association	dataset	threshold value	standardized value
RUNX1-27514584-CHIP-SEQ-MCF-7-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
LOX-IMVI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.980632
HDAC2	ENCODE Transcription Factor Targets	1.0	null
PMC9643473-Table1.xls-MAF_0_005-HGVS_gene_MAF	Rummagene Transcription Factor Associations 2026	1.0	null
KMS-12-PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.43888
GSE175787_4_v_10_rhoc_human	RummaGEO Gene Perturbation Signatures	1.0	null
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-FA-A7DS-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
496100412_FWM_possible Alzheimer's disease_TBI_87_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.20813
U266B1	CCLE Cell Line Gene CNV Profiles	1.0	2.28595
SREBF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.1826
TFEB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.0833
KMS-34	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.17481
OPA1	Pathway Commons Protein-Protein Interactions	1.0	null
FAHD1	Pathway Commons Protein-Protein Interactions	1.0	null
GSE216043_7_v_6_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
HS 746T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.29374
RBM28	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.13269
Uterine Carcinosarcoma_UCS_TCGA-N5-A4RD-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC5564849__F5	PFOCR Pathway Figure Associations 2024	1.0	null
GSE213228_2_v_3_irak2_human	RummaGEO Gene Perturbation Signatures	1.0	null
SLC18B1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78651
OVK18	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34704
GSE213650_3_v_2_everolimus_human	RummaGEO Drug Perturbation Signatures	1.0	null
POLR2A	ENCODE Transcription Factor Targets	1.0	null
MLXIPL	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.8733
ZNF510	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.71408
SNU-81	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.980632
NCI-H1581	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.947999
FOLH1	Pathway Commons Protein-Protein Interactions	1.0	null
NCI-H1435	COSMIC Cell Line Gene Mutation Profiles	1.0	null
KMM1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.54191
H3K9me3_CD34 Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
ZNF274	ChEA Transcription Factor Targets	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A1Q5-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TE-6	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GSE216043_7_v_5_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-EJ-8470-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
OE21	DepMap CRISPR Gene Dependency	1.0	2.24043
L-1236	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CAL-12T	COSMIC Cell Line Gene Mutation Profiles	1.0	null
head	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051664
GSE216043_7_v_2_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
NFKB1-27076634-BEAS2B-HUMAN-LUNG-INFLAMMATION	ChEA Transcription Factor Targets 2022	1.0	null
Lung adenocarcinoma_LUAD_TCGA-55-A493-01A-11R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SNU1079	DepMap CRISPR Gene Dependency	1.0	2.36764
GSE103309_2_v_0_ube3a_human	RummaGEO Gene Perturbation Signatures	-1.0	null
NCO2	CCLE Cell Line Gene CNV Profiles	1.0	1.83118
Pancreatic adenocarcinoma_PAAD_TCGA-L1-A7W4-01A-12R-A36G-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-RT-A6YC-01A-12R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Throat	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Bronchus	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
COGE352	DepMap CRISPR Gene Dependency	1.0	2.55214
PACADD165	DepMap CRISPR Gene Dependency	1.0	3.00951
NANOG-19829295-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
PMC4387713-supp_gad.255984.114_Table_S5.xlsx-S5E-Down_H3K27me3_DPY30_KD-Unnamed_12_AR	Rummagene Transcription Factor Associations 2026	1.0	null
ARH-77	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H835	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Cerebellum	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
cell type cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.166544
Nuclear telomere cap complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.05
brain	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053144
TNPO1	Pathway Commons Protein-Protein Interactions	1.0	null
Limbic system	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
MYC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.3276
496100348_TCx_probable Alzheimer's disease_no TBI_79_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	7.64469
NCI-H2291	COSMIC Cell Line Gene Mutation Profiles	1.0	null
KMRC-20	COSMIC Cell Line Gene Mutation Profiles	1.0	null
FU97	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Lung adenocarcinoma_LUAD_TCGA-05-4424-01A-22R-1858-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-548q	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
Lymphoid cell	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.033
SCC-25	COSMIC Cell Line Gene Mutation Profiles	1.0	null
KELLY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.37855
PMC12534504-41598_2025_20489_MOESM1_ESM.pdf-349-EBF4_EBF4	Rummagene Transcription Factor Associations 2026	1.0	null
Large granular lymphocyte	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.033
MYC-19829295-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Sarcoma_SARC_TCGA-SG-A6Z7-01A-12R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TP73	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.2691
PRDM1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.7417
DMS-79	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Mouth	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.039783
SBC5	CCLE Cell Line Gene CNV Profiles	-1.0	-1.83699
RBM39	Pathway Commons Protein-Protein Interactions	1.0	null
HCC2688	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.41504
organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
21NT	DepMap CRISPR Gene Dependency	1.0	2.5515
Hindbrain	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Mesothelioma_MESO_TCGA-LK-A4NZ-01A-12R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HCC1359	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.43813
DU-145	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SK-MES-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.040049
BHLHE40	ENCODE Transcription Factor Targets	1.0	null
DU145	CCLE Cell Line Gene CNV Profiles	1.0	1.54583
CW-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-YL-A8SR-01B-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
496100607_TCx_dementia_TBI_77_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.12735
Brain Lower Grade Glioma_LGG_TCGA-E1-A7YW-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FAM83F	Pathway Commons Protein-Protein Interactions	1.0	null
Connective tissue	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
H3K9me3_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
METTL7A	Pathway Commons Protein-Protein Interactions	1.0	null
HES7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	48.9556
PMC8709578-elife-69843-supp2.xlsx-HSF1_KO_2_Ctr-Gene_Name_HSF1	Rummagene Transcription Factor Associations 2026	1.0	null
COV644	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.61615
496100287_TCx_no dementia_TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.02833
hsa-miR-661	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
NCI-H196	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.92443
Cloacal exstrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.223
GSE115395_2_v_0_enzalutamide_human	RummaGEO Drug Perturbation Signatures	1.0	null
Uterine Carcinosarcoma_UCS_TCGA-N8-A4PQ-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SNU1	DepMap CRISPR Gene Dependency	1.0	2.34207
RUVBL1	Pathway Commons Protein-Protein Interactions	1.0	null
intracellular part	LOCATE Predicted Protein Localization Annotations	1.0	null
SLR26	DepMap CRISPR Gene Dependency	1.0	3.00091
chromosome, telomeric repeat region	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.048
Brain Lower Grade Glioma_LGG_TCGA-RY-A845-01A-11R-A36H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
COLO 857	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.01596
G111	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02431
Pharynx	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Brain Lower Grade Glioma_LGG_TCGA-DU-8166-01A-11R-2256-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC6961462-NIHMS1544104-supplement-Sup_Tab.xlsx-Sup_Table_3_a-Supplementary_Table_3_Genes_Regulated_by_A_MYB_in_Humans_and_Macaques_Bold_genes_with_reduced_expression_in_Group_3_MYB	Rummagene Transcription Factor Associations 2026	1.0	null
GSE77108_0_v_9_saha_human	RummaGEO Drug Perturbation Signatures	1.0	null
XRCC5	Pathway Commons Protein-Protein Interactions	1.0	null
LPS853	DepMap CRISPR Gene Dependency	1.0	2.93093
hsa-miR-3202	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
JUND	ENCODE Transcription Factor Targets	1.0	null
HCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08053
KRT10	Pathway Commons Protein-Protein Interactions	1.0	null
whole body	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.050021
PMC8709578-elife-69843-supp2.xlsx-HSF1_KO_2_Ctr-Nearest_Ensembl_HSF1	Rummagene Transcription Factor Associations 2026	1.0	null
HEC-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H2342	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HSPA8	Pathway Commons Protein-Protein Interactions	1.0	null
ABC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.885998
Neck	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
hsa-miR-3692	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
BHLHE40_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DETROIT 562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.07344
HCC827GR5	DepMap CRISPR Gene Dependency	1.0	2.20499
EVSA-T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.20935
EGR4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	159.646
KLF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	81.644
SW 837	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21062
Prostate adenocarcinoma_PRAD_TCGA-2A-A8VL-01A-21R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
malignant glioma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.547032
SOX2-19829295-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Lung adenocarcinoma_LUAD_TCGA-69-8255-01A-11R-2287-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HES2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	106.544
GSE131649_6_v_3_hemin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
H3K9me3_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
GSE244730_0_v_1_erlotinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
TT cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.602
A375SKINCJ2	DepMap CRISPR Gene Dependency	1.0	2.87219
PAX5_GM12878_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PDIA5	Pathway Commons Protein-Protein Interactions	1.0	null
KPL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26873
CBX3_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Sarcoma_SARC_TCGA-SI-A71Q-01A-12R-A33J-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H522	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.910388
A4-FUK	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GSE184087_2_v_3_tert_human	RummaGEO Gene Perturbation Signatures	-1.0	null
496100575_PCx_no dementia_no TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.60477
GSE216043_11_v_6_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
HDAC1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TWIST1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.7832
MTF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.5297
RPS10	Pathway Commons Protein-Protein Interactions	1.0	null
hsa-miR-4792	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
SNU1196	DepMap CRISPR Gene Dependency	1.0	3.20646
KMS34	DepMap CRISPR Gene Dependency	1.0	3.14727
Shelterin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.081
NDUFA9	Pathway Commons Protein-Protein Interactions	1.0	null
PA-TU-8988T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.827734
Uterine Carcinosarcoma_UCS_TCGA-N5-A4RO-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE161302,GSE161304_1_v_0_enzalutamide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
ZNF547	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.3776
SU-DHL-6	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.73709
NCIH2009	DepMap CRISPR Gene Dependency	1.0	2.83029
FTC-133	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PSN1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-60-2703-01A-11R-2045-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H1944	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GSE166920_6_v_5_adalimumab_human	RummaGEO Drug Perturbation Signatures	1.0	null
SEPTIN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51326
MOLM6	CCLE Cell Line Gene CNV Profiles	1.0	2.45977
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02505
PMC9643473-Table1.xls-MAF_0_005-Gene_refGeneWithVer_MAF	Rummagene Transcription Factor Associations 2026	1.0	null
Temporal lobe	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
SNU503	DepMap CRISPR Gene Dependency	1.0	2.44966
GSE115395_2_v_3_enzalutamide_human	RummaGEO Drug Perturbation Signatures	1.0	null
H3K9me3_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
CAPAN-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08053
ALDH3A2	Pathway Commons Protein-Protein Interactions	1.0	null
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
NCI-H2810	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03363
PBX3	ENCODE Transcription Factor Targets	1.0	null
hsa-miR-4772-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
HCC1954	CCLE Cell Line Gene CNV Profiles	-1.0	-1.71089
HSPB1	Pathway Commons Protein-Protein Interactions	1.0	null
EPAS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	128.106
HUCCT1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GSE223893_2_v_10_setd2_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-P4-A5E8-01A-11R-A28H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Adrenocortical carcinoma_ACC_TCGA-OR-A5JV-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-6022-01A-21R-1686-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
USF1	JASPAR Predicted Transcription Factor Targets	1.0	null
2313287	DepMap CRISPR Gene Dependency	1.0	2.28863
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2GB-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SIX5	ENCODE Transcription Factor Targets	1.0	null
OVKATE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.64121
KP3	CCLE Cell Line Gene CNV Profiles	-1.0	-2.24639
KMS20	DepMap CRISPR Gene Dependency	1.0	2.15611
Liver hepatocellular carcinoma_LIHC_TCGA-CC-A8HV-01A-11R-A36F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
AU565	DepMap CRISPR Gene Dependency	1.0	2.00175
NCI-H28	COSMIC Cell Line Gene Mutation Profiles	1.0	null
WIDR	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.979904
Pheochromocytoma and Paraganglioma_PCPG_TCGA-WB-A820-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NB13	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HN	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36873
Prostate adenocarcinoma_PRAD_TCGA-EJ-7781-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PCNA	Pathway Commons Protein-Protein Interactions	1.0	null
SNU620	DepMap CRISPR Gene Dependency	1.0	2.73759
Viscus	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.033
Vagina	GTEx Tissue Gene Expression Profiles 2023	1.0	2.94499
U251MGDM	DepMap CRISPR Gene Dependency	1.0	2.10943
UMUC9	DepMap CRISPR Gene Dependency	1.0	2.25591
C32TG	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.873641
glia	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.066886
BJAB	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.78382
Kidney renal papillary cell carcinoma_KIRP_TCGA-A4-7915-01A-11R-2204-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H2110	COSMIC Cell Line Gene Mutation Profiles	1.0	null
FOSL2_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
UBAC2	Pathway Commons Protein-Protein Interactions	1.0	null
LAMTOR1	Pathway Commons Protein-Protein Interactions	1.0	null
PGM3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.84771
GSE115395_2_v_4_enzalutamide_human	RummaGEO Drug Perturbation Signatures	1.0	null
Brain stem	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
KYM1	CCLE Cell Line Gene CNV Profiles	1.0	1.48506
Natural killer cell	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.033
intracellular membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2975-03A-01T-0734-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC5059470-ncomms12992-s6.xlsx-CRS-NOCRS-Supplementary_Data_5_Integration_Frequency_in_cirrhotic_CRS_and_non-cirrhotic_no-CRS_Tumor_Samples_TWIST1	Rummagene Transcription Factor Associations 2026	1.0	null
NRF1	JASPAR Predicted Transcription Factor Targets	1.0	null
HS944T	DepMap CRISPR Gene Dependency	1.0	2.00922
MAX::MYC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1429
Lung squamous cell carcinoma_LUSC_TCGA-60-2726-01A-01R-0851-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NEUROD1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.4194
Parathyroid gland benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.066
SW 1463	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.17481
496100408_PCx_no dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.41842
H513	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCIH2029	CCLE Cell Line Gene CNV Profiles	1.0	1.40764
PMC12616242-can-24-3452_supplementary_table_s2_suppst2.xlsx-Up_bins-Up_bins_gaining_H3K27me3_in_hpMSC-EWSR1_FLI1_FLI1	Rummagene Transcription Factor Associations 2026	1.0	null
HES5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	92.4674
SAT	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GSE160817_4_v_1_slamf6_human	RummaGEO Gene Perturbation Signatures	-1.0	null
FADU	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.82702
NR1I2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.61598
ZNF213	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	109.394
GSE130401_1_v_0_trametinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE135514_2_v_6_dasatinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
NEUROG1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.627
FOXC1	JASPAR Predicted Transcription Factor Targets	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-KU-A66S-01A-21R-A30B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NOLC1	Pathway Commons Protein-Protein Interactions	1.0	null
Bladder exstrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.02
K2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.215
TC-71	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PANC 03.27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.977988
thyroid	GTEx Tissue Gene Expression Profiles	-1.0	-1.21091
NFKB2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.993
MYH9	Pathway Commons Protein-Protein Interactions	1.0	null
TE14	CCLE Cell Line Gene CNV Profiles	1.0	1.86421
H3K9me3_endothelial cell of umbilical vein_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
HCC2450	DepMap CRISPR Gene Dependency	1.0	2.14197
GRHL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.7035
UTRN	Pathway Commons Protein-Protein Interactions	1.0	null
ARNT2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.1219
HS 294T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.78285
NUCKS1	Pathway Commons Protein-Protein Interactions	1.0	null
H3K9me3_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
SNAI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.5316
ZBTB11	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.2363
MXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.7458
small intestine	GTEx Tissue Gene Expression Profiles	1.0	0.833802
Prostate adenocarcinoma_PRAD_TCGA-HC-7748-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Subtelomeric heterochromatin	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.056
SW1271	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MCAS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12273
Adrenocortical carcinoma_ACC_TCGA-PA-A5YG-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HCT-116	COSMIC Cell Line Gene Mutation Profiles	1.0	null
COMMD9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.87341
TEAD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.5181
DETROIT562	CCLE Cell Line Gene CNV Profiles	1.0	1.99602
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
COV318	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.53205
KMRC2	DepMap CRISPR Gene Dependency	1.0	2.33325
Heart cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.3
H3K9me3_Neurosphere Cultured Cells Ganglionic Eminence Derived	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
RERF-LC-FM	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-EJ-5522-01A-01R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NEUROG2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.6886
SCCOHT1	DepMap CRISPR Gene Dependency	1.0	2.22939
KU812	COSMIC Cell Line Gene Mutation Profiles	1.0	null
TTC442	DepMap CRISPR Gene Dependency	1.0	2.02118
TCF3	ENCODE Transcription Factor Targets	1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-H6-A45N-11A-12R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HEY1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	91.335
H-EMC-SS	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ICC137	DepMap CRISPR Gene Dependency	1.0	2.19715
Skin Cutaneous Melanoma_SKCM_TCGA-BF-A3DM-01A-11R-A20F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H292	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.88623
KMS-26	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26948
membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
TP53BP1_KD_GSE54268_670_human_MCF-10A	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
Amylin receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.62
Rectum adenocarcinoma_READ_TCGA-G5-6572-01A-11R-1830-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PF-382	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PMC3419980-leu201249x2.xls-RUNX1-ETO_siRE_ChIPSeq_peaks_ge-gene_name_RUNX1	Rummagene Transcription Factor Associations 2026	1.0	null
Eht	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.533
ATP5J2	Pathway Commons Protein-Protein Interactions	1.0	null
EB2	CCLE Cell Line Gene CNV Profiles	-1.0	-2.59447
CA922	DepMap CRISPR Gene Dependency	1.0	2.96427
B-50 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.677
ONDA7	DepMap CRISPR Gene Dependency	1.0	2.08372
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.979904
Prostate adenocarcinoma_PRAD_TCGA-HC-7211-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HCC1569	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.977988
Prostate adenocarcinoma_PRAD_TCGA-EJ-8468-01A-21R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RUVBL2	Pathway Commons Protein-Protein Interactions	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-18-4083-01A-01R-1100-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-56-A49D-01A-11R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
animal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.050021
GSE62974_1_v_0_epas1_human	RummaGEO Gene Perturbation Signatures	1.0	null
496100324_FWM_no dementia_TBI_79_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.29941
Lung adenocarcinoma_LUAD_TCGA-NJ-A55R-01A-11R-A262-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TCFL5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	113.629
Lymphocyte	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.033
M059K	DepMap CRISPR Gene Dependency	1.0	2.52676
PMC10834420-12276_2023_1140_MOESM2_ESM.xls-ST12-Unnamed_5_KLF6	Rummagene Transcription Factor Associations 2026	1.0	null
COLO 829	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08495
A172	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.31076
PANC-03-27	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H1650	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.7119
CCK81	CCLE Cell Line Gene CNV Profiles	1.0	1.38204
JUND_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
LOVO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.10889
HAND2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.6691
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.888027
Liver hepatocellular carcinoma_LIHC_TCGA-BC-A216-01A-11R-A155-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
COV362	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22166
GSE165334_2_v_0_dabrafenib_human	RummaGEO Drug Perturbation Signatures	1.0	null
NCIH209	CCLE Cell Line Gene CNV Profiles	-1.0	-1.4066
VDR-20736230-LYMPHOBLASTOID-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
TAF2-19829295-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
HUH1	DepMap CRISPR Gene Dependency	1.0	3.04159
KYSE-520	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.41504
MKN-74	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.69532
KU812	CCLE Cell Line Gene CNV Profiles	-1.0	-1.62711
JK1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.78016
42MGBA	DepMap CRISPR Gene Dependency	1.0	2.22348
central nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053061
496100331_TCx_probable Alzheimer's disease_TBI_100+_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.84436
CCK-81	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NPrEC cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.818
MRPL44	Pathway Commons Protein-Protein Interactions	1.0	null
GRHL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.8666
KMS-28BM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.40416
NCIH2171	DepMap CRISPR Gene Dependency	1.0	2.1242
496100290_PCx_no dementia_TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.44155
IMPDH2	Pathway Commons Protein-Protein Interactions	1.0	null
GTL-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.934682
ZSCAN4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.4236
TC106	DepMap CRISPR Gene Dependency	1.0	3.13458
496100399_PCx_no dementia_no TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.22743
MTDH	Pathway Commons Protein-Protein Interactions	1.0	null
NUGC2	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
H3K9me3_fibroblast of lung_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
HT-55	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.35743
SCC25	CCLE Cell Line Gene CNV Profiles	1.0	1.73962
Medullary thyroid carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.585
Leukocyte	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.033
Head and Neck squamous cell carcinoma_HNSC_TCGA-IQ-A61I-01A-11R-A30B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HCC60	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.22459
Bladder Urothelial Carcinoma_BLCA_TCGA-KQ-A41O-01A-12R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
YD15	CCLE Cell Line Gene CNV Profiles	1.0	2.85035
HCC1954	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.7119
VMRC-LCD	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.969425
HSPA1B	Pathway Commons Protein-Protein Interactions	1.0	null
SLC9A3R1	Pathway Commons Protein-Protein Interactions	1.0	null
EKVX	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.17968
MZ1-PC	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ITFG3	Pathway Commons Protein-Protein Interactions	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A115-01A-11R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
LN319	DepMap CRISPR Gene Dependency	1.0	3.19241
TUBA1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.92201
Rectum adenocarcinoma_READ_TCGA-AG-3902-01A-01R-A32Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ASCL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	69.1009
HEY2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.2759
HBL-100	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.930938
POLR2A_A549_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PMC2566525__F8	PFOCR Pathway Figure Associations 2024	1.0	null
hsa-miR-4691-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
SUPT1	DepMap CRISPR Gene Dependency	1.0	2.13667
YKG1	DepMap CRISPR Gene Dependency	1.0	2.29687
CTBP1-25329375-LNCAP-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
CREB3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.2272
GI1	DepMap CRISPR Gene Dependency	1.0	2.1836
PANC0813	CCLE Cell Line Gene CNV Profiles	1.0	1.53288
HDAC2_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTBP2-25329375-LNCAP-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Lung adenocarcinoma_LUAD_TCGA-93-A4JQ-01A-11R-A24X-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CAL-62	COSMIC Cell Line Gene Mutation Profiles	1.0	null
496100421_PCx_probable Alzheimer's disease_TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	6.07257
CLOCK	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.9464
H3K9me3_Peripheral Blood Mononuclear Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Amylin receptor complex 1	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.709
496100534_FWM_probable Alzheimer's disease_no TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.61195
GSE186280_1_v_0_sorafenib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
TN2	DepMap CRISPR Gene Dependency	1.0	2.2008
NCIH1975	CCLE Cell Line Gene CNV Profiles	1.0	2.0015
RERFGC1B	CCLE Cell Line Gene CNV Profiles	-1.0	-1.48077
EFO27	DepMap CRISPR Gene Dependency	1.0	2.76119
NCI-N87	COSMIC Cell Line Gene Mutation Profiles	1.0	null
TOP2B-26459242-MCF-7-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
NO-10	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SW1088	DepMap CRISPR Gene Dependency	1.0	2.39256
Bladder Urothelial Carcinoma_BLCA_TCGA-K4-A3WV-01A-11R-A22U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
OVSAHO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.79114
SMAD3-21741376-EPCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-VS-A94W-01A-12R-A37O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
pg4	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.771
GSE115395_2_v_5_enzalutamide_human	RummaGEO Drug Perturbation Signatures	1.0	null
horsetail-astral microtubule array	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.591
NCI-H1915	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.68351
Upstream stimulatory factor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.912
NCIH929	CCLE Cell Line Gene CNV Profiles	-1.0	-1.84958
SLC16A1	Pathway Commons Protein-Protein Interactions	1.0	null
496100532_FWM_no dementia_no TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.03235
Lung adenocarcinoma_LUAD_TCGA-55-8620-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HO-1-N-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-FF-A7CQ-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H1838	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.7119
MKN7	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SMAD3-21741376-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Blood	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.033
Bladder Urothelial Carcinoma_BLCA_TCGA-GU-A42P-01A-11R-A23W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-FW-A3I3-06A-11R-A21D-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-1238	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
SDF4	Pathway Commons Protein-Protein Interactions	1.0	null
U-251MG cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.002
HCC1263	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08053
PMC8046804-41467_2021_22478_MOESM11_ESM.xlsx-Del_AA-TCGA-Unnamed_26_TEAD1	Rummagene Transcription Factor Associations 2026	1.0	null
FLOT2	Pathway Commons Protein-Protein Interactions	1.0	null
Thyroid gland	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
EGR2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	165.496
GSE242290_1_v_0_glutathione_human	RummaGEO Drug Perturbation Signatures	1.0	null
EB-3	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H889	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.3364
DNAJB12	Pathway Commons Protein-Protein Interactions	1.0	null
BHLHE41	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.9756
496100516_FWM_probable Alzheimer's disease_TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.49638
FIGLA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.8081
prostate	GTEx Tissue Gene Expression Profiles	1.0	2.18987
Hematopoietic cell	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.033
TE-441-T	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MKN45	COSMIC Cell Line Gene Mutation Profiles	1.0	null
496100471_HIP_no dementia_no TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.27598
UMUC3	DepMap CRISPR Gene Dependency	1.0	2.70339
EFO21	CCLE Cell Line Gene CNV Profiles	-1.0	-1.37372
SIX5_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.979562
GP5D	COSMIC Cell Line Gene Mutation Profiles	1.0	null
EPLC272H	CCLE Cell Line Gene CNV Profiles	1.0	1.33703
VDAC2	Pathway Commons Protein-Protein Interactions	1.0	null
NCI-H187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.888027
COR-L88	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.12733
ARNT::HIF1A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.4423
PAX5	ENCODE Transcription Factor Targets	1.0	null
U251MG	DepMap CRISPR Gene Dependency	1.0	2.71211
FARAGE	DepMap CRISPR Gene Dependency	1.0	2.45193
Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A6GY-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DMS-273	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A4NR-01A-11R-A311-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PECAPJ34CLONEC12	CCLE Cell Line Gene CNV Profiles	1.0	1.64735
Lung adenocarcinoma_LUAD_TCGA-38-4630-01A-01R-1206-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-EJ-7331-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC6347838-13046_2019_1042_MOESM3_ESM.xls-PRDM16_group_peak_anno-Gene_PRDM16	Rummagene Transcription Factor Associations 2026	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-WB-A81E-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-J9-A8CN-01A-11R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KLF9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	61.7955
SK-MEL-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23783
Lung adenocarcinoma_LUAD_TCGA-91-6840-01A-11R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
glial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.067308
REST	ENCODE Transcription Factor Targets	1.0	null
SNAI3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.3615
BACH1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.79532
NFIC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	85.4051
Brain Lower Grade Glioma_LGG_TCGA-HT-7875-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
496100493_TCx_no dementia_no TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.31692
NCI-H2023	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HS 936.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.977988
GCM2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.0915
SKCO1	CCLE Cell Line Gene CNV Profiles	1.0	1.81621
SRSF11	Pathway Commons Protein-Protein Interactions	1.0	null
ER-23166858-MCF-7-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
GSE150895,GSE150896_0_v_1_kif15_human	RummaGEO Gene Perturbation Signatures	-1.0	null
RKO	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MTHFD1	Pathway Commons Protein-Protein Interactions	1.0	null
REST_Panc1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H1869	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00203
YMB1	CCLE Cell Line Gene CNV Profiles	1.0	1.5401
PANC 08.13	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.81287
PBX3_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Bronchoalveolar system	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
NCI-H2461	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02064
EJM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13078
H3K9me3_fibroblast of lung_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-VP-A878-01A-31R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Mesothelioma_MESO_TCGA-TS-A7P8-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TE8	CCLE Cell Line Gene CNV Profiles	-1.0	-2.22907
SMAD2/3-21741376-EPCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Sarcoma_SARC_TCGA-X9-A971-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
LC-2-AD	COSMIC Cell Line Gene Mutation Profiles	1.0	null
FOXA1_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HIF1A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.4929
Mesothelioma_MESO_TCGA-SC-A6LQ-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
laminin-1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.039
TCF3/E2A-22897851-JUKARTE6-1-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
HS746T	CCLE Cell Line Gene CNV Profiles	-1.0	-1.52576
Parathyroid adenoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.066
Lung adenocarcinoma_LUAD_TCGA-78-8640-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Primary spermatocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.175
NDUFB4	Pathway Commons Protein-Protein Interactions	1.0	null
PMC6187090-mmc1.xlsx-TP53_positive-Symbol_TP53	Rummagene Transcription Factor Associations 2026	1.0	null
OV-7	COSMIC Cell Line Gene Mutation Profiles	1.0	null
H3K9me3_H1-hESC_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
GSE242290_1_v_10_glutathione_human	RummaGEO Drug Perturbation Signatures	1.0	null
GCIY	CCLE Cell Line Gene CNV Profiles	-1.0	-1.49385
PC14	CCLE Cell Line Gene CNV Profiles	-1.0	-1.41431
REL	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.2941
NCI-H1975	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26917
LMNA	Pathway Commons Protein-Protein Interactions	1.0	null
NCI-H446	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.874467
SOHLH2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	101.428
Pancreatic adenocarcinoma_PAAD_TCGA-US-A77J-01A-11R-A32O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE232624_4_v_5_ethanol_human	RummaGEO Drug Perturbation Signatures	-1.0	null
EEF1A1	Pathway Commons Protein-Protein Interactions	1.0	null
ZBTB14	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	80.954
LONP1	Pathway Commons Protein-Protein Interactions	1.0	null
adult retina	HPM Cell Type and Tissue Protein Expression Profiles	1.0	1.14787
USF2	JASPAR Predicted Transcription Factor Targets	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-WW-A8ZI-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K27me3_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCIH2110	CCLE Cell Line Gene CNV Profiles	-1.0	-2.14498
TCF4	ChEA Transcription Factor Targets	1.0	null
EGR1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	141.98
Telomere cap complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.048
HT-29	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.980632
MOGGUVW	CCLE Cell Line Gene CNV Profiles	1.0	1.78201
CAL62	CCLE Cell Line Gene CNV Profiles	-1.0	-1.95919
ARL1	Pathway Commons Protein-Protein Interactions	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-56-8626-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC11426526-ppat.1012555.s014.xlsx-DEG_DC_C91-PL_LPS_vs_DC_Jurkat-Unnamed_5_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
H3K9me3_fibroblast of lung_hg19_3	ENCODE Histone Modification Site Profiles	1.0	null
CDK5RAP3	Pathway Commons Protein-Protein Interactions	1.0	null
ARMC10	Pathway Commons Protein-Protein Interactions	1.0	null
TCF3_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MFM223	DepMap CRISPR Gene Dependency	1.0	3.04361
ELK4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.2696
HN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08422
Ankyrin repeat-containing domain	InterPro Predicted Protein Domain Annotations	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-TT-A6YP-01A-21R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HIST1H2AI	Pathway Commons Protein-Protein Interactions	1.0	null
IRAK2	Pathway Commons Protein-Protein Interactions	1.0	null
PMC5564849__F5	PFOCR Pathway Figure Associations 2023	1.0	null
PMC9643473-Table1.xls-MAF_0_005-Gene_refGenecanonical_MAF	Rummagene Transcription Factor Associations 2026	1.0	null
496100567_PCx_no dementia_TBI_87_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.11145
ZMPSTE24	Pathway Commons Protein-Protein Interactions	1.0	null
TCF4-23295773-U87-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-DK-A1A7-01A-11R-A13Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Glioma	DisGeNET Gene-Disease Associations	1.0	null
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16395
MS751	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.33119
NCIH2087	DepMap CRISPR Gene Dependency	1.0	2.20497
Cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.22
Pheochromocytoma and Paraganglioma_PCPG_TCGA-QT-A5XP-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HES6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	55.1112
OAW42	CCLE Cell Line Gene CNV Profiles	1.0	1.79271
HDAC1	ENCODE Transcription Factor Targets	1.0	null
HMC18	DepMap CRISPR Gene Dependency	1.0	2.98753
EFM-192A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.980632
HCC1011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.98649
MHH-PREB-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.45165
ZFP57	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	68.2521
TFEC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.4295
KG1C	CCLE Cell Line Gene CNV Profiles	-1.0	-1.90342
CREM	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.418
COLO-678	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HS746T	DepMap CRISPR Gene Dependency	1.0	2.38015
Null cell	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.033
MNT	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.8517
hsa-miR-3074-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
Sarcoma_SARC_TCGA-QQ-A5VC-01A-31R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
RERF-LC-KJ	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.39353
PMC2566525__F8	PFOCR Pathway Figure Associations 2023	1.0	null
Trunk	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Pancreatic adenocarcinoma_PAAD_TCGA-2L-AAQL-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CR-7398-01A-11R-2016-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
496100504_TCx_probable Alzheimer's disease_TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.39739
CAL-148	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.83526
HCC2279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.86058
KLF5-25053715-YYC3-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
NCI-H2228	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.43888
NCI-H1648	COSMIC Cell Line Gene Mutation Profiles	1.0	null
RAP2B	Pathway Commons Protein-Protein Interactions	1.0	null
hsa-miR-149	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
G-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.977988
NCI-H1688	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NFKB1	JASPAR Predicted Transcription Factor Targets	1.0	null
TM9SF1	Pathway Commons Protein-Protein Interactions	1.0	null
ZNF140	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	51.2201
H3K9me3_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
YD15	DepMap CRISPR Gene Dependency	1.0	2.14981
PK-45P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2611
PA-TU-8988S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08053
496100374_HIP_possible Alzheimer's disease_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.33917
Nasopharynx	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
RI1	DepMap CRISPR Gene Dependency	1.0	2.37966
GSE77108_8_v_9_saha_human	RummaGEO Drug Perturbation Signatures	1.0	null
MOLP8	CCLE Cell Line Gene CNV Profiles	-1.0	-1.45765
FOSL2	ENCODE Transcription Factor Targets	1.0	null
T3M4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.60205
KBTBD3	Pathway Commons Protein-Protein Interactions	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-J4-A83I-01A-11R-A36G-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE131649_6_v_0_hemin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
SSR4	Pathway Commons Protein-Protein Interactions	1.0	null
PRDM14-20953172-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
TK-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.867321
Bb	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.851
Disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.145
Liver hepatocellular carcinoma_LIHC_TCGA-G3-A7M9-01A-23R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF274-21170338-K562-HELA	ChEA Transcription Factor Targets 2022	1.0	null
NCIH1650	CCLE Cell Line Gene CNV Profiles	-1.0	-1.67453
FECH	Pathway Commons Protein-Protein Interactions	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A3MV-06A-11R-A21D-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-B3-4104-01A-02R-1351-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RERF-LC-MS	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-2A-A8VT-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MRPS25	Pathway Commons Protein-Protein Interactions	1.0	null
GSE214725_1_v_0_ibrutinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-90-A4ED-01A-31R-A24Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H650	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.06511
NCI-H727	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.47574
GSE180468_1_v_0_arid1a_human	RummaGEO Gene Perturbation Signatures	-1.0	null
disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.039179
ZNF136	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.0912
UBC	Pathway Commons Protein-Protein Interactions	1.0	null
EPLC-272H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.931689
Lateral ventricle	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-HM-A6W2-01A-21R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Heart sarcoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.674
MDAMB468	DepMap CRISPR Gene Dependency	1.0	3.2729
A375	DepMap CRISPR Gene Dependency	1.0	2.01659
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4642-01B-01R-1305-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NZM3	DepMap CRISPR Gene Dependency	1.0	2.35858
NCIH2227	CCLE Cell Line Gene CNV Profiles	1.0	1.73784
IST-SL2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
RPL30	Pathway Commons Protein-Protein Interactions	1.0	null
MME	Pathway Commons Protein-Protein Interactions	1.0	null
HES1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.5694
DU 145	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.55907
DDX27	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.76455
CLEC4M	Pathway Commons Protein-Protein Interactions	1.0	null
NNT	Pathway Commons Protein-Protein Interactions	1.0	null
ECC12	COSMIC Cell Line Gene Mutation Profiles	1.0	null
496100378_TCx_probable Alzheimer's disease_TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.25243
CPSF6	Pathway Commons Protein-Protein Interactions	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-D9-A4Z3-01A-11R-A266-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
nucleus	LOCATE Predicted Protein Localization Annotations	1.0	null
spinal cord	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.062677
JOPACA1	DepMap CRISPR Gene Dependency	1.0	2.5552
TK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.888027
BCPAP	DepMap CRISPR Gene Dependency	1.0	2.75591
OV-90	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.593
HCC-15	COSMIC Cell Line Gene Mutation Profiles	1.0	null
COLO 699	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.934682
nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052165
NB4	DepMap CRISPR Gene Dependency	1.0	2.41254
EHEB	COSMIC Cell Line Gene Mutation Profiles	1.0	null
H3K27me3_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Brain ventricle	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Acute Myeloid Leukemia_LAML_TCGA-AB-2857-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF274-21170338-K562_HELA_HEPG2_GM12878-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
Metencephalon	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
CAS-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
OCT1-27270436-CHIP-SEQ-PROSTATE-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-IR-A3LA-01A-11R-A22U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HCC1319	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.41372
TP53	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	50.1951
EGR3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	173.041
95T1000	DepMap CRISPR Gene Dependency	1.0	3.00042
NCI-H1435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.33005
GSE155162,GSE155169_1_v_2_buparlisib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
HSC-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
S117	DepMap CRISPR Gene Dependency	1.0	2.6955
efo21	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.049
glioma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.826523
TCF4-23295773-U87-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
PCI-38	COSMIC Cell Line Gene Mutation Profiles	1.0	null
496100338_HIP_probable Alzheimer's disease_no TBI_79_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.10702
Brain Lower Grade Glioma_LGG_TCGA-DU-A7TG-01A-21R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
muscle	GTEx Tissue Gene Expression Profiles	-1.0	-0.835212
Pancreatic adenocarcinoma_PAAD_TCGA-3A-A9I9-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TUBB8	Pathway Commons Protein-Protein Interactions	1.0	null
OCIAML2	DepMap CRISPR Gene Dependency	1.0	2.17297
BHLHE40	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	102.581
Pharyngeal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.485
SNU638	DepMap CRISPR Gene Dependency	1.0	3.17294
COV504	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08053
FAAH	Pathway Commons Protein-Protein Interactions	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-A49A-01A-11R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
kidney	GTEx Tissue Gene Expression Profiles	-1.0	-1.67856
MAX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.2307
intracellular organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
H3K9me3_H1	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
LN319	CCLE Cell Line Gene CNV Profiles	1.0	1.57801
KYSE-140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13078
GSU	DepMap CRISPR Gene Dependency	1.0	2.30744
NCI-H128	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Sarcoma_SARC_TCGA-MO-A47R-01A-11R-A24X-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MYCN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	48.1982
Lung squamous cell carcinoma_LUSC_TCGA-63-A5MW-01A-11R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H820	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.842218
INPP5D	Pathway Commons Protein-Protein Interactions	1.0	null
CBX3	ENCODE Transcription Factor Targets	1.0	null
NCI-H1993	COSMIC Cell Line Gene Mutation Profiles	1.0	null
OCI-M1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.72059
MAX	JASPAR Predicted Transcription Factor Targets	1.0	null
NDUFA10	Pathway Commons Protein-Protein Interactions	1.0	null
SW626	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Kidney Chromophobe_KICH_TCGA-KO-8404-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RELA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	48.3333
ZEB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.4118
MRVI1	Pathway Commons Protein-Protein Interactions	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-K4-A3WU-01B-11R-A23N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE175787_4_v_2_rhoc_human	RummaGEO Gene Perturbation Signatures	1.0	null
GSS	DepMap CRISPR Gene Dependency	1.0	2.42405
hsa-miR-760	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
GSE130401_6_v_0_trametinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
PAX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.6116
H3K9me3_Neurosphere Cultured Cells Cortex Derived	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
BV-173	COSMIC Cell Line Gene Mutation Profiles	1.0	null
RPS23	Pathway Commons Protein-Protein Interactions	1.0	null
hsa-miR-3670	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
GSE217541,GSE217543_3_v_2_tet1_human	RummaGEO Gene Perturbation Signatures	1.0	null
SNGM	CCLE Cell Line Gene CNV Profiles	-1.0	-1.54751
Hippocampus	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
HC-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HCC364	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.40416
Head and Neck squamous cell carcinoma_HNSC_TCGA-RS-A6TO-01A-32R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K9me3_keratinocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
NCIH28	DepMap CRISPR Gene Dependency	1.0	2.39031
GSE117212,GSE117214_0_v_1_zbtb1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
SKGII	DepMap CRISPR Gene Dependency	1.0	2.40104
FOXA1	ENCODE Transcription Factor Targets	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-HC-7080-01A-11R-1965-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
VAL	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Ankyrin repeat	InterPro Predicted Protein Domain Annotations	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-EJ-A65F-01A-21R-A311-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
LNZ308	DepMap CRISPR Gene Dependency	1.0	2.67041
COLO-818	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.47574
tissues, cell types and enzyme sources	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.049989
Parathyroid carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.241
GSE150895,GSE150896_0_v_1_enzalutamide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
COLO 320DM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.911458
ATP12A	Pathway Commons Protein-Protein Interactions	1.0	null