1.0	null
RAX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.3799
olfactory receptor neuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.902424
Lung squamous cell carcinoma_LUSC_TCGA-66-2790-01A-01R-0980-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
whole body	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053109
FOXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.86
496100549_FWM_no dementia_TBI_87_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.52455
posteroventral (inferior) parietal cortex_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.14497
hsa-miR-4279	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
SJRH30	CCLE Cell Line Gene CNV Profiles	-1.0	-1.8174
HS695T	CCLE Cell Line Gene Expression Profiles	1.0	1.75498
GBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.3417
SOX8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.052
Sarcoma_SARC_TCGA-MO-A47R-01A-11R-A24X-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FLI1::FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.2843
A2780	CCLE Cell Line Gene CNV Profiles	1.0	1.33802
MDAMB436	CCLE Cell Line Gene Expression Profiles	-1.0	-2.77648
H3K4me1_mononuclear cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
NFYA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.6319
Rectum adenocarcinoma_READ_TCGA-BM-6198-01A-11R-1736-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
639-V	COSMIC Cell Line Gene Mutation Profiles	1.0	null
gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.050981
JUN::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.4307
FOXP3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.7082
anterior (rostral) cingulate (medial prefrontal) cortex_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.972527
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
ZNF143_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
A2780	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SU-DHL-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.29878
G142	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05586
hippocampus	HPA Tissue Protein Expression Profiles	1.0	0.944645
PA-TU-8988S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.20222
BARX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.6711
CTCF_GM12892_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
urogenital system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.23362
HCT-15	COSMIC Cell Line Gene Mutation Profiles	1.0	null
LCLC103H	CCLE Cell Line Gene CNV Profiles	1.0	1.68169
FOXD1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.05
DV90	CCLE Cell Line Gene Expression Profiles	1.0	2.04916
Acute Myeloid Leukemia_LAML_TCGA-AB-2911-03A-01T-0734-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-3667-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
SUIT2	CCLE Cell Line Gene Expression Profiles	1.0	1.58537
SNU-81	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H1703	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.93897
Amylin receptor complex 1	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.78
mediodorsal nucleus of thalamus_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.872564
NCI-H522	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.04433
ZNF354A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	135.948
Hematopoietic system	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	2.364
496100663_TCx_no dementia_no TBI_86_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.29014
OLIG3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.4809
MUTZ5	CCLE Cell Line Gene CNV Profiles	1.0	2.79328
reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051907
nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.082129
Prostate adenocarcinoma_PRAD_TCGA-WW-A8ZI-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PDX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.8764
ZIM3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.6281
SPI1_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MDAMB415	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.766565
plasma membrane	LOCATE Predicted Protein Localization Annotations	1.0	null
FOSL2::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.7856
TE-441-T	COSMIC Cell Line Gene Mutation Profiles	1.0	null
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A2LZ-01A-11R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-1263	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
SPI1	ENCODE Transcription Factor Targets	1.0	null
blood	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051592
PBX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.7445
Sarcoma_SARC_TCGA-DX-A7EM-01A-11R-A36F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cerebrovascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.223509
PHOX2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.523
SK-MEL-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
LMX1A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.7203
Stomach	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.616
Liver hepatocellular carcinoma_LIHC_TCGA-2Y-A9GY-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
nose	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.549312
BNC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.7801
Brain Lower Grade Glioma_LGG_TCGA-TQ-A7RQ-01A-11R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-18-3411-01A-01R-0980-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MKN-74	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22166
NCI-H1563	COSMIC Cell Line Gene Mutation Profiles	1.0	null
TBXT	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.2028
TEAD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.838
cerebellar cortex_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.990582
sense organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.086102
NCI-H1838	COSMIC Cell Line Gene Mutation Profiles	1.0	null
FOXA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.2514
ZR75B	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.773078
female reproductive system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
nucleus lentiformis	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.607722
Schinzel type phocomelia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.483
Liver hepatocellular carcinoma_LIHC_TCGA-K7-A5RG-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DLX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.8165
Pheochromocytoma and Paraganglioma_PCPG_TCGA-WB-A81E-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-491-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
KARPAS620	CCLE Cell Line Gene Expression Profiles	1.0	2.40881
membrane	LOCATE Predicted Protein Localization Annotations	1.0	null
MAFG::NFE2L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.7032
GATA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.0094
Skin Cutaneous Melanoma_SKCM_TCGA-FR-A726-01A-11R-A32P-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A1EJ-01A-11R-A155-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
posterior (caudal) superior temporal cortex (area 22c)_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.874677
SW684	COSMIC Cell Line Gene Mutation Profiles	1.0	null
537 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.54914
Brain	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Kidney renal papillary cell carcinoma_KIRP_TCGA-B3-4104-01A-02R-1351-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CTCF_LNCaP clone FGC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
peripheral nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.152493
RAJI	CCLE Cell Line Gene Expression Profiles	1.0	1.38571
EFM19	CCLE Cell Line Gene CNV Profiles	1.0	1.36827
DV-90	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.38756
ETV5::FOXO1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.4154
H3K4me2_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
143B cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.219
NCI-H1963	COSMIC Cell Line Gene Mutation Profiles	1.0	null
496100449_PCx_no dementia_no TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.21829
Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7JA-01A-12R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BHLHE23	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.9922
SET2	CCLE Cell Line Gene CNV Profiles	1.0	1.34278
testis	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.230656
HCC1428	CCLE Cell Line Gene Expression Profiles	1.0	2.25277
dorsolateral prefrontal cortex_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.07728
Rectum adenocarcinoma_READ_TCGA-F5-6812-01A-11R-1830-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H2AFZ_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PMC10290283-biol-2022-0622-sm3.pdf-107-ZNF808_ZNF808	Rummagene Transcription Factor Associations 2026	1.0	null
hsa-miR-4517	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
496100335_PCx_no dementia_TBI_81_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.72416
GATA1::TAL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.911
hippocampus (hippocampal formation)_37 yrs_M_12303	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.14497
MOGGUVW	CCLE Cell Line Gene Expression Profiles	-1.0	-1.51984
cerebral hemisphere	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.076548
CPC-N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4904
Brain Lower Grade Glioma_LGG_TCGA-FG-A60K-01A-11R-A29R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prader-Willi syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.026
inferolateral temporal cortex (area TEv, area 20)_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.14497
disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.040467
placenta	HPA Tissue Protein Expression Profiles	1.0	0.944645
Sensory Perception	Reactome Pathways 2024	1.0	null
ZNF35	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.8382
ESRRA_01_115	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	1.56917
PSN1	CCLE Cell Line Gene Expression Profiles	-1.0	-2.56662
JDP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.4807
PKNOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.6921
Prostate adenocarcinoma_PRAD_TCGA-EJ-5505-01A-01R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CTCF_kidney_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
AN3-CA	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A0TN-01A-21R-A14Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TP73	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.1365
HDAC6_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
male reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.061938
LU99	CCLE Cell Line Gene Expression Profiles	1.0	1.39872
CTCF_GM12878_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CDX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.207
NCI-H345	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HAND2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7451
RCM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.962138
bronchoalveolar system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.138882
PROP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.7154
primary visual cortex (striate cortex, area V1/17)_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.982745
CTCF_mammary epithelial cell_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DAN-G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.886224
HOXA7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.6883
NFIL3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.0299
male reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.058373
primary visual cortex (striate cortex, area V1/17)_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.60255
H3K9me3_HeLa-S3_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.04079
Thyroid follicular epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.823
U2OS	CCLE Cell Line Gene Expression Profiles	1.0	3.40804
gastrointestinal tract	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
thrombocytopenia-absent radius syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.22
AU565	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.886855
MCF10DCIS.COM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.06103
FTC238	CCLE Cell Line Gene Expression Profiles	1.0	1.6136
Metanephron	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.693
female reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052696
genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.052064
MEF2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.1642
epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.056251
ZNF85_01_126	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	1.22833
SARC9371	COSMIC Cell Line Gene Mutation Profiles	1.0	null
KHM1B	CCLE Cell Line Gene Expression Profiles	1.0	2.13505
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32634
NCI-H2342	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.04873
496100371_TCx_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.77428
gonad	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.214388
CTCF_GM20000_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cerebellar cortex_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.908821
KARPAS-45	COSMIC Cell Line Gene Mutation Profiles	1.0	null
severe combined immunodeficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.66755
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5187-01A-01R-1426-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-H6-A45N-11A-12R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Cerebral hemisphere	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
UNCX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.3561
Sarcoma_SARC_TCGA-SI-A71Q-01A-12R-A33J-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-3646	TargetScan Predicted Conserved microRNA Targets	1.0	1.11641
SUM 229PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.82403
TRIM28-17542650-NTERA2-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
Adrenocortical carcinoma_ACC_TCGA-OR-A5JT-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-E1-5303-01A-01R-1470-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
EP300	ENCODE Transcription Factor Targets	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-TQ-A7RW-01A-11R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Gastrointestinal tract	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	3.108
H3K9me3_Chondrocytes from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
leukocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052753
lymphoid tissue	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
M059J	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.979508
RMUGS	CCLE Cell Line Gene CNV Profiles	-1.0	-1.51514
LOVO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18516
CTNNB1	ChEA Transcription Factor Targets	1.0	null
KYSE-150	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.89755
hematopoietic system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
DU-145	COSMIC Cell Line Gene CNV Profiles	1.0	2.08108
Brain Lower Grade Glioma_LGG_TCGA-HT-A74L-01A-11R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Endocervix	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.57
HCC1187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2883
Lung squamous cell carcinoma_LUSC_TCGA-43-3920-01A-01R-0980-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CAL-120	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.95218
anterior (rostral) cingulate (medial prefrontal) cortex_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.37021
Acrosomal vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.329
Brain Lower Grade Glioma_LGG_TCGA-TQ-A7RG-01A-11R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Chromocenter	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.686
CA-SKI	COSMIC Cell Line Gene Mutation Profiles	1.0	null
FOXO1::FLI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.2836
Mayer-Rokitansky-Kuster-Hauser syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.428
Atypical autism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.144
urogenital system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.05135
Head and Neck squamous cell carcinoma_HNSC_TCGA-D6-6826-01A-11R-1915-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HOS cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.987
hippocampus (hippocampal formation)_16 pcw_M_12287	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.923397
SOX21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.7756
EN2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.5589
CTCF_mammary epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SNU1272	CCLE Cell Line Gene Expression Profiles	-1.0	-1.90945
CTCF_K562_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
integument	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.055728
HOXB2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.0843
hsa-miR-582-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
Integrin alpha2-beta1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.518
primary somatosensory cortex (area S1, areas 3,1,2)_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.830293
respiratory system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.07937
Telencephalon	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Ooplasm	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.745
HOXA3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.5465
PMC7895828-41419_2021_3488_MOESM3_ESM.xlsx-Sheet1-Supplementary_Table_3_List_of_deregulated_genes_in_c-MYC_altered_human_HCC_from_TCGA_LIHC_dataset_MYC	Rummagene Transcription Factor Associations 2026	1.0	null
kidney	GTEx Tissue Gene Expression Profiles	-1.0	-1.38034
POU2F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.2359
Skin Cutaneous Melanoma_SKCM_TCGA-BF-A3DM-01A-11R-A20F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
dorsolateral prefrontal cortex_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.923397
hsa-miR-216b	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
primary auditory cortex (core)_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.74889
RMUGS	CCLE Cell Line Gene Expression Profiles	1.0	1.44978
496100654_HIP_no dementia_no TBI_86_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.12814
primary motor cortex (area M1, area 4)_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.10109
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A115-01A-11R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H69	COSMIC Cell Line Gene Mutation Profiles	1.0	null
cell part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
posterior (caudal) superior temporal cortex (area 22c)_19 pcw_F_12885	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.923397
hsa-miR-4452	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
CALU3	CCLE Cell Line Gene CNV Profiles	-1.0	-1.57314
primary immunodeficiency disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.46466
Thyroid epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.34
HOXD4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.9798
CTCF_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_Caco-2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-RY-A83Y-01A-11R-A36H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BCPAP	CCLE Cell Line Gene Expression Profiles	1.0	1.91676
CTCF_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Meningocele	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.028
NCI-H2126	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HSF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.7666
HCC1588	CCLE Cell Line Gene Expression Profiles	-1.0	-1.49122
HDAC6	ENCODE Transcription Factor Targets	1.0	null
TCF21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.3295
NCIH2342	CCLE Cell Line Gene CNV Profiles	-1.0	-2.02149
CTCF_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TE-15	COSMIC Cell Line Gene CNV Profiles	1.0	2.08108
POU2F1::SOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	74.1292
lateral ventricle	HPA Tissue Protein Expression Profiles	1.0	0.944645
hsa-miR-550b	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
SNU886	CCLE Cell Line Gene Expression Profiles	-1.0	-2.01047
HCC1806	CCLE Cell Line Gene CNV Profiles	1.0	2.46655
primary somatosensory cortex (area S1, areas 3,1,2)_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.880649
anterior (rostral) cingulate (medial prefrontal) cortex_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.44571
Lung adenocarcinoma_LUAD_TCGA-55-8620-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
posterior (caudal) superior temporal cortex (area 22c)_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.20141
P12-ICHIKAWA	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CTCF_K562_hg19_7	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-VN-A88O-01A-11R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K27me3_mononuclear cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HS578T	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.02208
Lung squamous cell carcinoma_LUSC_TCGA-56-6546-01A-11R-1820-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCIH2106	CCLE Cell Line Gene Expression Profiles	-1.0	-1.89952
mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.112644
Kidney Chromophobe_KICH_TCGA-KO-8404-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.886224
Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A6H3-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
496100672_FWM_no dementia_no TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.94291
Brain Lower Grade Glioma_LGG_TCGA-S9-A7R1-01A-12R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
mediodorsal nucleus of thalamus_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.952489
H2AFZ_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HEP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.839008
hsa-miR-4528	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
496100329_FWM_probable Alzheimer's disease_TBI_100+_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.02611
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GS-A9TV-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CTCF_LNCaP clone FGC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SN12C	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HCC2688	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.52115
CDX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.5105
MAFF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.5734
G141	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00884
Pancreatic adenocarcinoma_PAAD_TCGA-H6-8124-11A-01R-2404-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
POU2F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.8251
NCI-H2110	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.49307
496100588_TCx_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.0403
COV318	CCLE Cell Line Gene CNV Profiles	-1.0	-1.84517
Kidney renal clear cell carcinoma_KIRC_TCGA-AS-3777-01A-01R-0864-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-374a	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.921135
mediodorsal nucleus of thalamus_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.05653
NOTO	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.8363
anterior (rostral) cingulate (medial prefrontal) cortex_10 mos_M_12977	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.923397
Nuclear envelope lumen	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.581
SRY	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.75
striatum_16 pcw_M_12879	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.982745
A4/FUK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.95763
FOSL2::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.8651
tissues, cell types and enzyme sources	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
FOXP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.6343
SH10TC	CCLE Cell Line Gene Expression Profiles	1.0	1.95953
RH30	CCLE Cell Line Gene CNV Profiles	-1.0	-1.66115
HOXB8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.0869
ventrolateral prefrontal cortex_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.21025
A4FUK	CCLE Cell Line Gene CNV Profiles	1.0	1.6196
Bladder Urothelial Carcinoma_BLCA_TCGA-C4-A0F1-01A-11R-A034-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-A49A-01A-11R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Thorax	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.34
ME-180	COSMIC Cell Line Gene CNV Profiles	1.0	2.08108
Prostate adenocarcinoma_PRAD_TCGA-EJ-5508-01A-02R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
496100546_TCx_no dementia_no TBI_78_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.81771
Intestine	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.616
FOSL2::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.327
HCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.839008
FOS::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.7638
COV434	CCLE Cell Line Gene Expression Profiles	1.0	1.66576
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A7XC-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ATF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.776
CTCF_NB4_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FOXJ2::ELF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.0893
Bladder Urothelial Carcinoma_BLCA_TCGA-KQ-A41O-01A-12R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
primary visual cortex (striate cortex, area V1/17)_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.14497
nerve	GTEx Tissue Gene Expression Profiles	1.0	1.15838
TOLEDO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.882868
Lung squamous cell carcinoma_LUSC_TCGA-21-5783-01A-41R-2187-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Mesothelioma_MESO_TCGA-LK-A4O6-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SW948	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BACH2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.2812
EKVX	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.29627
primary auditory cortex (core)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.19265
H3K9me3_fibroblast of lung_hg19_3	ENCODE Histone Modification Site Profiles	1.0	null
HCC1569	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0508
KASUMI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.77161
striatum_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.81596
KP4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.3441
Olfactory Signaling Pathway	Reactome Pathways 2014	1.0	null
QGP-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Potocki-Lupski syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.188
hsa-miR-342-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
KP4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.936657
SOX12	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.0605
MSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.4326
SNU410	CCLE Cell Line Gene CNV Profiles	-1.0	-2.45939
Amylin receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.691
496100278_FWM_no dementia_TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.35237
RCM-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ESRRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.0145
CDX2-20551321-CACO-2-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EA-A410-01A-11R-A32Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-4276	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
Mayer-Rokitansky-Kuster-Hauser syndrome type 1	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.166
HCC2998	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H596	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.935871
MOLT-16	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-P4-A5E8-01A-11R-A28H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FOS	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.1757
TT2609C02	CCLE Cell Line Gene CNV Profiles	-1.0	-2.2549
CHD1	ENCODE Transcription Factor Targets	1.0	null
Mesothelioma_MESO_TCGA-LK-A4O7-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.5432
chr15_22057539_A_G_b38	GTEx eQTL 2025	1.0	1.77432
BARHL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.2295
Pancreatic adenocarcinoma_PAAD_TCGA-IB-A5SS-01A-11R-A32O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Velocardiofacial syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.203
C32TG	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.896627
COLO 205	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.839008
b-lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.07461
alitretinoin_homo sapiens_gpl6480_gse43090	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NEUROG1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.0111
Brain Lower Grade Glioma_LGG_TCGA-S9-A7J1-01A-21R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09792
Liver hepatocellular carcinoma_LIHC_TCGA-BC-4073-01B-02R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
respiratory mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.521223
ROS-50	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SU-DHL-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.60512
SW756	COSMIC Cell Line Gene Mutation Profiles	1.0	null
upper (rostral) rhombic lip_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.37021
Mesonephric duct	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.537
animal	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
ERF::FOXO1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.0002
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
ES8	COSMIC Cell Line Gene Mutation Profiles	1.0	null
FOS::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7131
intrinsic component of membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
TCF4-32651957-PLC/PRF/5-HUMAN-LIVER-HEPTOMA	ChEA Transcription Factor Targets 2022	1.0	null
posteroventral (inferior) parietal cortex_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.52064
FOXC1	JASPAR Predicted Transcription Factor Targets	1.0	null
POU4F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.4619
lung	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.075854
GSE117212,GSE117214_0_v_1_zbtb1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
RARG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.3089
Thymus	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.34
CGTHW1	CCLE Cell Line Gene CNV Profiles	1.0	1.65743
NCIH1666	CCLE Cell Line Gene Expression Profiles	-1.0	-2.23679
mediodorsal nucleus of thalamus_10 mos_M_12977	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.15055
chromosomal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.430393
primary visual cortex (striate cortex, area V1/17)_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.74889
CTNNB1-20615089-FETAL-BRAIN-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
FOXP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.107
SNU-387	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2883
SUM159PT	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.01634
intracellular part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.040441
ERF::FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.1483
LHX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.438
TK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00169
PBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.0897
MZ7-MEL	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H1734	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NFYC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.0186
CTCF_MCF-7_hg19_8	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H820	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.952437
BT474	CCLE Cell Line Gene CNV Profiles	1.0	1.91296
CORL279	CCLE Cell Line Gene CNV Profiles	-1.0	-2.10001
EFO27	CCLE Cell Line Gene Expression Profiles	-1.0	-1.61677
NUGC-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.29227
embryo	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.057844
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A3MV-06A-11R-A21D-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HOXA10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.7276
RAD21_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
LHX9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.0743
ZNF143	ENCODE Transcription Factor Targets	1.0	null
endocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051408
internal male genital organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.055553
NCI-H1770	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.95854
PHOX2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	50.4833
CTCF_GM13977_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ventrolateral prefrontal cortex_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.47307
whole body	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
animal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053108
dorsolateral prefrontal cortex_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.58708
HCC1428	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.45512
nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.060831
posterior (caudal) superior temporal cortex (area 22c)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.857935
CTCF_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-F7-A623-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cerebral cortex	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.067278
HOXA6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.6522
RMUG-S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.3929
KYSE30	CCLE Cell Line Gene CNV Profiles	-1.0	-1.92758
primary auditory cortex (core)_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.61036
SW 948	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.886224
ZBTB32	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.3376
Brain Lower Grade Glioma_LGG_TCGA-DH-5141-01A-01R-1470-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MEIS2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.7285
primary somatosensory cortex (area S1, areas 3,1,2)_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.01746
CTCF_HepG2_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-ZG-A8QY-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
integral component of membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
FOXA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.0259
MDA-MB-361	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H2595	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.896627
Pancreatic adenocarcinoma_PAAD_TCGA-3E-AAAZ-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-KK-A6E0-01A-11R-A311-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
POU4F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.8315
CDX2-20551321-CACO-2-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
FOSL1::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.4684
SNU478	CCLE Cell Line Gene CNV Profiles	-1.0	-1.65609
OLIG1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.048
LCLC-103H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.27776
McKusick-Kaufman syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.178
SNU886	CCLE Cell Line Gene CNV Profiles	1.0	2.21286
FOSB::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.9535
VSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.1343
amygdaloid complex_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	3.4231
CTCF_GM10248_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_MCF-7_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Central nervous system	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
H3K9me3_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
NCI-H211	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PLC/PRF/5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05586
PK-45P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.3848
FOSL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.2539
hippocampus (hippocampal formation)_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.878185
SCC-9	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10583
peripheral nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.308251
artery disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.044528
ISL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.7749
HCC3153	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.735994
FOXA3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.8912
membrane part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
HCC202	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.834899
NCI-H2172	COSMIC Cell Line Gene Mutation Profiles	1.0	null
H3K9me3_fibroblast of dermis_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Adrenocortical carcinoma_ACC_TCGA-OR-A5JK-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung adenocarcinoma_LUAD_TCGA-93-A4JQ-01A-11R-A24X-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Alimentary canal	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	3.183
plasma membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
KDM5B	ENCODE Transcription Factor Targets	1.0	null
SQ1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.37573
RUNX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.4973
neuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.107724
UMC-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.44286
FOSL1::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.9085
ALL-PO	COSMIC Cell Line Gene CNV Profiles	1.0	2.08108
primary motor cortex (area M1, area 4)_37 yrs_M_12303	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.923397
NCCIT	COSMIC Cell Line Gene CNV Profiles	1.0	2.08108
KYSE410	CCLE Cell Line Gene CNV Profiles	1.0	2.20777
BT-549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.20222
YY1	JASPAR Predicted Transcription Factor Targets	1.0	null
CTCF_GM19240_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
VAX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.4268
hematopoietic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051742
OSR2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.4668
Prostate adenocarcinoma_PRAD_TCGA-HC-7080-01A-11R-1965-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-HC-7211-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Supraspliceosomal complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.287
NCI-H2030	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13847
Kidney renal papillary cell carcinoma_KIRP_TCGA-A4-7915-01A-11R-2204-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CTCF_K562_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-56-A49D-01A-11R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TRPS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.6063
salivary gland	GTEx Tissue Gene Expression Profiles	-1.0	-1.38034
TFAP4::FLI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.9187
NCI-H460	COSMIC Cell Line Gene Mutation Profiles	1.0	null
EN1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7457
nasal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.554876
TK-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.979508
hsa-miR-4691-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
KMS21BM	CCLE Cell Line Gene Expression Profiles	1.0	1.39223
Head and Neck squamous cell carcinoma_HNSC_TCGA-CR-7377-01A-11R-2016-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
viscus	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
BT20	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	2.40471
GPCR downstream signaling	Reactome Pathways 2014	1.0	null
DMS 79	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.24982
HESX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.7421
FOXO1::ELK1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.6113
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A1Q5-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-IK-8125-01A-11R-2256-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Chromosomal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.013
Uterine Carcinosarcoma_UCS_TCGA-N8-A4PQ-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-DU-5849-01A-11R-1708-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZKSCAN1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.5572
Nervous system	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-6022-01A-21R-1686-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
embryonic structure	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.055448
CTCF_GM12868_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_GM12873_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PMC10011543-41419_2023_5707_MOESM4_ESM.xlsx-genes_with_unique_SNP-F5-Thygro-r__CIC-1n_h-r__CIC-2n_h-r_CIC	Rummagene Transcription Factor Associations 2026	1.0	null
HT	CCLE Cell Line Gene Expression Profiles	1.0	1.3584
CTCF_GM19238_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FOXK1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.2424
A3KAW	CCLE Cell Line Gene Expression Profiles	1.0	1.42067
CALU-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.75386
Olfactory transduction	KEGG Pathways 2026	1.0	null
Olfactory Signaling Pathway	Reactome Pathways 2024	1.0	null
DETROIT 562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21828
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-HM-A6W2-06A-22R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CatSper complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.773
TCF7L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.2374
KM12	CCLE Cell Line Gene Expression Profiles	-1.0	-1.94787
orbital frontal cortex_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.872564
Prostate adenocarcinoma_PRAD_TCGA-2A-A8W1-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MAF::NFE2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.4642
NCCSTCK140	CCLE Cell Line Gene Expression Profiles	1.0	1.79921
TGBC11TKB	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-DB-A64P-01A-11R-A29R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PRRX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.3668
cerebral cortex	HPA Tissue Protein Expression Profiles	1.0	1.3158
CEBPG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.1065
ECC10	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NR2F2	ENCODE Transcription Factor Targets	1.0	null
PMC8046804-41467_2021_22478_MOESM11_ESM.xlsx-Del_AA-TCGA-Unnamed_17_TEAD1	Rummagene Transcription Factor Associations 2026	1.0	null
ovary	GTEx Tissue Gene Expression Profiles	1.0	1.39284
GB1	CCLE Cell Line Gene Expression Profiles	-1.0	-1.53231
Lung squamous cell carcinoma_LUSC_TCGA-NK-A5D1-01A-11R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF211	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.6247
KYSE-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.20222
Immune system	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	2.364
SK-MEL-28	COSMIC Cell Line Gene Mutation Profiles	1.0	null
hsa-miR-4317	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
FOXO4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.7368
CTCF_K562_hg19_6	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RL	CCLE Cell Line Gene Expression Profiles	1.0	1.7067
Brain Lower Grade Glioma_LGG_TCGA-E1-5319-01A-01R-1896-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-DU-A6S2-01A-21R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NR2F2_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TE8	CCLE Cell Line Gene Expression Profiles	-1.0	-1.90531
HOXC4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.8535
POU3F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.0465
ZNF766	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.9352
cell periphery	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
Lung squamous cell carcinoma_LUSC_TCGA-46-3769-01A-01R-0980-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CUX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.8143
endocrine gland	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.23362
cerebellar cortex_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.02201
CTCF_mammary epithelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MIXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.3449
FLO-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
JMSU1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.3327
NCI-H1299	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NKX2-5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.6495
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7433-01A-11R-2132-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
female reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054632
CTNNB1-20615089-FETAL_BRAIN-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
OLIG2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.2838
ZNF8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	54.1658
inferolateral temporal cortex (area TEv, area 20)_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.05653
Lung squamous cell carcinoma_LUSC_TCGA-66-2789-01A-01R-0980-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KNS-62	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H2122	COSMIC Cell Line Gene CNV Profiles	1.0	2.08108
Skin Cutaneous Melanoma_SKCM_TCGA-DA-A1I8-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE96777,GSE96778_1_v_0_zbtb4_human	RummaGEO Gene Perturbation Signatures	1.0	null
SPIC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.2534
kidney	HPA Tissue Protein Expression Profiles	1.0	0.944645
prader-willi syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.99233
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.86922
TAL1::TCF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.3864
PAX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.2959
KDM5B_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H1581	COSMIC Cell Line Gene Mutation Profiles	1.0	null
salivary gland	HPA Tissue Protein Expression Profiles	1.0	0.944645
HS343T	CCLE Cell Line Gene Expression Profiles	-1.0	-1.54174
PMC5817105-thnov08p0972s2.xls-SIX3-GeneName_SIX3	Rummagene Transcription Factor Associations 2026	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-YL-A8SH-01B-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K27me3_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
primary auditory cortex (core)_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.872564
A1207	CCLE Cell Line Gene CNV Profiles	1.0	1.4848
Lung adenocarcinoma_LUAD_TCGA-50-5931-01A-11R-1755-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ETV5::DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.8582
BT-474	COSMIC Cell Line Gene CNV Profiles	1.0	2.08108
CTCF_GM12875_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
amygdaloid complex_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.17366
female reproductive gland	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EX-A3L1-01A-11R-A32Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
icSARS CoV_30Hour_None_GSE37827	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.2975
primary visual cortex (striate cortex, area V1/17)_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.14497
Brain Lower Grade Glioma_LGG_TCGA-HT-7877-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1501
496100631_PCx_dementia_TBI_77_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.22694
Brain Lower Grade Glioma_LGG_TCGA-DB-A64Q-01A-11R-A29R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
YH13	CCLE Cell Line Gene CNV Profiles	1.0	1.70831
NCI-H2126	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.34642
MKN-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00169
BARX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.0
OVCAR-5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10373
FOXL1	JASPAR Predicted Transcription Factor Targets	1.0	null
DLX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.2906
U118MG	CCLE Cell Line Gene Expression Profiles	-1.0	-1.63176
EMX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1855
FOXP4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.2172
496100326_TCx_no dementia_TBI_81_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.49608
HCC515	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.29627
Sarcoma_SARC_TCGA-IS-A3K6-01A-11R-A21T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
dorsal thalamus_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.10013
hsa-miR-326	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
amygdaloid complex_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.892484
POU5F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.9436
Brain Lower Grade Glioma_LGG_TCGA-DU-7302-01A-11R-2090-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2GO-06A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ELK1::HOXA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.1779
CMK86	CCLE Cell Line Gene Expression Profiles	-1.0	-1.52473
CAL120	CCLE Cell Line Gene CNV Profiles	-1.0	-2.27597
MC116	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48864
RH18	CCLE Cell Line Gene Expression Profiles	-1.0	-2.07705
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A4NA-01A-11R-A266-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TEAD4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.7403
RAD21	ENCODE Transcription Factor Targets	1.0	null
G118	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04807
HOXB2::ELK1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.167
SPI1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hippocampus (hippocampal formation)_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.07728
CTCF_MCF-7_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PAX9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.3621
hsa-miR-3689c	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.921135
Pancreatic adenocarcinoma_PAAD_TCGA-2L-AAQA-01A-21R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
brain	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.057161
MM1S	COSMIC Cell Line Gene Mutation Profiles	1.0	null
FOXG1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.1404
hippocampus (hippocampal formation)_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.74889
NCI-H322M	COSMIC Cell Line Gene CNV Profiles	1.0	2.08108
HT55	COSMIC Cell Line Gene Mutation Profiles	1.0	null
EBC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.34229
VSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1951
cSARS Bat SRBD_72Hour_None_GSE37827	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	2.09778
Acute Myeloid Leukemia_LAML_TCGA-AB-2887-03A-01T-0735-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-330-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
HOXB5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.3579
STAT3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.4894
respiratory epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.23459
Thyroid lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.169
H-EMC-SS	COSMIC Cell Line Gene Mutation Profiles	1.0	null
496100581_TCx_probable Alzheimer's disease_TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.74085
PE/CA-PJ15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29944
H3K4me2_HeLa-S3_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
NCI-H358	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29944
cSARS Bat SRBD_36Hour_None_GSE37827	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.57504
CTCF_MCF-7_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hematopoietic system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.05136
CTCF_MCF-7_hg19_6	ENCODE Transcription Factor Binding Site Profiles	1.0	null
neuroblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.080522
olfactory epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.659491
primary somatosensory cortex (area S1, areas 3,1,2)_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.44928
HCC2911	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.50748
anterior (rostral) cingulate (medial prefrontal) cortex_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.24866
hsa-miR-3689a-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.921135
chromosomal region	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.110505
GSE172494_3_v_1_nicotinamide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
LXFL529	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.86922
DMS 53	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.65418
TE15	CCLE Cell Line Gene CNV Profiles	1.0	1.8393
HOXC8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.8124
dorsolateral prefrontal cortex_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.74889
posteroventral (inferior) parietal cortex_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.923397
NCIH28	CCLE Cell Line Gene CNV Profiles	1.0	1.51346
PANC-03-27	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CML-T1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SNU1033	CCLE Cell Line Gene Expression Profiles	-1.0	-1.52307
UMC-11	COSMIC Cell Line Gene CNV Profiles	1.0	2.08108
CAL-120	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.04873
496100517_TCx_no dementia_no TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.83024
HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.5805
inferolateral temporal cortex (area TEv, area 20)_16 pcw_M_12879	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.40096
HSF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.756
CTCF_GM19239_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HLF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.9016
OCI-LY-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18291
TLX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.9594
cerebellar cortex_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.05653
FOXO6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.892
HCC1011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.936657
BT-474	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.73815
JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.2334
HT-29	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.961273
LS123	CCLE Cell Line Gene Expression Profiles	-1.0	-1.45514
LN-405	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.04873
SK-NEP-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
A549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4374
amygdaloid complex_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.05653
GSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.1284
Bladder Urothelial Carcinoma_BLCA_TCGA-DK-A2I2-01A-11R-A180-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney Chromophobe_KICH_TCGA-KL-8342-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CTCF_MCF-7_hg19_7	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MDA-MB-330	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.886224
mediodorsal nucleus of thalamus_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.14497
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-ZJ-A8QR-01A-11R-A37O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
amygdaloid complex_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.872564
HCC1419	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.47636
ATF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.8075
LS1034	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.01648
chromosome, centromeric region	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.470005
lymphoid cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.05397
DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.8785
hippocampus (hippocampal formation)_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.938725
disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.040082
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2GB-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H2803	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.34642
GA-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.60512
hsa-miR-3916	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
WM88	CCLE Cell Line Gene CNV Profiles	1.0	1.65884
SW 1463	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29944
A704	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CTCF_HeLa-S3_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-LP-A7HU-01A-11R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CTCF_GM10266_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
tissues, cell types and enzyme sources	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052803
ISX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.6678
CHD1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MEL-JUSO	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HS939-T	COSMIC Cell Line Gene Mutation Profiles	1.0	null
striatum_13 pcw_M_12820	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.982745
PAX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.3195
496100596_FWM_dementia_TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.53789
Hajdu-Cheney syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.074
BEN	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ETV2::HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.0454
GATA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.3381
Prostate adenocarcinoma_PRAD_TCGA-HC-A76W-01A-11R-A33R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FLI1::DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.4498
Sperm head	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.17
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A1Q9-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CTCF_WERI-Rb-1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_CD14-positive monocyte_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC1806	COSMIC Cell Line Gene CNV Profiles	1.0	2.08108
primary somatosensory cortex (area S1, areas 3,1,2)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.11576
OVK-18	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HCC1599	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.61016
immune system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.04968
CTCF_GM13976_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Isolated growth hormone deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.116
UM-UC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4374
MDAMB157	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.18954
A-Netherlands-602-2009(H1N1)_0Hour_None_GSE40844	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	2.37275
NCI-H2009	COSMIC Cell Line Gene Mutation Profiles	1.0	null
A-Netherlands-602-2009(H1N1)_3Hour_None_GSE40844	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.54545
NCIH661	CCLE Cell Line Gene CNV Profiles	-1.0	-1.55657
RL95-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
forebrain	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.065804
CDX2	ChEA Transcription Factor Targets	1.0	null
HARA	COSMIC Cell Line Gene Mutation Profiles	1.0	null
corpus striatum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.229568
RAX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.4245
inferolateral temporal cortex (area TEv, area 20)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.9732
CTCF_HepG2_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DAOY	CCLE Cell Line Gene Expression Profiles	1.0	1.41081
GSE96777,GSE96778_3_v_2_zbtb4_human	RummaGEO Gene Perturbation Signatures	-1.0	null
posteroventral (inferior) parietal cortex_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.30578
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.34642
ventrolateral prefrontal cortex_19 pcw_F_12885	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.05653
JHU-011	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.04873
BT-474	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NUGC2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.78032
BFTC909	CCLE Cell Line Gene Expression Profiles	1.0	1.56237
Kidney Chromophobe_KICH_TCGA-KM-8440-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
organism form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054497
ZNF558	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	165.588
NKX6-2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9389
Rectum adenocarcinoma_READ_TCGA-AG-3731-11A-01R-1736-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
496100318_PCx_probable Alzheimer's disease_TBI_100+_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.23427
Skin Cutaneous Melanoma_SKCM_TCGA-EB-A299-01A-21R-A18U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H2AFZ_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NB7	COSMIC Cell Line Gene Mutation Profiles	1.0	null
hsa-miR-3125	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.068414
SLR21	CCLE Cell Line Gene Expression Profiles	-1.0	-1.87899
POS cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.173
HOXD9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.1507
Bladder Urothelial Carcinoma_BLCA_TCGA-K4-A3WU-01B-11R-A23N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
LB647-SCLC	COSMIC Cell Line Gene Mutation Profiles	1.0	null
lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.056696
HOXD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.7983
NCIH660	CCLE Cell Line Gene CNV Profiles	-1.0	-1.38665
BT20	CCLE Cell Line Gene Expression Profiles	1.0	2.65461
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
cerebral gyrus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.726097
SNU349	CCLE Cell Line Gene Expression Profiles	-1.0	-2.20482
DBP	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.436
Olfactory receptor neuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.064
Lung squamous cell carcinoma_LUSC_TCGA-98-8020-01A-11R-2247-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
olfactory receptor activity	GO Molecular Function Annotations 2025	1.0	null
EP300_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SUM52PE	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.973834
HOXA4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.6228
496100414_TCx_probable Alzheimer's disease_no TBI_87_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.4229
HCC-15	COSMIC Cell Line Gene Mutation Profiles	1.0	null
VAX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7124
posteroventral (inferior) parietal cortex_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.14497
Rectum adenocarcinoma_READ_TCGA-AG-3742-11A-01R-1660-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
POU3F4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7646
hsa-miR-4777-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
Thyroid follicle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.543
TE-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Head	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
LHX5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.6483
primary auditory cortex (core)_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.16106
ETV2::DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.1164
Brain Lower Grade Glioma_LGG_TCGA-DH-A669-01A-12R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Adrenocortical carcinoma_ACC_TCGA-PK-A5HB-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
gland	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.23362
cerebellar cortex_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.44702
CTCF_GM12873_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
reproductive system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.23362
hsa-miR-877	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
hsa-miR-3128	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
HDQP1	CCLE Cell Line Gene Expression Profiles	1.0	1.84966
SW579	CCLE Cell Line Gene Expression Profiles	-1.0	-1.81012
lymphoid tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052805
Esophagus - Gastroesophageal Junction	GTEx Tissue Gene Expression Profiles 2023	1.0	7.21239
KP-3	COSMIC Cell Line Gene Mutation Profiles	1.0	null
RKN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00046
Liver hepatocellular carcinoma_LIHC_TCGA-CC-5263-01A-01R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-3145-3p	TargetScan Predicted Conserved microRNA Targets	1.0	1.45615
KHM-1B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.82403
Brain Lower Grade Glioma_LGG_TCGA-HT-7471-01A-11R-2256-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FOXO1::ELF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.4236
Trunk	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.435
SIG-M5	COSMIC Cell Line Gene Mutation Profiles	1.0	null
LC-1-SQ	COSMIC Cell Line Gene Mutation Profiles	1.0	null
hsa-miR-3121-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
POU5F1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9313
TBX19	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.267
CTCF_HeLa-S3_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
UMUC1	CCLE Cell Line Gene CNV Profiles	1.0	1.69085
hsa-miR-4448	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
HCE-4	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2885-03A-01T-0735-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hand-foot-genital syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.16
FOXK2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.8527
H3K27me3_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-39-5029-01A-01R-1443-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HEY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.989681
Olfactory organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.612
PC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15118
Prostate adenocarcinoma_PRAD_TCGA-VP-A87B-01A-11R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
EBC1	CCLE Cell Line Gene CNV Profiles	1.0	1.50776
Mesothelioma_MESO_TCGA-LK-A4NW-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HOXD8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.0744
cell part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.040292
telencephalon	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.073089
MCAS	CCLE Cell Line Gene Expression Profiles	-1.0	-1.62295
Forebrain	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
ATOH7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.4869
Prostate adenocarcinoma_PRAD_TCGA-EJ-8468-01A-21R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
combined t cell and b cell immunodeficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.654067
KYSE-140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.886224
chromosome, subtelomeric region	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.308
GSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.6468
PRRX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.0886
EFM-192C	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.83406
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-Q1-A73P-01A-11R-A32P-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MDA-MB-231	COSMIC Cell Line Gene Mutation Profiles	1.0	null
H3K27me3_Mobilized CD34 Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
amygdaloid complex_37 yrs_M_12303	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.923397
hippocampus (hippocampal formation)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.67633
CTCF_GM12875_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TRIM28	ChEA Transcription Factor Targets	1.0	null
Mayer-Rokitansky-Kuster-Hauser syndrome type 2	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.431
FOXS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.7594
BARHL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.7909
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0508
SHOX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.2746
Brain Lower Grade Glioma_LGG_TCGA-DB-A75K-01A-11R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Amylin receptor complex 2	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.98
NCIH1792	CCLE Cell Line Gene CNV Profiles	1.0	1.45858
G111	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07111
SK-MEL-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ventrolateral prefrontal cortex_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.0839
NCI-H460	COSMIC Cell Line Gene CNV Profiles	1.0	2.08108