association	dataset	threshold value	standardized value
PHOX2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.9714
Lhx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.9837
HCC60	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.26921
Sensory Perception	Reactome Pathways 2024	1.0	null
SNU216	CCLE Cell Line Gene CNV Profiles	-1.0	-1.40331
Narcolepsy	HuGE Navigator Gene-Phenotype Associations	1.0	null
A4/FUK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18948
ZNF776	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.71584
NCIH596	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33569
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
Kidney renal papillary cell carcinoma_KIRP_TCGA-MH-A854-01A-11R-A355-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DUX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.3506
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GS-A9TV-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NFATC4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.8924
LS1034	DepMap CRISPR Gene Dependency	1.0	3.92716
Sox6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.6827
VAMP8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.38192
primary auditory cortex (core)_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.977104
cell surface receptor signaling pathway	GO Biological Process Annotations 2015	1.0	null
pancreas	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	2.09756
OAW42	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.06981
HOXC9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.9855
Foxj3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	56.4535
Sarcoma_SARC_TCGA-JV-A75J-01A-11R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MKN7	CCLE Cell Line Gene CNV Profiles	-1.0	-1.59881
Brain Lower Grade Glioma_LGG_TCGA-DB-5280-01A-01R-1470-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
COV318	DepMap CRISPR Gene Dependency	1.0	2.36333
Pia mater	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.798
parietal neocortex_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.855096
POU3F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.6277
Nr2e1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	36.5876
OAW28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01026
Adrenocortical carcinoma_ACC_TCGA-OR-A5JY-01A-31R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RAX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.6937
BHLHE23	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1492
Msgn1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	40.1292
CAL-120	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0746
HSC-39	COSMIC Cell Line Gene Mutation Profiles	1.0	null
G130	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.856588
BHY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.856588
YY1	MotifMap Predicted Transcription Factor Targets	1.0	null
Atrophic gastritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.267
ZNF410	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.0563
Nr1h2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	14.5394
CEBPA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.0679
Expression and translocation of olfactory receptors	Reactome Pathways 2024	1.0	null
496100391_FWM_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.1708
H3K27me3_CD4+ CD25- CD45RA+ Naive Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
ATAD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.69133
SLC16A5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57756
ETS2	MotifMap Predicted Transcription Factor Targets	1.0	null
Sox1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	54.5774
NCI-H920	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0746
DMS 454	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28879
cellular_component	LOCATE Curated Protein Localization Annotations	1.0	null
Amylin receptor complex 1	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.106
GLB1L3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.00366
SOX2-21211035-LN229-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A1EI-01A-11R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HT144SKINFV2	DepMap CRISPR Gene Dependency	1.0	2.42047
BNC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.6477
TEAD-YAP complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.304
MAFK	ENCODE Transcription Factor Targets	1.0	null
POU3F4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7938
lateral ganglionic eminence_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.11846
ZNF200	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.56968
Brain Lower Grade Glioma_LGG_TCGA-TQ-A7RV-01A-21R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Foxl2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	57.5007
CHLA90	DepMap CRISPR Gene Dependency	1.0	3.7255
CGTHW1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.63465
NR1D2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.1255
HCC1493	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.888115
HS 746T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.890537
Dmbx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	31.3955
T3M4	CCLE Cell Line Gene CNV Profiles	1.0	1.52867
Signaling by GPCR	Reactome Pathways 2014	1.0	null
NCI-H1666	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.83153
496100367_FWM_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.68243
primary visual cortex (striate cortex, area V1/17)_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.10222
Lhx8	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	27.5438
VMRC-LCD	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.36233
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2MU-06A-21R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
anterior (rostral) cingulate (medial prefrontal) cortex_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.2436
Nfatc1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.3754
Ppara	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	21.7522
TRPS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.224
Pax7	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	95.255
inferolateral temporal cortex (area TEv, area 20)_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.76264
gastrointestinal tract	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.216528
spinalcordlower	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.24248
HCC4017	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.911395
HOXD11	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.9431
posterior (caudal) superior temporal cortex (area 22c)_26 pcw_F_12949	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.886959
animal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.050973
Thap11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	51.5864
HUH1	CCLE Cell Line Gene CNV Profiles	1.0	1.42135
BT20	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.899235
Kidney renal clear cell carcinoma_KIRC_TCGA-AS-3777-01A-01R-0864-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FOXE1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	58.9827
g-protein coupled receptor activity	GO Molecular Function Annotations 2015	1.0	null
NLRP1 inflammasome complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.916
SNU-601	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.49863
Skin Cutaneous Melanoma_SKCM_TCGA-EB-A431-01A-11R-A266-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cell periphery	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
g-protein coupled receptor signaling pathway	GO Biological Process Annotations 2015	1.0	null
H3K9me3_Mobilized CD34 Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
H3K27me3_CD14-positive monocyte_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC2998	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MC-IXC	COSMIC Cell Line Gene Mutation Profiles	1.0	null
H3K27me3_Adult Liver	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
JDP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.3478
dorsolateral prefrontal cortex_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.978643
cerebellar cortex_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.975183
Stat5b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	49.0873
MEL-HO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.83153
PMC12616242-can-24-3452_supplementary_table_s2_suppst2.xlsx-Up_bins-Up_bins_gaining_H3K27me3_in_hpMSC-EWSR1_FLI1_FLI1	Rummagene Transcription Factor Associations 2026	1.0	null
orbital frontal cortex_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.956181
IGR39	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44037
BACH1	ENCODE Transcription Factor Targets	1.0	null
KMS26	CCLE Cell Line Gene CNV Profiles	-1.0	-2.35787
PPP2R5B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.13519
inferolateral temporal cortex (area TEv, area 20)_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.866641
Cell periphery	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
496100472_PCx_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.25669
NCI-H1993	COSMIC Cell Line Gene Mutation Profiles	1.0	null
olfactory receptor activity	GO Molecular Function Annotations 2023	1.0	null
Hoxd13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	51.6408
Calcitonin family receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.829
SK-MEL-28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.827484
SNU16	DepMap CRISPR Gene Dependency	1.0	2.47741
FOXL1	JASPAR Predicted Transcription Factor Targets	1.0	null
MDN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.44617
plasma membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
EZH2_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-21-5782-01A-01R-1635-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KG1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.61655
NR3C1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.0482
Hmx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	45.8202
Kidney Chromophobe_KICH_TCGA-KL-8345-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Gata3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.8195
striatum_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.33268
Arid5a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	61.5064
NUDHL1	CCLE Cell Line Gene CNV Profiles	1.0	1.39061
SLC25A46	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.83538
posterior (caudal) superior temporal cortex (area 22c)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.90914
Foxf1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	27.5394
RND1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.3411
DBP	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.2567
Lef1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	48.3932
SMAD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.5656
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.976591
mediodorsal nucleus of thalamus_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.11846
SK-BR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0593
NCI-H522	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.20879
PARP2_KD_GSE43981_676_human_HepG2	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
RCOR1	ChEA Transcription Factor Targets	1.0	null
Crx	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	29.3695
Yy1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	29.1598
hippocampus (hippocampal formation)_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.967454
trachea	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.33052
CL-40	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.40413
cell part	LOCATE Curated Protein Localization Annotations	1.0	null
ZBTB32	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.4152
GATA4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.2392
UMC-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.888115
Olfactory transduction	KEGG Pathways 2026	1.0	null
anterior (rostral) cingulate (medial prefrontal) cortex_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.16167
signal transduction	GO Biological Process Annotations 2015	1.0	null
DANG	DepMap CRISPR Gene Dependency	1.0	2.47472
MEF2C	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	49.923
496100419_TCx_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	6.55771
Head and Neck squamous cell carcinoma_HNSC_TCGA-P3-A6T3-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05343
NUGC-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.824745
integral component of membrane	GO Cellular Component Annotations 2015	1.0	null
EZH2_fibroblast of dermis_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Mecom	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	69.4815
NCIH1792	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36167
Brain Lower Grade Glioma_LGG_TCGA-HT-7479-01A-11R-2027-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
upper (rostral) rhombic lip_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.33268
primary visual cortex (striate cortex, area V1/17)_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.975183
ZNF354A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	88.5345
TCF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.4485
Rarb	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	76.6751
Foxo3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	38.8812
Prostate adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.027
HUP-T3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.61572
HCC38	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.588648
intrinsic component of membrane	GO Cellular Component Annotations 2015	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-SX-A7SP-01A-11R-A355-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PGR	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.0258
HCC2935	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.826626
HPAC	CCLE Cell Line Gene CNV Profiles	-1.0	-2.87576
HCC1806	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01026
ACHN	CCLE Cell Line Gene CNV Profiles	1.0	1.73557
HUH-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46273
Acute Myeloid Leukemia_LAML_TCGA-AB-2824-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
mediodorsal nucleus of thalamus_16 pcw_M_12879	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.975183
TE10	CCLE Cell Line Gene CNV Profiles	1.0	2.03953
HT-115	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13226
MEF2D	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	71.1466
496100426_PCx_no dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.50086
striatum_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.15744
SKLU1	CCLE Cell Line Gene CNV Profiles	1.0	1.59106
primary auditory cortex (core)_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.03308
Alx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	53.7385
H3K27me3_CD3 Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
thyroid	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.23243
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.41629
biological regulation	GO Biological Process Annotations 2015	1.0	null
PNT-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.042
RT112	DepMap CRISPR Gene Dependency	1.0	2.35834
Ebf2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	39.6539
ChIP_CDX2_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
JL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.09405
NCI-H1693	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.49863
Nanog	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.9695
ARID5A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77137
ACHN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.824745
SOX21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.1217
primary somatosensory cortex (area S1, areas 3,1,2)_13 pcw_M_12820	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.975183
Skin Cutaneous Melanoma_SKCM_TCGA-D9-A4Z3-01A-11R-A266-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4691-01A-01R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TBX21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.3164
PAX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.6887
membrane	LOCATE Predicted Protein Localization Annotations	1.0	null
Gfi1b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.8859
Msx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	45.5774
NCIH1568	DepMap CRISPR Gene Dependency	1.0	3.3962
GATA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.8565
disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.040608
Olfactory nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.683
mainolfactoryepithelium.MOE.	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.969246
PMC12224929-ADVS-12-2416784-s006.xlsx-DEG_circGLIS3_KD-Unnamed_6_AR	Rummagene Transcription Factor Associations 2026	1.0	null
ZNF143_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
OMM25	DepMap CRISPR Gene Dependency	1.0	3.19603
detection of stimulus	GO Biological Process Annotations 2015	1.0	null
Hmga1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	91.3682
anterior (rostral) cingulate (medial prefrontal) cortex_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.53917
JJN-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.912277
PMC11923433-BLOOD_BLD-2024-025618-mmc2.xlsx-S3_Specific_genes_in_CEBPA-dm-Supplemental_Table_3_The_subtype-specific_enriched_marker_genes_in_CEBPA-dm_subtype_patients_CEBPA	Rummagene Transcription Factor Associations 2026	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-FG-A87N-01A-11R-A36H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HOXB9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.3641
NCI-H226	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.987034
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4994-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Adrenocortical carcinoma_ACC_TCGA-OR-A5LE-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-G9-6347-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FOXB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	52.0745
amygdaloid complex_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.864404
OVCA 420	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.856588
Nobox	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	34.0789
cervix uteri	GTEx Tissue Gene Expression Profiles	1.0	1.0127
cell part	GO Cellular Component Annotations 2015	1.0	null
NCI-H1437	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46273
PPIP5K2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50307
posteroventral (inferior) parietal cortex_10 mos_M_12977	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.59936
detection of chemical stimulus	GO Biological Process Annotations 2015	1.0	null
HCC515	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28879
NCIH1385	CCLE Cell Line Gene CNV Profiles	1.0	1.39437
dorsolateral prefrontal cortex_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.33268
EJM	CCLE Cell Line Gene CNV Profiles	-1.0	-1.45582
NCI-H1568	COSMIC Cell Line Gene Mutation Profiles	1.0	null
RAC3-21632823-H3396-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.40413
A-Vietnam-1203_CIP048_RG4-2004(H5N1)PB2-627E_7day-MOI-10^4_None_GSE43301	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.56179
HCC1428	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.909072
amygdaloid complex_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.62466
intrinsic component of membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
EZH2	ENCODE Transcription Factor Targets	1.0	null
NCI-H820	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05872
HOXC10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.0007
JM1	CCLE Cell Line Gene CNV Profiles	1.0	3.20888
SOX15	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.2167
DND-41	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H2135	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.911903
PRDM1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.6732
SK-N-FI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.29212
embryonic stem no feeder	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-2.34587
496100416_FWM_dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.36041
Kidney renal papillary cell carcinoma_KIRP_TCGA-GL-7966-01A-11R-2204-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pou5f1::Sox2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	80.9217
A-Vietnam-1203_CIP048_RG3-2004(H5N1)PB1-F2del_4day-MOI-10^4_None_GSE44441	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.90568
Sox7	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	28.1144
Arid3a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	39.9259
primary somatosensory cortex (area S1, areas 3,1,2)_10 mos_M_12977	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.24423
BACH1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.1265
HMBS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.10596
PMC12019518-ao5c02459_si_002.xlsx-Table_S3-Table_S3_Screening_of_genes_that_are_commonly_upregulated_in_cells_on_stiff_substrate_and_down-regulated_by_KD_of_UBE2A_B_AR	Rummagene Transcription Factor Associations 2026	1.0	null
LOX-IMVI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.83153
SNU213	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34656
RPMI-7951	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33861
KU812	DepMap CRISPR Gene Dependency	1.0	3.16174
Olfactory tract	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.681
gastrointestinal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.056808
KYSE-140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18157
Brain Lower Grade Glioma_LGG_TCGA-E1-5311-01A-01R-1470-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF35	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.8914
RWDD2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.37059
primary visual cortex (striate cortex, area V1/17)_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.975183
preoptic	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.23618
OVCAR8	DepMap CRISPR Gene Dependency	1.0	3.03855
tissues, cell types and enzyme sources	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.050857
SKM1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.98613
COLO 699	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.900132
membrane part	GO Cellular Component Annotations 2015	1.0	null
Amylin receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.017
Plasma membrane	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
receptor activity	GO Molecular Function Annotations 2015	1.0	null
Nr2e3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	30.9565
Genetic Predisposition to Disease	HuGE Navigator Gene-Phenotype Associations	1.0	null
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.59841
disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.039682
primary auditory cortex (core)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	3.12605
H3K4me1_HepG2_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
SNU761	DepMap CRISPR Gene Dependency	1.0	2.41064
HSF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.9804
SU-DHL-8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13226
BCOR-27268052-CHIP-SEQ-BCELLS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
HCC1569	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23792
SLC38A4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.34169
spleen	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.46357
striatum_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.00452
NCI-H2170	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.856588
Olfactory Signaling Pathway	Reactome Pathways 2014	1.0	null
SW 620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04208
HCC2302	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.69442
OCILY18	DepMap CRISPR Gene Dependency	1.0	2.51164
A4FUK	CCLE Cell Line Gene CNV Profiles	1.0	2.38295
Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A6H0-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NKM-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HOXD10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.0779
FEZF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.52078
NCI-H889	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.57895
FOSL1::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.621
KMS11	DepMap CRISPR Gene Dependency	1.0	7.67393
HOXC13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.3788
KMS-34	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.79441
MDA-PCa-2b cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.385
ZNF766	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.2089
plasma membrane	LOCATE Curated Protein Localization Annotations	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-TQ-A7RP-01A-21R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MKN-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23792
EFM-192A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.83153
hippocampus (hippocampal formation)_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.932029
membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
HCC1954	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0593
Head and Neck squamous cell carcinoma_HNSC_TCGA-H7-A76A-01A-51R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
EPLC-272H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.832551
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.66825
olfactory receptor activity	GO Molecular Function Annotations 2025	1.0	null
Nkx3-2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	52.174
BGC823	CCLE Cell Line Gene CNV Profiles	1.0	1.42573
inferolateral temporal cortex (area TEv, area 20)_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.948951
DMS 79	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.45774
amygdaloid complex_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.15479
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A3BZ-06A-12R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Nr5a2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	19.2248
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2M7-06A-11R-A18U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Dlx2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	35.1569
FU-OV-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HOXD12	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.0916
SUM52PE	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.24
KOPN-8	COSMIC Cell Line Gene Mutation Profiles	1.0	null
plasma membrane	LOCATE Predicted Protein Localization Annotations	1.0	null
KM-H2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Ikzf3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.5883
Pheochromocytoma and Paraganglioma_PCPG_TCGA-P7-A5NX-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
JVM3	CCLE Cell Line Gene CNV Profiles	1.0	1.44263
LOVO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13539
H3K27me3_mononuclear cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.308974
posterior (caudal) superior temporal cortex (area 22c)_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.09581
SKMEL19	DepMap CRISPR Gene Dependency	1.0	2.75713
HCC3153	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.677506
integument	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051941
NCIH2106	CCLE Cell Line Gene CNV Profiles	-1.0	-1.56689
MXI1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
alimentary canal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.064183
TBXT	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.27
184A1N4	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.935795
Lung squamous cell carcinoma_LUSC_TCGA-98-A53B-01A-11R-A262-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pparg::Rxra	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	42.3919
Pancreatic adenocarcinoma_PAAD_TCGA-IB-7646-01A-11R-2156-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SU-DHL-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.29386
primary somatosensory cortex (area S1, areas 3,1,2)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.18137
COLO-783	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.911395
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A2JB-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
gastric mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.774419
anterior (rostral) cingulate (medial prefrontal) cortex_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.38628
SKNFI	DepMap CRISPR Gene Dependency	1.0	6.28863
RFX5_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
detection of stimulus involved in sensory perception	GO Biological Process Annotations 2015	1.0	null
SW1573	DepMap CRISPR Gene Dependency	1.0	3.8517
biological_process	GO Biological Process Annotations 2015	1.0	null
Leukemia	DisGeNET Gene-Disease Associations	1.0	null
ZNF143	ENCODE Transcription Factor Targets	1.0	null
496100466_PCx_probable Alzheimer's disease_no TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.08771
KP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.37787
RCOR1-19997604-NEURONS-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
pyrazinamide_mus musculus_gpl6246_gse48027	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
regulation of cellular process	GO Biological Process Annotations 2015	1.0	null
Runx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	24.0595
PANC0327	CCLE Cell Line Gene CNV Profiles	1.0	1.83851
BUB3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.7334
Brain Lower Grade Glioma_LGG_TCGA-E1-A7YV-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SH10TC	CCLE Cell Line Gene CNV Profiles	-1.0	-1.50283
Brain Lower Grade Glioma_LGG_TCGA-FG-8186-01A-11R-2256-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HOXC11	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.3462
amygdaloid complex_16 pcw_M_12879	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.855096
DAN-G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05343
HGC-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.976591
Pseudoxanthoma elasticum	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.035
PMC3348545-NIHMS263168-supplement-3.pdf-299-RARG_RARG	Rummagene Transcription Factor Associations 2026	1.0	null
Membrane	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
hippocampus (hippocampal formation)_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.11846
CDX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.015
COLO 829	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10827
posterior (caudal) superior temporal cortex (area 22c)_16 pcw_M_12287	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.855096
mediodorsal nucleus of thalamus_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.37986
regulation of biological process	GO Biological Process Annotations 2015	1.0	null
transmembrane signaling receptor activity	GO Molecular Function Annotations 2015	1.0	null
orbital frontal cortex_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.2436
JL1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.19005
signal transducer activity	GO Molecular Function Annotations 2015	1.0	null
primary visual cortex (striate cortex, area V1/17)_10 mos_M_12977	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.65692
temporal neocortex_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.33268
MHH-ES-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13226
HCC1011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08626
NCIH2110	CCLE Cell Line Gene CNV Profiles	1.0	1.4725
membrane	GO Cellular Component Annotations 2015	1.0	null
primary somatosensory cortex (area S1, areas 3,1,2)_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.8349
SNU-387	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.49863
Brain Lower Grade Glioma_LGG_TCGA-FN-7833-01A-11R-2090-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Foxo1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	38.3726
PSMC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.10003
STAT1::STAT2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.7129
MJ	DepMap CRISPR Gene Dependency	1.0	3.79302
Shox2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	44.6835
MDAMB453	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.856209
Nr2f6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	76.153
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A7CK-01A-11R-A32P-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K27me3_Treg Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
G protein-coupled receptor, rhodopsin-like	InterPro Predicted Protein Domain Annotations	1.0	null
ventrolateral prefrontal cortex_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.11846
NCIH660	CCLE Cell Line Gene CNV Profiles	1.0	1.99165
plasma membrane	GO Cellular Component Annotations 2015	1.0	null
LS-180	COSMIC Cell Line Gene Mutation Profiles	1.0	null
POU2F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.0051
PSN1	DepMap CRISPR Gene Dependency	1.0	3.1924
posterior (caudal) superior temporal cortex (area 22c)_10 mos_M_12977	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.04689
EJM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05343
Ethmoid bone	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.85
SOX9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.7368
JEKO1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.81436
KP-1N	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5083-01A-02R-1420-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HCC70	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14522
Hnf1a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	45.7694
POU3F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.8829
IRX6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.97114
HOKUG	DepMap CRISPR Gene Dependency	1.0	2.01729
embryoday7.5	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	0.899284
NCI-H1648	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.95368
NCI-H2106	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.56318
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
GPCR downstream signaling	Reactome Pathways 2014	1.0	null
CEBPD	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.6707
SRF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.0957
MAFK_ES-E14_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
REC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46724
DUXA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.8806
Kidney renal papillary cell carcinoma_KIRP_TCGA-DZ-6134-01A-11R-1965-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
REST	ChEA Transcription Factor Targets	1.0	null
MIA PACA-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.912277
membrane	LOCATE Curated Protein Localization Annotations	1.0	null
SNU1196	DepMap CRISPR Gene Dependency	1.0	2.18503
Alx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	77.711
Nkx2-1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.8856
detection of chemical stimulus involved in sensory perception of smell	GO Biological Process Annotations 2015	1.0	null
Hoxa11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.4499
HPAF-II	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.02867
E2F2-33952803-PATIENT-HUMAN-SYNOVIUM	ChEA Transcription Factor Targets 2022	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-A3-3335-01A-01R-0864-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SW900	COSMIC Cell Line Gene Mutation Profiles	1.0	null
viscus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.055829
Kidney renal clear cell carcinoma_KIRC_TCGA-A3-3352-01A-01R-0864-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
inferolateral temporal cortex (area TEv, area 20)_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.62466
Skin Cutaneous Melanoma_SKCM_TCGA-FS-A1ZQ-06A-11R-A18U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
496100458_FWM_no dementia_no TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.13487
Stat4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.4058
IST-SL2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
IRF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	62.5
SK-MEL-30	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Nfatc2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	30.9114
hippocampus (hippocampal formation)_13 pcw_M_12820	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.855096
Arterial calcification of infancy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.234
Cribriform plate	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.866
LIPE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.54963
POU2F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.2993
U343	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32083
ONECUT3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	61.3593
SNU213	DepMap CRISPR Gene Dependency	1.0	2.365
HUH7	DepMap CRISPR Gene Dependency	1.0	2.40645
VMRCLCD	CCLE Cell Line Gene CNV Profiles	1.0	2.20403
ML-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.64064
anterior (rostral) cingulate (medial prefrontal) cortex_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.855096
Brain Lower Grade Glioma_LGG_TCGA-DU-7306-01A-11R-2090-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SNU869	DepMap CRISPR Gene Dependency	1.0	2.00198
TEAD2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.631
SNU-216	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.826626
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
Irf1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	84.3368
POU1F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	67.8603
primary visual cortex (striate cortex, area V1/17)_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.43064
FOXD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	80.0259
MDAMB361	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.34905
fertilizedegg	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	0.824366
UCSD-242L	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.900132
95T1000	DepMap CRISPR Gene Dependency	1.0	10.7761
Sarcoma_SARC_TCGA-DX-A3LY-01B-11R-A27Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.976591
EZH2_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ZNF558	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	177.924
NCIH1105	CCLE Cell Line Gene CNV Profiles	-1.0	-1.76469
SUM159PT	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.918172
BT-549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.40682
A704	CCLE Cell Line Gene CNV Profiles	1.0	1.47343
DMRTA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.8965
Arid3b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	68.5378
anterior (rostral) cingulate (medial prefrontal) cortex_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.2436
496100469_TCx_no dementia_TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.99952
atrophic gastritis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.08076
HNF1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.8073
primary motor cortex (area M1, area 4)_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.05864
H513	COSMIC Cell Line Gene Mutation Profiles	1.0	null
RKN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.25396
DMS454	CCLE Cell Line Gene CNV Profiles	1.0	1.44589
primary somatosensory cortex (area S1, areas 3,1,2)_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.42801
BT549	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.58163
bonemarrow	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.06147
STAT3_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC1954	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.43896
Erg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	34.1585
hippocampus (hippocampal formation)_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.33268
BCL6B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.7261
KMS-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.17999
posterior (caudal) superior temporal cortex (area 22c)_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.16583
response to stimulus	GO Biological Process Annotations 2015	1.0	null
OCI-LY-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13226
striatum_13 pcw_M_12820	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.855096
BHY	DepMap CRISPR Gene Dependency	1.0	2.56554
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A183-06A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H1944	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26392
Contrast sensitivity	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.530103
496100460_TCx_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.60397
Ptf1a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	62.1959
integral component of membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
Nfat5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	42.4466
Hoxa13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	51.0917
PMC8046804-41467_2021_22478_MOESM11_ESM.xlsx-Del_AA-TCGA-Unnamed_42_TEAD1	Rummagene Transcription Factor Associations 2026	1.0	null
Varicosity	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.197
PPARG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.8571
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A6JN-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
primary auditory cortex (core)_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.4195
NCI-H596	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10827
JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.0771
MEF2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	48.0819
TBCD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.15795
NCI-H146	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18157
CBC22 (MLST8)	NURSA Protein Complexes	1.0	null
inferolateral temporal cortex (area TEv, area 20)_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.03391
dorsolateral prefrontal cortex_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.975183
JEKO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.61572
KMS34	CCLE Cell Line Gene CNV Profiles	1.0	1.72423
NCI-H1355	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04208
PMC7481169-277_2020_4194_MOESM7_ESM.xlsx-RUNX1_R174L-Unnamed_1_RUNX1	Rummagene Transcription Factor Associations 2026	1.0	null
H3K27me3_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Olfactory receptor	InterPro Predicted Protein Domain Annotations	1.0	null
496100421_PCx_probable Alzheimer's disease_TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.40625
MDAMB134VI	CCLE Cell Line Gene CNV Profiles	1.0	1.62252
POU5F1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.6238
Head and Neck squamous cell carcinoma_HNSC_TCGA-QK-A6VC-01A-23R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BC-3	COSMIC Cell Line Gene Mutation Profiles	1.0	null
FOSL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.5733
REST-19997604-NEURONS-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
molecular transducer activity	GO Molecular Function Annotations 2015	1.0	null
whole body	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.050973
FU97	DepMap CRISPR Gene Dependency	1.0	2.15175
Brain Lower Grade Glioma_LGG_TCGA-DU-8163-01A-11R-2256-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
posteroventral (inferior) parietal cortex_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.02117
Brain Lower Grade Glioma_LGG_TCGA-HW-8319-01A-11R-2404-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Dlx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	41.9361
22RV1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
membrane part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
dorsolateral prefrontal cortex_16 pcw_M_12879	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.975183
HSF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.0892
TGBC18TKB	DepMap CRISPR Gene Dependency	1.0	2.08761
BARX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.5984
anterior (rostral) cingulate (medial prefrontal) cortex_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.965807
NCI-H2110	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.87538
OVMANA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.988305
Stat2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	122.539
BACH1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KMS11	CCLE Cell Line Gene CNV Profiles	1.0	2.53724
Kidney renal clear cell carcinoma_KIRC_TCGA-G6-A5PC-01A-11R-A33J-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Atoh1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	52.2783
G122	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10915
PBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.9247
Hmx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	45.9861
primary somatosensory cortex (area S1, areas 3,1,2)_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.837306
olfactory receptor activity	GO Molecular Function Annotations 2015	1.0	null
Olfactory Signaling Pathway	Reactome Pathways 2024	1.0	null
DPPA4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78154
POU4F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.2861
Nfe2l2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	28.5785
KP2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.46434
signaling receptor activity	GO Molecular Function Annotations 2015	1.0	null
Sox17	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	33.0481
MEF2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	70.1628
P63-20808887-KERATINOCYTES-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
cellular_component	GO Cellular Component Annotations 2015	1.0	null
537 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.8015
detection of chemical stimulus involved in sensory perception	GO Biological Process Annotations 2015	1.0	null
dorsolateral prefrontal cortex_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.855096
Signal Transduction	Reactome Pathways 2014	1.0	null
KON	DepMap CRISPR Gene Dependency	1.0	2.18489
CDX2-19796622-MESC-mouse	ChEA Transcription Factor Binding Site Profiles	1.0	null
Olfactory gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.327
Nkx3-1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	22.5448
MXI1	ENCODE Transcription Factor Targets	1.0	null
narcolepsy	GAD Gene-Disease Associations	1.0	null
CORL105	CCLE Cell Line Gene CNV Profiles	-1.0	-1.87623
PBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.3333
HCC33	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.45774
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6943-11A-01R-1915-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CDX2	ChEA Transcription Factor Targets	1.0	null
HOXD9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.3718
RPMI7951	DepMap CRISPR Gene Dependency	1.0	2.03639
DMS79	CCLE Cell Line Gene CNV Profiles	-1.0	-1.7317
A-427	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.900132
PANC 03.27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.900132
TUBG2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.64816
MDA-MB-468	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.911395
molecular_function	GO Molecular Function Annotations 2015	1.0	null
496100409_FWM_no dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.07917
Elf5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	42.2187
Cellular anatomical entity	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
SPIC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.249
H3K27me3_Peripheral Blood Mononuclear Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
HS578T	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.51042
COLO824	DepMap CRISPR Gene Dependency	1.0	10.6006
HS-SULTAN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13539
GTL-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.900132
YAE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.5319
posteroventral (inferior) parietal cortex_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.855096
NR3C2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.3111
JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.8068
primary motor cortex (area M1, area 4)_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.14
Dlx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	41.1306
PMC8766486-42003_2021_2990_MOESM3_ESM.xlsx-ST18-Supplementary_Data_18_Gene_burden_for_deletions_by_subtype_ST18	Rummagene Transcription Factor Associations 2026	1.0	null
Tcf21	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	36.2847
Lung squamous cell carcinoma_LUSC_TCGA-43-3394-01A-01R-0980-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF211	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.9584
Rxra	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	28.806
MDAMB436	CCLE Cell Line Gene CNV Profiles	-1.0	-1.52641
primary somatosensory cortex (area S1, areas 3,1,2)_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.45292
ZSCAN4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.1826
stomach disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.694702
RFX5	ENCODE Transcription Factor Targets	1.0	null
TRIB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92384
Arx	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	67.1366
Stat5a::Stat5b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	52.9166
POU2F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.4565
Refractive error	GWAS Catalog SNP-Phenotype Associations 2025	1.0	10.0
SKNFI	CCLE Cell Line Gene CNV Profiles	1.0	1.33446
SJSA1	DepMap CRISPR Gene Dependency	1.0	2.613
POU3F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.8429
posterior (caudal) superior temporal cortex (area 22c)_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.18739
GATA6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.516
HOXC12	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.2111
dorsolateral prefrontal cortex_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.11846
Hmx2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	81.7735
Lhx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	176.7
ovary	GTEx Tissue Gene Expression Profiles	1.0	0.887441
Prostate epithelium cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.796
HPAFII	CCLE Cell Line Gene CNV Profiles	1.0	1.79971
gastritis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.791311
SRY	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.2143
VCaP cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.74
Hic1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	22.213
CAKI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.832551
MDST8	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GPCR, rhodopsin-like, 7TM	InterPro Predicted Protein Domain Annotations	1.0	null
SK-N-DZ	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.939165
Dlx5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	35.546
MDA-MB-231	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.856588
Stat5a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	64.6442
primary auditory cortex (core)_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.33268
dg1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.181
dorsolateral prefrontal cortex_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.22918
CW-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HUPT3	CCLE Cell Line Gene CNV Profiles	-1.0	-2.01941
RDM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.59999
NB13	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SKM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.76383
abomasum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.759914
Foxj2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	29.435
KMS-11	COSMIC Cell Line Gene Mutation Profiles	1.0	null
KYO1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.88124
REC1	CCLE Cell Line Gene CNV Profiles	1.0	1.79885
496100418_TCx_no dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	7.65926
GATA1::TAL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.1388
T47D	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.74436
TEF-1	MotifMap Predicted Transcription Factor Targets	1.0	null
HCC1143	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.71357
Sox5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.4597
SNU-C5	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-CU-A3KJ-01A-11R-A21D-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FOS::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.4367
FOXC1	JASPAR Predicted Transcription Factor Targets	1.0	null
DMRTC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.3514
U2OS	DepMap CRISPR Gene Dependency	1.0	2.70582
496100420_PCx_probable Alzheimer's disease_no TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.69967
Sox11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	40.9617
MEWO	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SK-MES-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.912277
Ebf4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	35.2154
retina	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.963537
IGR37	CCLE Cell Line Gene CNV Profiles	-1.0	-1.6996
PMC7592539-12885_2020_7456_MOESM4_ESM.xlsx-Sup_TableS3_LMS_del_genes_conf-12q13_11_TP63	Rummagene Transcription Factor Associations 2026	1.0	null
EZH2_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SKNMC	DepMap CRISPR Gene Dependency	1.0	3.82298
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.832551
ISL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.4555
HCC202	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.997592
NCIH1355	CCLE Cell Line Gene CNV Profiles	1.0	1.88295
cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
ONECUT1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.0689
TLX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4253
NCI-H1838	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.912277
TNFSF12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.19886
cell part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
STAT3	ENCODE Transcription Factor Targets	1.0	null
stomach	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.539793
496100459_PCx_no dementia_no TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.35003