association	dataset	threshold value	standardized value
A-Vietnam-1203_CIP048_RG4-2004(H5N1)PB2-627E_7day-MOI-10^4_None_GSE43301	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.54676
PANC 03.27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.889727
NCI-H2170	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.855947
AN3-CA	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HCC60	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.2692
GSE211474,GSE212779_0_v_1_phf8_human	RummaGEO Gene Perturbation Signatures	-1.0	null
U343	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35312
ChIP_SETDB1_19884257	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
NCIH1355	CCLE Cell Line Gene CNV Profiles	1.0	1.82234
NCI-H1770	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Nanog	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	16.1841
Rhox11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	30.6894
GSE157383_3_v_2_abemaciclib_human	RummaGEO Drug Perturbation Signatures	1.0	null
NR3C2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.1578
cellular_component	GO Cellular Component Annotations 2015	1.0	null
HOXA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.5384
rectum	HPA Tissue Protein Expression Profiles	1.0	1.0066
OVMANA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.975175
GSE121824,GSE121826_0_v_8_scaf8_human	RummaGEO Gene Perturbation Signatures	1.0	null
NCI-H1734	COSMIC Cell Line Gene Mutation Profiles	1.0	null
RKN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23908
ACHN	CCLE Cell Line Gene CNV Profiles	1.0	1.69447
CDX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.3279
Pou5f1::Sox2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	57.2517
EGFR_druginhibition_83_GSE27640	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	2.11164
Foxj3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	87.9904
COLO-783	COSMIC Cell Line Gene Mutation Profiles	1.0	null
detection of chemical stimulus involved in sensory perception	GO Biological Process Annotations 2015	1.0	null
COLO 829	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09968
GSE185519_4_v_7_gilteritinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
DMS79	CCLE Cell Line Gene CNV Profiles	-1.0	-1.82796
GSE158834_11_v_5_palmitic acid_human	RummaGEO Drug Perturbation Signatures	1.0	null
PAX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.3581
COLO 699	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.889727
Pheochromocytoma and Paraganglioma_PCPG_TCGA-SR-A6MU-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Sox5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.8226
Expression and translocation of olfactory receptors	Reactome Pathways 2024	1.0	null
Elf5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	35.5469
JEKO1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.93537
Arid3b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	41.4185
HCC1954	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05255
POU3F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	52.2198
Pheochromocytoma and Paraganglioma_PCPG_TCGA-SP-A6QG-01A-12R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
A-Vietnam-1203_CIP048_RG4-2004(H5N1)NS1trunc124_4day-MOI-10^3_None_GSE44445	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.93756
SU-DHL-8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11048
SOX18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.488
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22383
ZNF135	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89956
SUM149PT	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.695752
HPAF-II	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.97001
G130	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.855947
Lef1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	41.3571
Nr5a1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	44.6074
SARS-CoV MA15_Day4-PFU-10^4_None_GSE50000	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-2.02994
OAW28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00512
Pheochromocytoma and Paraganglioma_PCPG_TCGA-W2-A7H5-01B-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H2106	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.52832
HOXA10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.2686
Foxl2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	45.68
POU2F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.4726
HUP-T3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.57582
Umbilical vein endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.023
LHX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.6556
SOX21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.567
Dmrt1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.2243
MEF2D	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.5095
NR1I2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.5278
membrane part	GO Cellular Component Annotations 2015	1.0	null
POU5F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.5532
Stat5a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.3463
HUPT3	CCLE Cell Line Gene CNV Profiles	-1.0	-2.23079
SKN-3	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Olfactory receptor	InterPro Predicted Protein Domain Annotations	1.0	null
NCIH660	CCLE Cell Line Gene CNV Profiles	1.0	1.90093
parathyroid gland	HPA Tissue Protein Expression Profiles	1.0	1.0066
Sarcoma_SARC_TCGA-X6-A7WC-01A-12R-A355-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MIXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.7883
Head and Neck squamous cell carcinoma_HNSC_TCGA-MT-A7BN-01A-12R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Testis	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
SK-BR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05255
PMC8379183-41467_2021_25326_MOESM9_ESM.xlsx-genes_with_only_SALL4_peaks-Protein-coding_genes_that_show_only_CUT_RUN_peaks_with_2_SALL4_antibodies_and_no_other_antibodies_SALL4	Rummagene Transcription Factor Associations 2026	1.0	null
HCC2935	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.8268
Internal male genital organ	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
ONECUT3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	91.3792
JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.3631
PHOX2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	118.111
Head and Neck squamous cell carcinoma_HNSC_TCGA-IQ-A61O-01A-11R-A30B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NY	COSMIC Cell Line Gene Mutation Profiles	1.0	null
EJM	DepMap CRISPR Gene Dependency	1.0	2.25499
Sox1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	72.9695
TLX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.6578
NCI-H2110	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.75206
FOXA1-21572438-LNCAP-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
ESX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.6451
PROP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	85.9847
Sox7	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	32.8832
BT549	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.798406
Nfat5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	40.3258
olfactory receptor activity	GO Molecular Function Annotations 2025	1.0	null
PAX2	JASPAR Predicted Transcription Factor Targets	1.0	null
FOXP3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.0534
ONS-76	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H146	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1545
USP2_KO_GDS5079_25_mouse_kidney	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
Hmx2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	56.4757
GSE139455_7_v_6_stat3_human	RummaGEO Gene Perturbation Signatures	1.0	null
ZNF35	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.9921
SKLU1	CCLE Cell Line Gene CNV Profiles	1.0	1.56134
HS-SULTAN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11333
ZNF24	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.5711
Nobox	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	28.6579
SW948	COSMIC Cell Line Gene Mutation Profiles	1.0	null
DUX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.539
NEUROG1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.877
POU3F2-20337985-501MEL-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
LMX1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.8604
HCC515	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.24785
Stat2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	300.076
membrane part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
SK-N-DZ	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.927825
Sensory Perception	Reactome Pathways 2024	1.0	null
EMX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.4139
496100416_FWM_dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.74774
HOXB4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.5899
NCIH2110	CCLE Cell Line Gene CNV Profiles	1.0	1.45058
SK-MES-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.910079
small intestine	HPA Tissue Protein Expression Profiles	1.0	1.0066
CAL-120	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0673
GSE202434,GSE202438_13_v_1_talazoparib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
EZH2_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_mononuclear cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Adrenocortical carcinoma_ACC_TCGA-OR-A5JY-01A-31R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HEC-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4995-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
UCSD-242L	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.889727
GSE158834_1_v_5_palmitic acid_human	RummaGEO Drug Perturbation Signatures	1.0	null
DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.0794
PAX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.1003
SRY	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.7857
FOXE1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	73.5466
Foxf1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	15.8641
HPAFII	CCLE Cell Line Gene CNV Profiles	1.0	1.75215
SARS-CoV MA15_Day1-PFU-10^4_None_GSE50000	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.45652
MKN-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22383
PMC7244323-elife-55325-supp3.xlsx-Noordermeer_TP53-KO-Gene_TP53	Rummagene Transcription Factor Associations 2026	1.0	null
intracellular non-membrane-bounded organelle	GO Cellular Component Annotations 2023	1.0	null
Sox17	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	31.5512
Bladder Urothelial Carcinoma_BLCA_TCGA-CU-A3KJ-01A-11R-A21D-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCIH1573	DepMap CRISPR Gene Dependency	1.0	2.15505
ZNF616	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.3066
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4768-01A-01R-1289-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prdm15	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	27.57
ISL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.6839
HCC1569	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.805873
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
BACH2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	64.7834
MDAMB361	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.80018
Head and Neck squamous cell carcinoma_HNSC_TCGA-DQ-7591-01A-11R-2081-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
VENTX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.8032
Mecom	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	132.074
Dlx2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.039
Lung adenocarcinoma_LUAD_TCGA-55-6972-01A-11R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KYSE-140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1545
Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-6228-01A-11R-1915-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HNF1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.7302
Lung adenocarcinoma_LUAD_TCGA-55-A493-01A-11R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Male reproductive gland	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
496100472_PCx_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.32084
Prostate adenocarcinoma_PRAD_TCGA-HC-7745-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SNU16	DepMap CRISPR Gene Dependency	1.0	2.00428
VMRCLCD	CCLE Cell Line Gene CNV Profiles	1.0	2.05781
GCT	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HCC70	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32159
Whole body	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
MIA PACA-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.910079
PBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.2778
MCF12A	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.31835
regulation of biological process	GO Biological Process Annotations 2015	1.0	null
HCC1143	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.66237
GSE185519_3_v_7_gilteritinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
MCF10F	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.996111
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GS-A9TV-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DMRTC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.4847
Arid5a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	22.5138
SOX15	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.182
Signal Transduction	Reactome Pathways 2014	1.0	null
GSE185519_1_v_2_gilteritinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
JJN-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.910079
Dlx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.2631
HOXD4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.4638
Isl1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	16.7128
SLC25A11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.67744
Bcl11b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	30.8188
Tbx6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.4333
UACC893	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.47188
H3K27me3_Adult Liver	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
A-427	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.889727
LHX9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.7676
PFKFB3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.43935
A4/FUK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16147
Ebolavirus(ZEBOV)_7day_PBMCs_rNAPc2treated_21987740_GSE24943	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-0.106151
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5000-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BHLHE23	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.3142
DLX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.7735
OLIG3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.9063
MZ7-MEL	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NFIL3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.9356
PMC8046804-41467_2021_22478_MOESM11_ESM.xlsx-Del_AA-TCGA-Unnamed_42_TEAD1	Rummagene Transcription Factor Associations 2026	1.0	null
PRRX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.1822
EN2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.3927
Prostate adenocarcinoma_PRAD_TCGA-QU-A6IO-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TDRD6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.9205
Adrenocortical carcinoma_ACC_TCGA-OR-A5K9-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
lipid droplet	GO Cellular Component Annotations 2025	1.0	null
CGTHW1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.70855
HCC2302	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.57402
SU-DHL-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2522
Uterine Carcinosarcoma_UCS_TCGA-N5-A59E-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FOXD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	81.7404
LHX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.0623
IGR-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
POU2F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.3232
ICC12	DepMap CRISPR Gene Dependency	1.0	2.22426
Msgn1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.9852
MKN7	CCLE Cell Line Gene CNV Profiles	-1.0	-1.66646
HCC1493	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.877951
DLX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.8998
JEKO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.57582
KYO1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.02764
NCIH2106	CCLE Cell Line Gene CNV Profiles	-1.0	-1.62856
MDA-MB-231	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.855947
NR1I3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.9622
GSE148262,GSE150691_3_v_2_hdlbp_human	RummaGEO Gene Perturbation Signatures	1.0	null
KKU100	DepMap CRISPR Gene Dependency	1.0	2.4322
molecular_function	GO Molecular Function Annotations 2015	1.0	null
Arid3a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	63.6667
SUIT2	DepMap CRISPR Gene Dependency	1.0	2.34064
DU4475	DepMap CRISPR Gene Dependency	1.0	2.46446
BCDIN3D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.19887
HCT-15	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SNU-216	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.8268
Dlx5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	29.4211
EVX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.3581
FOXC1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	52.6799
POU3F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.2461
POLR2A_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Extravillous trophoblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.842
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
stomach	GTEx Tissue Gene Expression Profiles	1.0	0.848857
DMS 454	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.24785
NCI-H1838	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.910079
MEIS2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.925
ZR751	CCLE Cell Line Gene CNV Profiles	1.0	2.21165
KYSE-180	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HCC1569	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22383
Brain Lower Grade Glioma_LGG_TCGA-S9-A6TV-01A-12R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF558	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	125.169
SPIB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.4412
NCI-H596	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09968
plasma membrane	GO Cellular Component Annotations 2015	1.0	null
PSN1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
RCOR1-19997604-NEURONS-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
MEIS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.707
EM2	DepMap CRISPR Gene Dependency	1.0	2.07072
KP-3	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Endocrine gland	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
PANC0327	CCLE Cell Line Gene CNV Profiles	1.0	1.7856
POU3F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.5713
SETDB1-19884257-MESC-mouse	ChEA Transcription Factor Binding Site Profiles	1.0	null
GMS10	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34211
Adrenocortical carcinoma_ACC_TCGA-OR-A5LE-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Foxj2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	75.4218
Uterine Carcinosarcoma_UCS_TCGA-N8-A4PI-01A-21R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DMRTA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.1362
molecular transducer activity	GO Molecular Function Annotations 2015	1.0	null
CORL105	CCLE Cell Line Gene CNV Profiles	-1.0	-2.02083
G122	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10053
SOX2-19829295-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
REST_01_337	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.59595
Nephrogenic diabetes insipidus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.122
biological regulation	GO Biological Process Annotations 2015	1.0	null
regulation of cellular process	GO Biological Process Annotations 2015	1.0	null
SK-MEL-28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.827635
Lhx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	36.8
ATF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.8228
HOXA7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.0532
BCL6B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.4224
NCI-H522	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.1962
FOXB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.4717
NKX6-1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.665
detection of stimulus	GO Biological Process Annotations 2015	1.0	null
SOX9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.3816
FOXC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	52.3125
Hoxa11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.7426
SNU213	CCLE Cell Line Gene CNV Profiles	-1.0	-1.38113
Contrast sensitivity	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.530103
SH10TC	CCLE Cell Line Gene CNV Profiles	-1.0	-1.57543
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04689
MEF2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.0415
NEUROG2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.6678
cell periphery	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
NCI-H1693	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.46978
Msx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	29.1126
HT-115	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11048
PMC5817105-thnov08p0972s2.xls-SIX3-GeneName_SIX3	Rummagene Transcription Factor Associations 2026	1.0	null
ML-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.5291
H3K27me3_CD4+ CD25- CD45RO+ Memory Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
POU3F2	ChEA Transcription Factor Targets	1.0	null
biological_process	GO Biological Process Annotations 2015	1.0	null
NCI-H2135	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.901276
GATA1::TAL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.357
Tcf21	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	21.8838
GPCR, rhodopsin-like, 7TM	InterPro Predicted Protein Domain Annotations	1.0	null
VSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.734
Refractive error	GWAS Catalog SNP-Phenotype Associations 2025	1.0	10.0
KMS34	DepMap CRISPR Gene Dependency	1.0	2.347
olfactory receptor activity	GO Molecular Function Annotations 2023	1.0	null
YWHAB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78938
EZH2_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H889	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48022
HOXB7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.7818
HCC1011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.06824
POU4F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.0972
HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	52.155
POU5F1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.6533
POU6F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.6098
Congenital hypothyroidism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.023
PMC7592539-12885_2020_7456_MOESM4_ESM.xlsx-Sup_TableS3_LMS_del_genes_conf-12q13_11_TP63	Rummagene Transcription Factor Associations 2026	1.0	null
FOXC1	JASPAR Predicted Transcription Factor Targets	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5187-01A-01R-1426-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CDX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	53.6936
MDST8	DepMap CRISPR Gene Dependency	1.0	2.27646
496100421_PCx_probable Alzheimer's disease_TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.41647
496100604_HIP_no dementia_TBI_95-99_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	14.8918
A-Vietnam-1203_CIP048_RG3-2004(H5N1)PB1-F2del_2day-MOI-10^4_None_GSE44441	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.90545
POU4F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	50.8287
SLC15A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.22544
GSE186647,GSE217288_2_v_4_hnrnpc_human	RummaGEO Gene Perturbation Signatures	-1.0	null
SKM1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.17248
SK-N-FI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.25072
Brain Lower Grade Glioma_LGG_TCGA-DU-7304-01A-12R-2090-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DAN-G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04689
GSE158834_11_v_5_palm_human	RummaGEO Gene Perturbation Signatures	1.0	null
GSE242290_1_v_2_glutathione_human	RummaGEO Drug Perturbation Signatures	1.0	null
signal transducer activity	GO Molecular Function Annotations 2015	1.0	null
DMS454	CCLE Cell Line Gene CNV Profiles	1.0	1.42473
95T1000	DepMap CRISPR Gene Dependency	1.0	2.63474
CDX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.2977
HOXA5	JASPAR Predicted Transcription Factor Targets	1.0	null
stomach	HPA Tissue Protein Expression Profiles	1.0	1.0066
intracellular membraneless organelle	GO Cellular Component Annotations 2025	1.0	null
plasma membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
496100367_FWM_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.31423
HCC1500	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.738993
NR3C1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.2128
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
Hypothyroidism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.071
Gland	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
A4FUK	CCLE Cell Line Gene CNV Profiles	1.0	2.32727
RAX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.7803
RERFLCAD2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33123
EVX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.6747
KP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.35691
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.963962
H2AFZ_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Npas4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	15.8059
POU4F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	57.3078
IGR39	CCLE Cell Line Gene CNV Profiles	-1.0	-1.48597
ZNF547	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.8467
GSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.269
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-A6V6-01A-12R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HCC1806	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00512
Zic1::Zic2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	28.4272
POU1F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	52.806
SNU-175	COSMIC Cell Line Gene Mutation Profiles	1.0	null
JL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.98454
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4818-01A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.1677
NOTO	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.9492
icSARA deltaORF6_48Hour_23365422_GSE33267	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.18796
ARGFX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.3756
PMC8379183-41467_2021_25326_MOESM9_ESM.xlsx-SALL4_unique_peaks-Unnamed_15_SALL4	Rummagene Transcription Factor Associations 2026	1.0	null
icSARS-Cov_Day4_None_GSE50000	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.93806
SW 620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02686
SNU-81	COSMIC Cell Line Gene Mutation Profiles	1.0	null
H3K27me3_CD14-positive monocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TUBA1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.92201
PITX2_01_54	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.67525
KMS11	CCLE Cell Line Gene CNV Profiles	1.0	2.53093
SLC41A3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.57976
Spi1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	62.1155
JM1	CCLE Cell Line Gene CNV Profiles	1.0	3.21025
CTCF_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SNU449	DepMap CRISPR Gene Dependency	1.0	2.56646
MSANTD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.7318
SW48	DepMap CRISPR Gene Dependency	1.0	2.24644
RPMI-7951	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.33378
GSE115542_5_v_1_digoxin_human	RummaGEO Drug Perturbation Signatures	1.0	null
SIX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1467
Lung squamous cell carcinoma_LUSC_TCGA-37-A5EN-01A-21R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
olfactory receptor activity	GO Molecular Function Annotations 2015	1.0	null
BGC823	CCLE Cell Line Gene CNV Profiles	1.0	1.40515
HGC-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.963962
GIMEN	DepMap CRISPR Gene Dependency	1.0	2.15152
ONECUT1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	52.3287
HOXD8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1659
HOXD9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.3916
Ebf2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	31.9907
Hoxd13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	35.2863
MEOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.9473
ZNF652	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.0213
FOXH1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.3936
KG1	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
BMPR1A_knockout_222_GSE48092	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	1.10967
Lung squamous cell carcinoma_LUSC_TCGA-21-5782-01A-01R-1635-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
UMC-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.877951
SW1573	DepMap CRISPR Gene Dependency	1.0	2.19278
HCC3153	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.986364
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4882-01A-02R-1426-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-6992-01A-11R-1915-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ERF::HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.2181
MDAMB157	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.656774
Atrial heart septal defect 9	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.354
HOXB3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.2768
IRF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.9802
537 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.73823
pre-eclampsia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.023
IGR37	CCLE Cell Line Gene CNV Profiles	-1.0	-1.78834
g-protein coupled receptor activity	GO Molecular Function Annotations 2015	1.0	null
LHX5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.9834
YMB1	CCLE Cell Line Gene CNV Profiles	1.0	2.05802
NCIH596	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36923
Male reproductive system	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
POU3F2-20337985-501MEL-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Phenylketonuria	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.007
LNCAP-CLONE-FGC	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Reproductive system	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
G protein-coupled receptor, rhodopsin-like	InterPro Predicted Protein Domain Annotations	1.0	null
NCI-H1355	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02686
Dux	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	29.0271
Gonad	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
RVH421	DepMap CRISPR Gene Dependency	1.0	2.55246
Signaling by GPCR	Reactome Pathways 2014	1.0	null
tissues, cell types and enzyme sources	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
POU3F4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.5305
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A29C-06A-21R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HOXA6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.3228
Zfp335	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	16.9881
EJM	CCLE Cell Line Gene CNV Profiles	-1.0	-1.50308
OCI-LY-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11048
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4325-01A-02R-1289-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZR-75-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.77357
496100418_TCx_no dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.85709
Hmx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	30.9396
SUP-T1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
KYSE-30	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Olfactory transduction	KEGG Pathways 2026	1.0	null
POLR2A	ENCODE Transcription Factor Targets	1.0	null
detection of stimulus involved in sensory perception	GO Biological Process Annotations 2015	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-G7-6797-01A-11R-1965-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PHF8-20622854-HELA-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Ptf1a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	53.1167
PMC8814143-41419_2022_4530_MOESM12_ESM.xlsx-up_ZNF32_vs_Vector-Unnamed_1_ZNF32	Rummagene Transcription Factor Associations 2026	1.0	null
EJM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04689
ZNF8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	98.7487
MDAMB134VI	CCLE Cell Line Gene CNV Profiles	1.0	1.58996
ACSBG2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.79752
KP2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.51245
NANOG-19829295-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
SHOX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.0022
Runx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.215
Sarcoma_SARC_TCGA-DX-A3LY-01B-11R-A27Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Zbtb2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.42
EZH2	ENCODE Transcription Factor Targets	1.0	null
NCI-H226	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.973959
NCOR-22424771-293T-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Hnf1a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	41.3259
integral component of membrane	GO Cellular Component Annotations 2015	1.0	null
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.5333
Female reproductive gland	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
HOXB5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.5504
cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
MDAMB436	CCLE Cell Line Gene CNV Profiles	-1.0	-1.58095
Female reproductive system	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
receptor activity	GO Molecular Function Annotations 2015	1.0	null
NCI-H187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.963962
PHOX2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.0435
REST	ChEA Transcription Factor Targets	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-IA-A83V-01A-11R-A355-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lipid droplet	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	4.0
ISX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.7603
THOC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.11415
YMB-1-E	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.77534
ZNF136	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.6795
non-syndromic intellectual disability	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.273
H3K27me3_cardiac mesoderm_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TGBC11TKB	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Olfactory Signaling Pathway	Reactome Pathways 2024	1.0	null
Nr5a2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.751
KMS34	CCLE Cell Line Gene CNV Profiles	1.0	1.68436
GSE145249_1_v_2_ppm1g_human	RummaGEO Gene Perturbation Signatures	-1.0	null
NCI-H820	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04274
membrane	GO Cellular Component Annotations 2015	1.0	null
CTCF	ENCODE Transcription Factor Targets	1.0	null
GABPA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.4393
496100469_TCx_no dementia_TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.1564
U2904	DepMap CRISPR Gene Dependency	1.0	2.03002
A704	CCLE Cell Line Gene CNV Profiles	1.0	1.45147
REC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.39416
L1236	DepMap CRISPR Gene Dependency	1.0	2.33325
YMB-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.77534
GATA3-26560356-CHIP-SEQ-TH2-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
PDX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	53.227
HLF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.5803
Dlx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.7436
REC1	CCLE Cell Line Gene CNV Profiles	1.0	1.75139
integral component of membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.45586
496100426_PCx_no dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.83755
pyrazinamide_mus musculus_gpl6246_gse48027	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
HCC4017	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.909222
membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
Stat6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	39.3488
HESX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.1132
FGFR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.0888
GBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.0176
JL1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.52771
PMC8379183-41467_2021_25326_MOESM9_ESM.xlsx-SALL4_unique_peaks-Unnamed_14_SALL4	Rummagene Transcription Factor Associations 2026	1.0	null
Ebolavirus(ZEBOV)_1day_Spleen_None_GSE57214	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.81928
Erg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	27.5605
NCI-H1648	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.941894
FOXD2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	55.4172
U2OS	DepMap CRISPR Gene Dependency	1.0	2.53464
TP73	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.1327
IRF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.8333
JHU-022	COSMIC Cell Line Gene Mutation Profiles	1.0	null
EN1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.7924
POU2F1::SOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.7006
response to stimulus	GO Biological Process Annotations 2015	1.0	null
NCIH2170	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35077
SUM44PE	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.72675
POU6F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.019
OLIG1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.3736
Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7JF-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
496100420_PCx_probable Alzheimer's disease_no TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.60409
VAX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.0277
appendix	HPA Tissue Protein Expression Profiles	1.0	1.0066
CTCF-20526341-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Nr2e1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	62.3785
BARX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.2423
RAX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.9153
H3K27me3_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5985-11A-01R-1672-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Vdr	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.0681
HOXA5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.3782
detection of chemical stimulus involved in sensory perception of smell	GO Biological Process Annotations 2015	1.0	null
g-protein coupled receptor signaling pathway	GO Biological Process Annotations 2015	1.0	null
SUM159PT	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.38468
PMC7244323-elife-55325-supp3.xlsx-Haapaniemi_TP53-KO-Gene_TP53	Rummagene Transcription Factor Associations 2026	1.0	null
EW8	DepMap CRISPR Gene Dependency	1.0	2.29196
USP2_KO_GSE43517_20_mouse_kidney	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
PMC7244323-elife-55325-supp3.xlsx-This_paper_TP53-KO-Gene_TP53	Rummagene Transcription Factor Associations 2026	1.0	null
HUCCT1	DepMap CRISPR Gene Dependency	1.0	2.16943
A-Vietnam-1203_CIP048_RG3-2004(H5N1)PB1-F2del_4day-MOI-10^4_None_GSE44441	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.77383
CCLP1	DepMap CRISPR Gene Dependency	1.0	2.23923
EHF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.2289
Umbilical vein endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.116
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4691-01A-01R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HOXB2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.112
496100419_TCx_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.15273
cell part	GO Cellular Component Annotations 2015	1.0	null
SKM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.7063
KMS-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.17965
HUH-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.39062
LS1034	DepMap CRISPR Gene Dependency	1.0	2.10664
Kidney renal clear cell carcinoma_KIRC_TCGA-A3-3363-01A-01R-0864-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Ebf4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	36.347
MNX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.4988
Shox2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	28.5701
DUXA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	67.2769
BARHL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.429
Nr1h3::Rxra	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	24.6344
Sox11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	110.195
Hmga1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	103.53
Head and Neck squamous cell carcinoma_HNSC_TCGA-RS-A6TO-01A-32R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FOXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.1637
UNCX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.8558
Dmbx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.5389
GPCR downstream signaling	Reactome Pathways 2014	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5885-01A-11R-1592-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SNU216	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44423
duodenum	HPA Tissue Protein Expression Profiles	1.0	1.0066
HMBOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.614
SETDB1	ChEA Transcription Factor Targets	1.0	null
Irf1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	96.2139
COLO-783	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.909222
JHUEM7	DepMap CRISPR Gene Dependency	1.0	2.00111
MSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.8882
ZNF354A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	150.862
DMS 79	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.43189
SN12C	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SOX10	MotifMap Predicted Transcription Factor Targets	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2MS-06A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HS 746T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.888956
GTL-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.889727
Olfactory Signaling Pathway	Reactome Pathways 2014	1.0	null
Nfatc2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.741
HCC70	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.625577
Nr2e3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.0
Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7JV-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Creb5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	35.547
BARX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.8691
FOXL1	JASPAR Predicted Transcription Factor Targets	1.0	null
ELF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.2751
HOXA3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.5717
Neurod2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	41.3698
JHOS-3	COSMIC Cell Line Gene Mutation Profiles	1.0	null
LOVO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11333
PMC9327205-11658_2022_358_MOESM7_ESM.xlsx-K562-BP1-Symbol_1_DLX4	Rummagene Transcription Factor Associations 2026	1.0	null
CL-40	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.34412
HOXB8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.2481
BHY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.855947
JURKAT	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H920	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0673
Ikzf3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	38.5309
STAT1::STAT2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.1355
ALX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.0193
Atoh1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	92.5032
Sox6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	31.9759
SCC-4	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SNU-601	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.46978
transmembrane signaling receptor activity	GO Molecular Function Annotations 2015	1.0	null
JVM3	CCLE Cell Line Gene CNV Profiles	1.0	1.42155
lipid droplet	GO Cellular Component Annotations 2023	1.0	null
POU2F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.0062
SNU-387	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.46978
Urogenital system	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
SATB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.2917
PMC3348545-NIHMS263168-supplement-3.pdf-299-RARG_RARG	Rummagene Transcription Factor Associations 2026	1.0	null
HOXC4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.3219
HOXC8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.0869
HCC70	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.1352
HCC33	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.43189
H3K27me3_CD8 Naive Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7418-01A-11R-2081-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-NC-A5HO-01A-11R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
VSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.9015
HOXA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.057
TP63	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1179
OAW42	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05316
detection of chemical stimulus	GO Biological Process Annotations 2015	1.0	null
OLIG2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.7056
HUH1	CCLE Cell Line Gene CNV Profiles	1.0	1.40093
NKX6-2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.5855
GSE185519_3_v_2_gilteritinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
MEOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.643
intrinsic component of membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
cell part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
REST-19997604-NEURONS-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
EMX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	53.6155
CEBPG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.4333
HNF1A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.0906
Stat4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	32.0223
BT-549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.3841
MSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.5277
P53-21459846-SAOS-2-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
LMX1A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.73
KMS-34	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.66473
MDA-MB-468	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.909222
NCI-H250	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MHH-ES-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11048
PRRX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.1235
MORCPR	DepMap CRISPR Gene Dependency	1.0	2.48914
Head and Neck squamous cell carcinoma_HNSC_TCGA-QK-A6VB-01A-12R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-GU-A764-01A-11R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCIH1105	CCLE Cell Line Gene CNV Profiles	-1.0	-1.86935
OVCA 420	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.855947
GSE115542_2_v_1_digoxin_human	RummaGEO Drug Perturbation Signatures	1.0	null
NCIH1385	CCLE Cell Line Gene CNV Profiles	1.0	1.37525
Hmx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	30.4952
Lung adenocarcinoma_LUAD_TCGA-49-4486-01A-01R-1206-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ICC2	DepMap CRISPR Gene Dependency	1.0	2.27685
VAX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.7483
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.2867
NKX6-3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.6313
BSX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.4422
GBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.1897
Pancreatic adenocarcinoma_PAAD_TCGA-H6-A45N-11A-12R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCIH1792	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39789
GSE185519_4_v_2_gilteritinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
Hoxa13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	35.1925
TCF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.1739
NUDHL1	CCLE Cell Line Gene CNV Profiles	1.0	1.37167
SNU-1040	COSMIC Cell Line Gene Mutation Profiles	1.0	null
intrinsic component of membrane	GO Cellular Component Annotations 2015	1.0	null
HOXB6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.911
LBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.7406
Gata3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.551
T3M4	CCLE Cell Line Gene CNV Profiles	1.0	1.50295
cell surface receptor signaling pathway	GO Biological Process Annotations 2015	1.0	null
RL95-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HOXA4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.9905
RCOR1	ChEA Transcription Factor Targets	1.0	null
signaling receptor activity	GO Molecular Function Annotations 2015	1.0	null
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.34412
T24	DepMap CRISPR Gene Dependency	1.0	2.73503
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-G8-6907-01A-11R-2213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SNU626	DepMap CRISPR Gene Dependency	1.0	2.20615
signal transduction	GO Biological Process Annotations 2015	1.0	null
VMRC-LCD	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.36222