association	dataset	threshold value	standardized value
Nr1h3::Rxra	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	111.526
Hoxa11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	165.26
Heart	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.48138
cell part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
NCI-H1573	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0195
TBX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.0847
Lung adenocarcinoma_LUAD_TCGA-MP-A4TA-01A-21R-A24X-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Zbtb2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	32.2463
BATF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.682
GSS	CCLE Cell Line Gene CNV Profiles	1.0	1.32927
Esrrg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	154.161
YAPC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16384
membrane	GO Cellular Component Annotations 2015	1.0	null
Hnf1a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	292.89
Alx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	376.293
Lhx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	241.128
Foxl2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	478.57
Olfactory organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.712
DMRTC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.7627
cellular_component	GO Cellular Component Annotations 2015	1.0	null
ONECUT2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.6083
Mecom	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	770.444
496100416_FWM_dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.36041
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-A49A-01A-11R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H1299	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.934155
PMC9378714-41467_2022_31999_MOESM10_ESM.xlsx-Supplementary_Data_7-Supplementary_Data_7_Collation_of_genes_possible_regulated_or_co-expressed_with_ELF5_ELF5	Rummagene Transcription Factor Associations 2026	1.0	null
NCIH1568	CCLE Cell Line Gene CNV Profiles	1.0	1.40109
KU812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.86545
single-multicellular organism process	GO Biological Process Annotations 2015	1.0	null
primary visual cortex (striate cortex, area V1/17)_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.06321
salivarygland	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	0.935746
POLR2A_liver_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-21-5782-01A-01R-1635-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
NFIX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.3387
CAL-85-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
integral component of membrane	GO Cellular Component Annotations 2015	1.0	null
496100391_FWM_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.1708
POU3F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.3779
Npas2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	68.1544
Gli2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	38.5602
FOSL2::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.4457
105KC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11418
DMRTA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.1768
NCI-H1838	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.32901
transmembrane signaling receptor activity	GO Molecular Function Annotations 2015	1.0	null
Neurod2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	154.258
EJM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19795
SOX10	MotifMap Predicted Transcription Factor Targets	1.0	null
NCI-H1688	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Rhox11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	111.738
COLO 678	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.80551
GATA3	ENCODE Transcription Factor Targets	1.0	null
PMC10115638-41591_2023_2255_MOESM4_ESM.xlsx-HGG_MYCN_deletions-Unnamed_6_MYCN	Rummagene Transcription Factor Associations 2026	1.0	null
Hmx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	290.886
Ovary	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.86188
Stat4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	211.412
fallopian tube	GTEx Tissue Gene Expression Profiles	1.0	0.896063
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A2JG-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H650	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-DA-A1I8-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Nasal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.32
PHOX2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.7458
EFM-192A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.12215
regulation of biological process	GO Biological Process Annotations 2015	1.0	null
OTX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.5707
dexamethasone_homo sapiens_gpl6244_gse20963	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
FOS::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.3289
ZNF143	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.2657
PMC7481169-277_2020_4194_MOESM7_ESM.xlsx-RUNX1_R139G-Unnamed_1_RUNX1	Rummagene Transcription Factor Associations 2026	1.0	null
primary visual cortex (striate cortex, area V1/17)_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.904326
Gli1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	39.7569
HS936T	CCLE Cell Line Gene CNV Profiles	-1.0	-2.51896
SOX9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.7763
MSANTD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.5304
inferolateral temporal cortex (area TEv, area 20)_10 mos_M_12977	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.04595
Shox2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	366.08
MDAMB175VII	CCLE Cell Line Gene CNV Profiles	-1.0	-1.6478
Erg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	143.865
inferolateral temporal cortex (area TEv, area 20)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.978648
GBX2-23144817-PC3-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
NCIH2073	CCLE Cell Line Gene CNV Profiles	-1.0	-2.14485
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4813-01A-01R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
posterior (caudal) superior temporal cortex (area 22c)_16 pcw_M_12879	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.10278
Atf1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	27.678
Brain Lower Grade Glioma_LGG_TCGA-DU-A6S2-01A-21R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
POLR2A_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5894-01A-11R-1592-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC9860384-mmc2.xlsx-Table_S4-Table_S4_2016_VCF_Shared_Variants_related_to_the_results_TBX1	Rummagene Transcription Factor Associations 2026	1.0	null
JDP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.1009
SHP77	CCLE Cell Line Gene CNV Profiles	-1.0	-1.71416
odorant binding	GO Molecular Function Annotations 2015	1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2935-03A-01T-0740-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
epidermis	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	0.889922
detection of chemical stimulus	GO Biological Process Annotations 2015	1.0	null
KG1	CCLE Cell Line Gene CNV Profiles	1.0	1.39939
Gata3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	312.387
DU4475	CCLE Cell Line Gene CNV Profiles	-1.0	-1.92401
FOXO1::ELF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.9579
Arx	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	459.583
olfactory receptor activity	GO Molecular Function Annotations 2015	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-CC-5263-01A-01R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SUM 52PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.931236
Kidney renal clear cell carcinoma_KIRC_TCGA-AK-3427-01A-01R-0864-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
orbital frontal cortex_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.876186
primary auditory cortex (core)_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.7245
Hoxa13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	438.655
anterior (rostral) cingulate (medial prefrontal) cortex_13 pcw_M_12820	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.0363
TCF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.5391
intrinsic component of membrane	GO Cellular Component Annotations 2015	1.0	null
CEBPA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.9335
Rectum adenocarcinoma_READ_TCGA-DY-A1DE-01A-11R-A155-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Six4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	109.246
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GS-A9TV-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Sox11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	409.933
DETROIT 562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19795
Lymphoma_burkitts(Daudi)	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.8363
C2BBE1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
LNCaP clone FGC	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.368
orbital frontal cortex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.04963
Pancreatic adenocarcinoma_PAAD_TCGA-H6-A45N-11A-12R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HSF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.1993
Nr2f6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	502.911
posteroventral (inferior) parietal cortex_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.58887
primary motor cortex (area M1, area 4)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.24942
inferolateral temporal cortex (area TEv, area 20)_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.824253
PAX6	ChEA Transcription Factor Targets	1.0	null
H3K9me3_H9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
NCI-H1437	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.879027
Npas4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	47.6827
sensory perception of smell	GO Biological Process Annotations 2015	1.0	null
Lung adenocarcinoma_LUAD_TCGA-44-7661-01A-11R-2066-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
WFS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3688
Nkx3-2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	188.295
receptor activity	GO Molecular Function Annotations 2015	1.0	null
Carboxypeptidase N deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.069
NCI-H2110	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-EJ-A65D-01A-11R-A30B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12815
496100426_PCx_no dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.50086
496100466_PCx_probable Alzheimer's disease_no TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.08771
RERFLCAD2	CCLE Cell Line Gene CNV Profiles	1.0	1.52578
PAX6-23342162-BETA-FORBRAIN-LENS-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
Gmeb1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	13.705
NCIH2405	CCLE Cell Line Gene CNV Profiles	-1.0	-1.441
GPCR, rhodopsin-like, 7TM	InterPro Predicted Protein Domain Annotations	1.0	null
Sarcoma_SARC_TCGA-FX-A3RE-01A-11R-A22K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BACH2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.5999
Yy1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	168.559
NCI-H292	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.34701
pyrazinamide_mus musculus_gpl6246_gse48027	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
amygdaloid complex_26 pcw_F_12949	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.839896
K2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
binding	GO Molecular Function Annotations 2015	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-DU-5854-01A-11R-1708-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.889068
BATF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.3406
primary motor cortex (area M1, area 4)_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.01077
MELK_knockdown_150_GSE32873	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-2.2956
Hoxd13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	414.241
Brain Lower Grade Glioma_LGG_TCGA-FG-5963-02A-12R-A29R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Olfactory receptor	InterPro Predicted Protein Domain Annotations	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-FS-A1ZF-06A-12R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prdm4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	170.708
g-protein coupled receptor activity	GO Molecular Function Annotations 2015	1.0	null
TBR1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.0045
upper (rostral) rhombic lip_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.22827
G122	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00468
Bladder Urothelial Carcinoma_BLCA_TCGA-FJ-A3ZF-01A-11R-A23N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MCF-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.4883
SKMEL2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.80431
dorsolateral prefrontal cortex_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.01937
CAMA1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.60009
ESS-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SUM52PE	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.09056
Nr1h3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	154.731
JUN::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.1301
Nfe2l2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	143.825
molecular transducer activity	GO Molecular Function Annotations 2015	1.0	null
HCC2185	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.722552
HCC2998	COSMIC Cell Line Gene Mutation Profiles	1.0	null
primary visual cortex (striate cortex, area V1/17)_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.12287
NCI-H727	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.5909
DU4475	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.54867
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5088-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
signal transducer activity	GO Molecular Function Annotations 2015	1.0	null
A-427	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.964249
GPCR downstream signaling	Reactome Pathways 2014	1.0	null
Olfactory Signaling Pathway	Reactome Pathways 2024	1.0	null
ETK-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Cancer	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.559
KPL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33615
496100419_TCx_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	6.55771
NCI-H1792	COSMIC Cell Line Gene CNV Profiles	1.0	2.12225
mediodorsal nucleus of thalamus_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.92958
Thymus	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.967637
PKNOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.4379
H3K27me3_keratinocyte_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
VMRC-LCD	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Sarcoma_SARC_TCGA-HB-A2OT-01A-11R-A21T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
single-organism process	GO Biological Process Annotations 2015	1.0	null
HSF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.0523
MEL-HO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.12215
SUM159PT	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.741151
SF295	CCLE Cell Line Gene CNV Profiles	-1.0	-1.45278
cell part	GO Cellular Component Annotations 2015	1.0	null
MEIS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	78.7977
Sox6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	264.241
Disease of cellular proliferation	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.559
RPMI-7951	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.15323
SK-LU-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Rarg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	606.357
HD-MY-Z	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Bcl11b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	252.228
HNF1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.1198
detection of chemical stimulus involved in sensory perception	GO Biological Process Annotations 2015	1.0	null
NCI-H2073	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.02574
MEIS2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.4591
cerebellum_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.98655
FOSL1::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.6683
NRL	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.3031
Pou5f1::Sox2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	560.721
PrefrontalCortex	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.986585
cervix uteri	GTEx Tissue Gene Expression Profiles	1.0	1.10128
SCC15	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39283
ventrolateral prefrontal cortex_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.06723
HCC2218	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.971498
JHH-5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19029
ZFP42	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.637
WSU-NHL	COSMIC Cell Line Gene Mutation Profiles	1.0	null
TBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.0754
Olfactory transduction	KEGG Pathways 2026	1.0	null
KU1919	CCLE Cell Line Gene CNV Profiles	-1.0	-1.37163
Irf1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	676.499
Head and Neck squamous cell carcinoma_HNSC_TCGA-TN-A7HL-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
OlfactoryBulb	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.917545
NFIC::TLX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.25
928 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.879027
Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7JJ-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
G44	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.10518
Spi1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	246.587
primary auditory cortex (core)_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.08547
MDA-MB-330	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.969439
GATA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.5
inferolateral temporal cortex (area TEv, area 20)_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.13621
Foxj3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	562.662
G130	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.842982
EBC1	CCLE Cell Line Gene CNV Profiles	1.0	1.76721
orbital frontal cortex_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.44029
SW 620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0914
Nkx2-1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	103.02
ONECUT1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	65.4985
HSF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.5912
MCF7	CCLE Cell Line Gene CNV Profiles	-1.0	-1.76177
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.18089
MDA-MB-175-VII	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.48867
DBP	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.8651
Skin Cutaneous Melanoma_SKCM_TCGA-FS-A1YW-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
dorsolateral prefrontal cortex_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.06427
Dlx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	342.744
KPL1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.42629
496100421_PCx_probable Alzheimer's disease_TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.40625
primary visual cortex (striate cortex, area V1/17)_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.12253
NCIH1792	CCLE Cell Line Gene CNV Profiles	1.0	2.50423
Signaling by GPCR	Reactome Pathways 2014	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-MT-A7BN-01A-12R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
inferolateral temporal cortex (area TEv, area 20)_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.07543
GlobusPallidus	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.967637
molecular_function	GO Molecular Function Annotations 2015	1.0	null
Rfx6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	49.5216
orbital frontal cortex_23 yrs_M_12300	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.61745
ERF::FOXO1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.9212
SNU-387	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26234
RPMI 8226	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.38294
NCI-H647	COSMIC Cell Line Gene Mutation Profiles	1.0	null
mediodorsal nucleus of thalamus_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.81743
posterior (caudal) superior temporal cortex (area 22c)_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.970713
FOXB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.6244
OVCA 432	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.879597
plasma membrane	GO Cellular Component Annotations 2015	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2GB-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19795
Lung squamous cell carcinoma_LUSC_TCGA-63-A5MV-01A-21R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Gfi1b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	273.196
SCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00468
Atf3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	111.323
CUX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.4787
ETV2::FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.5083
ZNF85_01_126	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	0.99967
HNF1A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.2391
Dlx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	336.143
Nfat5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	305.132
embryonic stem no feeder	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.890381
EOMES	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7525
CREB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.2641
posterior (caudal) superior temporal cortex (area 22c)_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.60612
LU-165	COSMIC Cell Line Gene Mutation Profiles	1.0	null
KYSE-510	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ZNF410	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.4055
NCIH1395	CCLE Cell Line Gene CNV Profiles	1.0	2.88587
POLR2A	ENCODE Transcription Factor Targets	1.0	null
Sox17	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	333.3
PANC0813	CCLE Cell Line Gene CNV Profiles	1.0	1.40194
Dlx2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	195.863
CDX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.6792
POU4F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.0731
NCIH1838	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
EPHA4_knockout_226_GSE34430	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	2.1323
PCI-30	COSMIC Cell Line Gene Mutation Profiles	1.0	null
FOSL1::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.4278
Nanog	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	123.975
Disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.559
NCI-H1568	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.10903
primary somatosensory cortex (area S1, areas 3,1,2)_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.16586
LM3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.656
NCIH727	CCLE Cell Line Gene CNV Profiles	1.0	1.58345
posterior (caudal) superior temporal cortex (area 22c)_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.977017
intrinsic component of membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
Sox5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	294.895
HEC50B	CCLE Cell Line Gene CNV Profiles	1.0	1.79926
Arid3b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	392.729
Signal Transduction	Reactome Pathways 2014	1.0	null
Gastric epithelium cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.68
Kidney renal clear cell carcinoma_KIRC_TCGA-A3-3335-01A-01R-0864-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NFIL3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9222
integral component of membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
Kidney renal papillary cell carcinoma_KIRP_TCGA-SX-A7SN-01A-11R-A355-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.12132
Runx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	135.376
496100367_FWM_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.68243
MEWO	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2GH-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MAFK	ENCODE Transcription Factor Targets	1.0	null
Zic3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	50.1817
Thap11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	186.095
496100459_PCx_no dementia_no TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.35003
Hematologic cancer	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.559
primary motor cortex (area M1, area 4)_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.959866
retina	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.846731
IGR-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CHD1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SUM 149PT	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.86371
SNU-638	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2738
Sensory Perception	Reactome Pathways 2024	1.0	null
NCIH2052	CCLE Cell Line Gene CNV Profiles	1.0	1.33938
olfactory receptor activity	GO Molecular Function Annotations 2023	1.0	null
TBX15	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.2808
Zic2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	85.8155
Lung adenocarcinoma_LUAD_TCGA-44-3396-01A-01R-1206-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MALME3M	CCLE Cell Line Gene CNV Profiles	-1.0	-1.5314
NCI-H28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26234
response to stimulus	GO Biological Process Annotations 2015	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-GF-A4EO-06A-12R-A24X-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
VENTX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9945
Head and Neck squamous cell carcinoma_HNSC_TCGA-P3-A6T2-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CREB3L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.8177
posterior (caudal) superior temporal cortex (area 22c)_19 pcw_F_12885	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.27403
496100460_TCx_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.60397
signal transduction	GO Biological Process Annotations 2015	1.0	null
NCI-H820	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01582
Acute Myeloid Leukemia_LAML_TCGA-AB-2849-03A-01T-0734-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TGIF2LY	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.3554
Hmx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	299.485
ventrolateral prefrontal cortex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.950402
primary motor cortex (area M1, area 4)_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.14759
regulation of cellular process	GO Biological Process Annotations 2015	1.0	null
DB	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.890291
inferolateral temporal cortex (area TEv, area 20)_13 pcw_M_12820	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.41545
HBL-100	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.12215
biological_process	GO Biological Process Annotations 2015	1.0	null
NCI-H716	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.20773
HCC515	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.934155
Ebf4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	69.0943
496100409_FWM_no dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.07917
estradiol_mus musculus_gpl4134_gse23072	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SF539	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.94216
ZR751	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.757579
ZNF211	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.029
AHR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.8502
SK-MEL-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23915
g-protein coupled receptor signaling pathway	GO Biological Process Annotations 2015	1.0	null
sensory perception of chemical stimulus	GO Biological Process Annotations 2015	1.0	null
membrane	LOCATE Predicted Protein Localization Annotations	1.0	null
Arid5a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	536.16
system process	GO Biological Process Annotations 2015	1.0	null
WIDR	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.890291
FOXL1	JASPAR Predicted Transcription Factor Targets	1.0	null
Stat5a::Stat5b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	186.926
CAL-12T	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PAX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.6977
liver	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	2.09859
CFPAC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16384
Sarcoma_SARC_TCGA-MO-A47R-01A-11R-A24X-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SW-48 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.683
HCC1395	CCLE Cell Line Gene CNV Profiles	1.0	1.53194
integral component of plasma membrane	GO Cellular Component Annotations 2015	1.0	null
GATA1::TAL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.8059
plasma membrane part	GO Cellular Component Annotations 2015	1.0	null
CUX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.5373
Mafb	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	252.537
HCC193	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.27156
Liver hepatocellular carcinoma_LIHC_TCGA-BC-A3KG-01A-11R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-66-2790-01A-01R-0980-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cerebellar cortex_26 pcw_F_12949	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.13579
CREM	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.3008
Dopaminergic synapse	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.796
MCC13	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A51N-06A-11R-A266-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MDAMB453	CCLE Cell Line Gene CNV Profiles	1.0	1.37226
cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
Leukemia	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.559
Bach1::Mafk	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	102.719
Lhx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	284.155
NCI-H1651	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.969439
KYSE30	CCLE Cell Line Gene CNV Profiles	1.0	1.90633
Nr1h2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	152.754
Liver hepatocellular carcinoma_LIHC_TCGA-CC-5260-01A-01R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Hic1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	101.022
Apocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.839
orbital frontal cortex_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.977017
Nfatc2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	230.96
striatum_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.4308
posteroventral (inferior) parietal cortex_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.72877
POLR2A_MCF 10A_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FOXD2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.162
Lung adenocarcinoma_LUAD_TCGA-75-5147-01A-01R-1628-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BNC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.1368
TGIF2LX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.8559
POU3F2-20337985-501MEL-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
GBX2-23144817-PC3-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-43-6143-01A-11R-1820-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
primary visual cortex (striate cortex, area V1/17)_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.854602
KP-N-YS	COSMIC Cell Line Gene Mutation Profiles	1.0	null
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
SOX15	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.2998
496100420_PCx_probable Alzheimer's disease_no TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.69967
striatum_37 yrs_M_12303	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.840646
SK-MEL-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.65971
Nasal cavity	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.241
BFTC-905	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Acute leukemia	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.559
ML1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34223
pancreas	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.71146
Lung squamous cell carcinoma_LUSC_TCGA-56-7221-01A-11R-2045-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5187-01A-01R-1426-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC10709143-41556_2023_1271_MOESM9_ESM.xls-Up_in_PAX7--Target_name_PAX7	Rummagene Transcription Factor Associations 2026	1.0	null
CTCF_fibroblast of dermis_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
496100469_TCx_no dementia_TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.99952
MIA PACA-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.879597
EPLC-272H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.890291
Ar	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	94.989
SUM185PE	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-2.22174
FLI1::FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.5238
Stat6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	272.66
TE4	CCLE Cell Line Gene CNV Profiles	1.0	2.09989
Creb5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	105.3
orbital frontal cortex_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.14759
SKMEL28	CCLE Cell Line Gene CNV Profiles	-1.0	-1.59796
dexamethasone_homo sapiens_gpl4133_gse42619	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HUH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.25952
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4691-01A-01R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Acute lymphoblastic leukemia	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.559
Lung adenocarcinoma_LUAD_TCGA-05-4398-01A-01R-1206-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FOXC1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.9559
bone	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.0264
EBC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.31107
Nobox	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	417.632
FOSL2::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.3072
Olfactory Signaling Pathway	Reactome Pathways 2014	1.0	null
HOXD9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.7716
Alx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	438.227
JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.3551
ONECUT3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	115.01
IGR39	CCLE Cell Line Gene CNV Profiles	1.0	1.57915
JJ012	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.928281
ZNF324	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.0446
medial ganglionic eminence_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.911567
KMM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.964249
Foxj2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	433.555
PMC10115638-41591_2023_2255_MOESM4_ESM.xlsx-LGG_MYB_L1_deletions-Unnamed_2_MYB	Rummagene Transcription Factor Associations 2026	1.0	null
ZR751	CCLE Cell Line Gene CNV Profiles	-1.0	-1.47549
NCI-H727	COSMIC Cell Line Gene CNV Profiles	1.0	2.12225
MDA-MB-134-VI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.851341
membrane part	GO Cellular Component Annotations 2015	1.0	null
POU3F2	ChEA Transcription Factor Targets	1.0	null
cell surface receptor signaling pathway	GO Biological Process Annotations 2015	1.0	null
detection of chemical stimulus involved in sensory perception of smell	GO Biological Process Annotations 2015	1.0	null
LMX1A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.9631
Twist2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	35.7789
Stat5a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	185.84
posterior (caudal) superior temporal cortex (area 22c)_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.863469
Skin Cutaneous Melanoma_SKCM_TCGA-ER-A19B-06A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CAOV4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.98303
Pancreatic adenocarcinoma_PAAD_TCGA-HZ-A4BK-01A-11R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.553
TUBA1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.92201
TE11	CCLE Cell Line Gene CNV Profiles	1.0	1.62185
FOXC1	JASPAR Predicted Transcription Factor Targets	1.0	null
ZNF652	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.8644
PANC-04-03	COSMIC Cell Line Gene Mutation Profiles	1.0	null
hippocampus (hippocampal formation)_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.05306
Bladder Urothelial Carcinoma_BLCA_TCGA-GV-A3JZ-01A-11R-A21D-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC11625982-AJH-100-10-s001.pdf-19-ZNF721_ZNF721	Rummagene Transcription Factor Associations 2026	1.0	null
Bhlha15	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	136.429
A-498	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23417
SUM1315MO2	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.14633
Bladder Urothelial Carcinoma_BLCA_TCGA-E5-A4TZ-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Atoh1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	328.06
Nuclear inner membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.206
SOX21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.1123
496100418_TCx_no dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	7.65926
Sox3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	190.141
496100472_PCx_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.25669
Stat5b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	162.475
Liver	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.21582
SARS-BatSRBD_Day4_None_GSE50000	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.88701
anterior (rostral) cingulate (medial prefrontal) cortex_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.848982
G protein-coupled receptor, rhodopsin-like	InterPro Predicted Protein Domain Annotations	1.0	null
CTCF	ENCODE Transcription Factor Targets	1.0	null
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
FOXC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.3776
YIPF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6571
Zic1::Zic2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	39.7898
G96	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.037
Ebf2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	50.8553
mediodorsal nucleus of thalamus_10 mos_M_12977	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.69071
DEL	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Tbx6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	123.854
HUH7	CCLE Cell Line Gene CNV Profiles	1.0	1.46265
Lung squamous cell carcinoma_LUSC_TCGA-56-A49D-01A-11R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
COLO678	CCLE Cell Line Gene CNV Profiles	-1.0	-1.91111
Lung adenocarcinoma_LUAD_TCGA-93-A4JQ-01A-11R-A24X-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Foxo3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	225.126
Hand1::Tcf3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	109.172
dorsolateral prefrontal cortex_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.88918
OVISE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.969439
STAT4	MotifMap Predicted Transcription Factor Targets	1.0	null
LS-180 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.808
anterior (rostral) cingulate (medial prefrontal) cortex_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.07677
Crx	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	155.577
Scent gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.481
Creb3l2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	37.0338
DUXA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.2686
A498	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39197
Skin Cutaneous Melanoma_SKCM_TCGA-QB-A6FS-06A-11R-A311-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-S9-A7R7-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H1395	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.19301
H3255	COSMIC Cell Line Gene CNV Profiles	1.0	2.12225
intrinsic component of plasma membrane	GO Cellular Component Annotations 2015	1.0	null
H3K9me3_osteoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
posterior (caudal) superior temporal cortex (area 22c)_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.01937
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A4ND-01A-11R-A266-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Six3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	156.474
A-673	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.64685
dorsolateral prefrontal cortex_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	3.40409
MAFA	MotifMap Predicted Transcription Factor Targets	1.0	null
G59	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4499
MDAMB453	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.88595
Rxra	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	199.195
Lymphoid leukemia	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.559
Nr2e3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	128.913
Hmga1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	815.196
Nfatc1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	173.414
HCC33	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23417
Lung adenocarcinoma_LUAD_TCGA-95-7944-01A-11R-2187-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
anterior (rostral) cingulate (medial prefrontal) cortex_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.07677
TE5	CCLE Cell Line Gene CNV Profiles	1.0	2.17899
primary somatosensory cortex (area S1, areas 3,1,2)_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.01014
PMC7244323-elife-55325-supp3.xlsx-Haapaniemi_TP53-KO-Gene_TP53	Rummagene Transcription Factor Associations 2026	1.0	null
anterior (rostral) cingulate (medial prefrontal) cortex_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.08328
GBX2	ChEA Transcription Factor Targets	1.0	null
Photoreceptor distal connecting cilium	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.762
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.890291
POU3F2-20337985-501MEL-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Pax7	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	804.119
Nr5a2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	76.3894
Spz1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	64.8333
TBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.7668
Msgn1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	222.596
SW 1417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12707
preoptic	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-2.59923
PMC3919509-NIHMS471461-supplement-3.xls-Table_S1-ZNF33A_ZNF33A	Rummagene Transcription Factor Associations 2026	1.0	null
NCIH322	CCLE Cell Line Gene CNV Profiles	-1.0	-2.09012
Dmbx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	165.597
NEUROG2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.6105
Liver hepatocellular carcinoma_LIHC_TCGA-CC-5264-01A-01R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Ikzf3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	82.3516
multicellular organismal process	GO Biological Process Annotations 2015	1.0	null
SR	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Warfarin resistance	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.287
mediodorsal nucleus of thalamus_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.06427
detection of stimulus involved in sensory perception	GO Biological Process Annotations 2015	1.0	null
NFIC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.1681
SOX8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.7221
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
CardiacMyocytes	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-2.47226
NCI-H1930	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03588
Ppara	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	127.148
POU5F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.5357
YMB-1-E	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23417
Skin Cutaneous Melanoma_SKCM_TCGA-FR-A729-06A-11R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
IGR1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44261
KDM5A_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
UACC893	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.08917
HT-29	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.889068
trigeminal	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.31511
COLO-668	COSMIC Cell Line Gene Mutation Profiles	1.0	null
neuro2a	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.25118
Tcf21	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	135.832
CAKI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.890291
pituitary	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.02272
PMC7481169-277_2020_4194_MOESM7_ESM.xlsx-RUNX1_R174L-Unnamed_1_RUNX1	Rummagene Transcription Factor Associations 2026	1.0	null
Msx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	370.457
EZH2	ENCODE Transcription Factor Targets	1.0	null
biological regulation	GO Biological Process Annotations 2015	1.0	null
OKAJIMA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.933579
amygdaloid complex_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.15787
Liver hepatocellular carcinoma_LIHC_TCGA-ZS-A9CF-02A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
detection of stimulus	GO Biological Process Annotations 2015	1.0	null
posterior (caudal) superior temporal cortex (area 22c)_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.00069
DCTN3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.02584
NUGC-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.880873
GATA3_01_163	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.61265
NCIH716	CCLE Cell Line Gene CNV Profiles	-1.0	-2.38183
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-4723-01A-01R-1436-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-FJ-A3Z7-01A-12R-A23N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cerebellar cortex_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.26125
CAR-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.5321
PA-TU-8988T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12707
SW684	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CAMA-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.39305
Nr2e1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	342.307
DU-145	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SK-MEL-28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.60835
IPC-298	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.39305
BFTC-905	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.6737
primary somatosensory cortex (area S1, areas 3,1,2)_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.54827
Expression and translocation of olfactory receptors	Reactome Pathways 2024	1.0	null
Mafg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	104.327
primary motor cortex (area M1, area 4)_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.832295
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26234
MEIS3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.4187
HT-115	COSMIC Cell Line Gene Mutation Profiles	1.0	null
RB1_KD_GSE50532_624_human_OSTEOBLASTS	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
FOSB::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.7979
Olig2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	35.675
SPIC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.2438
primary motor-sensory cortex (samples)_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.32956
Prdm14	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	68.8866
Lhx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	1099.85
anterior (rostral) cingulate (medial prefrontal) cortex_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.20402
HOXB7_01_170	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.60598
Nkx3-1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	66.165
Ascl2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	66.4543
MCF7	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.953803
KDM5A	ENCODE Transcription Factor Targets	1.0	null
YMB1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.42323
CHD1	ENCODE Transcription Factor Targets	1.0	null
BATF::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.4592
Lhx8	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	332.272
G111	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03588
Pparg::Rxra	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	191.897
amygdaloid complex_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.876186
Kidney renal papillary cell carcinoma_KIRP_TCGA-SX-A7SO-01A-11R-A355-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Zfp809	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	124.08
Wt1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	73.347
Prdm5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	149.191
Cholinergic synapse	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.772
posterior (caudal) superior temporal cortex (area 22c)_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.3286
Lef1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	224.654
RAMOS-2G6-4C10	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BHY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.45634
primary visual cortex (striate cortex, area V1/17)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.1125
mediodorsal nucleus of thalamus_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.832295
TBX20	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.1969
CDX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.4269
NCI-H1838	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-3.64461
ZR-75-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23473
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A1EA-01A-11R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A1MF-01A-11R-A13Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	104.722
Bladder Urothelial Carcinoma_BLCA_TCGA-G2-A3VY-01A-11R-A22U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HS 936.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.48078
Arid3a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	556.222
NCI-H1395	COSMIC Cell Line Gene CNV Profiles	1.0	2.12225
anterior (rostral) cingulate (medial prefrontal) cortex_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.902429
NCI-H2171	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.45106
cell periphery	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
KYSE-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.7815
Dlx5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	198.038
ZR7530	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.32694
FOS::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.1938
plasma membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
Jun	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	114.923
MZ7-MEL	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HOXA10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.698
FOS::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7807
EZH2_fibroblast of dermis_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Ptf1a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	472.361
ZNF354A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	54.7896
FOXJ2::ELF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.4045
Tongue epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.217
KYSE-450	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.876028
LNZ308	CCLE Cell Line Gene CNV Profiles	-1.0	-1.56486
COLO-792	COSMIC Cell Line Gene Mutation Profiles	1.0	null
RCC-AB	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HCC1143	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.964088
Rarb	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	688.0
GATA3_SH-SY5Y_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EMC-BAC-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
signaling receptor activity	GO Molecular Function Annotations 2015	1.0	null
NKX2-5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.2867
Brain Lower Grade Glioma_LGG_TCGA-P5-A72U-01A-31R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
primary somatosensory cortex (area S1, areas 3,1,2)_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.832295
YMB-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23417
Dmrt1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	238.56
Nr5a1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	120.43
SCC4	CCLE Cell Line Gene CNV Profiles	1.0	2.37898
Elf5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	219.321
Foxo1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	242.673
SRY	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.6429
b220.bcell	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.28032
Lung squamous cell carcinoma_LUSC_TCGA-94-7557-01A-11R-2125-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MAFK_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
plasma membrane	LOCATE Predicted Protein Localization Annotations	1.0	null
ZSCAN16	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.8158
CFPAC1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32572
NCIH2171	CCLE Cell Line Gene CNV Profiles	1.0	1.4736
Vdr	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	146.256
UM-UC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.879027
Lymphoma_burkitts(Raji)	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.8152
Sox7	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	280.899
H3K9me3_keratinocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Zfp335	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	131.679
TBX5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.059
ROCK_INHIBITION_GDS3944_461_mouse_Forebrain astrocytes - 2 Hours	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
neurological system process	GO Biological Process Annotations 2015	1.0	null
Isl1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	99.1675
Smad4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	75.471
PMC7244323-elife-55325-supp3.xlsx-Noordermeer_TP53-KO-Gene_TP53	Rummagene Transcription Factor Associations 2026	1.0	null
COLO 857	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.79726
JHH5	CCLE Cell Line Gene CNV Profiles	1.0	1.86173
Esophagus - Gastroesophageal Junction	GTEx Tissue Gene Expression Profiles 2023	1.0	7.21239
PVR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.6928
Neuro D	MotifMap Predicted Transcription Factor Targets	1.0	null
Asi complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.459
FOXA1-26743006-CHIP-SEQ-LNCAP-ABL-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
NR1I3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.6752
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A1Q5-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HCC1011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00468
MOLP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.890291
POU4F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.826
membrane part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
Dux	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	423.314
Skin Cutaneous Melanoma_SKCM_TCGA-D9-A4Z2-01A-11R-A24X-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.0788
COLO 794	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.913884
NFATC3_01_166	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.60834
Arntl	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	29.7119
striatum_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.986468
Nr1h4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	129.91
cerebellar cortex_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.10768
H3K27me3_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H513	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Tcf12	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	64.1375
COLO 853	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.83203
Heroin dependence	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.142
BARX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.1332
Brain Lower Grade Glioma_LGG_TCGA-HW-8321-01A-11R-2404-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
POU4F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.0797
TGIF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.6905
TGIF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.6331
OE21	CCLE Cell Line Gene CNV Profiles	1.0	2.03227
Hmx2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	670.716
LY2	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.982904
NCIH3255	CCLE Cell Line Gene CNV Profiles	1.0	1.70464
icSARS-Cov_Day4_None_GSE50000	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	2.24817
Skin Cutaneous Melanoma_SKCM_TCGA-EB-A6R0-01A-12R-A32P-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Sarcoma_SARC_TCGA-QQ-A8VH-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-RC-A7SK-01A-11R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.79726
TE-5	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Sox1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	655.415
posteroventral (inferior) parietal cortex_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.12287
inferolateral temporal cortex (area TEv, area 20)_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.921285
Stat2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	1074.68
sensory perception of chemical stimulus	GO Biological Process Annotations 2023	1.0	null
COPS4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.15546
Foxf1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	196.404
sensory perception of smell	GO Biological Process Annotations 2023	1.0	null
brownfat	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.33212
TEF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.8122
TE-11	COSMIC Cell Line Gene Mutation Profiles	1.0	null
H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.79726
ZNF8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.0717
sensory perception	GO Biological Process Annotations 2015	1.0	null
PANC 03.27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.964249
Prdm15	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	219.72
SOX18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.8364
SNU-81	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H2087	COSMIC Cell Line Gene Mutation Profiles	1.0	null
496100458_FWM_no dementia_no TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.13487
Taste bud	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.606
PMC7244323-elife-55325-supp3.xlsx-This_paper_TP53-KO-Gene_TP53	Rummagene Transcription Factor Associations 2026	1.0	null
KP3	CCLE Cell Line Gene CNV Profiles	1.0	1.4245
TE6	CCLE Cell Line Gene CNV Profiles	1.0	1.53077
SW837	COSMIC Cell Line Gene Mutation Profiles	1.0	null
hippocampus (hippocampal formation)_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.87773
primary visual cortex (striate cortex, area V1/17)_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.942692
SNU-182	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Olfactory epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.389
H3K9me3_CH12.LX_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
Organ system cancer	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.559