association dataset threshold value standardized value NFIC_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null ISHIKAWA(HERAKLIO)02ER- COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 BRD-K54948591 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.01106 OCI-M2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.26562 GTEX-VUSG-0003-SM-3NMDK GTEx Tissue Sample Gene Expression Profiles 1.0 1.74512 NCI-H2135 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 increased bone mineral density GWASdb SNP-Phenotype Associations 1.0 1.25845 subthalamic nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.841454 CD8+_Tcells BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -0.940125 bretylium tosilate-3057 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Pancreatic Neoplasms CTD Gene-Disease Associations 1.0 1.08726 hippocampus (hippocampal formation)_19 yrs_F_12832 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.1629 GATA2 JASPAR Predicted Transcription Factor Targets 1.0 null HCC2935 CCLE Cell Line Gene CNV Profiles -1.0 -1.41443 BRD-K44212150 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.46867 BRD-K27726368 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.59375 Liver hepatocellular carcinoma_LIHC_TCGA-2Y-A9GW-01A-11R-A38B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-SE5C-0626-SM-2XCDV GTEx Tissue Sample Gene Expression Profiles -1.0 -1.35612 GTEX-U4B1-0526-SM-4DXTK GTEx Tissue Sample Gene Expression Profiles 1.0 0.909639 hydroflumethiazide-1687 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null BHLHE40_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-85-A513-01A-12R-A26W-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null outer CP in caudal midinferior temporal cortex (area TF) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.833902 MDST8 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.01206 GTEX-XQ3S-1126-SM-4BOPK GTEx Tissue Sample Gene Expression Profiles 1.0 0.932248 GTEX-U8XE-0326-SM-3DB8P GTEx Tissue Sample Gene Expression Profiles 1.0 1.09513 KDM5A ENCODE Transcription Factor Targets 1.0 null generates GeneRIF Biological Term Annotations 1.0 null GTEX-TML8-0526-SM-32QOQ GTEx Tissue Sample Gene Expression Profiles -1.0 -0.920674 H3K9ac_Brain Anterior Caudate Roadmap Epigenomics Histone Modification Site Profiles 1.0 null JURL-MK1 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 YD8 CCLE Cell Line Gene CNV Profiles -1.0 -1.59236 GTEX-U3ZH-0008-SM-4DXT2 GTEx Tissue Sample Gene Expression Profiles 1.0 1.22432 Carcinoma, Squamous Cell CTD Gene-Disease Associations 1.0 1.08091 abnormality of finger GWASdb SNP-Phenotype Associations 1.0 1.25845 H3K9me3_G1E_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null BRD-K77578964 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.74951 RKN Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.906535 tail of caudate nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.04566 primary motor cortex (area M1, area 4)_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.5273 TP53-22127205-IMR90-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-E1-A7YJ-01A-11R-A34F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_cardiac mesoderm_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-HT-A5RA-01A-11R-A28M-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-EB-A553-01A-12R-A27Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K75007044 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.6292 POLR2AphosphoS5_SK-N-SH_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RELA_GM19193_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K53335788 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.36965 NCI-H1975 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 abnormality of the glomerulus GWASdb SNP-Phenotype Associations 1.0 0.942765 15902281-TableS1a GeneSigDB Published Gene Signatures 1.0 null GTEX-PWO3-1026-SM-2I5F2 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.1113 KDM5B ENCODE Transcription Factor Targets 1.0 null GTEX-T5JW-0003-SM-3NMAD GTEx Tissue Sample Gene Expression Profiles 1.0 1.61886 psychotic disorder GWASdb SNP-Disease Associations 1.0 1.10764 hodgkin's lymphoma GWASdb SNP-Disease Associations 1.0 1.31717 neoplasm of the respiratory system GWASdb SNP-Phenotype Associations 1.0 0.340644 GTEX-WEY5-2126-SM-3GILK GTEx Tissue Sample Gene Expression Profiles -1.0 -0.999394 EFM-192C Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.79771 YY1 ENCODE Transcription Factor Targets 1.0 null attributable GeneRIF Biological Term Annotations 1.0 null MAZ_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-U8XE-1726-SM-4E3IF GTEx Tissue Sample Gene Expression Profiles 1.0 0.89961 cognitive impairment GWASdb SNP-Phenotype Associations 1.0 0.59466 SKBR3 CCLE Cell Line Gene CNV Profiles 1.0 1.77899 H3K4me3_Brain Hippocampus Middle Roadmap Epigenomics Histone Modification Site Profiles 1.0 null BRD-K75281646 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.86696 diffuse mesangial sclerosis GWASdb SNP-Phenotype Associations 1.0 1.25845 ZBTB7A ENCODE Transcription Factor Targets 1.0 null sulfaquinoxaline-6788 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null NURR1 MotifMap Predicted Transcription Factor Targets 1.0 null H3K27ac_CH12.LX_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null CEBPB_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null REST_Panc1_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A ENCODE Transcription Factor Targets 1.0 null MYC_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null striatum_23 yrs_M_12300 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.872515 HDAC6_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null abnormality of the urinary system GWASdb SNP-Phenotype Associations 1.0 0.383579 POLR2AphosphoS5_Panc1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-T2IS-2026-SM-4DM6W GTEx Tissue Sample Gene Expression Profiles 1.0 1.06557 CTCF_myotube_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BCL3_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MYC_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NFIC_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-X4EO-0926-SM-3P5Z2 GTEx Tissue Sample Gene Expression Profiles 1.0 0.962533 fluphenazine-1662 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Necrosis CTD Gene-Disease Associations 1.0 1.21919 RELA_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null pancreatic GeneRIF Biological Term Annotations 1.0 null BRD-K43639523 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.56612 metoclopramide-2353 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null abnormal renal physiology GWASdb SNP-Phenotype Associations 1.0 0.283851 OE19 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 H3K27ac_cortical plate_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null BRD-K35860167 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.11588 GTEX-QEG4-0008-SM-48TYZ GTEx Tissue Sample Gene Expression Profiles 1.0 2.0416 GTEX-S95S-0002-SM-3NM8K GTEx Tissue Sample Gene Expression Profiles 1.0 1.44574 STAT3_MCF 10A_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null STAT3 ENCODE Transcription Factor Targets 1.0 null cisplatin_homo sapiens_gds3910 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null BRD-K95323755 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.26721 BRD-K64347765 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.27225 GTEX-WRHU-0826-SM-3MJFN GTEx Tissue Sample Gene Expression Profiles -1.0 -0.856557 ovarian GeneRIF Biological Term Annotations 1.0 null Adrenocortical carcinoma_ACC_TCGA-OR-A5K2-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null pou4f1_20376082_fetal_liver_lof_mouse_gpl1261_gds4042 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.206111 C2BBE1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.18262 pivampicillin-5465 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null mRNA_ASCL1_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells -1.0 null H3K4me3_MCF-7_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_astrocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-NC-A5HQ-01A-11R-A26W-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SCL-19346495-HPC-7-human ChEA Transcription Factor Binding Site Profiles 1.0 null CTCF_GM12878_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null SMAD4-21741376-HESC-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null H3K4me3_GM12865_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTF2F1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null G142 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.83916 H3K27ac_embryonic fibroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-N7MS-0011-R11A-SM-2HMJS GTEx Tissue Sample Gene Expression Profiles -1.0 -2.33217 H3K4me3_cerebellum_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-RU72-0011-R6A-SM-2TF71 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.78132 harboring GeneRIF Biological Term Annotations 1.0 null MYC_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K36208388 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.76163 GTEX-PLZ6-0008-SM-48TD5 GTEx Tissue Sample Gene Expression Profiles 1.0 1.25234 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EK-A2RN-01A-12R-A213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-QMR6-0011-R6A-SM-32PKP GTEx Tissue Sample Gene Expression Profiles -1.0 -0.846618 increased density of long bones GWASdb SNP-Phenotype Associations 1.0 1.25845 POLR2A_HepG2_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K70751829 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.8033 vitro GeneRIF Biological Term Annotations 1.0 null primary visual cortex (striate cortex, area V1/17)_10 mos_M_12977 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.42934 H3K27me3_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null developmental GAD High Level Gene-Disease Associations 1.0 0.303208 acemetacin-7442 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null BCLAF1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null FOS_MCF 10A_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null NR3C1 ENCODE Transcription Factor Targets 1.0 null H3K4me1_astrocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null abnormality of the radius GWASdb SNP-Phenotype Associations 1.0 1.25845 ELK1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null mRNA_MYOD1_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells -1.0 null Brain Lower Grade Glioma_LGG_TCGA-FG-6692-01A-11R-1896-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SZ in medial temporal-occipital cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.904597 striatum_37 yrs_M_12303 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -3.02712 Craniofacial Abnormalities CTD Gene-Disease Associations 1.0 1.05648 BACH1 ENCODE Transcription Factor Targets 1.0 null GTEX-RNOR-0011-R7A-SM-2TF4V GTEx Tissue Sample Gene Expression Profiles -1.0 -1.05661 cellular_component LOCATE Predicted Protein Localization Annotations 1.0 null SNU738 CCLE Cell Line Gene CNV Profiles -1.0 -2.59447 SHSYSY-RA BioGPS Cell Line Gene Expression Profiles -1.0 -0.974542 UBTF_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K93726930 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.21196 GTEX-PLZ6-0726-SM-3P619 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.933277 17148579-TableS1 GeneSigDB Published Gene Signatures 1.0 null abnormality of the upper limb GWASdb SNP-Phenotype Associations 1.0 1.14843 RAD21_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-OXRP-0926-SM-48TC1 GTEx Tissue Sample Gene Expression Profiles 1.0 0.881516 FOXA1_T47D_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27me3_brain_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null VZ in dorsomedial parietal cortex (area 7m) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.34872 GTEX-QMRM-0526-SM-2I5GA GTEx Tissue Sample Gene Expression Profiles -1.0 -1.60301 Precancerous Conditions CTD Gene-Disease Associations 1.0 1.20751 GTEX-XUJ4-0526-SM-4BOON GTEx Tissue Sample Gene Expression Profiles -1.0 -1.20332 Acute Myeloid Leukemia_LAML_TCGA-AB-3007-03A-01T-0736-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null carbachol-6742 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null POLR2A_HGPS cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H2AFZ_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-G6-A5PC-01A-11R-A33J-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K34158806 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.82277 POLR2A_HCT116_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Arsenic CTD Gene-Chemical Interactions 1.0 null NCI-H1781 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4813-01A-01R-1277-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-UTHO-0011-R1A-SM-3GIJO GTEx Tissue Sample Gene Expression Profiles -1.0 -1.45435 loxapine-6694 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null abnormality of the urinary system physiology GWASdb SNP-Phenotype Associations 1.0 0.259433 abnormality of the lung GWASdb SNP-Phenotype Associations 1.0 0.189207 BRD-K06029218 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.00217 diabetes mellitus GWASdb SNP-Phenotype Associations 1.0 0.33503 NFYA ENCODE Transcription Factor Targets 1.0 null abundantly GeneRIF Biological Term Annotations 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-MI-A75C-01A-11R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K85917058 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.07393 TBL1XR1 ENCODE Transcription Factor Targets 1.0 null MAZ_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MYC_MCF-7_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null E2F1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-U4B1-1426-SM-4DXTX GTEx Tissue Sample Gene Expression Profiles 1.0 1.09726 BRD-K29331543 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.80191 5230742-862 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me3_erythroblast_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_limb_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-FG-A6J3-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_megakaryocyte_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null BRD-K53319404 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.56127 pvt1nbea GeneRIF Biological Term Annotations 1.0 null H3K9ac_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null BRD-K22087390 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.05556 dorsolateral prefrontal cortex_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.942048 VIIIA, right, lateral hemisphere Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.55393 TBP_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27me3_Mobilized CD34 Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null BRD-K56470219 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.3162 H3K4me3_bone marrow macrophage_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null POU2F2_GM12891_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null HEK 293 T-rex BioGPS Cell Line Gene Expression Profiles 1.0 1.10405 NCIH211 CCLE Cell Line Gene Expression Profiles 1.0 1.6882 GTEX-X8HC-2726-SM-46MUA GTEx Tissue Sample Gene Expression Profiles 1.0 1.19628 methapyrilene-4990 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null TRIM28 ENCODE Transcription Factor Targets 1.0 null NCI-H510A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.00136 Sarcoma_SARC_TCGA-3R-A8YX-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null metrifonate-7287 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null substantia nigra, pars reticulata, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.900528 DB CCLE Cell Line Gene CNV Profiles -1.0 -1.97985 NCI-H522 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.31535 H3K4me3_spleen_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null SKM-1 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 NCI-H446 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 H3K4me3_myocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null BRD-K31870622 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.32906 aging GAD High Level Gene-Disease Associations 1.0 0.293278 lysosome LOCATE Predicted Protein Localization Annotations 1.0 null BRD-K77935284 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.41859 BRD-K16570418 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 4.34909 lateral parabrachial nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.875101 artery disease GWASdb SNP-Disease Associations 1.0 0.199974 H3K4me1_GM12878_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_GM12878_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2AphosphoS5_GM12891_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null FXR MotifMap Predicted Transcription Factor Targets 1.0 null CTBP2 ENCODE Transcription Factor Targets 1.0 null CPC-N Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.43636 LU-135 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 GTEX-NPJ8-0011-R11A-SM-2YUMS GTEx Tissue Sample Gene Expression Profiles -1.0 -0.972814 abnormality of phalanx of finger GWASdb SNP-Phenotype Associations 1.0 1.25845 BRD-K61168922 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.19061 GTEX-RM2N-1826-SM-2TF5B GTEx Tissue Sample Gene Expression Profiles -1.0 -1.07413 NCIH524 CCLE Cell Line Gene CNV Profiles 1.0 2.09508 levonorgestrel-3708 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null MXI1_SK-N-SH_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K96778009 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.32495 abnormality of the choroid GWASdb SNP-Phenotype Associations 1.0 0.408206 SK-MM-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.98686 low GeneRIF Biological Term Annotations 1.0 null REST_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAX_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-FF-8042-01A-11R-2213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null abnormality of the ribs GWASdb SNP-Phenotype Associations 1.0 1.25845 BRD-K82863660 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.25833 sulfaquinoxaline-6090 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me3_NT2-D1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-Q2AG-0011-R5A-SM-2HMJH GTEx Tissue Sample Gene Expression Profiles -1.0 -0.927483 Head and Neck squamous cell carcinoma_HNSC_TCGA-P3-A6T4-01A-11R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-P78B-0426-SM-2I5F5 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.34058 Liver hepatocellular carcinoma_LIHC_TCGA-CC-A1HT-01A-11R-A131-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null methylation GeneRIF Biological Term Annotations 1.0 null NCI-H920 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.43228 abnormalities of the peripheral arteries GWASdb SNP-Phenotype Associations 1.0 0.221944 dorsolateral prefrontal cortex_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 2.46529 abnormality of the hand GWASdb SNP-Phenotype Associations 1.0 1.25845 GTEX-R45C-1226-SM-48FEE GTEx Tissue Sample Gene Expression Profiles 1.0 0.861059 Brain Lower Grade Glioma_LGG_TCGA-TM-A84J-01A-11R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null UBTF_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_keratinocyte_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null BRD-K15052303 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.33656 VZ in caudal midinferior temporal cortex (area TF) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -2.07143 NCIH810 CCLE Cell Line Gene CNV Profiles 1.0 1.62908 VZ in frontal polar cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.22085 nervous system disease GWASdb SNP-Disease Associations 1.0 0.163264 VZ in primary somatosensory cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.916737 SMC3_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_mammary epithelial cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-R3RS-0626-SM-48FE1 GTEx Tissue Sample Gene Expression Profiles 1.0 1.75782 GTEX-PWN1-2426-SM-48TDD GTEx Tissue Sample Gene Expression Profiles 1.0 0.999727 ETS1 ENCODE Transcription Factor Targets 1.0 null STAT3-18555785-MESC-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null BRD-K85110576 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.03155 POLR2A_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HUH-7 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.92735 AR ChEA Transcription Factor Targets 1.0 null GTEX-QMR6-0011-R1A-SM-32PKW GTEx Tissue Sample Gene Expression Profiles -1.0 -1.18608 RUNX1-21571218-MEGAKARYOCYTES-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null H3K9ac_heart_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Human - Motor Cortex - Cluster - FEZF2+ RNF144A-AS1+ Layer 5 glutamatergic neuron HuBMAP Azimuth Cell Type Annotations 1.0 null gata1_15895080_e12dot5_liver_megakaryocyte_lof_mouse_gpl1261_gds1316 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.047118 lung disease GWASdb SNP-Disease Associations 1.0 0.198932 posteroventral (inferior) parietal cortex_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.01448 sirolimus-1022 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Prostate adenocarcinoma_PRAD_TCGA-QU-A6IL-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MYC_MCF 10A_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRCA1_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EWS-FLI1-20517297-SK-N-MC-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null TBP_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TAF1_PFSK-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null MYOG_myocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-UPK5-0003-SM-3NMDI GTEx Tissue Sample Gene Expression Profiles 1.0 1.62267 BACH1_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null abnormal gallbladder morphology GWASdb SNP-Phenotype Associations 1.0 0.375403 KARPAS-45 GDSC Cell Line Gene Expression Profiles -1.0 -2.25092 Lung adenocarcinoma_LUAD_TCGA-50-5931-01A-11R-1755-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_retinal pigment epithelial cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null MAX_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null prostate GeneRIF Biological Term Annotations 1.0 null organelle LOCATE Predicted Protein Localization Annotations 1.0 null medial geniculate complex, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.12465 Wholebrain BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.63879 TC-YIK COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 BRD-K27354087 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.34432 ventrolateral prefrontal cortex_16 pcw_M_12879 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.827226 H3K4me1_small intestine_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GM97 BioGPS Cell Line Gene Expression Profiles 1.0 0.948224 CTCF_bronchial epithelial cell_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K41025232 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.43562 BRD-K08881846 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.73178 BRD-K27139040 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.08346 felodipine-965 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null pentoxyverine-1268 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null nephrosclerosis GWASdb SNP-Phenotype Associations 1.0 1.25845 extracellular GeneRIF Biological Term Annotations 1.0 null KDM1A_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_fibroblast of villous mesenchyme_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null chronic kidney disease GWASdb SNP-Phenotype Associations 1.0 1.00059 Crus I, right, paravermis Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.969432 GTEX-Q2AI-0008-SM-48U2H GTEx Tissue Sample Gene Expression Profiles 1.0 2.26632 SCLC-21H Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.00519 NCIH2171 CCLE Cell Line Gene CNV Profiles 1.0 1.51548 RUNX3_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K79568363 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.35359 H3K4me3_K562_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null EGR1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_spleen_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Prostate adenocarcinoma_PRAD_TCGA-V1-A8WV-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_keratinocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-R55E-0011-R7A-SM-2TC5Z GTEx Tissue Sample Gene Expression Profiles -1.0 -1.28237 abnormality of bone mineral density GWASdb SNP-Phenotype Associations 1.0 1.09492 inferolateral temporal cortex (area TEv, area 20)_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.80187 624 MEL Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.06707 BRD-K57639176 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.10642 zoxazolamine-1270 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null BRD-K83815065 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.60533 GTEX-SN8G-0008-SM-4DM4X GTEx Tissue Sample Gene Expression Profiles 1.0 1.54843 STAT6 MotifMap Predicted Transcription Factor Targets 1.0 null PPARG-20176806-THIOMACROPHAGE-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null BRD-K29760532 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.26922 phenotype GeneRIF Biological Term Annotations 1.0 null ARNT ChEA Transcription Factor Targets 1.0 null fastigial nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.34385 GTEX-TML8-0008-SM-4DXUI GTEx Tissue Sample Gene Expression Profiles 1.0 1.02589 H3K4me3_BJ_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null COR-L23 GDSC Cell Line Gene Expression Profiles 1.0 1.77915 BRD-K03852663 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 5.16513 SG in primary somatosensory cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.886152 snp GeneRIF Biological Term Annotations 1.0 null TMK-1 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 OCILY19 CCLE Cell Line Gene CNV Profiles -1.0 -2.31778 GTEX-NPJ8-0011-R5a-SM-2HMJY GTEx Tissue Sample Gene Expression Profiles -1.0 -0.864881 GTEX-PX3G-0326-SM-2I3EO GTEx Tissue Sample Gene Expression Profiles -1.0 -1.52114 H3K4me3_fibroblast of villous mesenchyme_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null central glial substance Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.38815 indapamide-2322 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null POLR2AphosphoS5_endothelial cell of umbilical vein_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7178-01A-21R-2016-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-DR-A0ZM-01A-12R-A10U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null pentamidine-4573 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Pancreatic adenocarcinoma_PAAD_TCGA-H8-A6C1-01A-11R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_mammary epithelial cell_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null mediate GeneRIF Biological Term Annotations 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-L3-A524-01A-11R-A262-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HCC44 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.894322 GTEX-WZTO-1326-SM-3NM8X GTEx Tissue Sample Gene Expression Profiles -1.0 -1.65565 Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5885-01A-11R-1592-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me1_CD8 Memory Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null YY1_GM12891_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K40697889 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.46736 Lung squamous cell carcinoma_LUSC_TCGA-O2-A52N-01A-11R-A26W-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2A_GM12891_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null abnormality of the globe GWASdb SNP-Phenotype Associations 1.0 0.194623 sulfabenzamide-2814 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null KYSE450 CCLE Cell Line Gene CNV Profiles 1.0 1.50548 HCFC1 ENCODE Transcription Factor Targets 1.0 null POLR2A_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null H2AFZ_mammary epithelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-QEG4-1226-SM-2S1P6 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.876869 EP300_GM12878_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27ac_H1-hESC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null ofloxacin-7372 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null NCI-H1975 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.87254 striatum_1 yrs_F_12830 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.945138 isoconazole-5857 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Trachea BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 1.80046 Adrenocortical carcinoma_ACC_TCGA-OR-A5LD-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null endocrine gland cancer GWASdb SNP-Disease Associations 1.0 0.412049 occipital neocortex_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 2.25617 HDAC2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null cerebellar cortex_15 yrs_M_12299 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.69128 H3K4me3_GM12866_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null cancer GAD High Level Gene-Disease Associations 1.0 0.315943 BRD-K57293986 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.08566 H3K4me3_skeletal muscle cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-S7SE-0011-R11A-SM-2XCDD GTEx Tissue Sample Gene Expression Profiles -1.0 -1.71921 GTEX-QEL4-2126-SM-447AE GTEx Tissue Sample Gene Expression Profiles 1.0 0.922947 GTEX-U3ZN-0002-SM-3NMDF GTEx Tissue Sample Gene Expression Profiles 1.0 1.98799 BRCA1 ENCODE Transcription Factor Targets 1.0 null CA3 field, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.74127 temporal pole, right, medial aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.09253 GTEX-XMD1-0011-R10A-SM-4AT4A GTEx Tissue Sample Gene Expression Profiles -1.0 -0.903911 BRD-K14070721 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.17383 cisplatin_mus musculus_gpl339_gds3099 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-UJMC-0526-SM-3GAE3 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.830696 mRNA_ASCL2_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells -1.0 null GTEX-PLZ5-0326-SM-3P614 GTEx Tissue Sample Gene Expression Profiles 1.0 0.883792 H2AFZ ENCODE Transcription Factor Targets 1.0 null GTEX-XPT6-0126-SM-4B65S GTEx Tissue Sample Gene Expression Profiles -1.0 -1.25058 CA1 field, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.54699 MAZ_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_B cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null amygdaloid complex_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.907603 cerebellar cortex_23 yrs_M_12300 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.88994 PAX5_GM12878_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null respiratory system disease GWASdb SNP-Disease Associations 1.0 0.180747 GTEX-R55F-0011-R6A-SM-2TF4L GTEx Tissue Sample Gene Expression Profiles -1.0 -0.867665 globus pallidus, internal segment, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.74666 H3K4me3_BE2C_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-TMMY-1726-SM-4DXTD GTEx Tissue Sample Gene Expression Profiles 1.0 0.949244 mediodorsal nucleus of thalamus_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.855035 ascorbic acid-5407 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me3_C2C12_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_astrocyte of the spinal cord_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null STAT1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null STAT4 ChEA Transcription Factor Targets 1.0 null paracentral lobule, posterior part, left, lateral bank of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.861269 COLO 678 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.848661 NCI-H345 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -2.45444 Lung adenocarcinoma_LUAD_TCGA-86-7713-01A-11R-2066-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCI-H2087 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 BRD-A40504327 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.32606 G130 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.43438 GTEX-XXEK-2426-SM-4BRUS GTEx Tissue Sample Gene Expression Profiles 1.0 0.915359 Kidney Chromophobe_KICH_TCGA-KO-8404-01A-11R-2315-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MAX_A549_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H1792 GDSC Cell Line Gene Expression Profiles 1.0 2.18539 ciclopirox-3317 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null PML ENCODE Transcription Factor Targets 1.0 null H3K36me3_H7_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null lateral ganglionic eminence_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.29091 CREB1 ENCODE Transcription Factor Targets 1.0 null posterior cortical nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.23731 ZMIZ1_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-SNMC-0126-SM-2XCFO GTEx Tissue Sample Gene Expression Profiles -1.0 -1.10809 CTCF_mammary epithelial cell_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_fibroblast of upper leg skin_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_Jurkat_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null BRD-K76922696 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.60975 H3K4me3_small intestine_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Cleft Palate CTD Gene-Disease Associations 1.0 1.02485 BRD-K59099886 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.15067 medial subdivision of area 10 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.35637 MEF2A_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null KAT2A_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HNF1A_01_02 KnockTF Gene Expression Profiles with Transcription Factor Perturbations 1.0 2.73729 H3K27me3_GM12878_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null SP1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-T5JC-2526-SM-4DM6G GTEx Tissue Sample Gene Expression Profiles -1.0 -2.42459 etiocholanolone-4298 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me1_kidney_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null BRD-A20731954 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.20676 SPI1_GM12878_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H2198 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.48865 COLO-800 GDSC Cell Line Gene Expression Profiles -1.0 -1.66256 BRD-K91745830 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.4723 MYC_NB4_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_MCF-7_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_HL-60_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null CHD4_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null abnormality of the humerus GWASdb SNP-Phenotype Associations 1.0 1.25845 Lymphoma, Follicular HuGE Navigator Gene-Phenotype Associations 1.0 null ECC12 CCLE Cell Line Gene Expression Profiles -1.0 -1.49561 Head and Neck squamous cell carcinoma_HNSC_TCGA-BB-A5HY-01A-11R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CHD1 ENCODE Transcription Factor Targets 1.0 null GTEX-R55E-1026-SM-2TC5S GTEx Tissue Sample Gene Expression Profiles -1.0 -0.845831 BRD-K46936325 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.33759 BRD-K37564297 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.30544 RBBP5_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-DU-6406-01A-11R-1708-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CREB1_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_brown adipose tissue_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null inner CP in ventromedial extrastriate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.14063 BRD-K66416915 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.16594 GTEX-SNOS-0926-SM-4DM7A GTEx Tissue Sample Gene Expression Profiles -1.0 -1.21728 REST ENCODE Transcription Factor Targets 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-A3-3335-01A-01R-0864-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K44622259 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.01345 BRD-K63919349 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.31438 BRD-K92879007 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.29149 methotrexate_homo sapiens_gpl570_gse11440 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-94-7033-01A-11R-1949-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GATA2-21571218-MEGAKARYOCYTES-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null GTEX-R55G-0326-SM-48FDM GTEx Tissue Sample Gene Expression Profiles -1.0 -1.28424 GTEX-N7MT-1226-SM-2D7W4 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.32548 BRD-K84239940 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.24471 SCLY ChEA Transcription Factor Targets 1.0 null GTEX-PLZ4-2826-SM-3P617 GTEx Tissue Sample Gene Expression Profiles 1.0 1.02597 GTEX-XV7Q-1426-SM-4BRWA GTEx Tissue Sample Gene Expression Profiles 1.0 1.06957 Lung squamous cell carcinoma_LUSC_TCGA-NC-A5HR-01A-21R-A26W-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K22229548 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.39698 KYSE-180 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 induction GeneRIF Biological Term Annotations 1.0 null basolateral nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.57443 H3K4me3_GM06990_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null JUND_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null fulvestrant_homo sapiens_gpl570_gse22533 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-U3ZN-1426-SM-3DB87 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.985548 POLR2A_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K39809702 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.69118 H3K4me3_astrocyte of the cerebellum_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null NCI-H460 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.28173 trihexyphenidyl-4015 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null primary somatosensory cortex (area S1, areas 3,1,2)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.09738 H2AFZ_astrocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null nutrition disease GWASdb SNP-Disease Associations 1.0 0.434468 Bladder Urothelial Carcinoma_BLCA_TCGA-KQ-A41N-01A-11R-A33J-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K63008302 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 4.15015 POLR2AphosphoS5_GM12892_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null amorolfine LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.18392 GTEX-SNMC-0008-SM-4DM5A GTEx Tissue Sample Gene Expression Profiles 1.0 1.99386 BRD-K69093885 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.19159 GTEX-T2IS-0011-R6A-SM-32QP2 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.59751 GTEX-XGQ4-0004-SM-4AT5S GTEx Tissue Sample Gene Expression Profiles 1.0 1.60774 abnormality of the skull GWASdb SNP-Phenotype Associations 1.0 0.942765 neoplasia of the pleura GWASdb SNP-Phenotype Associations 1.0 1.01655 KPL-4 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.155 normal GeneRIF Biological Term Annotations 1.0 null POLR2A_MCF 10A_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null prostate cancer GAD Gene-Disease Associations 1.0 null ERG-20517297-VCAP-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null MAX_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K93785828 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.09611 betonicine-4301 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null head and face region of M1 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.53192 Neoplasms, Experimental CTD Gene-Disease Associations 1.0 1.01099 RAD21_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_GM15510_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XQ3S-0626-SM-4BOOB GTEx Tissue Sample Gene Expression Profiles -1.0 -1.7881 SMARCB1 ENCODE Transcription Factor Targets 1.0 null H3K4me1_heart_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null M059K Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.68305 SNB19 BioGPS Cell Line Gene Expression Profiles -1.0 -2.27584 GTEX-XGQ4-0326-SM-4GIEE GTEx Tissue Sample Gene Expression Profiles -1.0 -1.72272 Lung adenocarcinoma_LUAD_TCGA-05-4434-01A-01R-1206-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K22789469 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.40958 EZH2_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null indicator GeneRIF Biological Term Annotations 1.0 null GATA1 ChEA Transcription Factor Targets 1.0 null POLR2AphosphoS5_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K21423945 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.06748 COLO320 CCLE Cell Line Gene CNV Profiles 1.0 2.63925 EBF1_GM12878_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null number GeneRIF Biological Term Annotations 1.0 null behavioral abnormality GWASdb SNP-Phenotype Associations 1.0 0.135577 phenindione-7289 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null superior olivary complex, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.928457 CI1 CCLE Cell Line Gene Expression Profiles 1.0 1.45032 5194442-6594 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null SIX5 ENCODE Transcription Factor Targets 1.0 null lateral nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.18737 CTCF_bronchial epithelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WFG8-0001-SM-4LVN8 GTEx Tissue Sample Gene Expression Profiles 1.0 1.38165 YY1_GM12892_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PL18 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 BRD-K02321382 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.65656 BRD-K39681206 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.86853 neuroblastoma GeneRIF Biological Term Annotations 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-G7-6796-01A-11R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-X5EB-0004-SM-46MWA GTEx Tissue Sample Gene Expression Profiles 1.0 1.40009 HSC-39 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 NCI-H23 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.984417 BRD-K26074237 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 4.14529 H3K4me1_olfactory bulb_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null SMC3_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-NPJ8-0011-R7a-SM-2HMJV GTEx Tissue Sample Gene Expression Profiles -1.0 -0.902911 Sarcoma_SARC_TCGA-X6-A8C4-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POU2F2_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lupus Erythematosus, Systemic dbGAP Gene-Trait Associations 1.0 0.201297 tgfbeta1 GeneRIF Biological Term Annotations 1.0 null CHD1_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H2AFZ_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null JHOS-3 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 Pauciarticular juvenile arthritis_Peripheral blood mononuclear cell_GSE1402 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 1.7104 VZ in dorsomedial frontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.37794 BRD-K29083370 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.41027 NCI-H28 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.21829 MAX ENCODE Transcription Factor Targets 1.0 null RCC10RGB COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A70O-01A-11R-A35K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-T5JW-0426-SM-4DM7M GTEx Tissue Sample Gene Expression Profiles 1.0 1.25573 H3K4me1_liver_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null D-566MG COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 ventricular (matrix) zone of pons Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.20109 CA2 field, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.32695 Prostate adenocarcinoma_PRAD_TCGA-KK-A8I8-01A-11R-A36G-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K03886176 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.19141 pineal gland Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.14322 EZH2_myotube_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EA-A4BA-01A-21R-A26T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null claustrum, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.828338 RELA_GM10847_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ELF1_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null tiabendazole-4579 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null EGR1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null FU97 CCLE Cell Line Gene Expression Profiles -1.0 -2.72293 Prostate adenocarcinoma_PRAD_TCGA-V1-A8MG-01A-11R-A36G-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K9me1_keratinocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null globose nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.51733 GTEX-S32W-0126-SM-4AD61 GTEx Tissue Sample Gene Expression Profiles 1.0 0.966785 EW-12 GDSC Cell Line Gene Expression Profiles 1.0 1.66595 RCOR1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MINO CCLE Cell Line Gene Expression Profiles 1.0 1.44164 GTEX-R53T-0926-SM-3GADH GTEx Tissue Sample Gene Expression Profiles -1.0 -1.16255 ZKSCAN1 ENCODE Transcription Factor Targets 1.0 null COR-L23 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 dorsolateral prefrontal cortex_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.45697 doxorubicin_homo sapiens_gpl570_gse46493 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-7056-01A-11R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-S7PM-0008-SM-3NM9Q GTEx Tissue Sample Gene Expression Profiles 1.0 1.41828 COLO 741 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.76614 H3K4me1_H1 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-FS-A1ZU-06A-12R-A18T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-RUSQ-0226-SM-47JWT GTEx Tissue Sample Gene Expression Profiles 1.0 0.827052 AR-20517297-VCAP-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null GTEX-T5JC-0001-SM-3NMAK GTEx Tissue Sample Gene Expression Profiles 1.0 2.09548 pontine raphe nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.944251 MAFF ENCODE Transcription Factor Targets 1.0 null MXI1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CREB1-20920259-GC1-SPG-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null ATF3 MotifMap Predicted Transcription Factor Targets 1.0 null GTEX-S7SE-0011-R7A-SM-2XCDI GTEx Tissue Sample Gene Expression Profiles -1.0 -1.27725 H3K4me1_Brain Hippocampus Middle Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-WN-A9G9-01A-12R-A37K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null disease of metabolism GWASdb SNP-Disease Associations 1.0 0.292743 EGR1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null myc GeneRIF Biological Term Annotations 1.0 null GTEX-S7PM-0011-R5A-SM-3NM8G GTEx Tissue Sample Gene Expression Profiles -1.0 -1.01497 H3K27ac_bone marrow_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null RBBP8 MSigDB Cancer Gene Co-expression Modules 1.0 null buspirone-6743 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null because GeneRIF Biological Term Annotations 1.0 null glomerulosclerosis GWASdb SNP-Phenotype Associations 1.0 1.25845 UBTF ENCODE Transcription Factor Targets 1.0 null KYSE450 CCLE Cell Line Gene Expression Profiles 1.0 1.86709 BRD-K80483148 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.35224 wwox GeneRIF Biological Term Annotations 1.0 null BHLHE40 ENCODE Transcription Factor Targets 1.0 null BRD-K84060528 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.20154 GTEX-WFG7-0726-SM-3GIKO GTEx Tissue Sample Gene Expression Profiles -1.0 -1.06613 Lung squamous cell carcinoma_LUSC_TCGA-63-7023-01A-11R-1949-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Prostate adenocarcinoma_PRAD_TCGA-KK-A7AZ-01A-12R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CCNT2 ENCODE Transcription Factor Targets 1.0 null GTEX-X4EP-2926-SM-3P5YQ GTEx Tissue Sample Gene Expression Profiles 1.0 1.38188 GTEX-NPJ7-0011-R6a-SM-2I3G7 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.25983 SIN3A_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null locus GeneRIF Biological Term Annotations 1.0 null Brain Lower Grade Glioma_LGG_TCGA-KT-A7W1-01A-11R-A34F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2A_bone marrow_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WZTO-0011-R6B-SM-4E3J6 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.25636 H3K36me3_G1E-ER4_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-QV44-0526-SM-2S1RE GTEx Tissue Sample Gene Expression Profiles -1.0 -1.00228 BRD-A69097282 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.46844 mesothelioma GeneRIF Biological Term Annotations 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-B9-A44B-01A-11R-A24Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null susceptibility GeneRIF Biological Term Annotations 1.0 null SIN3A_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K21176717 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.14164 POLR2A_MCF 10A_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null independently GeneRIF Biological Term Annotations 1.0 null BRD-K59130962 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.40012 KYSE-220 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 ChIP_PRDM14_21183938 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null ELF1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K01286616 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.12572 ETS1_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null mRNA_GATA3_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells -1.0 null H3K27ac_MEL cell line_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null NCI-H2369 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.47272 USF1 ENCODE Transcription Factor Targets 1.0 null when GeneRIF Biological Term Annotations 1.0 null primary motor cortex (area M1, area 4)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.911465 0316684-0000-7057 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null SAP30 ENCODE Transcription Factor Targets 1.0 null piperacillin-3845 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null CREM ChEA Transcription Factor Targets 1.0 null GTEX-XPVG-0826-SM-4B654 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.27954 H3K4me3_GM12878_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null BRD-K74727418 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.08913 PAX5_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SP1_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null STAT5A_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ATF2_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BHT-101 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 lateral habenular nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.58179 H3K4me3_liver_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null lytic vacuole LOCATE Predicted Protein Localization Annotations 1.0 null SJSA1 CCLE Cell Line Gene Expression Profiles -1.0 -1.7422 pipemidic acid-6752 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null mRNA_CDX2_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells -1.0 null GTEX-OHPL-2426-SM-48TDN GTEx Tissue Sample Gene Expression Profiles 1.0 1.05936 MYC_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null OV90 CCLE Cell Line Gene Expression Profiles -1.0 -1.72779 GTEX-WL46-0011-R11A-SM-3MJFT GTEx Tissue Sample Gene Expression Profiles -1.0 -1.56263 EP300_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_fibroblast of lung_hg19_7 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_Panc1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null nitrofurantoin-7373 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-KR-A7K7-01A-11R-A33J-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null scopolamine-3018 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null MYOG ENCODE Transcription Factor Targets 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4821-01A-01R-1503-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null pyrvinium-3518 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-U3ZN-1026-SM-4DXTC GTEx Tissue Sample Gene Expression Profiles 1.0 1.05446 H3K27ac_Brain Hippocampus Middle Roadmap Epigenomics Histone Modification Site Profiles 1.0 null nbea GeneRIF Biological Term Annotations 1.0 null primary somatosensory cortex (area S1, areas 3,1,2)_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.05064 POLR2AphosphoS5_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EBF1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null butyrylcholine-cl LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 5.18246 H3K4me1_cerebellum_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null juvenile rheumatoid arthritis GWASdb SNP-Phenotype Associations 1.0 0.792263 HEB MotifMap Predicted Transcription Factor Targets 1.0 null NRF1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null fasting hypoglycemia GWASdb SNP-Phenotype Associations 1.0 0.607797 TE-8 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 GTEX-V1D1-0526-SM-4JBGW GTEx Tissue Sample Gene Expression Profiles -1.0 -0.879001 GTEX-N7MS-0011-R1a-SM-2HMJG GTEx Tissue Sample Gene Expression Profiles -1.0 -0.930399 abnormal cortical bone morphology GWASdb SNP-Phenotype Associations 1.0 1.25845 ZNF384_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_H1 BMP4 Derived Mesendoderm Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GTEX-OIZF-1526-SM-3MJGY GTEx Tissue Sample Gene Expression Profiles -1.0 -1.44069 H3K4me3_LNCaP clone FGC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XQ3S-1726-SM-4BOOD GTEx Tissue Sample Gene Expression Profiles 1.0 1.45102 abnormality of the gallbladder GWASdb SNP-Phenotype Associations 1.0 0.329779 LC-2-AD COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 SIN3A_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_embryonic fibroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null BRD-K27540772 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.06145 GTEX-OXRO-0011-R9A-SM-3NB1X GTEx Tissue Sample Gene Expression Profiles -1.0 -0.946846 CREB1_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null dentate gyrus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.60383 L363 CCLE Cell Line Gene Expression Profiles 1.0 1.52604 NCI-H2110 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 H3K4me3_lung_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null BCL3 ChEA Transcription Factor Targets 1.0 null Lung adenocarcinoma_LUAD_TCGA-75-6205-01A-11R-1755-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-56-7580-01A-11R-2045-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HS 294T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.21829 GTEX-SN8G-0001-SM-3NM8L GTEx Tissue Sample Gene Expression Profiles 1.0 1.79137 Prestwick-664-4275 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me3_Panc1_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null NCI-H1781 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.05058 BC-1 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 CEBPB_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_A549_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null end GeneRIF Biological Term Annotations 1.0 null abnormality of carbohydrate metabolism/homeostasis GWASdb SNP-Phenotype Associations 1.0 0.235335 p53dependent GeneRIF Biological Term Annotations 1.0 null BRD-K02241673 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.12584 abnormality of long bone morphology GWASdb SNP-Phenotype Associations 1.0 1.25845 GTEX-QMR6-0008-SM-447AV GTEx Tissue Sample Gene Expression Profiles 1.0 1.34315 BRD-K49029187 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.35282 CAOV4 CCLE Cell Line Gene CNV Profiles 1.0 1.48147 GTEX-TSE9-0011-R6A-SM-3DB7L GTEx Tissue Sample Gene Expression Profiles -1.0 -1.08668 H3K4me3_GM12878_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null CTCF_GM12865_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WL46-0011-R7A-SM-3LK7X GTEx Tissue Sample Gene Expression Profiles -1.0 -0.856803 RCOR1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XMD1-0011-R6A-SM-4AT5K GTEx Tissue Sample Gene Expression Profiles -1.0 -2.12894 M059K Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.2421 dexamethasone-123 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null WRNIP1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K57271749 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.1136 abnormality of the systemic arterial tree GWASdb SNP-Phenotype Associations 1.0 0.121858 outer CP in posteroinferior (ventral) parietal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.843776 MYC_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null abnormality of blood and blood-forming tissues GWASdb SNP-Phenotype Associations 1.0 0.137725 OAW28 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.50259 MYC_MCF-7_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null SETDB1 ENCODE Transcription Factor Targets 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2M6-06A-12R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K47535493 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.347 A-CA-04-2009(H1N1)_0Hour_None_GSE40844 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.3953 BRD-K41412255 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.53597 GTEX-XMD3-2326-SM-4AT5H GTEx Tissue Sample Gene Expression Profiles 1.0 0.872898 CTCF_brain microvascular endothelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K75041866 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.96914 BRD-K93374700 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.52753 promote GeneRIF Biological Term Annotations 1.0 null HCC60 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.128 MAZ_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null amygdaloid complex_16 pcw_M_12879 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.838268 MEG-01 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 KYSE-450 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 BRD-K02927989 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 4.02848 noncoding GeneRIF Biological Term Annotations 1.0 null Uterus BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -0.84507 GTEX-WH7G-0826-SM-4LVMR GTEx Tissue Sample Gene Expression Profiles -1.0 -2.11968 GTEX-T6MN-0011-R6A-SM-32QP8 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.923971 Lung squamous cell carcinoma_LUSC_TCGA-90-A4EE-01A-11R-A24Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-OHPK-0326-SM-2HMJO GTEx Tissue Sample Gene Expression Profiles -1.0 -1.64718 Acute Myeloid Leukemia_LAML_TCGA-AB-2872-03A-01T-0735-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCI-H1792 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.86377 GTEX-U3ZM-0008-SM-4DXTQ GTEx Tissue Sample Gene Expression Profiles 1.0 1.59074 Brain Lower Grade Glioma_LGG_TCGA-S9-A6UA-01A-12R-A33Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null abnormality of the forearm GWASdb SNP-Phenotype Associations 1.0 1.25845 TCF3_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-P44H-0011-R1A-SM-3NM8J GTEx Tissue Sample Gene Expression Profiles -1.0 -0.835085 Pheochromocytoma and Paraganglioma_PCPG_TCGA-SP-A6QF-01A-12R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2A_myocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-POMQ-1426-SM-3P61D GTEx Tissue Sample Gene Expression Profiles 1.0 1.08226 H3K4me3_Panc1_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_cardiac fibroblast_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_Jurkat_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null COLO-824 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 liver GTEx Tissue Gene Expression Profiles -1.0 -0.854847 GTEX-XYKS-1726-SM-4E3IO GTEx Tissue Sample Gene Expression Profiles 1.0 0.970502 Head and Neck squamous cell carcinoma_HNSC_TCGA-BA-A6DA-01A-31R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Brain Lower Grade Glioma_LGG_TCGA-HT-8011-01A-11R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_cardiac fibroblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4707-01A-01R-1277-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2A_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null primary motor cortex (area M1, area 4)_21 pcw_M_12886 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.838268 H3K4me3_B cell_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null SAP30_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null chrysin-6485 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null hypersensitivity reaction disease GWASdb SNP-Disease Associations 1.0 1.53058 BRD-K23728544 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.56691 VZ in superolateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.48786 outer CP in posteror frontal cortex (motor cortex) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.03924 MXI1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lymphoma_burkitts(Raji) BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 1.47609 CTCF_IMR-90_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_Caco-2_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H3K27me3_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ZEB1 ENCODE Transcription Factor Targets 1.0 null BRD-K86884344 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.1252 primary visual cortex (striate cortex, area V1/17)_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.42798 BRD-K68617666 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.58135 H3K4me3_kidney epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null RUNX3_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null cognitive disorder GWASdb SNP-Disease Associations 1.0 0.693072 GM133 BioGPS Cell Line Gene Expression Profiles 1.0 0.829535 primary visual cortex (striate cortex, area V1/17)_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.0384 lower limb region of M1 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.39029 Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A71E-01A-31R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-S4Q7-0003-SM-3NM8M GTEx Tissue Sample Gene Expression Profiles 1.0 2.49912 GTEX-T2IS-2926-SM-32QPO GTEx Tissue Sample Gene Expression Profiles -1.0 -2.30819 immune system disease GWASdb SNP-Disease Associations 1.0 0.175946 Brain Lower Grade Glioma_LGG_TCGA-S9-A7IS-01A-11R-A34F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CP66-MEL GDSC Cell Line Gene Expression Profiles -1.0 -2.16312 enilconazole-5113 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null MG-63 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.841189 Kidney renal papillary cell carcinoma_KIRP_TCGA-P4-A5E6-01A-11R-A28H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null omeprazole-2828 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null TAF1_GM12891_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null naloxone-2006 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null cingulum bundle, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -2.41568 MYC_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_NB4_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-R55F-1426-SM-2TF53 GTEx Tissue Sample Gene Expression Profiles 1.0 0.900943 GTEX-RTLS-1326-SM-46MUN GTEx Tissue Sample Gene Expression Profiles -1.0 -1.26059 GTEX-RU72-0011-R5A-SM-2TF6U GTEx Tissue Sample Gene Expression Profiles -1.0 -1.90976 TFAP2C-20629094-MCF7-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null NFATC1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null vincamine-3784 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null deferasirox_homo sapiens_gpl570_gds3558 GEO Signatures of Differentially Expressed Genes for Small Molecules -1.0 null SARS-CoV MA15_Day7-PFU-10^5_None_GSE33266 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 1.81791 MAZ_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-S7SE-2526-SM-2XCDL GTEx Tissue Sample Gene Expression Profiles -1.0 -1.13152 H3K4me3_heart_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-WVLH-0011-R11A-SM-3MJFO GTEx Tissue Sample Gene Expression Profiles -1.0 -2.89867 BRD-K43390655 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.15136 GTEX-XMD1-0826-SM-4AT52 GTEx Tissue Sample Gene Expression Profiles 1.0 0.961911 hippocampus (hippocampal formation)_21 pcw_M_12886 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.907603 H3K4me3_fibroblast of villous mesenchyme_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Pheochromocytoma and Paraganglioma_PCPG_TCGA-SR-A6MV-01A-11R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTBP2_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null posterior (caudal) superior temporal cortex (area 22c)_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.940869 ETS1_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null DMS 79 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.39815 H3K4me3_brain microvascular endothelial cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null KMS-12-BM Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.15791 TAF1_SK-N-SH_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-VUSG-1726-SM-4KKZL GTEx Tissue Sample Gene Expression Profiles 1.0 2.9347 matrix GeneRIF Biological Term Annotations 1.0 null phenotypic abnormality GWASdb SNP-Phenotype Associations 1.0 0.442843 PML_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PNU-0230031-4291 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null HDAC6_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BCL11A ENCODE Transcription Factor Targets 1.0 null connective tissue disease GWASdb SNP-Disease Associations 1.0 0.257402 H3K4me1_CH12.LX_mm9_4 ENCODE Histone Modification Site Profiles 1.0 null GATA3_T47D_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null acacetin-4324 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null CTCF_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27me3_cardiac mesoderm_hg19_6 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27me3_iPS-20b Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Rectum adenocarcinoma_READ_TCGA-EI-6885-01A-11R-1928-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SIX5_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_H54_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BATF ENCODE Transcription Factor Targets 1.0 null diphenhydramine-1708 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-6023-01A-11R-1686-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ATF2 ENCODE Transcription Factor Targets 1.0 null VZ in lateral temporal-occipital cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.959962 TCF7L2_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XOTO-2826-SM-4B65I GTEx Tissue Sample Gene Expression Profiles 1.0 0.915419 liver disease GWASdb SNP-Disease Associations 1.0 0.744948 5248896-955 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null proguanil-5506 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Monoclonal gammopathy of undetermined significance (MGUS)_Bone Marrow_GSE5900 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 1.41886 BRD-K04875192 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.02375 BRD-K10776934 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.16019 NCI-H716 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 MYOG_myocyte_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null nephropathy GeneRIF Biological Term Annotations 1.0 null BRD-K84673192 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.22258 NCIH1618 CCLE Cell Line Gene Expression Profiles -1.0 -2.14817 JJN-3 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 retroparafascicular area of thalamus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.980239 TAF7 ENCODE Transcription Factor Targets 1.0 null hematologic cancer GWASdb SNP-Disease Associations 1.0 0.296647 posterior (caudal) superior temporal cortex (area 22c)_18 yrs_M_12984 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.33516 abnormality of lipid metabolism GWASdb SNP-Phenotype Associations 1.0 1.02289 dactinomycin_mus musculus_gpl1261_wild type_gds2456 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null pancuronium bromide-4570 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me1_cortical plate_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-S7SF-0008-SM-3NM8T GTEx Tissue Sample Gene Expression Profiles 1.0 1.56541 EBF1 ENCODE Transcription Factor Targets 1.0 null H3K4me3_fibroblast of lung_hg19_6 ENCODE Histone Modification Site Profiles 1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2811-03B-01T-0760-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-XMD1-0011-R1A-SM-4AT4C GTEx Tissue Sample Gene Expression Profiles -1.0 -1.39913 Prostate adenocarcinoma_PRAD_TCGA-HC-7752-01A-11R-2118-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_fibroblast of lung_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null YY1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SJCRH30 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.10523 Prostate adenocarcinoma_PRAD_TCGA-XQ-A8TA-01A-11R-A36G-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-PWCY-0526-SM-2I3ER GTEx Tissue Sample Gene Expression Profiles -1.0 -1.08701 GTEX-XBEC-1326-SM-4AT69 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.920139 GTEX-REY6-2126-SM-48FD9 GTEx Tissue Sample Gene Expression Profiles 1.0 1.67579 GTEX-QV31-0008-SM-447AT GTEx Tissue Sample Gene Expression Profiles 1.0 1.30452 H3K4me3_iPS DF 6.9 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null EGR1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null DMS 273 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.54994 H3K4me3_fibroblast of lung_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Uterine Carcinosarcoma_UCS_TCGA-N8-A56S-01A-11R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null COLO 320DM Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.29889 aggressive GeneRIF Biological Term Annotations 1.0 null BRD-K47254434 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.24955 BRD-K57195030 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.01563 YY1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCIH1975 CCLE Cell Line Gene CNV Profiles 1.0 1.60127 CORL23 CCLE Cell Line Gene CNV Profiles 1.0 1.92533 GTEX-OOBK-0008-SM-3NB27 GTEx Tissue Sample Gene Expression Profiles 1.0 1.01605 subiculum, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.96086 POLR2A_NB4_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null E2F6_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CEBPB_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me2_B cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null etoposide_mus musculus_gpl6887_gse33626 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null mRNA_SOX9_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells -1.0 null abnormality of nervous system physiology GWASdb SNP-Phenotype Associations 1.0 0.156542 GTEX-XOTO-2926-SM-4B65G GTEx Tissue Sample Gene Expression Profiles -1.0 -1.29532 EZH2_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-NPJ8-1926-SM-3MJGB GTEx Tissue Sample Gene Expression Profiles 1.0 0.888319 TAF1_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K15350548 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.75886 BRD-K92701606 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.1259 GTEX-XXEK-1226-SM-4BRUY GTEx Tissue Sample Gene Expression Profiles 1.0 0.848916 BRD-K76900919 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.01621 primary visual cortex (striate cortex, area V1/17)_13 pcw_F_12834 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.04098 sin3a_22783022_mcf7_lof_human_gpl570_gds4388 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations -1.0 -0.220983 lower respiratory tract disease GWASdb SNP-Disease Associations 1.0 0.198932 central gray of the pons, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.864167 17875932-TableS4 GeneSigDB Published Gene Signatures 1.0 null GTEX-XOT4-1126-SM-4B66E GTEx Tissue Sample Gene Expression Profiles -1.0 -0.826826 GTEX-WY7C-0526-SM-3NB3D GTEx Tissue Sample Gene Expression Profiles -1.0 -0.878886 CTCF_SK-N-SH_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WFJO-0008-SM-4LVN7 GTEx Tissue Sample Gene Expression Profiles 1.0 1.31017 abnormality of the uvea GWASdb SNP-Phenotype Associations 1.0 0.352948 type 2 diabetes mellitus GWASdb SNP-Disease Associations 1.0 1.10764 POLR2AphosphoS5_HL-60_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SPI1 ENCODE Transcription Factor Targets 1.0 null H3K9ac_Duodenum Mucosa Roadmap Epigenomics Histone Modification Site Profiles 1.0 null CPCN CCLE Cell Line Gene Expression Profiles 1.0 1.83105 MAX_H1-hESC_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XMD1-0011-R11A-SM-4AT5J GTEx Tissue Sample Gene Expression Profiles -1.0 -2.89867 BRD-A38066207 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.06226 TE9 CCLE Cell Line Gene CNV Profiles 1.0 1.37241 GTEX-QDVJ-0008-SM-48U2E GTEx Tissue Sample Gene Expression Profiles 1.0 2.2357 GTEX-W5WG-0008-SM-4KL25 GTEx Tissue Sample Gene Expression Profiles 1.0 1.19802 GR-M Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.13915 Skin Cutaneous Melanoma_SKCM_TCGA-ER-A42H-01A-11R-A24X-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K82671459 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.50095 CHD1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-SNU-16 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 immune GAD High Level Gene-Disease Associations 1.0 0.310806 anabasine-6074 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-XOT4-0726-SM-4GIAW GTEx Tissue Sample Gene Expression Profiles 1.0 0.92544 SCL-21571218-MEGAKARYOCYTES-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null BRD-K46413323 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.75178 GTEX-Q2AG-0008-SM-48U2K GTEx Tissue Sample Gene Expression Profiles 1.0 0.982131 H3K4me3_epithelial cell of proximal tubule_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_mononuclear cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null CEBPB_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-O5YW-0326-SM-2I5EI GTEx Tissue Sample Gene Expression Profiles -1.0 -1.62257 H2AFZ_skeletal muscle myoblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-OXRN-0011-R5A-SM-2I5EF GTEx Tissue Sample Gene Expression Profiles -1.0 -0.854723 H3K4me3_brain_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_olfactory bulb_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null compared GeneRIF Biological Term Annotations 1.0 null BRD-K17427497 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.07633 H3K27ac_astrocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null VZ in ventrolateral prefrontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.86375 YKG1 CCLE Cell Line Gene Expression Profiles -1.0 -1.47076 501A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.18341 MITF-21258399-MELANOMA-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null tamoxifen_homo sapiens_gpl570_gds4095 GEO Signatures of Differentially Expressed Genes for Small Molecules -1.0 null BRD-K19389825 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.00076 BRD-K19011391 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.3873 BRD-K87167435 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.94273 GTEX-U412-2026-SM-4DXSI GTEx Tissue Sample Gene Expression Profiles 1.0 0.858613 outer CP in caudal perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.79585 nifedipine-1692 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null ELF1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4882-01A-02R-1426-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null alsterpaullone-7051 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-WFG7-0426-SM-4LMK5 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.9842 GTEX-XK95-0426-SM-4AT4R GTEx Tissue Sample Gene Expression Profiles 1.0 0.861815 disease of cellular proliferation GWASdb SNP-Disease Associations 1.0 0.155764 Acute Myeloid Leukemia_LAML_TCGA-AB-2913-03A-01T-0734-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K27ac_HepG2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null HCC33 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.78495 hypertension GWASdb SNP-Disease Associations 1.0 0.928472 niflumic acid-5071 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-U4B1-0008-SM-4DXUW GTEx Tissue Sample Gene Expression Profiles 1.0 0.952333 GTEX-NFK9-1626-SM-3LK5J GTEx Tissue Sample Gene Expression Profiles -1.0 -1.28349 alpha-yohimbine-6274 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H2BK20ac_IMR90 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GTEX-T2IS-0011-R11A-SM-32QPC GTEx Tissue Sample Gene Expression Profiles -1.0 -2.18194 OV-90 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.907754 Mesothelioma HuGE Navigator Gene-Phenotype Associations 1.0 null sclerosis of hand bone GWASdb SNP-Phenotype Associations 1.0 1.25845 5255229-833 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null SIN3A_PFSK-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null TCF3 ENCODE Transcription Factor Targets 1.0 null Prostate adenocarcinoma_PRAD_TCGA-HC-8265-01A-11R-2263-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null EP300_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null rearrangement GeneRIF Biological Term Annotations 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A1M9-01A-11R-A13Y-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MYC_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K24711162 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.13789 tcof1_15522210_neuroblastoma_lof_mouse_gpl339_gds998 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.091785 disease of mental health GWASdb SNP-Disease Associations 1.0 0.122248 CCNT2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null inferolateral temporal cortex (area TEv, area 20)_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.48561 H3K4me3_heart_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Sarcoma_SARC_TCGA-HS-A5N9-01A-11R-A26T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K27ac_HCT116_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_fibroblast of skin of abdomen_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null striatum_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.09282 LIVF001-017 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.66508 BMI1 ChEA Transcription Factor Targets 1.0 null H3K4me3_HCT116_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-05-4422-01A-01R-1206-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K25330450 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.23551 EZH2_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RELA_GM19099_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAFF_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K01787291 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 4.31183 TAF1_PFSK-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-X261-0011-R6B-SM-4E3J8 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.76339 arteriosclerosis GWASdb SNP-Phenotype Associations 1.0 1.25845 NCI-H187 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -3.57932 intracellular organelle LOCATE Predicted Protein Localization Annotations 1.0 null H3K4me3_LNCaP clone FGC_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null YY1_K562_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_limb_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null oculomotor nuclear complex, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.908635 tissues GeneRIF Biological Term Annotations 1.0 null BRD-K76588804 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 4.7715 Sarcoma_SARC_TCGA-WK-A8XO-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SK-N-DZ Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.29298 parolfactory gyri, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.2172 iocetamic acid-4425 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null VZ in septal region Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.88446 TET1 ChEA Transcription Factor Targets 1.0 null NCI-H1155 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.43764 GTEX-PWCY-1326-SM-48TCU GTEx Tissue Sample Gene Expression Profiles 1.0 1.21518 BRD-K60701773 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.15137 pineal body Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.41143 MAX_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NUGC-4 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.96096 rheumatoid arthritis GWASdb SNP-Phenotype Associations 1.0 0.641983 BRD-K68463857 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.50702 MXI1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ZR-75-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.01691 Acute Myeloid Leukemia_LAML_TCGA-AB-2857-03A-01T-0736-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TC-71 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.878065 report GeneRIF Biological Term Annotations 1.0 null hydroxyachillin-4213 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null POLR2A_A549_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null OACP4C COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 GTEX-X15G-1626-SM-3NMB3 GTEx Tissue Sample Gene Expression Profiles 1.0 0.836064 renal GAD High Level Gene-Disease Associations 1.0 0.295739 CL-11 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.91162 BRD-K63277230 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.05227 RERF-GC-1B Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.36779 BHT101 CCLE Cell Line Gene CNV Profiles 1.0 1.43212 GTEX-N7MS-0011-R7a-SM-2HMKN GTEx Tissue Sample Gene Expression Profiles -1.0 -0.833988 CREB1_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null primary auditory cortex (core)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.29923 NCI-SNU-16 GDSC Cell Line Gene Expression Profiles 1.0 2.01768 BRD-K55414200 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.54841 TAF1_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null abnormality of the head GWASdb SNP-Phenotype Associations 1.0 0.251361 SC-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.01498 hippocampus (hippocampal formation)_23 yrs_M_12300 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.2155 GTEX-QVJO-0008-SM-447AU GTEx Tissue Sample Gene Expression Profiles 1.0 1.66498 BRD-K45813167 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.85055 GATA2 ChEA Transcription Factor Targets 1.0 null NFIC_SK-N-SH_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null E2F4_MCF 10A_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TP53 ChEA Transcription Factor Targets 1.0 null kanamycin-3224 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me3_H1 Derived Neuronal Progenitor Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null cerebellar cortex_37 yrs_M_12303 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.48561 karakoline-4297 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null primary motor-sensory cortex (samples)_8 pcw_M_13058 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.04098 overexpressed GeneRIF Biological Term Annotations 1.0 null GTEX-XMD1-2826-SM-4AT5F GTEx Tissue Sample Gene Expression Profiles -1.0 -1.09191 GTEX-WYJK-1026-SM-3NM8W GTEx Tissue Sample Gene Expression Profiles -1.0 -0.980738 U-698-M Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.891318 pancreatic adenocarcinoma GWASdb SNP-Phenotype Associations 1.0 0.859619 H3K9me3_fibroblast of dermis_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null ZNF263 ENCODE Transcription Factor Targets 1.0 null VZ in medial temporal-occipital cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.16958 cmyc GeneRIF Biological Term Annotations 1.0 null BRD-K52123140 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.30761 Prostate adenocarcinoma_PRAD_TCGA-VN-A88M-01A-11R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null harmine-7209 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Brain Lower Grade Glioma_LGG_TCGA-HT-7857-01A-11R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K26620362 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 5.72341 POLR2A_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null REST_myocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null cefamandole-7394 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Hypertension dbGAP Gene-Trait Associations 1.0 0.267772 H3K4me1_bone marrow_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null eGFP-GATA2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-T6MN-0011-R5A-SM-32QPD GTEx Tissue Sample Gene Expression Profiles -1.0 -1.03315 Carcinoma, Hepatocellular CTD Gene-Disease Associations 1.0 1.05573 H3K4me3_fibroblast of dermis_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null arterial stenosis GWASdb SNP-Phenotype Associations 1.0 0.221944 SKMM2 CCLE Cell Line Gene CNV Profiles -1.0 -1.66388 MOLP-8 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.07359 Gout HuGE Navigator Gene-Phenotype Associations 1.0 null H3K4me3_cardiac mesoderm_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Adipocyte BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 1.11965 BRD-K51017127 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.40471 BRD-K71544970 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.48574 GTEX-U412-0008-SM-4DXTE GTEx Tissue Sample Gene Expression Profiles 1.0 0.853727 H3K27ac_testis_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_GM18951_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WFON-0001-SM-3P61W GTEx Tissue Sample Gene Expression Profiles 1.0 1.71725 KNS-81-FD GDSC Cell Line Gene Expression Profiles -1.0 -1.88061 MEF2A ENCODE Transcription Factor Targets 1.0 null KYM1 CCLE Cell Line Gene CNV Profiles -1.0 -1.48383 H3K4me2_myocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null genomic GeneRIF Biological Term Annotations 1.0 null Lung adenocarcinoma_LUAD_TCGA-75-6207-01A-11R-1755-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null occipital neocortex_8 pcw_M_13058 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.07009 Lung squamous cell carcinoma_LUSC_TCGA-60-2726-01A-01R-0851-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K46155894 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.09884 midbrain reticular formation, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.1096 SG in rostral entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.946028 TAF1_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null autoimmunity GWASdb SNP-Phenotype Associations 1.0 0.39272 BRD-K88542817 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.15628 GTEX-XMD1-0011-R5A-SM-4AT47 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.826514 BRD-K62007935 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.08428 gain GeneRIF Biological Term Annotations 1.0 null HCC1937 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 Kidney renal papillary cell carcinoma_KIRP_TCGA-P4-A5ED-01A-11R-A28H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HGC-27 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 H3K4me3_cardiac mesoderm_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null SIN3A_PFSK-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EP300_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H4K91ac_H9 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null KDM1A ENCODE Transcription Factor Targets 1.0 null pilocarpine-6741 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null FOSL2_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K75051049 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.01628 HGC27 CCLE Cell Line Gene CNV Profiles 1.0 1.64941 H3K9ac_skeletal muscle myoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-P78B-1926-SM-3P616 GTEx Tissue Sample Gene Expression Profiles 1.0 1.14454 GTEX-PX3G-0826-SM-48TZS GTEx Tissue Sample Gene Expression Profiles -1.0 -0.853702 BRD-K23442578 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.40697 caudal ganglionic eminence_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.43861 BRD-K13225050 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.3405 BRD-K14266419 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.09231 Acute Myeloid Leukemia_LAML_TCGA-AB-2897-03A-01T-0735-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null brain disease GWASdb SNP-Disease Associations 1.0 0.156525 Kidney renal clear cell carcinoma_KIRC_TCGA-B8-4143-01A-01R-1188-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null patchy osteosclerosis GWASdb SNP-Phenotype Associations 1.0 1.25845 Ebolavirus(ZEBOV)_6hr_Macrophage_22028943_GSE31747 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 2.43695 thioperamide-3055 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null N-acetyl-4-benzoquinoneimine CTD Gene-Chemical Interactions 1.0 null COR-L47 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -2.01125 WIDR Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.901749 riluzole-7365 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null SMARCB1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null inferolateral temporal cortex (area TEv, area 20)_18 yrs_M_12984 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.872515 HS683 CCLE Cell Line Gene Expression Profiles -1.0 -1.57309 SNU1272 CCLE Cell Line Gene CNV Profiles -1.0 -1.75571 anomaly of the limb diaphyses GWASdb SNP-Phenotype Associations 1.0 1.25845 abnormality of the abdominal organs GWASdb SNP-Phenotype Associations 1.0 0.147773 BRD-K28433349 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.27757 Liver hepatocellular carcinoma_LIHC_TCGA-DD-A3A7-01A-11R-A22L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-TML8-0001-SM-3NMAF GTEx Tissue Sample Gene Expression Profiles 1.0 1.11785 Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7JS-01A-11R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MXI1_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NFE2L2-22581777-LYMPHOBLASTOID-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null E2F6_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null carboplatin LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.57488 BRD-K41044903 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.74545 cholelithiasis GWASdb SNP-Phenotype Associations 1.0 0.563675 GTEX-WL46-0626-SM-3LK7R GTEx Tissue Sample Gene Expression Profiles -1.0 -1.03898 cdkn2a2b GeneRIF Biological Term Annotations 1.0 null BRD-K96817767 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 4.01678 NCI-H810 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 GTEX-XMK1-0326-SM-4B652 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.15443 19621087-Table1a GeneSigDB Published Gene Signatures 1.0 null GATA3 ENCODE Transcription Factor Targets 1.0 null GTEX-R55E-0526-SM-2TC6B GTEx Tissue Sample Gene Expression Profiles -1.0 -1.28392 GTEX-XMK1-0001-SM-4B64F GTEx Tissue Sample Gene Expression Profiles 1.0 1.4188 BRD-K54538111 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.26036 CEBPB_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K28924192 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.3307 H3K4me3_BJ_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null ikarugamycin-974 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-R55E-0011-R6A-SM-2TC5T GTEx Tissue Sample Gene Expression Profiles -1.0 -2.89867 BRD-K50474387 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.15072 H3K4me3_SK-N-MC_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null variant GeneRIF Biological Term Annotations 1.0 null H3K4me1_G1E-ER4_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null NCI-H2170 GDSC Cell Line Gene Expression Profiles 1.0 3.60177 dexamethasone_homo sapiens_gpl4133_gse42619 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null ACHN BioGPS Cell Line Gene Expression Profiles -1.0 -1.89271 GTEX-U3ZG-0001-SM-47JYF GTEx Tissue Sample Gene Expression Profiles 1.0 1.36614 GTEX-T6MO-1126-SM-4DM5D GTEx Tissue Sample Gene Expression Profiles 1.0 0.936436 GTEX-XBEW-0002-SM-4AT5O GTEx Tissue Sample Gene Expression Profiles 1.0 1.39241 H3K4me3_Penis Foreskin Keratinocyte Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null estropipate-6068 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null cerebellar cortex_17 pcw_F_12880 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.09282 BRD-A04231641 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.86165 BRD-K38417094 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.99846 POLR2AphosphoS5_HCT116_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_WERI-Rb-1_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null TBL1XR1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null OVMANA Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.25063 reticular nucleus of thalamus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.29461 abnormality of the abdomen GWASdb SNP-Phenotype Associations 1.0 0.163681 ZKSCAN1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-QLQW-0326-SM-447A8 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.03234 isocorydine-6843 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null subparafascicular nucleus of thalamus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.02416 K-562 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.01175 long GeneRIF Biological Term Annotations 1.0 null GTEX-Q2AG-0011-R1A-SM-2HMJI GTEx Tissue Sample Gene Expression Profiles -1.0 -0.910951 AHR-22903824-MCF7-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null RCOR1 ENCODE Transcription Factor Targets 1.0 null BRD-K09258973 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.07492 juvenile rheumatoid arthritis GWASdb SNP-Disease Associations 1.0 0.900854 POLR2AphosphoS5_Panc1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K33064989 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.20944 rostral division of OFCi (area 11) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.980893 H2AFZ_myotube_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PANC-08-13 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 BRD-K92134254 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.0041 CA3 field, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.64995 acquired metabolic disease GWASdb SNP-Disease Associations 1.0 0.32656 BRD-K52259096 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.09002 CHL-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.12337 GTEX-SE5C-0008-SM-4B64J GTEx Tissue Sample Gene Expression Profiles 1.0 1.00684 Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4811-01A-01R-1503-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null frequency GeneRIF Biological Term Annotations 1.0 null H3K4me3_K562_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null FU97 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.21643 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A45Q-01A-11R-A24H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-QDT8-0011-R2A-SM-32PKQ GTEx Tissue Sample Gene Expression Profiles -1.0 -0.912592 TFAP2A ENCODE Transcription Factor Targets 1.0 null BRD-K48299239 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.1292 carbohydrate metabolism disease GWASdb SNP-Disease Associations 1.0 0.338117 BRD-K64700664 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.21731 Skin Cutaneous Melanoma_SKCM_TCGA-RP-A6K9-06A-41R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_fibroblast of pedal digit skin_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NFATC1 ENCODE Transcription Factor Targets 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4901-01A-01R-1426-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null 17975224-TableS6 GeneSigDB Published Gene Signatures 1.0 null mir12075p GeneRIF Biological Term Annotations 1.0 null vincamine-4341 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null MEF2A_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K65107903 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 4.32442 BRD-K68086276 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.35593 H3K4me3_WI38_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null BRD-K93774122 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.35851 H3K4me1_mononuclear cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null caudal prosubiculum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.990221 EFM-192C Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.34329 FLI1 ChEA Transcription Factor Targets 1.0 null BRD-K34382498 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.0079 H3K4me3_MEL cell line_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null mRNA_DLX3_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells -1.0 null primary visual cortex (striate cortex, area V1/17)_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.14202 H3K27me3_cardiac mesoderm_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K9ac_H1-hESC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null corticosterone-4064 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K79me1_IMR90 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null POLR2A_HepG2_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null YY1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null AU565 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 H3K4me3_HEK293_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-S4P3-0008-SM-3NM8R GTEx Tissue Sample Gene Expression Profiles 1.0 1.37406 MYC_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ASH-3 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 frontal pole, left, medial aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.953791 hycanthone-3229 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null humeral sclerosis GWASdb SNP-Phenotype Associations 1.0 1.25845 psych GAD High Level Gene-Disease Associations 1.0 0.298214 TASK1 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 globus pallidus, external segment, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.68571 GTEX-XXEK-0004-SM-4BRWO GTEx Tissue Sample Gene Expression Profiles 1.0 1.43449 psychosis GWASdb SNP-Phenotype Associations 1.0 0.969142 BHT-101 GDSC Cell Line Gene Expression Profiles 1.0 1.6736 FLI1-21571218-MEGAKARYOCYTES-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null POU2F2_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K46620987 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.1727 abnormality of the respiratory system GWASdb SNP-Phenotype Associations 1.0 0.155158 RELA_GM18951_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null sclerotic forearm bones GWASdb SNP-Phenotype Associations 1.0 1.25845 MAX_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WH7G-1726-SM-4LVKY GTEx Tissue Sample Gene Expression Profiles 1.0 1.48007 GTEX-N7MS-2526-SM-2D7W3 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.35606 primary somatosensory cortex (area S1, areas 3,1,2)_10 mos_M_12977 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.09613 Pheochromocytoma and Paraganglioma_PCPG_TCGA-RT-A6YA-01A-12R-A35K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K46014293 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.29242 ZR-75-30 GDSC Cell Line Gene Expression Profiles 1.0 1.45609 H4K20me1_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_erythroblast_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null E2F1 ENCODE Transcription Factor Targets 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-FV-A4ZP-01A-12R-A266-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null copy GeneRIF Biological Term Annotations 1.0 null NELFE_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GR MotifMap Predicted Transcription Factor Targets 1.0 null GTEX-WFG8-0626-SM-3GILJ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.42057 GTEX-T2IS-2626-SM-32QPP GTEx Tissue Sample Gene Expression Profiles -1.0 -0.899382 BRD-K14813771 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.43152 BRD-K91241684 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.07115 POLR2AphosphoS2_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Pheochromocytoma and Paraganglioma_PCPG_TCGA-RW-A68G-01A-11R-A35K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BJAB Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.46908 BRD-K82224868 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.4345 bmi1_17452456_medulloblastoma_lof_human_gpl570_gds2724 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.56274 H2AFZ_CD14-positive monocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTF2F1_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H2AFZ_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null kidney failure GWASdb SNP-Disease Associations 1.0 0.430311 ELK1 ENCODE Transcription Factor Targets 1.0 null BHLHE40_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF ENCODE Transcription Factor Targets 1.0 null BRD-K27058632 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.61586 BRD-K77869482 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.12177 KDM5B_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-RWSA-0726-SM-2XCBE GTEx Tissue Sample Gene Expression Profiles -1.0 -1.00752 YY1_SK-N-SH_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null sclerosis of foot bone GWASdb SNP-Phenotype Associations 1.0 1.25845 c-MYC_KD_GDS2526_110_human_BT-474 BREAST CANCER cell line GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null NCI-N417 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.51245 Lung squamous cell carcinoma_LUSC_TCGA-37-4132-01A-01R-1100-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZNF143_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-UTHO-0011-R6A-SM-3GIJW GTEx Tissue Sample Gene Expression Profiles -1.0 -0.917445 etidronic acid-4564 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null POLR2A_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null renal insufficiency GWASdb SNP-Phenotype Associations 1.0 0.413807 patchy sclerosis of radial diaphysis GWASdb SNP-Phenotype Associations 1.0 1.25845 MKN-74 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.854855 Crus II, right, lateral hemisphere Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.21404 PHF8 ENCODE Transcription Factor Targets 1.0 null RCOR3-21632747-MESC-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null POLR2A_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null RUNX1 ChEA Transcription Factor Targets 1.0 null intracellular membrane-bounded organelle LOCATE Predicted Protein Localization Annotations 1.0 null GTEX-WL46-2826-SM-3LK81 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.58767 SNU-719 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.899367 inner SZ in posterior parahippocampal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -2.16589 H3K4me1_HeLa-S3_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null TAF1_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null nausea and vomiting GWASdb SNP-Phenotype Associations 1.0 0.688736 NFIC_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ZEB1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null RAD21_IMR-90_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null mechanisms GeneRIF Biological Term Annotations 1.0 null superficial layers of caudal presubiculum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.82908 BRD-K01237500 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.89388 H3K4me3_foreskin fibroblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null EZH2_mammary epithelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null P12-ICHIKAWA GDSC Cell Line Gene Expression Profiles -1.0 -2.82617 PC-3 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 VZ in posterosuperior (dorsal) parietal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.11557 Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4912-01A-01R-1426-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_CD14-positive monocyte_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null IRF4_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null IRF1 ENCODE Transcription Factor Targets 1.0 null SNU-16 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.75637 GTEX-WWYW-0011-R11A-SM-3NB38 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.42385 KMS21BM CCLE Cell Line Gene Expression Profiles 1.0 1.89528 neoplasm by anatomical site GWASdb SNP-Phenotype Associations 1.0 0.171759 BRD-K04704273 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.31186 metitepine-6312 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H2AFZ_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null atherosclerosis GWASdb SNP-Phenotype Associations 1.0 0.281883 BRD-K08416880 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.58297 Nephrolithiasis HuGE Navigator Gene-Phenotype Associations 1.0 null NCIH1092 CCLE Cell Line Gene Expression Profiles -1.0 -2.0868 pizotifen-5072 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null malignant GeneRIF Biological Term Annotations 1.0 null GATA1-21571218-MEGAKARYOCYTES-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null abnormality of leukocytes GWASdb SNP-Phenotype Associations 1.0 0.089434 GTEX-R55E-0011-R11A-SM-2TC6I GTEx Tissue Sample Gene Expression Profiles -1.0 -1.84013 Sarcoma_SARC_TCGA-JV-A75J-01A-11R-A32Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cytoplasmic part LOCATE Predicted Protein Localization Annotations 1.0 null coronary artery disease GWASdb SNP-Disease Associations 1.0 0.623422 systemic lupus erythematosus GWASdb SNP-Phenotype Associations 1.0 0.739827 BRD-K31337291 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.07254 reproductive system disease GWASdb SNP-Disease Associations 1.0 0.135936 neurodegenerative disease GWASdb SNP-Disease Associations 1.0 0.466554 SG in caudal entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.30947 POLR2A_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null abnormality of the vasculature GWASdb SNP-Phenotype Associations 1.0 0.208845 BRD-K45398957 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.44591 abnormality of the metaphyses GWASdb SNP-Phenotype Associations 1.0 1.25845 H3K4me1_thymus_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null BRD-K63626200 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.39353 LU-65 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 H3K9me3_G1E_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null ZNF384_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K98704738 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.65265 RELA_GM15510_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null X, left, paravermis Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.57473 cisplatin_mus musculus_gpl339_gse6206 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null sulfadiazine-1688 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null USF2_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-A09115727 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.15293 BRD-K85401814 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.25905 GTEX-OHPK-2426-SM-3MJGH GTEx Tissue Sample Gene Expression Profiles 1.0 1.03591 demyelinating disease GWASdb SNP-Disease Associations 1.0 1.43537 Pancreatic adenocarcinoma_PAAD_TCGA-US-A779-01A-11R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TAF7_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_Colon Smooth Muscle Roadmap Epigenomics Histone Modification Site Profiles 1.0 null BRD-K66539236 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.46209 HCC1395 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 POLR2A_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null neoplasm of the pancreas GWASdb SNP-Phenotype Associations 1.0 0.859619 GTEX-PWCY-0008-SM-48TE9 GTEx Tissue Sample Gene Expression Profiles 1.0 1.33919 GTEX-T5JC-2326-SM-32PMR GTEx Tissue Sample Gene Expression Profiles -1.0 -2.89867 mRNA_JARID2_20075857 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells -1.0 null thiocolchicoside-1726 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null BRD-K63579322 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.25646 primary auditory cortex (core)_16 pcw_M_12879 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.91372 furaltadone-4313 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null CEBPB_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAFK_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null disease of anatomical entity GWASdb SNP-Disease Associations 1.0 0.155884 harmine-5855 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null ETS2 MotifMap Predicted Transcription Factor Targets 1.0 null GFI1B ChEA Transcription Factor Targets 1.0 null MC-IXC COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 BRD-K95740363 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.14733 GTEX-UJHI-1226-SM-4IHLR GTEx Tissue Sample Gene Expression Profiles 1.0 0.961075 NCI-H1792 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 BRD-K25757432 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.78147 risk GeneRIF Biological Term Annotations 1.0 null H3K4me3_CD19 Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null pleural mesothelioma GWASdb SNP-Phenotype Associations 1.0 1.01655 tetrahydroalstonine-2748 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null TFAP2A_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-DU-A5TY-01A-11R-A28M-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K89584810 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.02544 NCI-H1395 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.846705 CP-690334-01-4380 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-PX3G-1026-SM-48TZW GTEx Tissue Sample Gene Expression Profiles -1.0 -1.26011 H3K79me1_H9 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null H3K4me3_megakaryocyte_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_WERI-Rb-1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null IX, right, paravermis Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.02985 motor nucleus of trigeminal nerve Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.52886 STAT4-19710469-TH1 cell mouse-mouse ChEA Transcription Factor Binding Site Profiles 1.0 null BRD-K41604824 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.01331 ACHN Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.96096 HCC1419 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 lateral tuberal nuclei Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.897384 ZNF217 ChEA Transcription Factor Targets 1.0 null ELF1_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HUH6 CCLE Cell Line Gene Expression Profiles -1.0 -1.68151 vacuole LOCATE Predicted Protein Localization Annotations 1.0 null SIN3A ENCODE Transcription Factor Targets 1.0 null GTEX-WZTO-0826-SM-3NM8Q GTEx Tissue Sample Gene Expression Profiles -1.0 -0.830296 TEAD4_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CHD2_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_H1-hESC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-Q734-0726-SM-48TZP GTEx Tissue Sample Gene Expression Profiles 1.0 1.01856 A-375 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.929314 crc GeneRIF Biological Term Annotations 1.0 null H3K4me3_skeletal muscle cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K27me3_small intestine_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H820 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.82638 Drug-Induced Liver Injury CTD Gene-Disease Associations 1.0 1.4966 EFM-192A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.2205 BRD-K18763924 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.34441 abnormal GeneRIF Biological Term Annotations 1.0 null NCI-H847 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.96511 H3K27ac_spleen_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-18-3421-01A-01R-0980-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null LNZ308 CCLE Cell Line Gene Expression Profiles -1.0 -1.87692 vertebral body sclerosis GWASdb SNP-Phenotype Associations 1.0 1.25845 GTEX-QMR6-0011-R2A-SM-32PKV GTEx Tissue Sample Gene Expression Profiles -1.0 -1.48393 BRD-K14599588 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.34416 nabumetone-5428 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null STAT3_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-TSE9-0011-R11A-SM-3DB7N GTEx Tissue Sample Gene Expression Profiles -1.0 -1.42738 BRD-K63547380 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.10388 GTEX-QVUS-2926-SM-3GIJB GTEx Tissue Sample Gene Expression Profiles -1.0 -2.4608 Prostate adenocarcinoma_PRAD_TCGA-2A-A8VX-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_endothelial cell of umbilical vein_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-U3ZN-0008-SM-4DXTL GTEx Tissue Sample Gene Expression Profiles 1.0 0.880437 TET1-21451524-MESC-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null NCI-H1092 GDSC Cell Line Gene Expression Profiles -1.0 -1.65563 COV318 CCLE Cell Line Gene Expression Profiles -1.0 -2.03652 SW 527 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.5472 chimeric GeneRIF Biological Term Annotations 1.0 null E2F3_UP.V1 MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations -1.0 null Hodgkin Disease CTD Gene-Disease Associations 1.0 2.88009 BRD-K40219231 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.24114 SW620 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 sirolimus-7001 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null TC-71 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.07985 ketoprofen-4286 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null abnormality of the skeletal system GWASdb SNP-Phenotype Associations 1.0 0.443003 NCI-H2170 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 2.41252 H3K4me3_astrocyte of the spinal cord_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_HepG2_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EK-A2RK-01A-11R-A18M-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K26709432 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.8345 IRF4 ENCODE Transcription Factor Targets 1.0 null BRD-K78886448 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.60873 H3K4me3_choroid plexus epithelial cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null 17483317-TableS5 GeneSigDB Published Gene Signatures 1.0 null primary motor-sensory cortex (samples)_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 2.92126 NCI-H460 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.15711 POLR2A_GM12892_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-SNOS-0008-SM-4DM6I GTEx Tissue Sample Gene Expression Profiles 1.0 1.59795 POU2F2_GM12891_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K73795883 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.65745 TCF12_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAZ ENCODE Transcription Factor Targets 1.0 null NCIH1792 CCLE Cell Line Gene Expression Profiles 1.0 2.10663 harman-4584 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null EFM-192A COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 GTEX-WRHU-1226-SM-4E3IJ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.35308 H3K4me3_G1E_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null NCI-H2106 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.79972 anterior (rostral) cingulate (medial prefrontal) cortex_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.01842 H3K4me3_HepG2_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null NCIH716 CCLE Cell Line Gene Expression Profiles 1.0 2.49708 MAX_HCT116_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ZNF143_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PLC/PRF/5 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.958254 arthritis GWASdb SNP-Disease Associations 1.0 0.422334 GBX2 ChEA Transcription Factor Targets 1.0 null MAX_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-W5X1-0006-SM-3GIJZ GTEx Tissue Sample Gene Expression Profiles 1.0 0.849806 H3K4me2_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-UPIC-0926-SM-4IHLV GTEx Tissue Sample Gene Expression Profiles -1.0 -0.941584 JJN-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.971679 GTEX-RU72-0626-SM-46MUI GTEx Tissue Sample Gene Expression Profiles 1.0 1.19437 GTEX-QVJO-0011-R8A-SM-447C7 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.04594 H3K4me3_cardiac muscle cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-D3-A2JN-06A-11R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null zona incerta, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.25062 POLR2A_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SMARCC1 ENCODE Transcription Factor Targets 1.0 null protective GeneRIF Biological Term Annotations 1.0 null STAT4 MotifMap Predicted Transcription Factor Targets 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-ER-A3ES-06A-11R-A20F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null abnormal diaphysis morphology GWASdb SNP-Phenotype Associations 1.0 1.25845 BRD-K90644597 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.15913 STAT6 ChEA Transcription Factor Targets 1.0 null metamizole sodium-3929 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null TBK1_knockdown_53_GSE17643 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -1.87866 involving GeneRIF Biological Term Annotations 1.0 null dentate gyrus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 3.15309 AP-4 MotifMap Predicted Transcription Factor Targets 1.0 null oxedrine-6798 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me3_fibroblast of mammary gland_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_bone marrow macrophage_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCC2108 CCLE Cell Line Gene Expression Profiles 1.0 1.57138 POLR2A_Raji_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-X3Y1-0426-SM-3P5Z4 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.08026 H3K4me1_CH12.LX_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null KYSE510 CCLE Cell Line Gene CNV Profiles 1.0 1.38235 influencing GeneRIF Biological Term Annotations 1.0 null FOS ENCODE Transcription Factor Targets 1.0 null BRD-K70712801 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.77503 BRD-K06845853 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.81412 anterior (rostral) cingulate (medial prefrontal) cortex_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.39322 H3K4me3_HCT116_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null NCI-H1770 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.31502 BRD-K81031146 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.39616 SETDB1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null pvt1wwox GeneRIF Biological Term Annotations 1.0 null GTEX-TKQ1-0008-SM-4DXSO GTEx Tissue Sample Gene Expression Profiles 1.0 1.38706 ZNF384 ENCODE Transcription Factor Targets 1.0 null wortmannin-1668 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null craniofacial osteosclerosis GWASdb SNP-Phenotype Associations 1.0 1.25845 HCC4006 CCLE Cell Line Gene CNV Profiles -1.0 -1.81298 GBX2-23144817-PC3-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null BRD-K59709463 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.40349 VI, right, paravermis Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.927365 metaphyseal sclerosis GWASdb SNP-Phenotype Associations 1.0 1.25845 hodgkin disease GAD Gene-Disease Associations 1.0 null HCC1419 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.20033 proxymetacaine-6332 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null SW 480 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.882329 GTEX-QLQ7-0526-SM-2I5G3 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.03254 GTEX-S7SF-1326-SM-4AD4P GTEx Tissue Sample Gene Expression Profiles 1.0 1.21638 SOX2-20726797-SW620-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null BRD-K92613860 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.02065 parietal neocortex_8 pcw_M_13058 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.04514 P12ICHIKAWA CCLE Cell Line Gene CNV Profiles -1.0 -2.22201 restricted GeneRIF Biological Term Annotations 1.0 null MCF7 GDSC Cell Line Gene Expression Profiles 1.0 1.54788 TBL1XR1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-S341-0726-SM-4AD5R GTEx Tissue Sample Gene Expression Profiles 1.0 1.13264 abnormality of facial skeleton GWASdb SNP-Phenotype Associations 1.0 0.584959 Brain Lower Grade Glioma_LGG_TCGA-E1-A7YI-01A-11R-A34F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_Caco-2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null decamethonium LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.23464 H3K4me3_cardiac mesoderm_hg19_4 ENCODE Histone Modification Site Profiles 1.0 null GTEX-P44H-0008-SM-48TDW GTEx Tissue Sample Gene Expression Profiles 1.0 0.970804 FOS_MCF 10A_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null IRF1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-S341-0126-SM-4AD64 GTEx Tissue Sample Gene Expression Profiles 1.0 0.83138 SMAD4 ChEA Transcription Factor Targets 1.0 null BRD-K39267096 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.08523 diaphyseal sclerosis GWASdb SNP-Phenotype Associations 1.0 1.25845 NCI-H1395 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.31743 H3K4me3_SK-N-MC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null HL60 BioGPS Cell Line Gene Expression Profiles 1.0 1.89634 POLR2AphosphoS5_HL-60_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_endothelial cell of umbilical vein_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCIH460 CCLE Cell Line Gene CNV Profiles 1.0 1.38833 endstage GeneRIF Biological Term Annotations 1.0 null GTEX-S3XE-0008-SM-3NM8O GTEx Tissue Sample Gene Expression Profiles 1.0 1.00514 GTEX-WEY5-0226-SM-3GIKN GTEx Tissue Sample Gene Expression Profiles -1.0 -0.836581 BRD-K72066653 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.0888 RERF-LC-OK Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.8285 sulfamerazine-3616 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Pancreatic Neoplasms dbGAP Gene-Trait Associations 1.0 0.303449 Meningococcal infection_Umbilical vein_GSE4646 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -1.69613 E2F6_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TFAP2C ENCODE Transcription Factor Targets 1.0 null BRD-K66732164 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.09078 outer portion of lateral ganglionic eminence Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.981599 including GeneRIF Biological Term Annotations 1.0 null GTEX-SIU8-0008-SM-4BRUC GTEx Tissue Sample Gene Expression Profiles 1.0 1.28944 TAF1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K44078665 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.74898 BRD-K55505527 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.92314 POLR2AphosphoS5_SK-N-SH_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-22-5481-01A-31R-1949-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCIH1395 CCLE Cell Line Gene CNV Profiles 1.0 1.57574 GTEX-OOBK-0126-SM-2YUND GTEx Tissue Sample Gene Expression Profiles 1.0 0.988075 BRD-K69347147 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.75455 CREB MotifMap Predicted Transcription Factor Targets 1.0 null GTEX-U3ZH-0326-SM-3DB7A GTEx Tissue Sample Gene Expression Profiles -1.0 -1.35761 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-5440-01A-01R-1514-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K54872884 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.46433 Psychosis (atypical) GWAS Catalog SNP-Phenotype Associations 1.0 0.129504 H3K4me3_brain microvascular endothelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null TAF1_GM12892_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null stage 5 chronic kidney disease GWASdb SNP-Phenotype Associations 1.0 1.00059 premature ovarian failure GWASdb SNP-Disease Associations 1.0 0.549587 H3K27ac_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null sirolimus-1001 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null BRD-K11399565 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.68994 H3K27ac_MCF-7_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null JHH-7 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.0938 mediodorsal nucleus of thalamus_13 pcw_F_12834 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.57868 GTEX-SSA3-0002-SM-3P61R GTEx Tissue Sample Gene Expression Profiles 1.0 1.79214 GTEX-QVJO-1325-SM-2S1QX GTEx Tissue Sample Gene Expression Profiles -1.0 -2.01447 BRD-K72146456 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 4.01002 NCIH1963 CCLE Cell Line Gene Expression Profiles -1.0 -1.69748 GTEX-W5WG-0002-SM-3NMDN GTEx Tissue Sample Gene Expression Profiles 1.0 1.07489 outer CP in dorsomedial parietal cortex (area 7m) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.03145 Ovarian Neoplasms CTD Gene-Disease Associations 1.0 1.05793 GTEX-OHPL-0326-SM-33HC8 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.963985 MAX_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27ac_myotube_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null diaphyseal sclerosis of the upper limbs GWASdb SNP-Phenotype Associations 1.0 1.25845 TAF1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null lymphoma GWASdb SNP-Phenotype Associations 1.0 0.500231 BRD-K44298652 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.74221 MYC_K562_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null Uterine Carcinosarcoma_UCS_TCGA-ND-A4WF-01A-11R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-OXRL-0326-SM-2I3F2 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.55522 BRD-K47926785 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.37359 MFM-223 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.20533 BRD-K24263752 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.72019 kawain-7369 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null abnormality of the rib cage GWASdb SNP-Phenotype Associations 1.0 1.25845 FOXP2 ENCODE Transcription Factor Targets 1.0 null GTEX-P78B-0008-SM-48TE1 GTEx Tissue Sample Gene Expression Profiles 1.0 1.95781 Prostate adenocarcinoma_PRAD_TCGA-YL-A9WI-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null 6-chloromelatonin LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.43299 H3K4me1_mammary epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null BRD-K38118226 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.15035 H3K9ac_K562_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null SIN3A_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCC44 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.48271 KPL-4 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.26696 NR1I2 ChEA Transcription Factor Targets 1.0 null H3K4me3_fibroblast of skin of abdomen_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null mediating GeneRIF Biological Term Annotations 1.0 null Brain Lower Grade Glioma_LGG_TCGA-TQ-A7RM-01A-11R-A33Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K01951210 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.6815 GTEX-N7MS-0011-R4a-SM-2HMKW GTEx Tissue Sample Gene Expression Profiles -1.0 -0.965792 I-II Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.12945 BRD-K52424224 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.69202 H3K9ac_fibroblast of lung_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null A172 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.933284 POLR2AphosphoS5_HCT116_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-2V-A95S-01A-11R-A37K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K10058823 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.58383 POLR2A_HeLa-S3_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_GM12866_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27ac_liver_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null H3K9ac_ES-E14_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null benfluorex-6727 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me1_liver_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-WL46-3026-SM-3LK7Z GTEx Tissue Sample Gene Expression Profiles -1.0 -0.990953 ASH2L-23239880-MESC-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null leukemia GWASdb SNP-Disease Associations 1.0 0.588054 HLC1 CCLE Cell Line Gene CNV Profiles -1.0 -1.63277 NCIH1975 CCLE Cell Line Gene Expression Profiles 1.0 1.4199 BRD-K80851151 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.70251 POLR2A_erythroblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K58005972 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.49983 HCC44 CCLE Cell Line Gene Expression Profiles 1.0 1.63691 BRD-K12384030 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.11974 pivmecillinam-7312 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null TE-10 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 GTEX-RVPV-0011-R11A-SM-2TF6F GTEx Tissue Sample Gene Expression Profiles -1.0 -2.07607 Kidney renal papillary cell carcinoma_KIRP_TCGA-Y8-A8RZ-01A-11R-A37K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_H7_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_GM18505_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SP1 ENCODE Transcription Factor Targets 1.0 null MG-63 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 OVMIU COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 GTEX-XLM4-2926-SM-4AT59 GTEx Tissue Sample Gene Expression Profiles -1.0 -2.03029 antiapoptotic GeneRIF Biological Term Annotations 1.0 null RAJI Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.32416 SJCRH30 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.2207 NFYB_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Diabetic Retinopathy HuGE Navigator Gene-Phenotype Associations 1.0 null TCF7L2_Panc1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null abnormality of the biliary system GWASdb SNP-Phenotype Associations 1.0 0.19199 NCI-H716 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 2.20661 MFE296 CCLE Cell Line Gene Expression Profiles -1.0 -1.81794 GTEX-XGQ4-0008-SM-4AT3Z GTEx Tissue Sample Gene Expression Profiles 1.0 1.82645 PSN1 CCLE Cell Line Gene CNV Profiles 1.0 1.66331 GTEX-POMQ-0326-SM-2I5FO GTEx Tissue Sample Gene Expression Profiles -1.0 -0.938878 GTEX-TKQ2-0008-SM-4DM5L GTEx Tissue Sample Gene Expression Profiles 1.0 1.33735 USF2_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-OOBJ-1026-SM-3NB2L GTEx Tissue Sample Gene Expression Profiles -1.0 -2.05457 EGR1 ENCODE Transcription Factor Targets 1.0 null GTEX-Q2AG-0011-R7A-SM-2HMJP GTEx Tissue Sample Gene Expression Profiles -1.0 -1.05688 BHLHE40_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K15128331 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.17058 USF2_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_BE2C_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null gemcitabine GeneRIF Biological Term Annotations 1.0 null Pancreatic adenocarcinoma_PAAD_TCGA-HV-A7OP-01A-11R-A33R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K59399000 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.03815 Liver hepatocellular carcinoma_LIHC_TCGA-DD-A39V-01A-11R-A213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me1_Brain Cingulate Gyrus Roadmap Epigenomics Histone Modification Site Profiles 1.0 null POLR2A_endothelial cell of umbilical vein_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K99377541 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.23958 abnormality of head or neck GWASdb SNP-Phenotype Associations 1.0 0.251361 primary somatosensory cortex (area S1, areas 3,1,2)_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.882877 probucol-4666 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null TAF1 ENCODE Transcription Factor Targets 1.0 null NCI-H1341 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 SK-N-SH Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.18134 H3K9ac_Adult Kidney Roadmap Epigenomics Histone Modification Site Profiles 1.0 null cortico-medial group, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.01523 MAX_SK-N-SH_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null tinidazole-3813 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-XK95-1026-SM-4GIDV GTEx Tissue Sample Gene Expression Profiles 1.0 0.891854 MAX_HCT116_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_GM12892_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PML_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_Panc1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-U8XE-0726-SM-3DB8O GTEx Tissue Sample Gene Expression Profiles 1.0 0.830579 GTEX-WZTO-0011-R11A-SM-4E3K9 GTEx Tissue Sample Gene Expression Profiles -1.0 -2.32688 laudanosine-7270 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me3_SK-N-SH_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null NCIH2170 CCLE Cell Line Gene Expression Profiles 1.0 3.40797 NCI-H1882 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.31502 GTEX-PW2O-0826-SM-48TC5 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.861901 Kidney renal clear cell carcinoma_KIRC_TCGA-G6-A8L7-01A-11R-A37O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Genetic Predisposition to Disease HuGE Navigator Gene-Phenotype Associations 1.0 null G28T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.01497 MDA-MB-157 GDSC Cell Line Gene Expression Profiles -1.0 -1.6808 abnormality of the fundus GWASdb SNP-Phenotype Associations 1.0 0.293634 HCC1187 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.10326 FOXM1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null eed_20123906_mouse_embryonic_stem_cell_lof_mouse_gpl1261_gse19076 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations -1.0 -0.817483 BRD-K62909525 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.79846 BRD-K94629607 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.97999 pyrvinium-5439 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null estradiol_mus musculus_gpl4134_gse23241 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null cerebellar cortex_11 yrs_F_12289 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.97248 3-hydroxy-DL-kynurenine-5276 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null NCI-H460 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 BRD-A71880598 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.92235 SAP30_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CardiacMyocytes BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 1.22811 bupropion-5782 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null RELA ENCODE Transcription Factor Targets 1.0 null H3K27ac_mammary epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null COLO320 CCLE Cell Line Gene Expression Profiles 1.0 2.07357 NCI-H23 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 SG in primary auditory cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.885147 SNU-61 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 NCI-H2342 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 HCC1954 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 GTEX-XQ8I-1926-SM-4BOOK GTEx Tissue Sample Gene Expression Profiles -1.0 -1.08534 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4983-01A-01R-1334-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null osteosclerosis of the ulna GWASdb SNP-Phenotype Associations 1.0 1.25845 malignant mesothelioma GWASdb SNP-Phenotype Associations 1.0 0.416458 CTCF_endothelial cell of umbilical vein_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null FANCG MSigDB Cancer Gene Co-expression Modules 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-DA-A3F3-06A-11R-A20F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-F7-A50I-01A-11R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null carbamazepine-952 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null ciclopirox-5023 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null morantel-1676 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null kidney GeneRIF Biological Term Annotations 1.0 null GTEX-R45C-0926-SM-3GAD4 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.921095 POLR2A_HeLa-S3_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null ZC3H11A ENCODE Transcription Factor Targets 1.0 null NCI-H510A COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 NCI-H1882 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.29369 Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-6997-01A-11R-2016-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_thymus_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SIN3A_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SUDHL1 CCLE Cell Line Gene CNV Profiles -1.0 -1.34826 POLR2A_testis_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TEAD4 ENCODE Transcription Factor Targets 1.0 null H3K4me2_K562_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null MOLT16 CCLE Cell Line Gene CNV Profiles -1.0 -1.38441 sodium phenylbutyrate-434 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me3_MEL cell line_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null BRD-K22449045 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 4.25877 GTEX-XQ8I-1726-SM-4BOQB GTEx Tissue Sample Gene Expression Profiles 1.0 1.54535 Pheochromocytoma and Paraganglioma_PCPG_TCGA-WB-A80Q-01A-11R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SIN3A_Panc1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BATF_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K09337184 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.39201 clavicular sclerosis GWASdb SNP-Phenotype Associations 1.0 1.25845 type ii diabetes mellitus GWASdb SNP-Phenotype Associations 1.0 0.969142 TAF1_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null stratum pyramidale of caudal CA1 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.24726 SAOS-2 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 15705887-Table3 GeneSigDB Published Gene Signatures 1.0 null MYC_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null PPARG ChEA Transcription Factor Targets 1.0 null Brain Lower Grade Glioma_LGG_TCGA-FG-A4MU-01B-11R-A28M-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null sirolimus-1632 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me3_cardiac mesoderm_hg19_6 ENCODE Histone Modification Site Profiles 1.0 null GATA3_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null snps GeneRIF Biological Term Annotations 1.0 null Prestwick-674-4276 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-WZTO-0011-R5B-SM-3NMC5 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.958718 MKN74 CCLE Cell Line Gene Expression Profiles 1.0 1.91985 ethosuximide-2280 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null HDAC2_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EB2 CCLE Cell Line Gene Expression Profiles 1.0 1.40186 H3K27ac_B cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XBED-0003-SM-47JWP GTEx Tissue Sample Gene Expression Profiles 1.0 1.35485 BRD-K02882086 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.14834 BRD-K66434795 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.61778 H3K27ac_ES-E14_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null JURLMK1 CCLE Cell Line Gene CNV Profiles 1.0 1.41159 indometacin-5468 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K9ac_astrocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null BRD-K91085913 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.45574 BRD-K90741031 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.0524 occur GeneRIF Biological Term Annotations 1.0 null NCI-H1435 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.91555 BRD-K85972696 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.08367 Acute Myeloid Leukemia_LAML_TCGA-AB-2861-03A-01T-0736-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null VZ in posterior parahippocampal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.06346 BRD-K95578456 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.34538 H3K4me3_epithelial cell of proximal tubule_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XMK1-1026-SM-4B65H GTEx Tissue Sample Gene Expression Profiles 1.0 0.947388 GTEX-XOTO-2126-SM-4B64U GTEx Tissue Sample Gene Expression Profiles 1.0 0.964865 Head and Neck squamous cell carcinoma_HNSC_TCGA-BA-7269-01A-11R-2016-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null abnormality of limb bone morphology GWASdb SNP-Phenotype Associations 1.0 1.25845 Skin Cutaneous Melanoma_SKCM_TCGA-D3-A5GT-01A-12R-A311-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null EP300_T47D_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null MDA-MB-134-VI Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.10439 medial ganglionic eminence Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.97869 pleural GeneRIF Biological Term Annotations 1.0 null BRD-K61087440 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.67686 GTEX-WWYW-0926-SM-3NB2Z GTEx Tissue Sample Gene Expression Profiles 1.0 0.851574 BRD-K18296568 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.9931 bucladesine-842 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-RU72-2926-SM-2TF66 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.08514 BRD-K31898235 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.23613 abnormality of upper limb metaphysis GWASdb SNP-Phenotype Associations 1.0 1.25845 fulvestrant-7091 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null primary visual cortex (striate cortex, area V1/17)_37 pcw_M_263195015 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.60172 sirolimus-2702 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-SIU7-0001-SM-3NMAW GTEx Tissue Sample Gene Expression Profiles 1.0 1.29631 BRD-K50961262 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.51474 cerebellum_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.6027 GTEX-OHPM-0326-SM-33HCA GTEx Tissue Sample Gene Expression Profiles -1.0 -1.94108 NUDHL1 CCLE Cell Line Gene CNV Profiles -1.0 -2.08605 BRD-K42081955 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.02568 POLR2A_HeLa-S3_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Prostate adenocarcinoma_PRAD_TCGA-FC-A4JI-01A-11R-A250-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_brown adipose tissue_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null RERF-LC-KJ Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.29798 CA1 field, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.70579 meclofenoxate-3405 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null YY1_HCT116_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null outer CP in dorsomedial frontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.17577 Pancreatic adenocarcinoma_PAAD_TCGA-S4-A8RO-01A-12R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null corpus callosum Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.83386 VZ in rostral cingulate neocortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.17338 BRD-K03599766 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.37696 GM2493 BioGPS Cell Line Gene Expression Profiles 1.0 1.271 H2AFZ_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null bcell GeneRIF Biological Term Annotations 1.0 null EZH2_fibroblast of lung_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-S95S-1026-SM-4B64M GTEx Tissue Sample Gene Expression Profiles 1.0 1.01819 Lung squamous cell carcinoma_LUSC_TCGA-66-2782-01A-01R-0851-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K72050003 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.18553 mRNA_TCF3_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells -1.0 null SMAD3-21741376-HESC-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null H3K4me3_H1-hESC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null HCC2688 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.94973 REST_MCF-7_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XOTO-0011-R11B-SM-4B64O GTEx Tissue Sample Gene Expression Profiles -1.0 -1.53543 RAD21 ENCODE Transcription Factor Targets 1.0 null GTEX-QDT8-0011-R7A-SM-32PKF GTEx Tissue Sample Gene Expression Profiles -1.0 -0.844006 POLR2A_K562_hg19_6 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K84478344 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.00485 CREM-20920259-GC1-SPG-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null MAX_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K28195874 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 4.95945 GTEX-W5X1-0001-SM-3P61V GTEx Tissue Sample Gene Expression Profiles 1.0 1.3063 H3K4me3_A549_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null E2F6_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XOTO-0011-R6B-SM-4B65X GTEx Tissue Sample Gene Expression Profiles -1.0 -0.950367 abnormality of the posterior segment of the eye GWASdb SNP-Phenotype Associations 1.0 0.293634 TCF7L2 ENCODE Transcription Factor Targets 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-CC-A3MA-01A-11R-A213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null alzheimer disease GWASdb SNP-Phenotype Associations 1.0 0.582698 GTEX-T2IS-1526-SM-32QPR GTEx Tissue Sample Gene Expression Profiles 1.0 1.49817 BFTC-905 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.06614 medial superior olive Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.27817 primary auditory cortex (core)_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.05299 QGP1 CCLE Cell Line Gene CNV Profiles -1.0 -1.5266 HCC12 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.44255 H3K4me3_fibroblast of lung_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null SCLC-22H Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.55948 GTEX-XQ8I-0626-SM-4BOPT GTEx Tissue Sample Gene Expression Profiles 1.0 1.23143 MEF2C ENCODE Transcription Factor Targets 1.0 null NCI-H1792 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.83203 BRD-K32145037 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.35214 estradiol_homo sapiens_gpl570_gse23610 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null CREB1 ChEA Transcription Factor Targets 1.0 null H3K27ac_brown adipose tissue_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null BRD-K45315294 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 4.12261 H3K4me1_brain_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-X638-0003-SM-47JZ1 GTEx Tissue Sample Gene Expression Profiles 1.0 1.80877 COLO 853 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.898316 BRD-K17367110 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.95498 LMNB2_02_191 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.63041 H3K4me3_cardiac mesoderm_hg19_7 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_kidney epithelial cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null many GeneRIF Biological Term Annotations 1.0 null paraventricular nuclei, left of thalamus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.28326 KMS-21BM Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.34275 LN-18 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.31397 SG in midlateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.17143 BRD-K09250647 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.33694 C2BBE1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.840374 H3K27me3_cardiac mesoderm_hg19_7 ENCODE Transcription Factor Binding Site Profiles 1.0 null sclerosis of metaphyses of the upper limbs GWASdb SNP-Phenotype Associations 1.0 1.25845 cSARS Bat SRBD_60Hour_None_GSE37827 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 1.40064 BRD-K44956383 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.51757 NCI-H82 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 2.00264 BRD-K08416835 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.15225 GTEX-S7PM-0011-R6A-SM-3NM8F GTEx Tissue Sample Gene Expression Profiles -1.0 -1.56935 inner portion of lateral ganglionic eminence Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.837834 H3K4me3_cardiac mesoderm_hg19_8 ENCODE Histone Modification Site Profiles 1.0 null BRD-K76067434 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.21033 CTCF_foreskin fibroblast_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null EKVX BioGPS Cell Line Gene Expression Profiles -1.0 -1.37988 RPMI 8226 BioGPS Cell Line Gene Expression Profiles -1.0 -0.830524 mir1204 GeneRIF Biological Term Annotations 1.0 null H3K4me3_fibroblast of lung_hg19_5 ENCODE Histone Modification Site Profiles 1.0 null BRD-K83122599 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.08898 BRD-K35792251 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.3518 cerebellar cortex_21 pcw_M_12886 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.977739 MXI1_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null amygdaloid complex_21 pcw_M_12886 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.25235 H3K27me3_CD34 Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null abnormality of the skull base GWASdb SNP-Phenotype Associations 1.0 1.25845 GTEX-WZTO-0011-R1B-SM-3NMAR GTEx Tissue Sample Gene Expression Profiles -1.0 -1.59222 H3K4me3_CD3 Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null BRD-K10704442 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.46256 YY1_SK-N-SH_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAX_C2C12_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-S33H-1826-SM-4AD65 GTEx Tissue Sample Gene Expression Profiles 1.0 1.43634 Brain Lower Grade Glioma_LGG_TCGA-VW-A8FI-01A-11R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null JUND_H1-hESC_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null SPI1-20517297-HL60-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null DMS 273 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.836738 H3K4me3_HeLa-S3_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null ethotoin-3892 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null A-Vietnam-1203-2004(H5N1)_12Hour_21865398_GSE28166 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 1.38512 Acute Myeloid Leukemia_LAML_TCGA-AB-2972-03A-01T-0734-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hippocampus (hippocampal formation)_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.08575 dorsorostral division of MFC (area 32) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.37006 estradiol_mus musculus_gpl4134_gse23072 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-P4PQ-0326-SM-2HMJ8 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.17428 GTEX-RTLS-0008-SM-48FET GTEx Tissue Sample Gene Expression Profiles 1.0 1.70529 GTEX-RVPU-0011-R9A-SM-3NM8E GTEx Tissue Sample Gene Expression Profiles -1.0 -1.07951 Polycystic Ovary Syndrome_Adipose tissue_GSE5090 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -1.4796 abnormal internal genitalia GWASdb SNP-Phenotype Associations 1.0 0.133587 ventrolateral prefrontal cortex_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.5564 abnormal external genitalia GWASdb SNP-Phenotype Associations 1.0 0.332291 REST_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K94580242 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.73867 multiple sclerosis GWASdb SNP-Disease Associations 1.0 1.43537 BRD-K96170781 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.97337 BRD-K60806315 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.0518 testosterone-5271 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null COLO 857 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.832906 nfe2l2_18059474_liver_lof_mouse_gpl1261_gds3406 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.124218 CTCF_fibroblast of the aortic adventitia_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_fibroblast of gingiva_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_testis_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null octreotide LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.06876 HOP92 BioGPS Cell Line Gene Expression Profiles -1.0 -1.24006 CREB1_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null asthma GWASdb SNP-Disease Associations 1.0 0.588054 GTEX-PWOO-0008-SM-48TDU GTEx Tissue Sample Gene Expression Profiles 1.0 1.91479 COLO-320-HSR COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 BRD-K63754039 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.4516 KURAMOCHI Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.06581 IOMMLEE CCLE Cell Line Gene Expression Profiles 1.0 1.52217 BRD-K66030669 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.90288 VIIIA, right, paravermis Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.869208 nr2c2_20864514_liver_1yo_lof_mouse_gpl4134_gse21903 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations -1.0 -0.055129 KAT2A_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_GM19099_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-37-4135-01A-01R-1100-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MSTO211H CCLE Cell Line Gene Expression Profiles 1.0 2.52097 18451145-TableS1 GeneSigDB Published Gene Signatures 1.0 null primary motor cortex (area M1, area 4)_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.37431 HEL Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.926315 H3K4me3_choroid plexus epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-T6MN-0011-R7A-SM-32QP5 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.10707 cerebellar cortex_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.71991 abnormality of the ulna GWASdb SNP-Phenotype Associations 1.0 1.25845 BRD-K73075421 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.92363 BRD-K48549243 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.01007 abnormality of the ovary GWASdb SNP-Phenotype Associations 1.0 0.262174 broxyquinoline LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.07837 globus pallidus, internal segment, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.99081 GTEX-OOBJ-0326-SM-33HBO GTEx Tissue Sample Gene Expression Profiles -1.0 -1.24604 vitamin c_homo sapiens_gpl570_gse11919 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Prostate adenocarcinoma_PRAD_TCGA-KK-A7AQ-01A-11R-A33R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-TSE9-2926-SM-3DB77 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.47844 EZH2_keratinocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-U3ZN-0226-SM-3DB8D GTEx Tissue Sample Gene Expression Profiles -1.0 -1.4365 BRD-K86838462 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.38464 primary auditory cortex (core)_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.90216 GTEX-VUSG-1526-SM-4KKZH GTEx Tissue Sample Gene Expression Profiles 1.0 0.917465 diabetes mellitus GWASdb SNP-Disease Associations 1.0 0.376937 Sarcoma_SARC_TCGA-X6-A7W8-01A-21R-A355-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-WYVS-1726-SM-3NMAY GTEx Tissue Sample Gene Expression Profiles 1.0 0.953814 BRD-K55053106 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.98061 BRD-K91470977 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.12813 TFAP2C ChEA Transcription Factor Targets 1.0 null GTEX-P4PP-1026-SM-3NM9O GTEx Tissue Sample Gene Expression Profiles -1.0 -1.18148 ZNF143_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K27083306 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.14922 orbital frontal cortex_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 2.53868 MAX_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-NPJ7-2826-SM-2I3FU GTEx Tissue Sample Gene Expression Profiles -1.0 -1.01129 Rectum adenocarcinoma_READ_TCGA-AG-3902-01A-01R-A32Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K52973286 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 4.31215 GTEX-T5JC-0011-R2A-SM-32PLZ GTEx Tissue Sample Gene Expression Profiles -1.0 -0.952116 KAT2A ENCODE Transcription Factor Targets 1.0 null COR-L311 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 SMAD3 ChEA Transcription Factor Targets 1.0 null H3K4me3_megakaryocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me1_fibroblast of lung_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-RWSA-2026-SM-47JX8 GTEx Tissue Sample Gene Expression Profiles 1.0 1.11744 AU565 CCLE Cell Line Gene CNV Profiles 1.0 1.36893 GTEX-REY6-1726-SM-48FDL GTEx Tissue Sample Gene Expression Profiles 1.0 1.07067 BRD-K74701308 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.34862 REST_PFSK-1_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XLM4-0004-SM-4AT5I GTEx Tissue Sample Gene Expression Profiles 1.0 1.08039 Liver hepatocellular carcinoma_LIHC_TCGA-DD-A3A6-01A-11R-A22L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null renal GeneRIF Biological Term Annotations 1.0 null diabetes, type 2 GAD Gene-Disease Associations 1.0 null POLR2A_embryonic fibroblast_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XPT6-0001-SM-4B64G GTEx Tissue Sample Gene Expression Profiles 1.0 1.50505 H3K27me3_megakaryocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Crus I, right, lateral hemisphere Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.856823 JUND ENCODE Transcription Factor Targets 1.0 null frequently GeneRIF Biological Term Annotations 1.0 null whereas GeneRIF Biological Term Annotations 1.0 null POLR2AphosphoS5_PFSK-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K56590597 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.83531 MXI1_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-QDVN-0426-SM-48TZ6 GTEx Tissue Sample Gene Expression Profiles 1.0 0.871407 VZ in caudal entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.871745 abnormality of metabolism/homeostasis GWASdb SNP-Phenotype Associations 1.0 0.104486 indometacin-7409 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me3_ES-E14_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null NCOR1 ENCODE Transcription Factor Targets 1.0 null STAT3 ChEA Transcription Factor Targets 1.0 null GTEX-XQ3S-0001-SM-4B64K GTEx Tissue Sample Gene Expression Profiles 1.0 1.69222 anterior (rostral) cingulate (medial prefrontal) cortex_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.910074 451LU COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 POLR2A_MCF-7_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SUM 159PT Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.43585 ventrolateral prefrontal cortex_24 pcw_M_12288 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.75152 SOX2 ChEA Transcription Factor Targets 1.0 null HDAC1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null VZ in ventromedial extrastriate cortex (VP) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.24021 GTEX-PVOW-2626-SM-32PL8 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.13863 cochlear nuclei, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.833183 SNU16 CCLE Cell Line Gene CNV Profiles 1.0 2.23561 MLANA MSigDB Cancer Gene Co-expression Modules 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-AL-A5DJ-01A-11R-A26U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PCI-15A COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 GTEX-XMD1-0011-R2B-SM-4AT5N GTEx Tissue Sample Gene Expression Profiles -1.0 -0.898164 15723654-Table2 GeneSigDB Published Gene Signatures 1.0 null SP1_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XLM4-0011-R7A-SM-4AT5L GTEx Tissue Sample Gene Expression Profiles -1.0 -0.903899 POLR2A_A549_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null SPI1_GM12891_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MXI1 ENCODE Transcription Factor Targets 1.0 null Hodgkin's lymphoma GWAS Catalog SNP-Phenotype Associations 1.0 0.342586 abnormal joint morphology GWASdb SNP-Phenotype Associations 1.0 0.292034 MSTO211H CCLE Cell Line Gene CNV Profiles 1.0 1.89632 GTEX-QDVN-0008-SM-48U2D GTEx Tissue Sample Gene Expression Profiles 1.0 0.958527 parietal neocortex_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.14731 BFTC-905 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 MYC_MCF-7_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAX_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-T6MN-0011-R8A-SM-32QP3 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.28129 GTEX-PVOW-0008-SM-48TE8 GTEx Tissue Sample Gene Expression Profiles 1.0 1.37304 Lung adenocarcinoma_LUAD_TCGA-97-8171-01A-11R-2287-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-QMR6-0011-R11A-SM-32PKK GTEx Tissue Sample Gene Expression Profiles -1.0 -1.88751 FOS_MCF 10A_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-X4XX-0011-R2A-SM-3P623 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.0789 premotor cortex (area 6) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.95911 sclerosis of finger phalanx GWASdb SNP-Phenotype Associations 1.0 1.25845 abnormality of the clavicle GWASdb SNP-Phenotype Associations 1.0 1.25845 H3K4me1_K562_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null KP4 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.839898 abnormality of the genitourinary system GWASdb SNP-Phenotype Associations 1.0 0.304854 NR3C1_A549_hg19_7 ENCODE Transcription Factor Binding Site Profiles 1.0 null HMGN3_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TCF12_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SG in temporal polar cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.883859 EP300 ENCODE Transcription Factor Targets 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-D9-A3Z4-01A-11R-A239-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null RBBP5_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null lupus erythematosus GWASdb SNP-Disease Associations 1.0 0.845188 KM-H2 COSMIC Cell Line Gene CNV Profiles -1.0 -3.45689 HCC-44 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 contribute GeneRIF Biological Term Annotations 1.0 null H3K4me1_CH12.LX_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null sclerosis of humeral diaphysis GWASdb SNP-Phenotype Associations 1.0 1.25845 GTEX-WVLH-0011-R6A-SM-3MJFZ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.02689 bone disease GWASdb SNP-Disease Associations 1.0 0.237678 YY1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null carmustine-6883 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-V955-0726-SM-3GAFG GTEx Tissue Sample Gene Expression Profiles -1.0 -1.17475 oxaprozin-4352 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-V955-0326-SM-4JBGV GTEx Tissue Sample Gene Expression Profiles -1.0 -0.907035 EW-1 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 GTEX-O5YT-1026-SM-3MJGF GTEx Tissue Sample Gene Expression Profiles -1.0 -0.896714 BRD-K41202439 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.03136 TP53-23651856-MEF-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null KE97 CCLE Cell Line Gene Expression Profiles 1.0 1.34884 ESR2-21235772-MCF-7-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null cholecystolithiasis GWASdb SNP-Disease Associations 1.0 0.660239 Sarcoma_SARC_TCGA-MJ-A850-01A-11R-A355-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-43-A56V-01A-11R-A26W-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5888-01A-11R-1592-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null abnormality of the vertebrae GWASdb SNP-Phenotype Associations 1.0 1.25845 Kidney Chromophobe_KICH_TCGA-KN-8427-01A-11R-2315-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-QMR6-1326-SM-32PLB GTEx Tissue Sample Gene Expression Profiles -1.0 -1.32655 abnormal glucose homeostasis GWASdb SNP-Phenotype Associations 1.0 0.254693 BRD-K79561909 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.57724 Lung squamous cell carcinoma_LUSC_TCGA-63-A5MU-01A-11R-A26W-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null 20220088-SuppTable1 GeneSigDB Published Gene Signatures 1.0 null POLR2A_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K81779733 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.71474 IKZF1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K15647573 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 4.72745 H3K4me3_GM12865_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null pyrimethamine-1974 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H2AFZ_fibroblast of dermis_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-T6MO-0008-SM-4DM6T GTEx Tissue Sample Gene Expression Profiles 1.0 1.19598 TCF12_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XK95-0008-SM-4AT5G GTEx Tissue Sample Gene Expression Profiles 1.0 1.41493 Liver hepatocellular carcinoma_LIHC_TCGA-DD-A4NR-01A-11R-A311-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null pyramidal layer of caudal subiculum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.867325 POLR2AphosphoS5_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K34475679 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.06345 BRD-K87472370 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.73623 ovary GTEx Tissue Gene Expression Profiles 1.0 1.20405 GTEX-XPVG-0326-SM-4B653 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.988204 primary auditory cortex (core)_37 pcw_M_263195015 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.943403 GTEX-XLM4-0011-R9A-SM-4AT45 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.4557 GTEX-XQ3S-0008-SM-4GIDZ GTEx Tissue Sample Gene Expression Profiles 1.0 0.906686 BRD-K54107674 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.56553 GTEX-P78B-1026-SM-3NMC4 GTEx Tissue Sample Gene Expression Profiles 1.0 1.05016 NFYA_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null oncogenesis GeneRIF Biological Term Annotations 1.0 null GTEX-WFG8-0008-SM-4LVN6 GTEx Tissue Sample Gene Expression Profiles 1.0 0.837457 BRD-K39411863 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.61435 Brain Lower Grade Glioma_LGG_TCGA-HT-7691-01A-11R-2256-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_cortical plate_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_H1-hESC_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null VZ in subgenual cingulate neocortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.461 lipid metabolism disorder GWASdb SNP-Disease Associations 1.0 1.17101 VZ in inferolateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.957415 HHV8_72Hour-BEC_20080955_GSE16354 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.8325 HDAC2_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ELF1 ENCODE Transcription Factor Targets 1.0 null ELK1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-UTHO-2926-SM-3P5Z9 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.12136 pvt1 GeneRIF Biological Term Annotations 1.0 null GTEX-P4PP-0326-SM-33HC4 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.79648 BRD-K82785545 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.14182 ELF1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SPI1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RCOR1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-SNOS-1026-SM-4DM4Y GTEx Tissue Sample Gene Expression Profiles 1.0 1.45805 KYSE-510 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.36555 EP300_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null TBP_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WK11-2526-SM-3NM9Y GTEx Tissue Sample Gene Expression Profiles -1.0 -1.36299 PNU-0251126-7390 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null MAX_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null abnormality of the liver GWASdb SNP-Phenotype Associations 1.0 0.643909 clozapine-5265 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null abnormality of digit GWASdb SNP-Phenotype Associations 1.0 1.25845 SNU478 CCLE Cell Line Gene CNV Profiles 1.0 2.24027 NR1I2-20693526-LIVER-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null GTEX-S33H-1326-SM-4AD6A GTEx Tissue Sample Gene Expression Profiles 1.0 1.15894 TAF1_HeLa-S3_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null chronic renal failure; diabetes mellitus, insulin-dependent; diabetes mellitus, type 1; diabetic nephropathies; diabetic nephropathy; diabetic retinopathy; kidney failure, chronic GAD Gene-Disease Associations 1.0 null Diabetic Nephropathies HuGE Navigator Gene-Phenotype Associations 1.0 null HCC60 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.03995 Brain Lower Grade Glioma_LGG_TCGA-DU-A5TP-01A-11R-A28M-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K63420290 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.38517 NCI-H2170 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 PSN1 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 gastrointestinal system disease GWASdb SNP-Disease Associations 1.0 0.145002 GTEX-X3Y1-0726-SM-3P5YU GTEx Tissue Sample Gene Expression Profiles -1.0 -1.10545 Brain Lower Grade Glioma_LGG_TCGA-HT-7475-01A-11R-2027-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MG-262-7063 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me3_liver_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-ZF-A9R9-01A-11R-A38B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hypertension GWASdb SNP-Phenotype Associations 1.0 0.817516 GTEX-OOBJ-0008-SM-3NB26 GTEx Tissue Sample Gene Expression Profiles 1.0 0.941638 GTEX-RWS6-0001-SM-3NMAL GTEx Tissue Sample Gene Expression Profiles 1.0 1.74544 GTEX-V1D1-0226-SM-4JBHG GTEx Tissue Sample Gene Expression Profiles 1.0 0.842597 membrane-bounded organelle LOCATE Predicted Protein Localization Annotations 1.0 null mesangial abnormality GWASdb SNP-Phenotype Associations 1.0 1.25845 H3K4me3_skeletal muscle myoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null ChIP_ASH2L_23239880 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null BRD-K82107433 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.70096 KYSE-510 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 MAFA MotifMap Predicted Transcription Factor Targets 1.0 null FOXM1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null abnormality of the vertebral column GWASdb SNP-Phenotype Associations 1.0 0.313272 LBP-1 MotifMap Predicted Transcription Factor Targets 1.0 null SPI1_HL-60_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_fibroblast of foreskin _hg19_2 ENCODE Histone Modification Site Profiles 1.0 null MYC ENCODE Transcription Factor Targets 1.0 null CHD2_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Sarcoma_SARC_TCGA-DX-AB2X-01A-11R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCIH209 CCLE Cell Line Gene Expression Profiles -1.0 -1.47001 MAX_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_endothelial cell of umbilical vein_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-X261-0011-R7A-SM-4E3JJ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.27007 GTEX-UPK5-2026-SM-4JBIM GTEx Tissue Sample Gene Expression Profiles 1.0 1.30433 NCI-H647 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 GTEX-T5JC-0011-R11A-SM-32PMB GTEx Tissue Sample Gene Expression Profiles -1.0 -1.58489 BJAB Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.15099 BRD-K22718400 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.93403 GTEX-UTHO-0011-R5A-SM-3GIJD GTEx Tissue Sample Gene Expression Profiles -1.0 -1.38773 GTEX-OIZH-0326-SM-2HMKC GTEx Tissue Sample Gene Expression Profiles -1.0 -1.38342 microrna GeneRIF Biological Term Annotations 1.0 null hypersensitivity reaction type ii disease GWASdb SNP-Disease Associations 1.0 0.152564 BRD-K84145110 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.66999 NCI-H2170 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 3.19301 H3K4me3_cardiac muscle cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null HCC2279 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.895323 alzheimer's disease GWASdb SNP-Disease Associations 1.0 0.680104 H3K4me3_GM12864_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null BRD-K54212583 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.53112 GTEX-RU72-0011-R11A-SM-2TF6J GTEx Tissue Sample Gene Expression Profiles -1.0 -1.45052 abnormality of the urethra GWASdb SNP-Phenotype Associations 1.0 0.584959 cerebellar cortex_8 yrs_M_12981 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.872515 GTEX-VJYA-0001-SM-3NMDJ GTEx Tissue Sample Gene Expression Profiles 1.0 2.64675 H3K4me3_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null BRD-K05335635 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.73149 GTEX-QVUS-0008-SM-447AY GTEx Tissue Sample Gene Expression Profiles 1.0 1.43723 HCC2688 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.54893 59M Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.12892 hepatobiliary disease GWASdb SNP-Disease Associations 1.0 0.227335 xamoterol-5363 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null HMGN3 ENCODE Transcription Factor Targets 1.0 null CTCF_osteoblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_Brain Inferior Temporal Lobe Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GTEX-X4XX-0011-R6B-SM-46MWP GTEx Tissue Sample Gene Expression Profiles -1.0 -0.898965 BRD-K59821747 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.89997 GTEX-TSE9-0011-R5A-SM-3DB7J GTEx Tissue Sample Gene Expression Profiles -1.0 -1.2182 BRD-K91628074 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.62964 JEKO-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.923153 GTEX-WCDI-0002-SM-3P61U GTEx Tissue Sample Gene Expression Profiles 1.0 1.84014 BRD-K57517066 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.58164 dorsolateral prefrontal cortex_26 pcw_F_12949 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.907603 BRD-K91022335 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.02505 LTK MSigDB Cancer Gene Co-expression Modules 1.0 null perhexiline-5081 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null stage GeneRIF Biological Term Annotations 1.0 null GTEX-U8XE-2526-SM-4E3IT GTEx Tissue Sample Gene Expression Profiles 1.0 1.06838 H3K4me1_embryonic fibroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null BRD-K36882679 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.09447 POLR2A_HEK293_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27ac_skeletal muscle myoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null TCF12 ENCODE Transcription Factor Targets 1.0 null BRD-K30288714 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.47173 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5169-01A-01R-1426-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K85803608 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.1051 premature ovarian failure GWASdb SNP-Phenotype Associations 1.0 0.468662 CL14 CCLE Cell Line Gene CNV Profiles -1.0 -1.34873 BRD-K78615842 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 4.07578 15120971-Table2 GeneSigDB Published Gene Signatures 1.0 null systemic lupus erythematosus GWASdb SNP-Disease Associations 1.0 0.845188 Pancreatic adenocarcinoma_PAAD_TCGA-L1-A7W4-01A-12R-A36G-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2941-03A-01T-0740-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null superior occipital gyrus, right, inferior bank of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.18368 ventricular (matrix) zone of cerebellum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.68759 NCIH1792 CCLE Cell Line Gene CNV Profiles 1.0 2.04895 BRD-K24108193 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.42783 H3K9ac_HepG2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null YY1_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K83487481 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.92785 striatum_19 yrs_F_12832 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.71991 cardiovascular system disease GWASdb SNP-Disease Associations 1.0 1.17101 GTEX-T6MN-0926-SM-32PLX GTEx Tissue Sample Gene Expression Profiles -1.0 -0.998648 TBL1XR1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-TMMY-1326-SM-4DXU9 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.08159 H3K4me3_GM12864_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null POLR2AphosphoS2_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null USF1_A549_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAX_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-78-7153-01A-11R-2039-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_epithelial cell of esophagus_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null EP300_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null sclerosis of skull base GWASdb SNP-Phenotype Associations 1.0 1.25845 ARAF MSigDB Cancer Gene Co-expression Modules 1.0 null BRD-A34842997 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.40303 POLR2AphosphoS5_U-87 MG_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-UJHI-0226-SM-4IHJL GTEx Tissue Sample Gene Expression Profiles -1.0 -0.831238 RCOR1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PRDM14 ChEA Transcription Factor Targets 1.0 null HCT-8 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.855548 H3K27ac_Brain Mid Frontal Lobe Roadmap Epigenomics Histone Modification Site Profiles 1.0 null HA-E2F1_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-QVJO-0011-R5A-SM-2S1QM GTEx Tissue Sample Gene Expression Profiles -1.0 -1.12098 SF295 BioGPS Cell Line Gene Expression Profiles 1.0 0.907245 GTEX-WL46-0011-R2A-SM-3LK6O GTEx Tissue Sample Gene Expression Profiles -1.0 -1.67141 FOXM1 ENCODE Transcription Factor Targets 1.0 null CA2 field, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.41112 KYSE-510 GDSC Cell Line Gene Expression Profiles 1.0 1.8226 Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-FM-8000-01A-11R-2213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me1_placenta_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null BRD-K39649723 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.70737 caudal portion of VFC (area 44) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.52939 H3K4me1_keratinocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null abnormality of limbs GWASdb SNP-Phenotype Associations 1.0 0.67978 GTEX-RN64-0326-SM-2TC5J GTEx Tissue Sample Gene Expression Profiles -1.0 -2.19518 ESR2 ChEA Transcription Factor Targets 1.0 null E2F6_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null urinary system disease GWASdb SNP-Disease Associations 1.0 0.234824 Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-VB-A8QN-01A-11R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K95500860 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.41231 BRD-K01980291 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.20208 Pancreatic adenocarcinoma_PAAD_TCGA-IB-AAUO-01A-12R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null abnormality of circulating hormone level GWASdb SNP-Phenotype Associations 1.0 0.261515 MAX_NB4_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-UPK5-1426-SM-4JBHH GTEx Tissue Sample Gene Expression Profiles -1.0 -0.977269 GTEX-S4UY-0008-SM-3NM8H GTEx Tissue Sample Gene Expression Profiles 1.0 1.61473 HCC1171 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.967471 PAX5_GM12892_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K9me3_HeLa-S3_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-QVUS-0011-R8A-SM-3GAD7 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.953254 KE37 CCLE Cell Line Gene CNV Profiles -1.0 -1.71866 BRD-K26459891 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.41317 GTEX-POMQ-0008-SM-48TE7 GTEx Tissue Sample Gene Expression Profiles 1.0 1.23331 ZNF217-24962896-MCF7-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null Pancreatic adenocarcinoma_PAAD_TCGA-HV-A7OL-01A-11R-A33R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PHF8_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null STAT6-20620947-CD4_POS_T-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null GTEX-VJWN-0726-SM-3GIJ8 GTEx Tissue Sample Gene Expression Profiles 1.0 0.97895 GTEX-X4XX-2926-SM-3NMB1 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.53255 TBP_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SMARCC1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K58408512 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.71116 GTEX-S95S-0008-SM-4AT5M GTEx Tissue Sample Gene Expression Profiles 1.0 1.26453 RUNX3 ENCODE Transcription Factor Targets 1.0 null BCLAF1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MYC_HeLa-S3_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BCL2 MSigDB Cancer Gene Co-expression Modules 1.0 null GTEX-VUSH-0004-SM-3P61T GTEx Tissue Sample Gene Expression Profiles 1.0 0.948492 abnormality of the thorax GWASdb SNP-Phenotype Associations 1.0 1.25845 downstream GeneRIF Biological Term Annotations 1.0 null MOLM-16 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.849478 Prostate adenocarcinoma_PRAD_TCGA-VP-A875-01A-31R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K94751306 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.73375 guaifenesin-4371 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null KURAMOCHI COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 GTEX-TMZS-0001-SM-3P61Q GTEx Tissue Sample Gene Expression Profiles 1.0 1.28331 NCOR1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null patchy changes of bone mineral density GWASdb SNP-Phenotype Associations 1.0 1.25845 KG1 CCLE Cell Line Gene CNV Profiles -1.0 -1.57052 BRD-K34234678 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 4.5559 EWSR1 ChEA Transcription Factor Targets 1.0 null polysensory temporal cortex (area 22p) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.98999 GTEX-X585-0002-SM-46MVA GTEx Tissue Sample Gene Expression Profiles 1.0 1.16637 HCC1143 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.840279 CCRT CEM BioGPS Cell Line Gene Expression Profiles 1.0 1.43209 MYC_K562_hg19_6 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-RNOR-0826-SM-2TF5C GTEx Tissue Sample Gene Expression Profiles -1.0 -1.29844 SNU626 CCLE Cell Line Gene CNV Profiles -1.0 -1.38021 idazoxan-3088 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Prostate adenocarcinoma_PRAD_TCGA-YL-A8S8-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PPARD ChEA Transcription Factor Targets 1.0 null ATF1 MotifMap Predicted Transcription Factor Targets 1.0 null BRD-K69387464 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.59201 BRD-K49292348 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.3998 H3K4me3_fibroblast of foreskin _hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Thymus BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.16217 H3K27ac_Panc1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null BRD-K12925598 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.79487 H3K27ac_keratinocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-T6MO-0003-SM-3NMAG GTEx Tissue Sample Gene Expression Profiles 1.0 1.43719 primary motor cortex (area M1, area 4)_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.54834 H3K9ac_keratinocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-WVLH-2926-SM-3MJG5 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.89243 SUP-HD1 COSMIC Cell Line Gene CNV Profiles -1.0 -3.45689 RBBP5 ENCODE Transcription Factor Targets 1.0 null Hepatitis C infection_Hepatocyte_GSE2067 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -1.97457 H3K4me1_skeletal muscle myoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null EP300_osteoblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-QDT8-3026-SM-32PKB GTEx Tissue Sample Gene Expression Profiles -1.0 -1.67634 aconitine-2776 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null abnormality of cardiovascular system physiology GWASdb SNP-Phenotype Associations 1.0 0.677826 DB Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.09245 Prostate adenocarcinoma_PRAD_TCGA-QU-A6IN-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4352-01A-01R-1289-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null EVSA-T GDSC Cell Line Gene Expression Profiles -1.0 -1.48897 transformed GeneRIF Biological Term Annotations 1.0 null GTEX-T6MN-0008-SM-4DM7H GTEx Tissue Sample Gene Expression Profiles 1.0 1.03416 SIX5_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_testis_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null abnormality of the immune system GWASdb SNP-Phenotype Associations 1.0 1.37994 tauopathy GWASdb SNP-Disease Associations 1.0 0.680104 BRD-K41731469 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.3384 H3K4me3_ES-E14_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null sirolimus-6958 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null BRD-K61831307 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.70458 Lymphoma_burkitts(Daudi) BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 0.8608 cortical sclerosis GWASdb SNP-Phenotype Associations 1.0 1.25845 MTA3 ENCODE Transcription Factor Targets 1.0 null 15723654-Table3 GeneSigDB Published Gene Signatures 1.0 null DOK GDSC Cell Line Gene Expression Profiles -1.0 -2.76382 diabetic GeneRIF Biological Term Annotations 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A6JE-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Brain Lower Grade Glioma_LGG_TCGA-E1-A7YQ-01A-11R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Prostate adenocarcinoma_PRAD_TCGA-EJ-8469-01A-11R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MAX_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-T6MN-0526-SM-32PMS GTEx Tissue Sample Gene Expression Profiles -1.0 -1.14409 NCI-H322T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.938375 Sarcoma_SARC_TCGA-FX-A48G-01A-11R-A24X-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-UPJH-0001-SM-3NMDE GTEx Tissue Sample Gene Expression Profiles 1.0 1.64783 BRD-K73874262 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 4.36553 mediodorsal nucleus of thalamus_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.86647 globus pallidus, external segment, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.79722 POLR2A_GM12891_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K36me3_G1E_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_A549_hg19_4 ENCODE Histone Modification Site Profiles 1.0 null GTEX-OHPN-0011-R11A-SM-2I5FM GTEx Tissue Sample Gene Expression Profiles -1.0 -1.41773 Head and Neck squamous cell carcinoma_HNSC_TCGA-T2-A6WZ-01A-21R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K27me3_cardiac mesoderm_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null ASH2L ChEA Transcription Factor Targets 1.0 null HDAC1 ENCODE Transcription Factor Targets 1.0 null GTEX-Q734-0426-SM-48TZX GTEx Tissue Sample Gene Expression Profiles -1.0 -0.956718 BRD-K40060703 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.68033 intracellular part LOCATE Predicted Protein Localization Annotations 1.0 null all GWASdb SNP-Phenotype Associations 1.0 0.227075 Lung squamous cell carcinoma_LUSC_TCGA-63-A5MT-01A-21R-A26W-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null 17555561-Table1 GeneSigDB Published Gene Signatures 1.0 null BRD-K84514454 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.13712 YY1_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CHD2_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27me3_cardiac mesoderm_hg19_8 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_Brain Germinal Matrix Roadmap Epigenomics Histone Modification Site Profiles 1.0 null abnormality of the pancreas GWASdb SNP-Phenotype Associations 1.0 0.40247 WBSCR22 MSigDB Cancer Gene Co-expression Modules 1.0 null POLR2AphosphoS5_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null end-stage renal disease GAD Gene-Disease Associations 1.0 null GTEX-QDVN-0526-SM-48TZ4 GTEx Tissue Sample Gene Expression Profiles 1.0 0.906652 immune system cancer GWASdb SNP-Disease Associations 1.0 0.296647 CHD7_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null USF2 ENCODE Transcription Factor Targets 1.0 null KMH2 CCLE Cell Line Gene CNV Profiles -1.0 -3.21045 H3K4me3_H7_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GSK3B_KD_GDS4305_181_human_MOLM-14 myeloid leukemia cell line GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null HCFC1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-ER-A19J-06A-11R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null central nervous system disease GWASdb SNP-Disease Associations 1.0 0.290151 MG-63 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.09583 H3K4me3_foreskin fibroblast_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null external granular (germinal) layer of lower rhombic lip Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.01916 acetazolamide-1686 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me3_K562_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-X261-0011-R5A-SM-3NMB4 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.13361 cell type cancer GWASdb SNP-Disease Associations 1.0 0.346857 Lung adenocarcinoma_LUAD_TCGA-62-A472-01A-11R-A24H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K13534347 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.10958 GTEX-QLQ7-0008-SM-447AW GTEx Tissue Sample Gene Expression Profiles 1.0 0.887173 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A7UI-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-X4XY-0226-SM-4E3IZ GTEx Tissue Sample Gene Expression Profiles 1.0 0.929426 solanine-4087 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null BRD-K41033343 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.64884 BRD-K71109636 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.52416 BRD-K70851916 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.10064 FOXP2_PFSK-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SIN3A_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XMK1-0126-SM-4B65F GTEx Tissue Sample Gene Expression Profiles 1.0 1.06851 plicamycin_homo sapiens_gpl570_gse25127 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-Q2AG-0011-R11A-SM-2HMKZ GTEx Tissue Sample Gene Expression Profiles -1.0 -2.15106 NFATC1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-QMRM-0008-SM-447B1 GTEx Tissue Sample Gene Expression Profiles 1.0 0.866971 H3K4me3_SK-N-SH_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null BV-173 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 obstructive lung disease GWASdb SNP-Disease Associations 1.0 0.349218 T84 GDSC Cell Line Gene Expression Profiles -1.0 -1.45094 KU812 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.911702 quipazine-2782 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null MCF-7 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.851489 likely GeneRIF Biological Term Annotations 1.0 null BRD-K20160406 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.24567 morphological abnormality of the central nervous system GWASdb SNP-Phenotype Associations 1.0 0.082459 abnormality of the genital system GWASdb SNP-Phenotype Associations 1.0 0.210151 SKLU1 CCLE Cell Line Gene CNV Profiles -1.0 -1.3321 H3K4me3_bronchial epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-X88G-0004-SM-47JZ6 GTEx Tissue Sample Gene Expression Profiles 1.0 1.35749 GTEX-QCQG-0008-SM-48U2G GTEx Tissue Sample Gene Expression Profiles 1.0 0.862579 POLR2A_IMR-90_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ventrolateral prefrontal cortex_21 pcw_M_12886 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.07916 MYC_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null KDM4A_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EP300_ES-Bruce4_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PLC/PRF/5 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.83916 GTEX-T5JC-0011-R7A-SM-32PME GTEx Tissue Sample Gene Expression Profiles -1.0 -1.0414 BRD-K47776393 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.39845 GTEX-Q2AG-0011-R6A-SM-2HML7 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.96223 subiculum, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.843304 VZ in subcallosal region Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.42263 resveratrol-622 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null mRNA_POU5F1_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells -1.0 null BRD-K61287439 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.04177 POU2F2 ENCODE Transcription Factor Targets 1.0 null Sarcoma_SARC_TCGA-DX-AB2J-01A-11R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K27me3_megakaryocyte_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAX_HeLa-S3_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27ac_fibroblast of lung_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_GM06990_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null BRD-K58779593 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.85141 GTEX-WHWD-0426-SM-3LK83 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.54103 cingulum bundle, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -2.72699 H3K4me3_astrocyte of the cerebellum_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null abnormality of cellular immune system GWASdb SNP-Phenotype Associations 1.0 0.089434 MAX_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Adrenocortical carcinoma_ACC_TCGA-OR-A5L9-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null lymphomas GeneRIF Biological Term Annotations 1.0 null 12782714-Figure2 GeneSigDB Published Gene Signatures 1.0 null POLR2A_GM12891_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null 19605494-TableS2 GeneSigDB Published Gene Signatures 1.0 null highly GeneRIF Biological Term Annotations 1.0 null HCC1954 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.921957 GTEX-WFJO-0002-SM-3P61X GTEx Tissue Sample Gene Expression Profiles 1.0 1.50243 STAT3 MotifMap Predicted Transcription Factor Targets 1.0 null H3K4me3_fibroblast of gingiva_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null NR3C1_A549_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCC1171 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.934867 CEBPB ENCODE Transcription Factor Targets 1.0 null GTEX-QDT8-0626-SM-48TYW GTEx Tissue Sample Gene Expression Profiles 1.0 1.0239 BRD-K33438042 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.00468 GTEX-XOTO-0011-R9A-SM-4GICI GTEx Tissue Sample Gene Expression Profiles -1.0 -1.25968 GTEX-RU1J-0826-SM-46MUU GTEx Tissue Sample Gene Expression Profiles 1.0 1.30472 BRD-K37919122 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.43493 NCI-H889 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -2.36707 ATF2_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-SUCS-0002-SM-3NMAJ GTEx Tissue Sample Gene Expression Profiles 1.0 1.55182 Crus II, left, paravermis Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.923667 ZNF143 ENCODE Transcription Factor Targets 1.0 null HS 675.T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.882757 oculomotor nuclear complex, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.824008 POLR2AphosphoS5_SK-N-MC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null ATF3 ENCODE Transcription Factor Targets 1.0 null abnormality of nervous system morphology GWASdb SNP-Phenotype Associations 1.0 0.073134 NCI-H82 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 GTEX-RNOR-0526-SM-2TF4O GTEx Tissue Sample Gene Expression Profiles -1.0 -1.2424 STAT1 ENCODE Transcription Factor Targets 1.0 null Lung adenocarcinoma_LUAD_TCGA-55-8616-01A-11R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null abnormality of the humeral diaphysis GWASdb SNP-Phenotype Associations 1.0 1.25845 abnormality of the nervous system GWASdb SNP-Phenotype Associations 1.0 0.121577 ethisterone-4340 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null BRD-K92239253 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.3245 H3K4me3_GM12875_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K27me3_cardiac mesoderm_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null organ system cancer GWASdb SNP-Disease Associations 1.0 0.140417 H3K9ac_NT2-D1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K27me3_NT2-D1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K9ac_ES-Bruce4_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null EFM-192A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.58194 C3A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.963036 H3K4me3_mammary epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K9ac_myotube_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_fibroblast of pedal digit skin_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null lymphopenia GWASdb SNP-Disease Associations 1.0 0.588054 hippocampus (hippocampal formation)_1 yrs_F_12830 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.849416 BRD-K56778317 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.77582 outer SZ in caudal midinferior temporal cortex (area TF) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.828015 BRD-K24752397 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.08751 KYSE-450 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.16598 BRD-K83270266 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.29135 H-89-6878 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null SPI1_GM12891_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null PPARD-23208498-MDA-MB-231-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-DU-A76L-01A-11R-A32Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K91459693 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.54517 ronidazole-7131 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null NCI-H23 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.24894 GTEX-NL4W-0011-R5a-SM-2I3GD GTEx Tissue Sample Gene Expression Profiles -1.0 -0.980835 H3K4me3_kidney_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null MFM-223 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.915517 CREB1_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null striatum_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.88994 quinostatin-973 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me3_WI38_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null pcgf2_17452456_medulloblastoma_lof_human_gpl570_gds2724 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations -1.0 -0.060647 GTEX-U3ZM-0002-SM-3NMDM GTEx Tissue Sample Gene Expression Profiles 1.0 1.47675 abnormality of the pleura GWASdb SNP-Phenotype Associations 1.0 1.01655 GTEX-RWS6-1026-SM-47JXD GTEx Tissue Sample Gene Expression Profiles 1.0 0.92442 amrinone-2724 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null TE-9 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 TRIM28_HEK293_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ovarian disease GWASdb SNP-Disease Associations 1.0 0.409209 Brain Lower Grade Glioma_LGG_TCGA-HT-7477-01B-11R-A28M-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K10189430 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.20379 NCI-H1395 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 Liver Neoplasms CTD Gene-Disease Associations 1.0 1.07804 GTEX-XUW1-0126-SM-4BOOQ GTEx Tissue Sample Gene Expression Profiles 1.0 1.09689 urethral sphincter sclerosis GWASdb SNP-Phenotype Associations 1.0 1.25845 H3K4me3_B cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null NCI-H1304 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 AtrioventricularNode BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 1.00214 pathogenesis GeneRIF Biological Term Annotations 1.0 null BRD-K28414977 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.21106 POLR2A_brain_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TAF1_GM12892_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung Neoplasms CTD Gene-Disease Associations 1.0 1.49609 ZNF263_HEK293_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null 5255229-949 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-A4CD-01A-21R-A24Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-W3-A824-06A-21R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null fasudil-436 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null RELA_GM12891_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SPI1 ChEA Transcription Factor Targets 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4878-01A-01R-1305-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_SK-N-SH_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2AphosphoS5_GM12892_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null LB647-SCLC GDSC Cell Line Gene Expression Profiles -1.0 -1.76414 20436685-ST4-1 GeneSigDB Published Gene Signatures 1.0 null CHD1_IMR-90_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-V1D1-0003-SM-3NMDP GTEx Tissue Sample Gene Expression Profiles 1.0 1.50487 Brain Lower Grade Glioma_LGG_TCGA-DU-6402-01A-11R-1708-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hodgkin lymphoma GWASdb SNP-Phenotype Associations 1.0 1.15423 REST_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null gossypol-4296 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me3_HEK293_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-N7MS-0011-R6a-SM-2HMJ4 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.965565 Mesothelioma_MESO_TCGA-TS-A7P0-01A-11R-A34F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_fibroblast of the aortic adventitia_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-T8EM-0826-SM-4DM76 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.915376 GTEX-Q2AG-0326-SM-48U1O GTEx Tissue Sample Gene Expression Profiles 1.0 1.03101 H3K4me3_G1E_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null SW 480 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.30154 costochondral joint sclerosis GWASdb SNP-Phenotype Associations 1.0 1.25845 GTEX-XBED-0526-SM-47JY3 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.36825 MEF2C_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SIN3A_H1-hESC_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null BCL3_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-X62O-0008-SM-46MU5 GTEx Tissue Sample Gene Expression Profiles 1.0 2.22062 BHLHE40_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K80442083 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.04578 PML MSigDB Cancer Gene Co-expression Modules 1.0 null isometheptene-5502 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-P44H-2426-SM-2XCEJ GTEx Tissue Sample Gene Expression Profiles -1.0 -0.992298 HCC1428 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.950938 ezh2_22267199_heart_lof_mouse_gpl6246_gds4309 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations -1.0 -0.158821 TC-71 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 GTEX-QVJO-0011-R6A-SM-2S1QN GTEx Tissue Sample Gene Expression Profiles -1.0 -0.851963 Diabetes Mellitus, Type 1 HuGE Navigator Gene-Phenotype Associations 1.0 null Lung adenocarcinoma_LUAD_TCGA-49-4486-01A-01R-1206-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null riluzole-2295 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Sickle Cell Anemia_Endothelial cell_GSE9877 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 2.19877 vascular disease GWASdb SNP-Disease Associations 1.0 0.150601 bronchial disease GWASdb SNP-Disease Associations 1.0 0.588054 mRNA_OTX2_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells -1.0 null H3K4me1_MEL cell line_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null RT4 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.02988 amygdaloid complex_15 yrs_M_12299 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.01664 SK-BR-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.73773 JEKO1 CCLE Cell Line Gene CNV Profiles -1.0 -1.8988 0175029-0000-4716 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me3_WI38_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-S7SE-0011-R2A-SM-2XCDC GTEx Tissue Sample Gene Expression Profiles -1.0 -0.828133 ZR-75-30 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.05826 tinidazole-4548 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me1_heart_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_GM18526_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null abnormal eye morphology GWASdb SNP-Phenotype Associations 1.0 0.194623 sirolimus-5204 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null HD-MY-Z COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 BRD-K67985577 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.07015 Kidney renal papillary cell carcinoma_KIRP_TCGA-SX-A7SL-01A-11R-A355-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null FOS_MCF 10A_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null dorsolateral prefrontal cortex_37 pcw_M_263195015 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.980259 TAF1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27ac_bone marrow macrophage_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-WFJO-0926-SM-4LVM2 GTEx Tissue Sample Gene Expression Profiles 1.0 0.863235 Head and Neck squamous cell carcinoma_HNSC_TCGA-BA-A6D8-01A-31R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null express GeneRIF Biological Term Annotations 1.0 null BRD-K60030763 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.43583 GTEX-U8XE-0426-SM-3DB91 GTEx Tissue Sample Gene Expression Profiles 1.0 0.867735 abnormal appendicular skeleton morphology GWASdb SNP-Phenotype Associations 1.0 1.16074 E2F6 ENCODE Transcription Factor Targets 1.0 null BRD-K65245206 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.33676 calvarial osteosclerosis GWASdb SNP-Phenotype Associations 1.0 1.25845 RCOR1_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCC2935 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.2537 GTEX-SNOS-0003-SM-3NMAO GTEx Tissue Sample Gene Expression Profiles 1.0 2.38961 VZ in thalamic region Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -2.8659 GTEX-WHPG-0004-SM-3NMDO GTEx Tissue Sample Gene Expression Profiles 1.0 1.55692 abnormalities GeneRIF Biological Term Annotations 1.0 null SIG-M5 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.901244 KDM5A_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K14241686 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.44289 GTEX-PLZ6-0226-SM-3P61I GTEx Tissue Sample Gene Expression Profiles 1.0 0.843501 hematopoietic system disease GWASdb SNP-Disease Associations 1.0 0.094176 PHF8_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null posterior (caudal) superior temporal cortex (area 22c)_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.843544 Kidney renal papillary cell carcinoma_KIRP_TCGA-AL-3473-01A-01R-1193-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null stratum pyramidale of rostral CA1 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.41572 beta-escin-4544 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null troglitazone-370 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null EP300_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27ac_ES-Bruce4_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H2AFZ_fibroblast of lung_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Prostatic Neoplasms HuGE Navigator Gene-Phenotype Associations 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-56-5898-01A-11R-1635-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CHD7 ENCODE Transcription Factor Targets 1.0 null POLR2A_GM12892_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-FW-A3R5-06A-11R-A239-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CPC-N GDSC Cell Line Gene Expression Profiles 1.0 2.39381 SIN3A_SK-N-SH_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-CS-6666-01A-11R-1896-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CUX1 ENCODE Transcription Factor Targets 1.0 null laterodorsal subdivision of area 8 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.1857 MSTO-211H COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 posteroventral (inferior) parietal cortex_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.4518 BRD-K29975122 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.32016 abnormality of the kidney GWASdb SNP-Phenotype Associations 1.0 0.385092 19286929-SuppTable2q GeneSigDB Published Gene Signatures 1.0 null abnormality of radial diaphysis GWASdb SNP-Phenotype Associations 1.0 1.25845 CHD1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Primary hematopoietic stem cells G-CSF-mobilized Female RO_01508 Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles 1.0 0.962944 BRD-K81665173 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.56905 MAX_SK-N-SH_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XLM4-0011-R2B-SM-4AT5Z GTEx Tissue Sample Gene Expression Profiles -1.0 -1.11317 H3K4me3_Brain Substantia Nigra Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-75-7031-01A-11R-1949-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_WI38_hg19_4 ENCODE Histone Modification Site Profiles 1.0 null abdominal symptom GWASdb SNP-Phenotype Associations 1.0 0.271437 abnormal bone structure GWASdb SNP-Phenotype Associations 1.0 1.09492 nucleus LOCATE Predicted Protein Localization Annotations 1.0 null BRD-K74767736 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.15414 BRD-K29077209 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.27173 H3K4me3_HeLa-S3_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null basomedial nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.39977 propantheline bromide-3013 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-T6MN-2526-SM-32PMN GTEx Tissue Sample Gene Expression Profiles -1.0 -1.66463 STAT3_MCF 10A_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null JAK2_DN.V1 MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations -1.0 null NELFE_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null dactinomycin_mus musculus_gpl1261_tristerapolin-deficient_gds2456 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null BRD-K47275094 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.67759 BRD-K46313713 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.48558 COLO 320DM Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 3.23445 BRD-K03312699 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.47247 MYC_K562_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null EVSAT CCLE Cell Line Gene Expression Profiles 1.0 1.41692 JAK3 MSigDB Cancer Gene Co-expression Modules 1.0 null EZH2 ENCODE Transcription Factor Targets 1.0 null H3K4me3_bronchial epithelial cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XUYS-0002-SM-47JXL GTEx Tissue Sample Gene Expression Profiles 1.0 2.02749 ZC3H11A_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null imatinib_homo sapiens_gpl96_gds3043 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null NFE2L2 ChEA Transcription Factor Targets 1.0 null SPI1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-TKQ1-0003-SM-3NMAE GTEx Tissue Sample Gene Expression Profiles 1.0 1.35894 BRD-A31916785 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.00241 BRD-K18117162 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.09892 BRD-K23316938 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 4.50922 BRD-A37523642 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.9401 Ovary BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 0.95381 blebbistatin-954 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null ETS1_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null abnormal axial skeleton morphology GWASdb SNP-Phenotype Associations 1.0 0.477558 H3K4me1_ES-Bruce4_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null abnormality of forearm bone GWASdb SNP-Phenotype Associations 1.0 1.25845 CA4 field, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.24746 HA-E2F1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null homosalate-4355 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null central nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.991378 hypoglossal nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.31352 MAX_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K30699866 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.82521 GTEX-X5EB-1826-SM-4E3K8 GTEx Tissue Sample Gene Expression Profiles 1.0 1.26274 abnormality of the upper urinary tract GWASdb SNP-Phenotype Associations 1.0 0.385092 MS-1 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 tinidazole-4370 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null POU2F2_GM12878_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_keratinocyte_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-R55F-1226-SM-2TF59 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.74699 BRD-K96154586 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.78108 H3K4me3_osteoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null BRD-K33767223 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.02133 GTEX-XUW1-1726-SM-4BOOZ GTEx Tissue Sample Gene Expression Profiles -1.0 -2.89867 HELA BioGPS Cell Line Gene Expression Profiles -1.0 -1.15478 GTEX-S33H-1626-SM-4AD68 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.836351 inherited metabolic disorder GWASdb SNP-Disease Associations 1.0 0.239479 rnf2_20805357_u2os_osteosarcoma_lof_human_gpl570_gse23035 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.559144 Kidney renal papillary cell carcinoma_KIRP_TCGA-AL-7173-01A-11R-2139-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null EFM192A CCLE Cell Line Gene Expression Profiles 1.0 1.67867 BRD-K11573765 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.24357 SW 527 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.15548 HCC2935 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.941632 EP300_GM12878_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null 6-bromoindirubin-3'-oxime-6589 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me3_epithelial cell of esophagus_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null NCIH2106 CCLE Cell Line Gene CNV Profiles -1.0 -1.47481 yy1_22711985_skeletal_muscle_lof_mouse_gpl8321_gse39009 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.598846 abnormal renal morphology GWASdb SNP-Phenotype Associations 1.0 0.810997 upregulated GeneRIF Biological Term Annotations 1.0 null generalized osteosclerosis GWASdb SNP-Phenotype Associations 1.0 1.25845 BRD-K06958718 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.70163 anterior (rostral) cingulate (medial prefrontal) cortex_11 yrs_F_12289 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.837809 CAL-148 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.16016 Prostate adenocarcinoma_PRAD_TCGA-V1-A8MM-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-PX3G-2426-SM-48TZZ GTEx Tissue Sample Gene Expression Profiles 1.0 0.84215 GTEX-WFON-0326-SM-3GIKX GTEx Tissue Sample Gene Expression Profiles -1.0 -1.24981 Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-A642-01A-12R-A30B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-S4P3-1326-SM-4AD6V GTEx Tissue Sample Gene Expression Profiles 1.0 0.894534 leukocyte disease GWASdb SNP-Disease Associations 1.0 0.297431 CAOV-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.891314 Liver hepatocellular carcinoma_LIHC_TCGA-G3-AAV5-01A-11R-A37K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null isoxicam-1698 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null MYC_MCF 10A_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null glucose GeneRIF Biological Term Annotations 1.0 null NCI-H211 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 Liver hepatocellular carcinoma_LIHC_TCGA-CC-A7II-01A-11R-A33J-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-RWS6-1126-SM-47JXC GTEx Tissue Sample Gene Expression Profiles -1.0 -0.97424 BRD-A78125048 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.46607 nonsyndromic cleft lip with or without cleft palate GAD Gene-Disease Associations 1.0 null allantoin-1678 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null POLR2A_GM12878_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null abnormality of the upper arm GWASdb SNP-Phenotype Associations 1.0 0.942765 GTEX-NL3H-0011-R7a-SM-2I3G5 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.04121 GTEX-X4XX-0011-R11A-SM-46MWQ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.28358 GTEX-XLM4-0011-R4B-SM-4AT5C GTEx Tissue Sample Gene Expression Profiles -1.0 -0.851127 E2F6_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null abnormal genital system morphology GWASdb SNP-Phenotype Associations 1.0 0.231589 Primary hematopoietic stem cells G-CSF-mobilized Female RO_01549 Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles 1.0 1.03463 required GeneRIF Biological Term Annotations 1.0 null regulator GeneRIF Biological Term Annotations 1.0 null located GeneRIF Biological Term Annotations 1.0 null GTEX-OXRO-0011-R2A-SM-3NB1W GTEx Tissue Sample Gene Expression Profiles -1.0 -0.911715 GTEX-WVLH-0011-R7A-SM-3MJFB GTEx Tissue Sample Gene Expression Profiles -1.0 -1.05787 Mesothelioma_MESO_TCGA-LK-A4NY-01A-11R-A34F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-E7-A4XJ-01A-11R-A26T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null STAT3_MCF 10A_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K48188521 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.76852 GTEX-RU72-0011-R7A-SM-2TF5U GTEx Tissue Sample Gene Expression Profiles -1.0 -1.08756 H3K27ac_liver_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null SNU-16 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.6699 upper (rostral) rhombic lip Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.82142 CPC-N COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 GTEX-WHPG-0826-SM-3NMBF GTEx Tissue Sample Gene Expression Profiles -1.0 -0.829655 MXI1_IMR-90_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-UPK5-0326-SM-3GAF3 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.29357 End-stage renal disease GWAS Catalog SNP-Phenotype Associations 1.0 0.165905 NCI-H2171 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 neurod1_17630985_pineal_gland_lof_mouse_gpl1261_gds3000 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.004368 abnormality of the male genitalia GWASdb SNP-Phenotype Associations 1.0 0.313272 BRD-K61553312 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.23196 GTEX-XLM4-0011-R6A-SM-4AT4B GTEx Tissue Sample Gene Expression Profiles -1.0 -1.19025 IKBKG MSigDB Cancer Gene Co-expression Modules 1.0 null MSTO-211H GDSC Cell Line Gene Expression Profiles 1.0 2.34439 GTEX-P44H-0011-R11A-SM-2XCER GTEx Tissue Sample Gene Expression Profiles -1.0 -1.42378 BRD-K50191826 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.07875 SIN3A_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-SSA3-0008-SM-47JWJ GTEx Tissue Sample Gene Expression Profiles 1.0 1.16674 GTEX-T6MN-0011-R11A-SM-32QOX GTEx Tissue Sample Gene Expression Profiles -1.0 -2.35805 Lung squamous cell carcinoma_LUSC_TCGA-33-4566-01A-01R-1443-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-S7SF-0001-SM-3K2BE GTEx Tissue Sample Gene Expression Profiles 1.0 2.56897 KARPAS-1106P COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 glimepiride-4973 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K27ac_K562_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null dipivefrine-7124 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-T2IS-0011-R5A-SM-32QP4 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.996612 sulfapyridine-7151 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null pancreatic cancer GWASdb SNP-Disease Associations 1.0 0.976083 GTEX-N7MS-1626-SM-3LK5F GTEx Tissue Sample Gene Expression Profiles -1.0 -0.929392 TAF1_GM12891_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MTA3_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null RFX5_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K83229680 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.10851 rotenone-5915 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null SK-PN-DW COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 TBP ENCODE Transcription Factor Targets 1.0 null H3K4me3_fibroblast of pulmonary artery_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null CHD1_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Rectum adenocarcinoma_READ_TCGA-DY-A1H8-01A-21R-A155-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_Adult Kidney Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6948-01A-11R-1915-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K96057608 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.75303 FOXA1 ENCODE Transcription Factor Targets 1.0 null GTEX-QCQG-1426-SM-48U22 GTEx Tissue Sample Gene Expression Profiles 1.0 1.0614 TFAP2C_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null DMS153 CCLE Cell Line Gene Expression Profiles -1.0 -2.18106 Rectum adenocarcinoma_READ_TCGA-DY-A1DD-01A-21R-A155-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K19168437 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.3104 H3K27me3_cardiac mesoderm_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_GM12878_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAFK ENCODE Transcription Factor Targets 1.0 null BRD-K05584347 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.97825 PTSD - Post-traumatic stress disorder_Peripheral blood mononuclear cell_GSE860 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 1.59224 GTEX-O5YV-1126-SM-3LK73 GTEx Tissue Sample Gene Expression Profiles 1.0 1.64099 HUP-T3 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 STAT5A_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCIH2170 CCLE Cell Line Gene CNV Profiles 1.0 2.82437 H3K4me3_erythroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null EZH2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-QV31-0226-SM-447BO GTEx Tissue Sample Gene Expression Profiles -1.0 -1.52085 MTA3_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BCL3 ENCODE Transcription Factor Targets 1.0 null GTEX-WFG7-0001-SM-3P61S GTEx Tissue Sample Gene Expression Profiles 1.0 0.957691 BRD-K87131514 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.73538 tetrandrine-5821 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null suloctidil-5021 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null seizures GWASdb SNP-Phenotype Associations 1.0 0.573361 picrotoxinin-2816 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null PSN1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.03516 enoxacin-4655 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-UPK5-0008-SM-4IHJD GTEx Tissue Sample Gene Expression Profiles 1.0 0.937591 CAOV-4 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 MAX_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PPARG-20887899-3T3-L1 PREADIPOCYTE CELLS-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null BRCA1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H524 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 RAD21_H1-hESC_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2AphosphoS5_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null ZBTB7A_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null ZBTB7A_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney Failure, Chronic HuGE Navigator Gene-Phenotype Associations 1.0 null PSN1 GDSC Cell Line Gene Expression Profiles 1.0 1.86554 HCC461 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.54994 BRD-K85622666 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.21465 CTCF_fibroblast of upper leg skin_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-UTHO-0011-R11A-SM-3GIJE GTEx Tissue Sample Gene Expression Profiles -1.0 -1.826 BRD-K90673570 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.01934 NCI H322M BioGPS Cell Line Gene Expression Profiles -1.0 -0.892031 IX, left, lateral hemisphere Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.26652 SG in dorsomedial parietal cortex (area 7m) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.862276 RAD21_SK-N-SH_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null rna GeneRIF Biological Term Annotations 1.0 null BRD-K83670600 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.14929 BRD-K43271856 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.41466 BRD-A78982410 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.19066 pallidohypothalamic nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.25605 KP-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.06186 E2F6_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-P4PP-2426-SM-3P61L GTEx Tissue Sample Gene Expression Profiles 1.0 0.930009 5109870-904 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-WVLH-0011-R5A-SM-3MJFW GTEx Tissue Sample Gene Expression Profiles -1.0 -1.25655 GTEX-UJHI-0426-SM-3DB8Y GTEx Tissue Sample Gene Expression Profiles -1.0 -1.52136 BRD-K02061146 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.07661 BRD-K93747042 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.02602 ATF2_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WWYW-3026-SM-3NB36 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.965529 abnormality of the coronary arteries GWASdb SNP-Phenotype Associations 1.0 0.281883 overnutrition GWASdb SNP-Disease Associations 1.0 0.489572 JURKAT, CLONE E6-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.17691 GTEX-NPJ8-2626-SM-2D7W2 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.5923 GTEX-OIZH-2026-SM-3NB1M GTEx Tissue Sample Gene Expression Profiles 1.0 1.37063 GTEX-XYKS-0002-SM-4BRWN GTEx Tissue Sample Gene Expression Profiles 1.0 1.30824 NRF1 ENCODE Transcription Factor Targets 1.0 null GTEX-X4XY-0626-SM-4E3IN GTEx Tissue Sample Gene Expression Profiles 1.0 0.889582 H3K27ac_fibroblast of lung_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null CPCN CCLE Cell Line Gene CNV Profiles 1.0 1.75778 GTEX-O5YT-0326-SM-32PKA GTEx Tissue Sample Gene Expression Profiles -1.0 -1.11958 GTEX-Q2AG-2826-SM-2HMJQ GTEx Tissue Sample Gene Expression Profiles -1.0 -2.89867 Pancreatic Neoplasms HuGE Navigator Gene-Phenotype Associations 1.0 null GTEX-QCQG-0226-SM-48U28 GTEx Tissue Sample Gene Expression Profiles 1.0 1.08159 3-hydroxy-DL-kynurenine-1109 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null pirenperone-5274 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null accumulation GeneRIF Biological Term Annotations 1.0 null BRD-K58194737 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.64594 orbital frontal cortex_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.933143 HGC-27 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.155 Brain Lower Grade Glioma_LGG_TCGA-DB-5277-01A-01R-1470-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TE-4 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 ABC-1 GDSC Cell Line Gene Expression Profiles -1.0 -1.53961 GTEX-TKQ2-0004-SM-3NMAC GTEx Tissue Sample Gene Expression Profiles 1.0 1.35082 Kidney Chromophobe_KICH_TCGA-KL-8327-01A-11R-2315-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-RC-A7SF-01A-11R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_fibroblast of the aortic adventitia_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null POLR2AphosphoS5_GM12891_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K12175788 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.21384 red nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.08242 disease GWASdb SNP-Disease Associations 1.0 0.149403 HS-578-T COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 KE-37 GDSC Cell Line Gene Expression Profiles -1.0 -1.9875 abnormality of the female genitalia GWASdb SNP-Phenotype Associations 1.0 0.144539 MITF ChEA Transcription Factor Targets 1.0 null H3K4me1_limb_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null abnormality of limb bone GWASdb SNP-Phenotype Associations 1.0 1.08728 NCI-H1975 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.42931 NCIH1436 CCLE Cell Line Gene Expression Profiles -1.0 -1.87647 end stage renal failure GWASdb SNP-Disease Associations 1.0 1.14463 CHD2 ENCODE Transcription Factor Targets 1.0 null CREB1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4642-01B-01R-1305-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null abnormal respiratory system morphology GWASdb SNP-Phenotype Associations 1.0 0.189207 19061838-TableS15 GeneSigDB Published Gene Signatures 1.0 null GTEX-XUZC-1626-SM-4BRVP GTEx Tissue Sample Gene Expression Profiles 1.0 0.907875 GTEX-QV44-0008-SM-447AX GTEx Tissue Sample Gene Expression Profiles 1.0 1.0382 CTCF_keratinocyte_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K9ac_H1 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null X, left, lateral hemisphere Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.96585 types GeneRIF Biological Term Annotations 1.0 null cerebellar cortex_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.884143 E2F4 ENCODE Transcription Factor Targets 1.0 null proadifen-5807 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null MFM-223 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 PAX5 ENCODE Transcription Factor Targets 1.0 null TCF12_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null OVCAR8 BioGPS Cell Line Gene Expression Profiles -1.0 -1.05315 H3K4me3_fibroblast of pulmonary artery_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null SNU869 CCLE Cell Line Gene CNV Profiles -1.0 -1.90956 stratum pyramidale of caudal CA2 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.55577 RFX5_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HDAC2 ENCODE Transcription Factor Targets 1.0 null GTEX-S7SE-0008-SM-33HB1 GTEx Tissue Sample Gene Expression Profiles 1.0 0.949828 23132/87 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.934159 GTEX-X261-0011-R11A-SM-4E3JY GTEx Tissue Sample Gene Expression Profiles -1.0 -1.28817 TAF7_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null gata1_15860665_megakaryocytes_lof_mouse_gpl1261_gds1245 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.098149 deletion GeneRIF Biological Term Annotations 1.0 null primary auditory cortex (core)_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.925554 abnormality of female internal genitalia GWASdb SNP-Phenotype Associations 1.0 0.144539 BRD-K64571715 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.09118 BRD-K20799008 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.96806 TEF-1 MotifMap Predicted Transcription Factor Targets 1.0 null abnormality of immune system physiology GWASdb SNP-Phenotype Associations 1.0 0.10677 15691381-Table5 GeneSigDB Published Gene Signatures 1.0 null cardiovascular GAD High Level Gene-Disease Associations 1.0 0.305726 GTEX-UPIC-0002-SM-3NMDC GTEx Tissue Sample Gene Expression Profiles 1.0 1.55271 YMB-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.834841 MAX_myocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-V955-0004-SM-3NMDH GTEx Tissue Sample Gene Expression Profiles 1.0 1.52453 central portion of GPi Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.40948 JUND_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_limb_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null abnormality of the eye GWASdb SNP-Phenotype Associations 1.0 0.152051 Hodgkin Disease HuGE Navigator Gene-Phenotype Associations 1.0 null BRD-K67665252 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -5.03035 POLR2AphosphoS5_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null ES-I3 Cells Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles -1.0 -0.851736 posterior (caudal) superior temporal cortex (area 22c)_19 pcw_F_12885 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.827226 BRD-K43603649 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.06629 fluocinonide-3933 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null leukopenia GWASdb SNP-Disease Associations 1.0 0.349218 H3K4me3_fibroblast of lung_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null STAT5A ENCODE Transcription Factor Targets 1.0 null 18794137-SuppTable1a GeneSigDB Published Gene Signatures 1.0 null GTEX-T2IS-0426-SM-32QPE GTEx Tissue Sample Gene Expression Profiles -1.0 -1.79678 POLR2A_small intestine_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-R55F-1726-SM-2TF4R GTEx Tissue Sample Gene Expression Profiles 1.0 0.951764 YMB-1-E Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.906143 pvt1derived GeneRIF Biological Term Annotations 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-GV-A40E-01A-12R-A23N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZR-75-30 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 hematological GAD High Level Gene-Disease Associations 1.0 0.298214 UBTF_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WI4N-1426-SM-3LK7H GTEx Tissue Sample Gene Expression Profiles 1.0 1.08898 Prostate adenocarcinoma_PRAD_TCGA-KK-A8IF-01A-11R-A36G-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2A_MEL cell line_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null mediodorsal nucleus of thalamus_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -2.22809 NOS-1 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 H3K27ac_CD8 Naive Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null H3K4me1_lung_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTF2F1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null mRNA_RHOX6_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null MYC_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null AHR ChEA Transcription Factor Targets 1.0 null GTEX-X4XY-0011-R8A-SM-46MVC GTEx Tissue Sample Gene Expression Profiles -1.0 -1.14372 abnormality of lymphocytes GWASdb SNP-Phenotype Associations 1.0 0.500231 NCIH1876 CCLE Cell Line Gene Expression Profiles -1.0 -1.97372 SUM 159PT Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.61521 BRD-K77591784 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.25674 Cell Transformation, Neoplastic CTD Gene-Disease Associations 1.0 1.03752 CPC-N Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.95133 HDAC6 ENCODE Transcription Factor Targets 1.0 null CHD2_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null brain GTEx Tissue Gene Expression Profiles -1.0 -1.03217 EP300_GM12878_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null GSK3B_knockdown_202_GDS4305 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -1.55976 abnormality of male external genitalia GWASdb SNP-Phenotype Associations 1.0 0.332291 cisplatin_homo sapiens_gpl570_gds3910 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null BRD-K83238251 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.69767 BMI1-23680149-NPCS-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null prognostic GeneRIF Biological Term Annotations 1.0 null posteroventral (inferior) parietal cortex_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.859432 Hemoglobin A, Glycosylated dbGAP Gene-Trait Associations 1.0 0.08379 CTCF_bone marrow macrophage_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_Mobilized CD34 Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null H2AFZ_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null epilepsy syndrome GWASdb SNP-Disease Associations 1.0 0.669341 WIDR Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.861363 Head and Neck squamous cell carcinoma_HNSC_TCGA-D6-A6ES-01A-12R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K92432769 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.55076 SK-GT-2 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 GTEX-QVUS-0626-SM-447CC GTEx Tissue Sample Gene Expression Profiles 1.0 0.884578 Hyperplasia CTD Gene-Disease Associations 1.0 1.36504 Skin Cutaneous Melanoma_SKCM_TCGA-GN-A267-06A-21R-A18T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-RNOR-2226-SM-2TF5O GTEx Tissue Sample Gene Expression Profiles -1.0 -1.39626 GTEX-NL3H-0011-R11A-SM-2I3E6 GTEx Tissue Sample Gene Expression Profiles -1.0 -2.89867 TestisGermCell BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -0.889602 GTEX-S341-1526-SM-4AD6K GTEx Tissue Sample Gene Expression Profiles 1.0 1.17889 NCI-H2171 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.861004 genotype GeneRIF Biological Term Annotations 1.0 null sulindac-5103 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null HCC1599 CCLE Cell Line Gene CNV Profiles -1.0 -1.53122 GTEX-T5JC-0011-R5A-SM-32PLK GTEx Tissue Sample Gene Expression Profiles -1.0 -0.996136 IV, left, paravermis Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.999693 GTEX-PVOW-0011-R5A-SM-32PL7 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.25818 Liver hepatocellular carcinoma_LIHC_TCGA-DD-A3A3-01A-11R-A22L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null abnormality of the cardiovascular system GWASdb SNP-Phenotype Associations 1.0 0.859368 EZH2_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null LOXIMVI GDSC Cell Line Gene Expression Profiles 1.0 1.5023 BRD-K89820077 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.63177 H3K23ac_H9 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null H3K4me3_ES-Bruce4_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null ERG ChEA Transcription Factor Targets 1.0 null ZMIZ1 ENCODE Transcription Factor Targets 1.0 null GTEX-WL46-0011-R5A-SM-3LK6V GTEx Tissue Sample Gene Expression Profiles -1.0 -1.13008 NCIH524 CCLE Cell Line Gene Expression Profiles 1.0 2.25277 DDX11 MSigDB Cancer Gene Co-expression Modules 1.0 null POLR2AphosphoS2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCIH1395 CCLE Cell Line Gene Expression Profiles 1.0 1.73183 MAX_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K90887068 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 4.37406 H3K4me3_thymus_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null NFYB ENCODE Transcription Factor Targets 1.0 null IRF4_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SNU-387 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.21829 cancer GWASdb SNP-Disease Associations 1.0 0.159306 coronary artery disease GWASdb SNP-Phenotype Associations 1.0 0.529494 BRD-K07300437 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.13177 breast GeneRIF Biological Term Annotations 1.0 null GTEX-T6MN-0002-SM-3NMAH GTEx Tissue Sample Gene Expression Profiles 1.0 1.11462 Kidney renal papillary cell carcinoma_KIRP_TCGA-Q2-A5QZ-01A-11R-A28H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null KMS18 CCLE Cell Line Gene Expression Profiles 1.0 1.37612 GTEX-T5JW-0008-SM-4DM5X GTEx Tissue Sample Gene Expression Profiles 1.0 1.67366 NCIH684 CCLE Cell Line Gene Expression Profiles -1.0 -1.49012 VZ in hypothalamic portion Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.74454 POLR2A_thymus_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null malignant mesothelioma GWASdb SNP-Disease Associations 1.0 1.16349 MYC_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MT4 MSigDB Cancer Gene Co-expression Modules 1.0 null BRD-K30566330 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.13183 primary somatosensory cortex (area S1, areas 3,1,2)_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.974976 LP-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.14864 IST-SL2 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 urethral obstruction GWASdb SNP-Phenotype Associations 1.0 1.25845 Lung squamous cell carcinoma_LUSC_TCGA-21-5787-01A-01R-1635-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ribostamycin-2705 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-XBED-0226-SM-47JY8 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.847163 eucatropine-2556 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null BRD-K58017833 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.42097 VZ in midlateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.16058 sp3_17923686_e12dot5_heart_lof_mouse_gpl1261_gds3058 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.098254 BRD-K86192746 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.38204 metabolic GAD High Level Gene-Disease Associations 1.0 0.308259 novobiocin-4569 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null BRD-K69468381 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.68666 pancreas GTEx Tissue Gene Expression Profiles -1.0 -1.04261 H3K4me3_cardiac mesoderm_hg19_5 ENCODE Histone Modification Site Profiles 1.0 null chronic kidney failure GWASdb SNP-Disease Associations 1.0 0.484681 BRD-K21124684 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.16468 metoclopramide-4285 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null candidate GeneRIF Biological Term Annotations 1.0 null GTEX-VUSG-0008-SM-4KL24 GTEx Tissue Sample Gene Expression Profiles 1.0 1.05607 BRD-K91577886 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.23854 cerebellar cortex_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.54964 REST_PFSK-1_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-NPJ7-0011-R5a-SM-33HBK GTEx Tissue Sample Gene Expression Profiles -1.0 -1.40347 GR-M Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.909408 NCI-H2171 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.52373 cortisone-7416 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me3_HL-60_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null ATF3_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null PML_MCF-7_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SNU685 CCLE Cell Line Gene CNV Profiles 1.0 1.60106 Liver hepatocellular carcinoma_LIHC_TCGA-RC-A6M3-01A-11R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Brain Lower Grade Glioma_LGG_TCGA-TM-A84B-01A-11R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-RM2N-0326-SM-48FD8 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.30572 musculoskeletal system disease GWASdb SNP-Disease Associations 1.0 0.193214 BRD-K16525290 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.41125 CHD4 ENCODE Transcription Factor Targets 1.0 null CTCF_fibroblast of skin of abdomen_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null ARNT-22903824-MCF7-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null GFI1B-20887958-HPC-7-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null JUND_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null choroidal sclerosis GWASdb SNP-Phenotype Associations 1.0 1.25845 GTEX-WL46-0926-SM-3LK7T GTEx Tissue Sample Gene Expression Profiles -1.0 -1.02378 GTEX-WEY5-0001-SM-3P61Z GTEx Tissue Sample Gene Expression Profiles 1.0 1.51517 RFX5_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null obesity GWASdb SNP-Disease Associations 1.0 1.17101 GTEX-S32W-1226-SM-4AD67 GTEx Tissue Sample Gene Expression Profiles 1.0 1.06912 GTEX-OIZG-1126-SM-2HMIU GTEx Tissue Sample Gene Expression Profiles -1.0 -0.839485 pioglitazone-5977 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null BRD-K32434600 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.07546 dementia GWASdb SNP-Disease Associations 1.0 0.372472 sensitivity GeneRIF Biological Term Annotations 1.0 null GTEX-P4PQ-1026-SM-3NMCN GTEx Tissue Sample Gene Expression Profiles -1.0 -0.932817 bone inflammation disease GWASdb SNP-Disease Associations 1.0 0.392278 H3K4me3_placenta_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K9ac_K562_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-WYBS-0926-SM-3NM94 GTEx Tissue Sample Gene Expression Profiles 1.0 1.0647 rheumatoid arthritis GWASdb SNP-Disease Associations 1.0 0.743048 GTEX-VJYA-1226-SM-3GIJ6 GTEx Tissue Sample Gene Expression Profiles 1.0 0.887183 abnormality of the lower urinary tract GWASdb SNP-Phenotype Associations 1.0 0.584959 BRD-K23292451 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.71931 H3ac_C2C12_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null KYSE-450 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.03423 H3K4me3_fibroblast of lung_hg19_4 ENCODE Histone Modification Site Profiles 1.0 null H3K27me3_erythroblast_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CX-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.04306 TBP_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2AphosphoS5_PFSK-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CORL24 CCLE Cell Line Gene Expression Profiles -1.0 -1.77166 BRD-K64767126 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.17787 KDM4A ENCODE Transcription Factor Targets 1.0 null 16,16-dimethylprostaglandin E2-6592 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null lymphoma GWASdb SNP-Disease Associations 1.0 0.588054 CHD2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_HepG2_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCIH2141 CCLE Cell Line Gene Expression Profiles -1.0 -2.42222 BRD-K87743988 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.58518 0175029-0000-7392 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K36me3_G1E_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K43918582 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.46453 WSUDLCL2 CCLE Cell Line Gene CNV Profiles -1.0 -1.48191 H3K4me3_cardiac fibroblast_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null BRD-K83754856 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.20586 GTEX-OXRL-0008-SM-3NB29 GTEx Tissue Sample Gene Expression Profiles 1.0 0.907346 PRDM14-21183938-MESC-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null BRD-K41709602 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.76715 Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-6228-01A-11R-1915-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung adenocarcinoma_LUAD_TCGA-MP-A4T8-01A-11R-A24X-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZNF143_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Pleural Neoplasms HuGE Navigator Gene-Phenotype Associations 1.0 null H2AFZ_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAX_MCF-7_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Neuro D MotifMap Predicted Transcription Factor Targets 1.0 null abnormality of skeletal morphology GWASdb SNP-Phenotype Associations 1.0 0.515319 H2AFZ_B cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SMC3 ENCODE Transcription Factor Targets 1.0 null raphe obscurus nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.14191 POLR2AphosphoS2_myocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lymphoma, Large B-Cell, Diffuse HuGE Navigator Gene-Phenotype Associations 1.0 null Prostate adenocarcinoma_PRAD_TCGA-VP-A87H-01A-11R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-RWS6-1926-SM-47JXY GTEx Tissue Sample Gene Expression Profiles 1.0 0.828683 VZ in dorsomedial extrastriate cortex (V2) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.10604 NCI-H1092 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -2.45444 POLR2AphosphoS2_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null maps GeneRIF Biological Term Annotations 1.0 null GTEX-T5JC-0008-SM-4DM6A GTEx Tissue Sample Gene Expression Profiles 1.0 1.2629 GTEX-WL46-0011-R6A-SM-3LK6X GTEx Tissue Sample Gene Expression Profiles -1.0 -0.987503 diabetes GeneRIF Biological Term Annotations 1.0 null CTCF_fibroblast of lung_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K66963616 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.09668 FDXR MSigDB Cancer Gene Co-expression Modules 1.0 null H3K4me3_MEL cell line_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null EFM-192B Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.950967 HUP-T3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.24074 Neoplasms CTD Gene-Disease Associations 1.0 1.22727 SMC3_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_GM19193_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NELFE ENCODE Transcription Factor Targets 1.0 null GTF2F1 ENCODE Transcription Factor Targets 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-G7-6793-01A-11R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null parafascicular nucleus of thalamus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.0437 XBP1_OE_GDS2861_60_human_MCF7 breast cancer cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null anterior (rostral) cingulate (medial prefrontal) cortex_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 2.17667 BRD-K43203897 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.28917 GTEX-R55C-0326-SM-3GAF1 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.16059 H2AFZ_keratinocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BCL3_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HHV8_72Hour-LEC_20080955_GSE16354 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.84449 upper limb region of M1 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.23948 citiolone-3930 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null NCI-H920 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.60972 papaverine-5769 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Brain Lower Grade Glioma_LGG_TCGA-S9-A6WG-01A-11R-A33Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_retinal pigment epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_foreskin fibroblast_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null BRD-K19492738 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.6303 abnormality GeneRIF Biological Term Annotations 1.0 null tail of caudate nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.21186 glucose metabolism disease GWASdb SNP-Disease Associations 1.0 0.338117 MC-IXC GDSC Cell Line Gene Expression Profiles 1.0 1.59329 TAF1_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SPI1-22096565-GC-B-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null RCOR3 ChEA Transcription Factor Targets 1.0 null NB-4 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 MZ in caudal perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.00438 rs13281615 GeneRIF Biological Term Annotations 1.0 null H3K4me3_bone marrow_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null SG in caudal perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.24326 SK-MM-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.38384 BRD-K72707702 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.06583 Skin Cutaneous Melanoma_SKCM_TCGA-FR-A7U8-06A-21R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRD-K53387776 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.08895 FGFR3_KD_GDS4454_78_human_RT112 GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null NFIC ENCODE Transcription Factor Targets 1.0 null ChIP_RCOR3_21632747 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null MYC_K562_hg19_7 ENCODE Transcription Factor Binding Site Profiles 1.0 null neoplasm GWASdb SNP-Phenotype Associations 1.0 0.164876 Neural Tube Defects CTD Gene-Disease Associations 1.0 1.52061 hematological neoplasm GWASdb SNP-Phenotype Associations 1.0 0.300006 BRD-K57830670 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.3385 POLR2AphosphoS5_U-87 MG_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-NPJ7-0011-R11A-SM-2I3E8 GTEx Tissue Sample Gene Expression Profiles -1.0 -2.09492 arthritis GWASdb SNP-Phenotype Associations 1.0 0.326877 H3ac_myocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-U8T8-0008-SM-4DXSP GTEx Tissue Sample Gene Expression Profiles 1.0 1.24303 WRNIP1 ENCODE Transcription Factor Targets 1.0 null Lung adenocarcinoma_LUAD_TCGA-44-6774-01A-21R-1858-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-RTLS-2326-SM-46MUH GTEx Tissue Sample Gene Expression Profiles 1.0 1.39935 EBF1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XUJ4-0004-SM-4BOQE GTEx Tissue Sample Gene Expression Profiles 1.0 1.05324 dapsone-1705 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-OXRK-0826-SM-2HMK7 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.22915 abnormality of upper limb bone GWASdb SNP-Phenotype Associations 1.0 1.25845 urethral stenosis GWASdb SNP-Phenotype Associations 1.0 1.25845 benzonatate-1679 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Lung adenocarcinoma_LUAD_TCGA-64-5779-01A-01R-1628-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_endothelial cell of umbilical vein_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null GTEX-TML8-0926-SM-4DXSJ GTEx Tissue Sample Gene Expression Profiles 1.0 1.4074 kidney disease GWASdb SNP-Disease Associations 1.0 0.234824 anomaly of the upper limb diaphyses GWASdb SNP-Phenotype Associations 1.0 1.25845 H3K27me3_cardiac mesoderm_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_fibroblast of gingiva_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null BRD-K15532741 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.29073 H3K4me3_fibroblast of mammary gland_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null abnormality of the nephron GWASdb SNP-Phenotype Associations 1.0 0.942765 H3K4me3_Brain Anterior Caudate Roadmap Epigenomics Histone Modification Site Profiles 1.0 null H2AFZ_osteoblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null abnormality of the costochondral junction GWASdb SNP-Phenotype Associations 1.0 1.25845 abnormality of the endocrine system GWASdb SNP-Phenotype Associations 1.0 0.166495 BRD-K14098658 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.42352 SB-202190-6882 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null TE8 CCLE Cell Line Gene CNV Profiles 1.0 1.41936 HGC-27 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.39088 CAL51 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.927376 H3K9ac_liver_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null CTCF_GM12873_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null FOSL2 ENCODE Transcription Factor Targets 1.0 null gallbladder disease GWASdb SNP-Disease Associations 1.0 0.436942 BRD-K78262424 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.24858 BRD-K16727544 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.46148 fulvestrant-4462 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null KYSE-510 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.06618 Kidney Chromophobe_KICH_TCGA-KN-8428-01A-11R-2315-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CHD2_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null inner portion of medial ganglionic eminence Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.987083 BCL11A_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CUX1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_fibroblast of upper leg skin_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null RFX5 ENCODE Transcription Factor Targets 1.0 null BRD-K84090286 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.7973 RELA_GM18505_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H446 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.69623 SNU-423 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.21829 Kidney Failure, Chronic dbGAP Gene-Trait Associations 1.0 0.443956 cell part LOCATE Predicted Protein Localization Annotations 1.0 null BCL3-23251550-MUSCLE-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2920-03B-01T-0760-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-ER-A2ND-06A-11R-A18T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BCLAF1 ENCODE Transcription Factor Targets 1.0 null BRD-K97064059 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.13851 abnormality of higher mental function GWASdb SNP-Phenotype Associations 1.0 0.25986 Kidney renal papillary cell carcinoma_KIRP_TCGA-IA-A40Y-01A-11R-A24Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NUDHL1 CCLE Cell Line Gene Expression Profiles 1.0 1.61089 neurological GAD High Level Gene-Disease Associations 1.0 0.295739 BRD-A81407814 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.42143 CTCF_fibroblast of mammary gland_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K90821428 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.59237 dilazep-7364 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null HUP-T3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.915012 Hodgkin Disease dbGAP Gene-Trait Associations 1.0 0.64828 GTEX-UTHO-0011-R2A-SM-3GIKC GTEx Tissue Sample Gene Expression Profiles -1.0 -0.830509 H3K9ac_mammary epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-U3ZH-0002-SM-3NMDD GTEx Tissue Sample Gene Expression Profiles 1.0 1.18249 PSN1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.22848 cotinine-2011 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null BRD-K61248288 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.04931 H3K4me3_MCF-7_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null CA4 field, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.61325 SP1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null IKZF1 ENCODE Transcription Factor Targets 1.0 null H3K4me3_keratinocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-TSE9-2226-SM-4DXUR GTEx Tissue Sample Gene Expression Profiles 1.0 1.28858 CAL-72 COSMIC Cell Line Gene CNV Profiles 1.0 2.04585 TBP_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K57365604 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.53687 gains GeneRIF Biological Term Annotations 1.0 null CTCF_A549_hg19_9 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAZ_IMR-90_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Diabetes Mellitus, Type 2 HuGE Navigator Gene-Phenotype Associations 1.0 null HCT15 BioGPS Cell Line Gene Expression Profiles -1.0 -1.27526 H3K4me3_fibroblast of pedal digit skin_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null female reproductive system disease GWASdb SNP-Disease Associations 1.0 0.212174 clopidol LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.19298 CTCF_HeLa-S3_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K63211622 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.08252 POLR2A_cortical plate_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null cerebellar cortex_1 yrs_F_12830 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -2.57087 striatum_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.13505 SK-OV-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.29369 POLR2A_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WH7G-0002-SM-4LVN9 GTEx Tissue Sample Gene Expression Profiles 1.0 1.09724 H3K4me3_K562_hg19_4 ENCODE Histone Modification Site Profiles 1.0 null GTEX-S4P3-0926-SM-4AD54 GTEx Tissue Sample Gene Expression Profiles 1.0 0.995456 SJSA-1 GDSC Cell Line Gene Expression Profiles -1.0 -1.81587 BRD-K99447506 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -4.39108 AN3 CA Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.832906 H3K9ac_fibroblast of dermis_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null BRD-K71414336 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures 1.0 3.46577 SPI1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRD-K96239538 LINCS L1000 CMAP Chemical Perturbation Consensus Signatures -1.0 -3.32887 HCC2279 CCLE Cell Line Gene Expression Profiles 1.0 1.51631 GTEX-QEG4-0426-SM-33HC3 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.62003 sirolimus-5581 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-WL46-0011-R9A-SM-3MJFP GTEx Tissue Sample Gene Expression Profiles -1.0 -0.919578 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EA-A3Y4-01A-51R-A24H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZMIZ1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null VZ in midcingulate neocortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.05169