association	dataset	threshold value	standardized value
E2F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.1396
CRCGN009_HEPG2_24H:D11	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	7.5178
DLX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.0348
PK-45P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.19756
SHOX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.5133
MEWO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.93058
SOX12	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7855
TBX15	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.8674
TBXT	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.1998
GLI3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.5575
CRCGN009_HEPG2_24H:K01	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.36843
CEBPG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.4383
CRCGN016_MCF10A.TP53.M_24H:I20	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.03165
TBX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.0643
ZNF784	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.4235
GATA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.329
membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
CRCGN016_MCF10A.TP53.M_24H:O20	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.205
DLX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.7114
CRCGN016_MCF10A.TP53.M_24H:P12	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.60169
MSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.09
496100391_FWM_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.05485
FOS::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.2104
NR4A2::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.304
496100419_TCx_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	6.2405
NCI-H28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.1113
EPLC-272H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.946839
Synaptic vesicle protein transport vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.158
UNCX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.8768
TBX19	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.9246
OCI-LY-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.946839
BACH1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.6581
HCC38	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03746
CRCGN015_MCF10A_48H:M16	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	7.5902
BACH2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	66.211
SK-MEL-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.38782
TFE3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.0118
496100458_FWM_no dementia_no TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.02057
SMAD5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.7928
PKNOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.3827
SREBF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	49.5591
chromosome, subtelomeric region	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.917
FLI1::DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.8328
ALX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.0035
PITX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.0959
MTF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.421
SOX15	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.073
RMG-I	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.30865
DPRX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.0695
DUX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.6277
NCI-N417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.21868
Extraocular muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.821
FIGLA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.7583
MEF2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.9714
USF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.2766
CRCGN017_MCF10A.WT.HP_24H:K22	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.7217
FOSL2::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.8553
NR2C1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.751
TCF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.1889
CRCGN009_HEPG2_24H:K13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.75074
ESR2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.5453
cullin-RING ubiquitin ligase complex	GO Cellular Component Annotations 2025	1.0	null
XBP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.8541
ESRRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.0099
Cul2-RING ubiquitin ligase complex	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	3.0
BT-483	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.44389
ZFP14	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	57.832
proteasome-mediated ubiquitin-dependent protein catabolic process	GO Biological Process Annotations 2025	1.0	null
ZBTB18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.4336
FOSL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.2898
PAX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.8837
CRCGN012_HEPG2_24H:L03	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.79855
SK-MEL-28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.876472
SK-CO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.24154
TEAD4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.0779
HESX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1871
ZNF416	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.887
RNA polymerase II transcription repressor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.732
K-562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12035
GSE240386,GSE242143_8_v_4_morc2_human	RummaGEO Gene Perturbation Signatures	1.0	null
intracellular membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
NCI-H1048	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.67973
DMS 79	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.866619
USF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.1785
CRCGN014_HEPG2_24H:D01	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.91596
ARGFX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.2942
TWIST1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.8333
HCC2157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.32752
MEIS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	60.673
CDX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.0521
MEF2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.4775
RXRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.9805
NR2C2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	65.4409
NCI-H1355	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23325
TCF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.1404
CRCGN012_HEPG2_24H:N04	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	5.03035
CRCGN015_MCF10A.WT.HP_24H:O02	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.55011
THRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	152.923
OSR2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.5177
DUXA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	68.3521
CRCGN014_HEPG2_3H:N04	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	5.2061
NR2F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	73.8768
DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.1578
CRCGN017_MCF10A.WT.HP_24H:M07	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.73795
PROP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.567
G-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12035
U-698-M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4253
LBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.6504
FOSL2::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.9542
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
TBR1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.7277
MLX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.5635
GSE186647,GSE217288_2_v_4_hnrnpc_human	RummaGEO Gene Perturbation Signatures	-1.0	null
FOS::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.5699
CRCGN010_HEPG2_24H:K01	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.14745
496100460_TCx_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.46815
MHH-ES-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.30619
HEY2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.559
SMAD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.0802
CREB3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.0236
HOXD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.1797
CRCGN016_MCF10A.TP53.M_24H:O18	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.63407
LHX9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.9593
VSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.5527
VENTX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.8954
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
cullin-RING ubiquitin ligase complex	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	3.0
NCI-H2081	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.905599
EVX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.1691
NFYC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.0548
CRCGN010_HEPG2_24H:P03	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.24401
INA complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.772
CFPAC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.997679
SCLC-22H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.19301
EN1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.7468
GSE169356_0_v_5_ivermectin_human	RummaGEO Drug Perturbation Signatures	1.0	null
COPS4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.15546
E2F7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.9201
ZNF140	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.6049
CRCGN010_HEPG2_24H:H24	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.52725
CCRF-HSB-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.691
EOMES	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.071
ZNF524	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.2109
ZR-75-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0788
RXRA::VDR	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.7
HES6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.8645
MAFA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.6023
TBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.9181
ZNF317	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.5274
496100421_PCx_probable Alzheimer's disease_TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.14187
CRCGN016_MCF10A.TP53.M_24H:H10	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.48365
ZNF143	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.8623
CRCGN008_HEPG2_24H:H14	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.1163
PMC8120133-supplementarytables_ddab063.xlsx-Table_S2-Table_S2_Differentially_expressed_genes_in_DUX4-fl_and_DUX4-s_DUX4	Rummagene Transcription Factor Associations 2026	1.0	null
DCTN3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.02584
TBX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.4619
CRCGN015_MCF10A.TP53.M_24H:O23	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.19885
HAND2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.3729
CRCGN017_MCF10A.WT.HP_24H:C23	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.5984
FOXE1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	104.829
ZSCAN16	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.2028
TCF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.3639
PPARD	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.0416
SCLC-21H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.45215
BT-549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.934311
FOXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.7811
PBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.4451
LXF-289	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.905599
CRCGN011_HEPG2_24H:L13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.96305
PMC6961462-NIHMS1544104-supplement-Sup_Tab.xlsx-Sup_Table_3_a-Supplementary_Table_3_Genes_Regulated_by_A_MYB_in_Humans_and_Macaques_Bold_genes_with_reduced_expression_in_Group_3_MYB	Rummagene Transcription Factor Associations 2026	1.0	null
CRCGN009_HEPG2_24H:L03	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.70275
FOXB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.3255
ZNF135	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	68.5274
BCL11A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.3577
ubiquitin-dependent protein catabolic process	GO Biological Process Annotations 2025	1.0	null
DRM complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.75
CRCGN015_MCF10A.TP53.M_24H:O08	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.28495
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.34404
CRCGN016_MCF10A.TP53.M_24H:K05	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	8.3463
ERF::SREBF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.5853
COR-L88	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.88499
GSE218060_5_v_0_decitabine_human	RummaGEO Drug Perturbation Signatures	1.0	null
COV318	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18879
SCRT1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.5216
GSE186647,GSE217288_11_v_7_hnrnpc_human	RummaGEO Gene Perturbation Signatures	-1.0	null
FOSB::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.7579
ZNF384	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	170.206
KYSE-270	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26959
GSE186647,GSE217288_11_v_4_hnrnpc_human	RummaGEO Gene Perturbation Signatures	-1.0	null
FOSL1::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.8268
FOSL1::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.391
MYOD1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.9927
ZNF558	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	180.402
proteasomal protein catabolic process	GO Biological Process Annotations 2025	1.0	null
TP53	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.4092
TGIF2LY	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.7404
ARNT2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.6807
496100472_PCx_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.99917
MYF5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.0124
NCI-H209	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.78169
GSE240386,GSE242143_1_v_6_morc2_human	RummaGEO Gene Perturbation Signatures	1.0	null
SOX18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.0668
EVX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.2538
CRCGN015_MCF10A_48H:C24	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.17467
FEZF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	58.3057
A-498	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07815
ISX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.0277
CRCGN017_MCF10A.TP53.M_24H:O12	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.22158
TK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18055
SIX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.9534
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.905599
GSC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.7083
NKX2-5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.2037
CDX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.9802
NFIC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	66.0648
HOXA6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.8367
CRCGN017_MCF10A.WT.HP_24H:O14	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.10155
GSE186647,GSE217288_2_v_7_hnrnpc_human	RummaGEO Gene Perturbation Signatures	-1.0	null
ZNF410	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.1096
NFIC::TLX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	67.4375
CRCGN009_HEPG2_24H:L06	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.04431
HLF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.5662
496100416_FWM_dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.14401
KMS-28BM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.38782
CRCGN016_MCF10A.TP53.M_24H:P14	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.12664
GSE235066_7_v_0_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
MAF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.9234
CRCGN014_HEPG2_24H:D13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.92044
RAX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.3592
TOV-112D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-3.37867
HOXB4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.6446
MEIS3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.9344
NEUROG2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.8664
CRCGN010_HEPG2_24H:L03	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.1644
CRCGN011_HEPG2_24H:P16	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.01335
SUM 229PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.917242
BXPC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.847312
SNU-475	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.24705
JUN::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.6154
IRF5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.3021
ZNF354A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	54.4659
ZNF652	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.9247
RUNX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.6505
GSE133661_0_v_1_c19orf12_human	RummaGEO Gene Perturbation Signatures	1.0	null
LHX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.0437
CRCGN011_HEPG2_24H:N04	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	7.7675
MEF2D	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.0792
RXRG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.251
CRCGN015_MCF10A.TP53.M_24H:J07	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.435
FOSL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.9876
PBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.6667
PITX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.7897
KYSE-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.934311
GSE218060_7_v_0_decitabine_human	RummaGEO Drug Perturbation Signatures	1.0	null
VSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.6936
GBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.5153
MEOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.0003
ATF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.7391
TEAD1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.4784
BATF::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.4217
NOTO	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.8284
GSE240386,GSE242143_1_v_4_morc2_human	RummaGEO Gene Perturbation Signatures	1.0	null
HOXC13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.423
MAFG::NFE2L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.4231
CAL-148	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.72957
CRCGN015_MCF10A.TP53.M_24H:O21	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.2294
SNAI2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.1272
GRANTA-519	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.54401
BHLHE41	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.6621
NR2F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.25
TFAP4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	86.2775
TBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.0728
MSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.5506
CREB3L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.1936
MAFF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.1593
FOXC1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	64.1204
HOXA3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.7072
TCF12	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.9154
MYF6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.6926
CPC-N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.72957
MEF2C	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	61.9982
ZNF76	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.9138
NFIX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	61.5401
LMX1A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.4249
COR-L279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.12113
RARA::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.8261
CRCGN017_MCF10A.WT.HP_24H:I10	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.809
DMRTC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.3421
496100367_FWM_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.49714
PAX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.0897
NCI-H446	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.998669
TFEB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.5863
THRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	68.4725
ZNF680	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.7126
CRCGN015_MCF10A_48H:E21	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.05759
CRCGN015_MCF10A.TP53.M_24H:F17	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.6783
PPARA::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	49.7943
Myeloid cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.725
Trophectoderm	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.935
TUBA1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.92201
cytoplasmic part	LOCATE Predicted Protein Localization Annotations	1.0	null
496100459_PCx_no dementia_no TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.22586
GSE240386,GSE242143_8_v_6_morc2_human	RummaGEO Gene Perturbation Signatures	1.0	null
GSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.664
SCRT2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.7797
HCC630	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.848497
CRCGN014_HEPG2_24H:A07	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.45224
NCI-H510A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.62749
NFYB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.2149
HSF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.9365
RARA::RXRG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.6247
PAX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	57.3474
HNF4A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.9689
Cul2-RING ubiquitin ligase complex	GO Cellular Component Annotations 2025	1.0	null
CRCGN011_HEPG2_24H:P03	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.91435
PA-TU-8988S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03746
MGA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.6532
RKO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.97228
RHOXF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.521
SW 1573	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.1632
ZBTB17	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.5034
PANC 03.27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.905599
HOXA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.4189
HCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.934311
SOX21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.0571
MEOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.1044
NEUROG1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.2437
NCI-H1793	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.12045
FOXD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	125.753
NIH:OVCAR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.79087
RORB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.7519
TBX21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.6507
MSC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.5042
HOXB7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.7818
HSF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.2619
CRCGN016_MCF10A.WT.HP_24H:N15	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	5.82
ASCL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	78.1462
NKX6-1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.0029
PPARG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.9286
A172	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.24224
OTX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.1948
RORA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	56.4967
CRCGN012_HEPG2_24H:H24	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.97735
HCC1599	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.48138
NRL	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.0206
SRF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.3101
ZEB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.3741
NKX2-4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.4514
Rhabdomyosarcoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.707
PRRX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.0106
GFI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.8034
YAPC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.996032
organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
DOR 13	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.40189
ESX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.0709
CRCGN017_MCF10A.WT.HP_24H:N21	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.1026
golgi apparatus	LOCATE Predicted Protein Localization Annotations	1.0	null
MLXIPL	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.6983
NEUROD1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.4794
NCI-H292	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.78169
EMX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.8288
CAPAN-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.934311
NKX2-2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.4533
CRCGN017_MCF10A.WT.HP_24H:P03	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.66915
RMUG-S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.20494
NR6A1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.92
CRCGN017_MCF10A.WT.HP_24H:P10	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.7979
EMX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.5456
MSANTD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.5306
NR4A1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7088
ZNF770	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.645
HOXB8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.9683
FOS::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	48.9174
BARX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.6113
PHOX2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.4882
HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.2626
KMM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.905599
POU1F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.641
G140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.847312
FOXD2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	63.0181
SATB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.0462
BATF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.3265
NAMALWA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.67011
HNF1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.5877
CRCGN017_MCF10A.WT.HP_24H:N22	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.1281
BATF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.5204
CRCGN014_HEPG2_3H:K20	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.15576
MAF::NFE2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.1661
MNX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.6709
TGIF2LX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.4664
ZBTB32	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1616
TBX18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.3267
MDA-MB-175-VII	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.44457
NCI-H2795	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.58923
intracellular part	LOCATE Predicted Protein Localization Annotations	1.0	null
HMBOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.1004
CRCGN015_MCF10A.WT.HP_24H:P17	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.38104
KYSE-150	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.995356
ZNF16	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.2845
HELA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.28527
CRCGN016_MCF10A.TP53.M_24H:F14	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.68175
CREB3L4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.2938
GSE230263,GSE230265_3_v_1_runx1_human	RummaGEO Gene Perturbation Signatures	1.0	null
496100496_FWM_possible Alzheimer's disease_no TBI_88_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.80825
JDP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.2284
ZNF211	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1133
CRCGN008_HEPG2_24H:J06	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.2159
CRCGN017_MCF10A.WT.HP_24H:F03	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.02693
KLF9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	64.1527
CRCGN015_MCF10A.TP53.M_24H:A07	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.39665
496100469_TCx_no dementia_TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.7538
CRCGN014_HEPG2_24H:D11	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.9338
IMR-32	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.88641
496100426_PCx_no dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.27802
C32TG	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.997679
RAJI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18879
NR2F6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.3251
496100418_TCx_no dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	7.29152
intracellular organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
CRCGN016_MCF10A.TP53.M_24H:P20	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.90575
CRCGN015_MCF10A.TP53.M_24H:P22	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.2255
HCC2885	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.1113
NFIL3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.0416
YMB-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07815
HOXD9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.8311
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.06569
Trophoblastic neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.481
CRCGN011_HEPG2_24H:K13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.9634
SREBF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	59.9043
GSE115542_2_v_3_digoxin_human	RummaGEO Drug Perturbation Signatures	1.0	null
CRCGN014_HEPG2_24H:P03	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.49686
ZBTB26	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.6847
ZNF324	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.9426
496100466_PCx_probable Alzheimer's disease_no TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.9297
NKX6-3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.6083
NR1H2::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.72
STAT1::STAT2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	54.8258
HSF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.3364
MITF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.3883
JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.9719
CRCGN015_MCF10A.WT.HP_24H:K18	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.7047
CRCGN013_HEPG2_24H:N04	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	5.8768
NFIB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	58.4798
CHP-212	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.63468
NCI-H2373	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.40189
CRCGN011_HEPG2_24H:J18	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.33215
CRCGN016_MCF10A.TP53.M_24H:P16	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.32202
MKN-74	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.3476
MEIS2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.1109
TLX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.7328
TEAD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.3277
NCI-H1666	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.947495
CRCGN016_MCF10A.WT.HP_24H:D04	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	5.9775
MIXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.8517
CRCGN016_MCF10A.TP53.M_24H:D15	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.87649
BNC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.0626
VMRC-LCD	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11003
JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.803
COV413A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.24224
RARG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.1171
HOXA10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.8069
GSC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.5168
CRCGN016_MCF10A.TP53.M_24H:H08	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.50185
MYBL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.5081
HNF1A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.4359
G111	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.17953
CDX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.3775
MOLM-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.866619
PAX9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.7586
TP63	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1007
SNAI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.6064
CRCGN017_MCF10A.WT.HP_24H:O21	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.52125
FOS	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.7244
ZNF85	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.976
NCI-H2198	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.934311
SNAI3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.7964
ZBTB12	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.9761
CRCGN011_HEPG2_24H:D11	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.921
501A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.847312
PITX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.4971
CRCGN008_HEPG2_24H:C11	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.40415
OVSAHO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.62749
FOXC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	64.1476
GSE230263,GSE230265_6_v_1_runx1_human	RummaGEO Gene Perturbation Signatures	1.0	null
LMX1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.0554
OTX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.5047
HOXA5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.2429
HOXB6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.2015
PRRX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.3583
PDX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.3391
NR1I3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.9252
GBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.1125
ZNF136	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.338
FOSL2::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	50.7537
HEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.86701
YMB-1-E	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07815
RAX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.8241
CRCGN016_MCF10A.TP53.M_24H:D18	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.55871
GSE214382,GSE214383_6_v_2_ascl1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
ATF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.4457
NFYA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.6153
NFE2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.3799
GSE115542_2_v_0_digoxin_human	RummaGEO Drug Perturbation Signatures	1.0	null
JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.4079
ONECUT3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	75.6554
FOSL1::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.3457
EJM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.34404
SMAD2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.3614
LS1034	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.905599
HCC2911	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.31622
ESRRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.1956
LOX-IMVI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.947495
ZNF184	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.3794
HCC1395	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.917242
SNU-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46797
C3A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05696
Gestational trophoblastic neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.522
496100420_PCx_probable Alzheimer's disease_no TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.42183
BCL6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.6052
ubiquitin-like ligase-substrate adaptor activity	GO Molecular Function Annotations 2025	1.0	null
TBX5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.1754
CRCGN015_MCF10A.TP53.M_24H:P21	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.4664