association	dataset	threshold value	standardized value
membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5001-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cone-rod dystrophy 9	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.766
Dlx5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	22.9843
excretory gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053215
vascular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054732
Cell periphery	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
496100421_PCx_probable Alzheimer's disease_TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.46858
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
MEOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.4941
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.978142
Nucleolus organizer region	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.108
REST	ChEA Transcription Factor Targets	1.0	null
BCL6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.7649
olfactorybulb	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.17439
dg2	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.802
ONECUT3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	54.7633
DUXA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	62.5881
mediodorsal nucleus of thalamus_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.884805
OVCA 420	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.871627
496100469_TCx_no dementia_TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.27943
NCIH1373	DepMap CRISPR Gene Dependency	1.0	2.45453
786-0	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NR4A1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.0372
Skin Cutaneous Melanoma_SKCM_TCGA-FS-A1ZQ-06A-11R-A18U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
pituitary	GTEx Tissue Gene Expression Profiles	-1.0	-0.890662
EZH2_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
neurological system process	GO Biological Process Annotations 2015	1.0	null
molecular transducer activity	GO Molecular Function Annotations 2015	1.0	null
SF126	DepMap CRISPR Gene Dependency	1.0	6.36259
FOXA2	ENCODE Transcription Factor Targets	1.0	null
amygdaloid complex_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.01277
biological regulation	GO Biological Process Annotations 2015	1.0	null
NCI-H1355	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04408
TAL1-22897851-JUKARTE6-1-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
H3K27me3_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PAX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	78.6933
HCC1143	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.14273
Retinal macular dystrophy 2	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.485
FOXA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.5061
MCF10F	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-2.11908
cell property	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.477367
EZH2_mammary epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Creb5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	21.2418
organelle membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.047723
a11	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.464
HCC2935	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.840991
CDX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.9245
SPI1	ChEA Transcription Factor Targets	1.0	null
Sox5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	28.8629
ZNF211	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.398
Liver hepatocellular carcinoma_LIHC_TCGA-QA-A7B7-01A-11R-A32O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HOXA10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.1316
MDA-MB-468	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.927641
Pleated septate junction	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.244
CFPAC1	DepMap CRISPR Gene Dependency	1.0	2.02748
MESD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75089
Nucleolar chromatin	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.964
cell part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.040889
DU-145	COSMIC Cell Line Gene Mutation Profiles	1.0	null
mediodorsal nucleus of thalamus_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.05652
FOXH1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.856
TEF-1	MotifMap Predicted Transcription Factor Targets	1.0	null
VAChT_KD_GDS4325_361_mouse_Heart from C57BL/6 males	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
Tectum mesencephali	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.169
KYSE-140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18511
HME1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.693
KM12	DepMap CRISPR Gene Dependency	1.0	2.35093
cerebellar cortex_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.93868
response to stimulus	GO Biological Process Annotations 2015	1.0	null
COLO 699	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.901341
NCI-H596	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13047
Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7JV-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TEF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.9292
H3K27me3_mononuclear cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HS-SULTAN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13836
POU2F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.2953
intrinsic component of membrane	GO Cellular Component Annotations 2015	1.0	null
RIOX2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.14777
Disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.214
vh2	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.706
LBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.9558
Skin Cutaneous Melanoma_SKCM_TCGA-ER-A194-01A-11R-A18U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
EN1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.3172
OUMS-23	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Hoxa13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	50.8382
ventrolateral prefrontal cortex_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.36807
HOXD9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.7399
DUX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.9359
CMK115	DepMap CRISPR Gene Dependency	1.0	3.46517
Pheochromocytoma and Paraganglioma_PCPG_TCGA-PR-A5PH-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FOXA2_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7102-01A-11R-2016-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SNU475	DepMap CRISPR Gene Dependency	1.0	2.40179
POLR2A	ENCODE Transcription Factor Targets	1.0	null
Cataract 21 multiple types	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.427
striatum_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.901056
ventrolateral prefrontal cortex_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.49361
HNF1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	62.099
NCI-H820	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.06085
Synaptic vesicle, readily releasable pool	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.955
NKX6-2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.6267
dorsolateral prefrontal cortex_19 pcw_F_12885	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.62313
stomach	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.03269
NR1I3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.8912
ZNF8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	98.0743
RAX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.0216
intracellular part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.042619
melan-a cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.674
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4986-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CEBPA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7416
FOXA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.5101
PHOX2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	98.1909
doxorubicin_homo sapiens_gpl6947_gse25741	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Contrast sensitivity	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.530103
primary visual cortex (striate cortex, area V1/17)_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.08009
HOXA3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.3407
Nobox	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	30.1316
embryoday6.5	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	0.932235
A_CA_04_2009_7dayMOI-10^3_None_GSE37569	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.47055
HCC1954	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07956
female reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053153
BHLHE22	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.798
G protein-coupled receptor, rhodopsin-like	InterPro Predicted Protein Domain Annotations	1.0	null
POU4F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	59.5025
BARHL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.7909
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A3AH-06A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RAX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.3701
SNU213	CCLE Cell Line Gene CNV Profiles	-1.0	-1.40265
NCI-H716	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PMC12619835-41467_2025_66007_MOESM8_ESM.xlsx-Basal_KLF5_peaks-Nearest_Ensembl_KLF5	Rummagene Transcription Factor Associations 2026	1.0	null
MERO48A	DepMap CRISPR Gene Dependency	1.0	2.03672
membrane part	GO Cellular Component Annotations 2015	1.0	null
JM1	CCLE Cell Line Gene CNV Profiles	1.0	3.2107
bonemarrow	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	0.829214
H3K27me3_bronchial epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
membrane	GO Cellular Component Annotations 2015	1.0	null
SKBR3	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.20394
molecular_function	GO Molecular Function Annotations 2015	1.0	null
sensory perception of chemical stimulus	GO Biological Process Annotations 2015	1.0	null
FOXO6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.8063
MAF::NFE2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.3642
organism form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.214202
SIRT3_KO_GDS4817_417_mouse_liver	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
Breast disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.003
urogenital system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.050849
NCIH660	CCLE Cell Line Gene CNV Profiles	1.0	2.04484
KMS-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.18598
BOKU	DepMap CRISPR Gene Dependency	1.0	3.43426
NCIH1355	CCLE Cell Line Gene CNV Profiles	1.0	1.93841
H3K27me3_CD34 Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
HOXB4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.6389
KYO1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.12183
PHOX2B-30127528-KELLY-HUMAN-BRAINNEUROBLASTOMA	ChEA Transcription Factor Targets 2022	1.0	null
KDM5A_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hippocampus (hippocampal formation)_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.12663
H4K20me1_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
EVX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.9472
TAF2-19829295-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
CAL-120	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09542
NCI-H1666	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.832877
HDMYZ	DepMap CRISPR Gene Dependency	1.0	3.10653
HCC70	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34198
receptor activity	GO Molecular Function Annotations 2015	1.0	null
SW1573	DepMap CRISPR Gene Dependency	1.0	2.96662
EJM	CCLE Cell Line Gene CNV Profiles	-1.0	-1.53187
TFAP2A	ChEA Transcription Factor Targets	1.0	null
Sarcoma_SARC_TCGA-DX-A3LW-01A-21R-A21T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pou5f1::Sox2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	32.4918
Lung squamous cell carcinoma_LUSC_TCGA-51-4080-01A-01R-1100-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
B-50 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.583
nuclear membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.318953
SP1	ENCODE Transcription Factor Targets	1.0	null
PCI-30	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MEL-HO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.832877
CEBPG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.1707
salivarygland	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	2.09859
sleep disorder	DISEASES Experimental Gene-Disease Association Evidence Scores	1.0	0.126165
signaling receptor activity	GO Molecular Function Annotations 2015	1.0	null
HCC2302	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.70131
female reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051795
Mixed glioma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.365
amygdaloid complex_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.45237
ACHN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.82614
HLF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.342
REC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.47351
FOXP4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.6599
REC1	CCLE Cell Line Gene CNV Profiles	1.0	1.84764
cerebellar cortex_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.859161
salivary gland	GTEx Tissue Gene Expression Profiles	-1.0	-0.890662
TCF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.8766
Skin Cutaneous Melanoma_SKCM_TCGA-EB-A4IS-01A-21R-A266-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
inferolateral temporal cortex (area TEv, area 20)_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.06348
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4988-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BSX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.4422
EPLC-272H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.833891
TGIF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.0302
orbital frontal cortex_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.27544
PROX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.5984
FOXP3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1168
POU6F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.6775
NCIH1105	CCLE Cell Line Gene CNV Profiles	-1.0	-1.93462
BGC823	CCLE Cell Line Gene CNV Profiles	1.0	1.44739
PANC0327	CCLE Cell Line Gene CNV Profiles	1.0	1.89038
Hmx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	37.6379
olfactory receptor activity	GO Molecular Function Annotations 2023	1.0	null
H3K27me3_mammary epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
chromosome, centromeric region	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.474018
A375	COSMIC Cell Line Gene Mutation Profiles	1.0	null
RPMI-7951	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.36977
SETDB1	ENCODE Transcription Factor Targets	1.0	null
BFTC909	DepMap CRISPR Gene Dependency	1.0	2.08506
PHOX2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	69.8259
cellular_component	GO Cellular Component Annotations 2015	1.0	null
KMS11	CCLE Cell Line Gene CNV Profiles	1.0	2.53753
NR3C1	JASPAR Predicted Transcription Factor Targets	1.0	null
NCIH2170	CCLE Cell Line Gene CNV Profiles	-1.0	-1.37132
ZNF384	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	195.002
primary visual cortex (striate cortex, area V1/17)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.0335
ONECUT1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	50.851
DB	DepMap CRISPR Gene Dependency	1.0	3.07428
SK-BR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07956
dorsolateral prefrontal cortex_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.20914
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.40989
BT-549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.44143
Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5888-01A-11R-1592-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lhx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.8767
chromosomal part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.357086
EZH2	ENCODE Transcription Factor Targets	1.0	null
hippocampus (hippocampal formation)_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.14676
HGC-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.978142
FLI1::DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.9948
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4998-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCIH2052	DepMap CRISPR Gene Dependency	1.0	3.40505
Pax7	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	46.0499
MOLM14	DepMap CRISPR Gene Dependency	1.0	3.1489
HS 746T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.906285
NCI-H2110	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.88132
narcolepsy	DISEASES Experimental Gene-Disease Association Evidence Scores	1.0	0.126165
plasma membrane	GO Cellular Component Annotations 2015	1.0	null
ML-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.64759
COLO-792	COSMIC Cell Line Gene Mutation Profiles	1.0	null
TRIM28_knockout_302_GSE32224	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-2.76693
GSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.624
NCI-H2135	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.913132
GATA5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.0826
Lhx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	136.45
limb	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.089532
embryonic structure	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051354
Cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.178
HSF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.0874
Outer kinetochore	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.742
PAX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.8268
Skin Cutaneous Melanoma_SKCM_TCGA-EB-A299-01A-21R-A18U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF558	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	151.418
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
anterior (rostral) cingulate (medial prefrontal) cortex_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.30483
GSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.6603
OVMANA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.98994
CW-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
trachea	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-2.14239
Organ system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.149
Liver hepatocellular carcinoma_LIHC_TCGA-BC-A10Y-01A-11R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CL-34	COSMIC Cell Line Gene Mutation Profiles	1.0	null
KARPAS-45	COSMIC Cell Line Gene Mutation Profiles	1.0	null
LMX1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	56.0122
NOTO	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.2975
inferolateral temporal cortex (area TEv, area 20)_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.02292
HCC4017	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.927641
MEF2C	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.4794
primary visual cortex (striate cortex, area V1/17)_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.12701
Liver hepatocellular carcinoma_LIHC_TCGA-ED-A7PZ-01A-11R-A33R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
tissues, cell types and enzyme sources	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.246442
G130	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.871627
MEIS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.3306
primary auditory cortex (core)_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.995469
L1236	DepMap CRISPR Gene Dependency	1.0	2.81055
VAX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.2778
NCI-H1838	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.928544
GPCR, rhodopsin-like, 7TM	InterPro Predicted Protein Domain Annotations	1.0	null
ventrolateral prefrontal cortex_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.956051
Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A719-01A-12R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TFAP2A-17053090-MCF7-human	ChEA Transcription Factor Binding Site Profiles	1.0	null
Expression and translocation of olfactory receptors	Reactome Pathways 2024	1.0	null
POU5F1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.1546
NCI-H2171	COSMIC Cell Line Gene Mutation Profiles	1.0	null
POU3F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	76.9609
HOXB6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.3689
GPCR downstream signaling	Reactome Pathways 2014	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-P3-A5QA-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
LOX-IMVI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.832877
CDX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.5101
OLIG2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.8048
253J	DepMap CRISPR Gene Dependency	1.0	2.94717
PMC3348545-NIHMS263168-supplement-3.pdf-299-RARG_RARG	Rummagene Transcription Factor Associations 2026	1.0	null
ICC3	DepMap CRISPR Gene Dependency	1.0	2.23249
TOR3A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.48108
496100419_TCx_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.00405
GATA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.2413
Hmga1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	81.8135
HCC1493	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.889326
STAT3-23295773-U87-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
G122	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13138
Intercostal muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.5
Lung adenocarcinoma_LUAD_TCGA-71-8520-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SIRT3_KO_GDS4817_416_mouse_liver	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
macromolecular complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.040638
MIXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.9004
DAN-G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07349
Ar	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.6901
NCIH2106	CCLE Cell Line Gene CNV Profiles	-1.0	-1.66662
SKM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.83867
Prostate adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.588
DLX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.6142
Primary hyperoxaluria type 1	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.01
Ventral sucker	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.925
GR-ST	COSMIC Cell Line Gene Mutation Profiles	1.0	null
JUN	ENCODE Transcription Factor Targets	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-AK-3427-01A-01R-0864-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Mecom	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	29.5926
KMS34	CCLE Cell Line Gene CNV Profiles	1.0	1.76711
SUM149PT	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.802338
ZR7530	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.07139
Plasma membrane	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
PRRX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.6889
VENTX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.1449
primary somatosensory cortex (area S1, areas 3,1,2)_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.860369
Lung squamous cell carcinoma_LUSC_TCGA-21-5782-01A-01R-1635-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
olfactory receptor activity	GO Molecular Function Annotations 2025	1.0	null
496100420_PCx_probable Alzheimer's disease_no TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.60503
RCOR1	ChEA Transcription Factor Targets	1.0	null
posterior (caudal) superior temporal cortex (area 22c)_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.10821
Ovary epithelium cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.736
Nr2f6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	44.6515
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-FF-8047-01A-11R-2213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
posterior (caudal) superior temporal cortex (area 22c)_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.840828
integral component of membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
MAFG::NFE2L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.4711
NCIH2110	CCLE Cell Line Gene CNV Profiles	1.0	1.49632
MDAMB134VI	CCLE Cell Line Gene CNV Profiles	1.0	1.65796
HUP-T3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.66945
NCIH596	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39031
HT-115	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13519
thorax	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.057335
cell periphery	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
ETV2::HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.7607
intracellular organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.04267
MSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.2423
HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.0813
ventrolateral prefrontal cortex_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.14322
REST-19997604-NEURONS-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
inferolateral temporal cortex (area TEv, area 20)_13 pcw_M_12820	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.22263
PPARD	ChEA Transcription Factor Targets	1.0	null
TFAP2A-17053090-MCF-7-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-6024-01A-11R-1686-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Gastrodermis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.879
PANC 03.27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.901341
COLO 829	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13047
PROP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	90.9
A-427	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.901341
C3A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.824162
breast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.05949
CCLFUPGI0005T	DepMap CRISPR Gene Dependency	1.0	2.5781
DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.5155
SNU-1040	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-77-8150-01A-11R-2247-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H2AFZ_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Chromosomal region	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.024
ZNF35	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.2557
posterior (caudal) superior temporal cortex (area 22c)_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.02226
Nuclear stress granule	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.047
POU3F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	72.2629
primary auditory cortex (core)_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.853942
BHY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.871627
cerebellum	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.983318
SK-N-FI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.29683
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07349
chromosomal region	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.110715
Brain Lower Grade Glioma_LGG_TCGA-WY-A85C-01A-11R-A36H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HCC515	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.29346
BHLHE23	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.3669
BFAR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36672
primary motor cortex (area M1, area 4)_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.88917
MIA PACA-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.928544
FOXK1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.571
anterior (rostral) cingulate (medial prefrontal) cortex_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.920735
NCIN87	DepMap CRISPR Gene Dependency	1.0	2.34757
striatum_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.890923
TCF7L2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7636
MGA::EVX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.4658
RDES	DepMap CRISPR Gene Dependency	1.0	2.02689
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.61813
Vitellarium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.822
EMX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.7306
primary motor cortex (area M1, area 4)_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.436
SH10TC	CCLE Cell Line Gene CNV Profiles	-1.0	-1.58713
SOX10	MotifMap Predicted Transcription Factor Targets	1.0	null
Lhx8	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.9513
HUH-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46894
NUGC-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.82614
POU4F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	90.4122
NES	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.40166
DMS 79	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.49556
striatum_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.45482
non-membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.047205
HCC33	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.49556
Childhood spinal muscular atrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.344
biological_process	GO Biological Process Annotations 2015	1.0	null
cardiovascular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054016
sensory perception of smell	GO Biological Process Annotations 2023	1.0	null
H3K27me3_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ventrolateral prefrontal cortex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.26764
FOXC1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	91.8684
MNX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.2346
plasma membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
finger	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.346298
Arid3a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	76.3333
OLIG1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.4001
primary motor cortex (area M1, area 4)_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.852335
membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.04588
VMRC-LCD	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.36451
JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.4424
sensory perception of chemical stimulus	GO Biological Process Annotations 2025	1.0	null
cell surface receptor signaling pathway	GO Biological Process Annotations 2015	1.0	null
496100418_TCx_no dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.51632
signal transducer activity	GO Molecular Function Annotations 2015	1.0	null
ATF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.092
SK-MEL-28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.841872
OE21	DepMap CRISPR Gene Dependency	1.0	2.01321
Werdnig-Hoffmann disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.391
ATF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.1217
SKLU1	CCLE Cell Line Gene CNV Profiles	1.0	1.62409
Adult spinal muscular atrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.002
Signaling by GPCR	Reactome Pathways 2014	1.0	null
CGTHW1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.75251
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-5435-01A-01R-1686-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-BB-7872-01A-11R-2232-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SNU-387	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.54028
Spleen angiosarcoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.201
Lung squamous cell carcinoma_LUSC_TCGA-66-2788-01A-01R-0980-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ventrolateral prefrontal cortex_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.22464
kidney	GTEx Tissue Gene Expression Profiles	-1.0	-0.890662
pyrazinamide_mus musculus_gpl6246_gse48027	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
MHH-ES-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13519
17823238-TableS5	GeneSigDB Published Gene Signatures	1.0	null
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.69045
CL-40	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.40989
Prostate adenocarcinoma_PRAD_TCGA-M7-A724-01A-12R-A32O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
posteroventral (inferior) parietal cortex_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.93981
intrinsic component of membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
chromosome, centromeric region	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.86
Duane retraction syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.047
BARX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.6326
SIX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.6291
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4962-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Olfactory transduction	KEGG Pathways 2026	1.0	null
A4FUK	CCLE Cell Line Gene CNV Profiles	1.0	2.38287
anterior (rostral) cingulate (medial prefrontal) cortex_13 pcw_M_12820	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.13175
STAT3-23295773-U87-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
NCIH1792	CCLE Cell Line Gene CNV Profiles	-1.0	-1.42007
bladder	GTEx Tissue Gene Expression Profiles	1.0	1.26029
ISL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.3527
primary auditory cortex (core)_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.77509
EFM-192A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.832877
ERG-20517297-VCAP-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
Dux	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	51.4594
MDN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.44617
membrane	LOCATE Predicted Protein Localization Annotations	1.0	null
primary auditory cortex (core)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.58726
b19	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.87
Lhx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	24.9695
PDX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.3009
Primary hyperoxaluria	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.002
NCIH1385	CCLE Cell Line Gene CNV Profiles	1.0	1.41502
DLX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.3362
Shox2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	44.6964
HESX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.1035
ELK1::HOXA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.2857
JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.9815
JEKO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.66945
JEKO1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.01181
GPCRs, Other(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
SOX8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.8527
PSMC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.10003
C75	DepMap CRISPR Gene Dependency	1.0	3.86425
HSF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.4373
Joubert syndrome 2	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.538
GATA3-26560356-CHIP-SEQ-TH2-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
PHOX2B-30127528-BE2C-HUMAN-BRAIN-NEUROBLASTOMA	ChEA Transcription Factor Targets 2022	1.0	null
Stinger	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.676
mastitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.16221
496100426_PCx_no dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.04754
Dlx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	40.8965
plasma membrane	LOCATE Predicted Protein Localization Annotations	1.0	null
UMRC7	DepMap CRISPR Gene Dependency	1.0	5.03765
FOXS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.3422
blood vessel	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.055723
95T1000	DepMap CRISPR Gene Dependency	1.0	6.63005
arm	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.293866
dorsolateral prefrontal cortex_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.910596
PMC7481169-277_2020_4194_MOESM7_ESM.xlsx-RUNX1_R139G-Unnamed_1_RUNX1	Rummagene Transcription Factor Associations 2026	1.0	null
whole body	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.251934
STAT3	ChEA Transcription Factor Targets	1.0	null
carcass	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.569622
LHX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.1284
Olfactory organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.164
MEL270	DepMap CRISPR Gene Dependency	1.0	4.38605
POU2F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.7191
Head and Neck squamous cell carcinoma_HNSC_TCGA-P3-A6T8-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HCC1954	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.564532
Dmrt1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	36.9615
DBP	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	52.458
NCI-H522	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2348
BCL6B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.9843
sensory perception of smell	GO Biological Process Annotations 2025	1.0	null
HOXB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.3026
HOXA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.0397
HUH1	CCLE Cell Line Gene CNV Profiles	1.0	1.44291
ZIM3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	57.4267
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-34-5232-01A-21R-1820-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SU-DHL-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.29857
Heart primordium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.906
NR2F2_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SKM1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.2972
Olfactory receptor	InterPro Predicted Protein Domain Annotations	1.0	null
primary somatosensory cortex (area S1, areas 3,1,2)_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.45232
inferolateral temporal cortex (area TEv, area 20)_10 mos_M_12977	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.11705
Pheochromocytoma and Paraganglioma_PCPG_TCGA-WB-A81G-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FOXG1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.6822
MEOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.4041
inferolateral temporal cortex (area TEv, area 20)_16 pcw_M_12879	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.2564
Roe	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.618
intracellular non-membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.047766
Head and Neck squamous cell carcinoma_HNSC_TCGA-CX-A4AQ-01A-11R-A24Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A20B-06A-11R-A18U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
STAT3	ENCODE Transcription Factor Targets	1.0	null
UMC-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.889326
SKGT2	DepMap CRISPR Gene Dependency	1.0	2.66989
POU3F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.8451
ISHIKAWAHERAKLIO02ER	DepMap CRISPR Gene Dependency	1.0	2.62751
Membrane	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
Nfat5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	35.5225
embryo	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052043
DMRTC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.0036
orbital frontal cortex_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.14322
ZNF354A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	138.0
CP66-MEL	COSMIC Cell Line Gene Mutation Profiles	1.0	null
COLO824	DepMap CRISPR Gene Dependency	1.0	4.64055
FOSL2::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.6249
JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.0929
SNU216	CCLE Cell Line Gene CNV Profiles	-1.0	-1.46926
A-Vietnam-1203_CIP048_RG3-2004(H5N1)PB1-F2del_1day-MOI-10^4_None_GSE44441	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.80245
HCC60	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.26757
HOXB3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.0352
HCC202	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01601
HPAFII	CCLE Cell Line Gene CNV Profiles	1.0	1.84855
PPARD-21283829-MYOFIBROBLAST-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051242
EN2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.6379
GATA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.4468
membrane part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
ISX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.9119
EVX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.1532
somatic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.786883
ATOH7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.8795
MEF2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.2119
UNCX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.9489
CORL105	CCLE Cell Line Gene CNV Profiles	-1.0	-2.11375
FOXP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.1671
NCI-H1648	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.955084
ESS-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HOXB2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.746
LU-65	COSMIC Cell Line Gene Mutation Profiles	1.0	null
cone-rod dystrophy 8	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.561
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2GS-06A-12R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Sox3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	27.7653
HOXD8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.6336
ERG	ChEA Transcription Factor Targets	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4691-01A-01R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7261-01A-11R-2016-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RBPJ-21746931-IB4-LCL-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
mainolfactoryepithelium.MOE.	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.2224
Sox17	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	19.8547
primary somatosensory cortex (area S1, areas 3,1,2)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.29153
sensory perception	GO Biological Process Annotations 2015	1.0	null
DMS 454	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.29346
SNU-423	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ESRRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.0282
Imago	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.636
MAFF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.6686
LN464	DepMap CRISPR Gene Dependency	1.0	2.25683
Signal Transduction	Reactome Pathways 2014	1.0	null
g-protein coupled receptor signaling pathway	GO Biological Process Annotations 2015	1.0	null
OMC-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
breast disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.991909
hand	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.345558
Arx	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	39.2609
Arid5a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	52.6408
PMC8423434-mmc7.xlsx-KLF4_HENSM-Genes_n_2172_KLF4	Rummagene Transcription Factor Associations 2026	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-P3-A6SX-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
POU1F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	59.4187
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-A641-01A-11R-A30B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CCRF-CEM	COSMIC Cell Line Gene Mutation Profiles	1.0	null
C33A	DepMap CRISPR Gene Dependency	1.0	3.83173
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4882-01A-02R-1426-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ERG-20517297-VCAP-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
FOXE1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	81.3877
Hmx2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	31.5196
HCC1806	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02903
LHX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.5701
ventrolateral prefrontal cortex_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.03809
LB2518-MEL	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Autosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.802
multicellular organismal process	GO Biological Process Annotations 2015	1.0	null
Atoh1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	34.6214
HCC70	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16853
SHOX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.6289
g-protein coupled receptor activity	GO Molecular Function Annotations 2015	1.0	null
Fascia dentata	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.979
IGR37	CCLE Cell Line Gene CNV Profiles	-1.0	-1.84021
FOXD2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	110.719
FOXB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	80.6579
Adrenocortical carcinoma_ACC_TCGA-OR-A5K9-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TBCD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.15795
cervix uteri	GTEx Tissue Gene Expression Profiles	1.0	1.32538
FOXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.3558
KP2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.54185
organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.042422
HOXA7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.4973
Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7J9-01A-12R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.404
detection of stimulus involved in sensory perception	GO Biological Process Annotations 2015	1.0	null
MSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.723
GPCRs other	WikiPathways Pathways 2024	1.0	null
mediodorsal nucleus of thalamus_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.09315
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7103-01A-21R-2016-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Juvenile spinal muscular atrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.698
fallopian tube	GTEx Tissue Gene Expression Profiles	-1.0	-0.890662
POU3F4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	49.914
detection of chemical stimulus	GO Biological Process Annotations 2015	1.0	null
anterior (rostral) cingulate (medial prefrontal) cortex_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.2331
detection of chemical stimulus involved in sensory perception of smell	GO Biological Process Annotations 2015	1.0	null
EZH2_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SU-DHL-8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13519
NFE2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.9935
embryonic stem feeder layer	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.44049
STAT3_MCF 10A_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.44235
HCC1143	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.7801
H3118	COSMIC Cell Line Gene Mutation Profiles	1.0	null
LMX1A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	95.2974
amygdaloid complex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.64293
PRRX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.7212
SETDB1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-A49A-01A-11R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A71A-01A-22R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ACHN	CCLE Cell Line Gene CNV Profiles	1.0	1.77928
FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.8203
cellular_component	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041585
Lung adenocarcinoma_LUAD_TCGA-55-7727-01A-11R-2170-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4971-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
amygdaloid complex_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.28136
chromosome, subtelomeric region	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.72
cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-A63T-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RVH421	DepMap CRISPR Gene Dependency	1.0	2.59361
Disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.311
Kidney renal clear cell carcinoma_KIRC_TCGA-A3-3363-01A-01R-0864-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7245-01A-11R-2016-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
sensory perception of smell	GO Biological Process Annotations 2015	1.0	null
SOX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.0698
RBPJ	ChEA Transcription Factor Targets	1.0	null
SHI1	DepMap CRISPR Gene Dependency	1.0	3.73608
PBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.8018
HOXD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.4505
BACH1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.0731
HNF1A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	54.4291
496100528_FWM_no dementia_no TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	17.1436
primary visual cortex (striate cortex, area V1/17)_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.33909
LOVO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13836
PMC3303130-NIHMS40463-supplement-4.xls-KamKwaMuk_AA_differences-human_geneID_TEAD1	Rummagene Transcription Factor Associations 2026	1.0	null
Lsd1/2 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.548
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5456-11A-02R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Hmx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	37.0835
T3M4	CCLE Cell Line Gene CNV Profiles	1.0	1.55658
U343	CCLE Cell Line Gene CNV Profiles	-1.0	-1.37372
NCI-H146	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18511
NCI-H1944	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26838
FOXO4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.0069
Lung adenocarcinoma_LUAD_TCGA-49-4505-01A-01R-1206-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
detection of chemical stimulus involved in sensory perception	GO Biological Process Annotations 2015	1.0	null
NFATC4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.838
Prostate adenocarcinoma_PRAD_TCGA-HC-A6AN-01A-11R-A30B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HT-1376	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NR2F2	ENCODE Transcription Factor Targets	1.0	null
amygdaloid complex_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	3.4231
POU2F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.2621
SAT	DepMap CRISPR Gene Dependency	1.0	2.33556
single-organism process	GO Biological Process Annotations 2015	1.0	null
SKBR3	DepMap CRISPR Gene Dependency	1.0	3.76461
EJM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07349
NCI-H1437	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46894
SP1_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
OAW28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02903
MCC13	COSMIC Cell Line Gene Mutation Profiles	1.0	null
TGIF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.5363
NUDHL1	CCLE Cell Line Gene CNV Profiles	1.0	1.41108
VMRCLCD	CCLE Cell Line Gene CNV Profiles	1.0	2.20998
thoracic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.990644
POU5F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.0044
Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7JS-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H920	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09542
forelimb	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.098424
detection of stimulus	GO Biological Process Annotations 2015	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4821-01A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
integral component of membrane	GO Cellular Component Annotations 2015	1.0	null
temporal neocortex_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.74515
VSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.5694
chromatin	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.088159
Brain Lower Grade Glioma_LGG_TCGA-HW-8319-01A-11R-2404-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
LHX9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.4613
FOSL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.6158
POLR2A_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
system process	GO Biological Process Annotations 2015	1.0	null
CAKI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.833891
KG1	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
lung	GTEx Tissue Gene Expression Profiles	-1.0	-0.890662
MKN7	CCLE Cell Line Gene CNV Profiles	-1.0	-1.70665
NCI-H1693	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.54028
hippocampus (hippocampal formation)_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.12784
NEUROG1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.5825
Miracidium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.599
Msx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	44.8399
OCI-LY-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13519
NZOV9	DepMap CRISPR Gene Dependency	1.0	2.8824
ZNF667	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.4411
olfactory receptor activity	GO Molecular Function Annotations 2015	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-5359-01A-01R-1436-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MDAMB134VI	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.720799
microvessel	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.416195
MDAMB436	CCLE Cell Line Gene CNV Profiles	-1.0	-1.61602
organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.043439
Retinal macular dystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.068
MDAMB175VII	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.853928
PPARD-21283829-MYOFIBROBLAST-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
GMS10	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36253
DU-4475	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A3B5-01A-11R-A20F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
OLIG3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.9063
Head and Neck squamous cell carcinoma_HNSC_TCGA-MT-A7BN-01A-12R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ETS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.08153
HOS	COSMIC Cell Line Gene Mutation Profiles	1.0	null
mammary gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.370121
EMX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.8152
Acute Myeloid Leukemia_LAML_TCGA-AB-2849-03A-01T-0734-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MCF12A	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.15975
signal transduction	GO Biological Process Annotations 2015	1.0	null
Alx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	31.279
preoptic	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.08226
TC106	DepMap CRISPR Gene Dependency	1.0	2.80838
testis	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.24815
SKNEP1	DepMap CRISPR Gene Dependency	1.0	2.19236
Sox1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	44.2979
Achromatopsia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.236
cortex	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.846816
NCI-H2170	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.871627
hippocampus (hippocampal formation)_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.03766
amygdala	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.33727
JVM3	CCLE Cell Line Gene CNV Profiles	1.0	1.46472
Foxj3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.0632
Kidney renal papillary cell carcinoma_KIRP_TCGA-MH-A854-01A-11R-A355-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
disease of mental health	DISEASES Experimental Gene-Disease Association Evidence Scores	1.0	0.126165
single-multicellular organism process	GO Biological Process Annotations 2015	1.0	null
disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.039811
KNS81	DepMap CRISPR Gene Dependency	1.0	3.13585
TLX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.5056
T84	CCLE Cell Line Gene CNV Profiles	1.0	1.32825
Dlx2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.1253
non-syndromic X-linked intellectual disability 63	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.739
primary somatosensory cortex (area S1, areas 3,1,2)_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.24127
dexamethasone_homo sapiens_gpl6244_gse20963	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-BB-A5HY-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SNU-216	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.840991
Hoxd13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	56.8772
537 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.8808
BACH2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.0564
DMS79	CCLE Cell Line Gene CNV Profiles	-1.0	-1.88581
nuclear part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.042001
TCF7L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	52.6367
RCOR1-19997604-NEURONS-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
inferolateral temporal cortex (area TEv, area 20)_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.27227
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A51N-06A-11R-A266-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
mediodorsal nucleus of thalamus_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.56744
Histiocytic and dendritic cell cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.044
SUM225CWN	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.04461
SW 620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04408
Histiocytic sarcoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.148
RERFLCAD2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35161
NFATC3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.533
ESX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.6354
POU2F1::SOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	63.8316
EZH2_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
sensory perception of chemical stimulus	GO Biological Process Annotations 2023	1.0	null
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
Dlx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	41.6841
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-4735-01A-01R-1436-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Charcot-Marie-Tooth disease type 4D	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.035
Cellular anatomical entity	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
cell part	GO Cellular Component Annotations 2015	1.0	null
Rectum adenocarcinoma_READ_TCGA-EI-6885-01A-11R-1928-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-21-1076-01A-01R-0692-07,TCGA-21-1076-01A-02R-0692-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NKX6-1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.0457
Pericentric heterochromatin	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.781
MDA-MB-231	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.871627
NFYA_01_288	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.58572
Color blindness	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.158
parietal neocortex_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.876738
Liver hepatocellular carcinoma_LIHC_TCGA-CC-A8HT-01A-11R-A36F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-IQ-7632-01A-11R-2081-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Olfactory Signaling Pathway	Reactome Pathways 2014	1.0	null
Lung adenocarcinoma_LUAD_TCGA-05-4389-01A-01R-1206-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
posterior (caudal) superior temporal cortex (area 22c)_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.18447
ZNF766	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.1249
RV16_0Hour-B2B_None_GSE28904	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.46543
CENP-A recruiting complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.695
SRY	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.2143
HCC2185	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.96887
HCC38	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.602664
NCI-H187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.978142
chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.32195
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7097-01A-11R-2016-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K4me1_H9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
PSN1	DepMap CRISPR Gene Dependency	1.0	6.73689
ventrolateral prefrontal cortex_10 mos_M_12977	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.36917
HMBOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.384
NCI-H889	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.58592
SLC18A3_KD_GDS4325_618_mouse_Heart	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
primary motor cortex (area M1, area 4)_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.958384
Brain Lower Grade Glioma_LGG_TCGA-FG-A60L-01A-12R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Olfactory Signaling Pathway	Reactome Pathways 2024	1.0	null
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.833891
FOXJ2::ELF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.5925
animal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.250953
HOXB5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.8645
Disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.173
HIF1A_01_348	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	2.27771
cd8.Tcell	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.15344
ZNF582	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.2901
ZNF652	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.0995
Alx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	48.7596
496100472_PCx_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.39903
GBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.6785
HPAF-II	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.03277
UPCISCC029A	DepMap CRISPR Gene Dependency	1.0	3.00336
SK-MES-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.928544
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GS-A9TV-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PKNOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.7671
Thoracic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.002
BARX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.8691
PMC5497057-ncomms15921-s2.xlsx-AA_PCa_vs_AA_NP-Unnamed_2_TEAD1	Rummagene Transcription Factor Associations 2026	1.0	null
trunk	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053093
LHX5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.6894
striatum_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.831102
cerebellar cortex_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.14017
regulation of biological process	GO Biological Process Annotations 2015	1.0	null
p92	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.857
HOXB7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.0718
UCSD-242L	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.901341
Comedo carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.095
H3K4me2_H1-hESC_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.050588
NEUROG2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.6704
endocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.05089
A704	CCLE Cell Line Gene CNV Profiles	1.0	1.49733
PMC8046804-41467_2021_22478_MOESM11_ESM.xlsx-Del_AA-TCGA-Unnamed_42_TEAD1	Rummagene Transcription Factor Associations 2026	1.0	null
RKN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.28191
cell part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041937
Lung adenocarcinoma_LUAD_TCGA-55-8507-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RUNX1-22897851-JUKARTE6-1-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
VAX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.0518
Bladder Urothelial Carcinoma_BLCA_TCGA-GD-A6C6-01A-21R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Sensory Perception	Reactome Pathways 2024	1.0	null
NCI-H2106	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.61123
Sox7	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	20.8955
KDM5A	ENCODE Transcription Factor Targets	1.0	null
SKNFI	CCLE Cell Line Gene CNV Profiles	1.0	1.35247
GP5D	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SOX18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.7063
KP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.41103
SPI1-20517297-HL60-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
YAE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.5319
POU4F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	59.1589
regulation of cellular process	GO Biological Process Annotations 2015	1.0	null
primary motor cortex (area M1, area 4)_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.28595
striatum_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.18092
H3K27me3_Mobilized CD34 Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
JAK2_activemutant_178_GSE44961	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.62003
transmembrane signaling receptor activity	GO Molecular Function Annotations 2015	1.0	null
GTL-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.901341
Skin Cutaneous Melanoma_SKCM_TCGA-ER-A42K-06A-11R-A24X-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
heterochromatin	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.523476
non-syndromic intellectual disability	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.049
ZNF410	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.5687
medial ganglionic eminence_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.920735
Kidney renal papillary cell carcinoma_KIRP_TCGA-AL-3471-01A-02R-1351-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K4me1_H1-hESC_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Arid3b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	74.4089
LU-134-A	COSMIC Cell Line Gene Mutation Profiles	1.0	null
JDP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.3419
embryonic stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.310421
SPI1-20517297-HL60-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
ALX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.0725
COLO-783	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.927641
posteroventral (inferior) parietal cortex_19 pcw_F_12885	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.11584
ZNF680	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.3732
PMC7592539-12885_2020_7456_MOESM4_ESM.xlsx-Sup_TableS3_LMS_del_genes_conf-12q13_11_TP63	Rummagene Transcription Factor Associations 2026	1.0	null
SK-N-DZ	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.940497
FOXD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	126.238
Refractive error	GWAS Catalog SNP-Phenotype Associations 2025	1.0	10.0
HUPT3	CCLE Cell Line Gene CNV Profiles	-1.0	-2.39015
posterior (caudal) superior temporal cortex (area 22c)_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.876738
Intermediate spinal muscular atrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.672
HCC1011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08872
disease	DISEASES Experimental Gene-Disease Association Evidence Scores	1.0	0.126165
A4/FUK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19312
Schmidt-Lanterman incisure	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.709
DMS454	CCLE Cell Line Gene CNV Profiles	1.0	1.46808
JUN_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SIX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.0723
GBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.4482
HOXC8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.3661
ventrolateral prefrontal cortex_37 yrs_M_12303	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.987437
MAVER1	DepMap CRISPR Gene Dependency	1.0	2.33472
IGR39	CCLE Cell Line Gene CNV Profiles	-1.0	-1.51364
LY2	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.644775
Lung squamous cell carcinoma_LUSC_TCGA-51-4081-01A-01R-1100-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HOXC10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.183
FOXC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	102.311
NCI-H226	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.988661
TT2609C02	DepMap CRISPR Gene Dependency	1.0	2.88125
CDX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	52.0328
E2F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7373
FOSL2::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.6678
FOXF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.0606
intracellular organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.043729
FOXL1	JASPAR Predicted Transcription Factor Targets	1.0	null
HOXA5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.5942
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2MH-06A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostatic urethra	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.677
OAW42	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07207
dorsolateral prefrontal cortex_10 mos_M_12977	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.19651
PMC12619835-41467_2025_66007_MOESM8_ESM.xlsx-Basal_KLF5_peaks-Gene_Name_KLF5	Rummagene Transcription Factor Associations 2026	1.0	null
NFIL3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.8374
PMC12619835-41467_2025_66007_MOESM13_ESM.xlsx-Sheet1-Basal_like_KLF5_peaks_KLF5	Rummagene Transcription Factor Associations 2026	1.0	null
RBPJ-21746931-IB4-LCL-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
HOXA6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.6637
HCC1569	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26528
ventrolateral prefrontal cortex_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.39293
Skin Cutaneous Melanoma_SKCM_TCGA-DA-A1I8-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MKN-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26528
KMS-34	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.80105
Leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.025
Inner kinetochore	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.972
JJN-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.928544
SNU-601	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.54028