association dataset threshold value standardized value CTCF_GM19240_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null AKT1_knockout_210_GSE39699 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -1.93248 H2AFZ_CD14-positive monocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null thyroid_5c HPA Tissue Sample Gene Expression Profiles 1.0 1.14759 HDAC1 ENCODE Transcription Factor Targets 1.0 null tiaprofenic acid-2492 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-T2IS-0426-SM-32QPE GTEx Tissue Sample Gene Expression Profiles -1.0 -1.003 GTEX-TKQ1-1426-SM-4GICK GTEx Tissue Sample Gene Expression Profiles -1.0 -1.07371 CREB1 ENCODE Transcription Factor Targets 1.0 null xylazine-4147 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null llc-rk1 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 1.57209 H3K4me3_BJ_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-PX3G-0926-SM-48U12 GTEx Tissue Sample Gene Expression Profiles 1.0 0.853321 EIF2S3 Pathway Commons Protein-Protein Interactions 1.0 null membrane-bounded organelle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.197993 CTCF_GM12866_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null DGCR8 Pathway Commons Protein-Protein Interactions 1.0 null PANC1005 CCLE Cell Line Gene Expression Profiles 1.0 1.94611 HS 936.T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -2.0247 amygdaloid complex_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.29173 pyrvinium-6339 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-W5WG-0002-SM-3NMDN GTEx Tissue Sample Gene Expression Profiles 1.0 1.7778 H3K4me3_G1E-ER4_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-E1-A7Z2-01A-21R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NUGC-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.64094 tanespimycin-5566 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H513 COSMIC Cell Line Gene Mutation Profiles 1.0 null medial intermediate part of entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.03653 FOXA2_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CPSF6 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-S4Z8-1826-SM-3K2BH GTEx Tissue Sample Gene Expression Profiles -1.0 -1.35921 KP-N-YN GDSC Cell Line Gene Expression Profiles -1.0 -2.20932 NCI-H460 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.938833 meclozine-5607 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null BL2255 (PRKRIR) NURSA Protein Complexes 1.0 null Anterior cingulate area, dorsal part, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.58577 indometacin-2377 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null head of caudate Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.830327 inferolateral temporal cortex (area TEv, area 20)_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.88686 HBL-100 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.14817 SNB19 BioGPS Cell Line Gene Expression Profiles -1.0 -0.911539 H3K9ac_fibroblast of dermis_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null organonitrogen compound biosynthetic process GO Biological Process Annotations 2015 1.0 null E2F6_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null KG-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.83089 skeletal muscle HPA Tissue Gene Expression Profiles -1.0 -2.06102 BHLHE40_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null FOXP2_SK-N-MC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_CH12.LX_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null PAX5_GM12891_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAX_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Superior olivary complex, lateral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.15399 RFX5 ENCODE Transcription Factor Targets 1.0 null LN18 BioGPS Cell Line Gene Expression Profiles -1.0 -1.32672 MAZ_IMR-90_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ventrolateral prefrontal cortex_17 pcw_F_12880 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.904614 KM-12 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.23437 H3K4me3_epithelial cell of esophagus_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null FLNA Pathway Commons Protein-Protein Interactions 1.0 null CTCF_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ZC3HAV1 Pathway Commons Protein-Protein Interactions 1.0 null H3K9me1_endothelial cell of umbilical vein_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null cellular amino acid biosynthetic process GO Biological Process Annotations 2015 1.0 null GTEX-PWN1-0008-SM-48TEA GTEx Tissue Sample Gene Expression Profiles 1.0 0.955204 EVSA-T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.24468 vertebrate muscular system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.060588 hsa-miR-4286 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.965816 GTEX-WXYG-0005-SM-3NB3M GTEx Tissue Sample Gene Expression Profiles -1.0 -1.16724 alitretinoin_homo sapiens_gpl6480_gse43090 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null HGC-27 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.41766 RFX5_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SF3B2 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-U8T8-0005-SM-3DB8F GTEx Tissue Sample Gene Expression Profiles -1.0 -1.31482 17724462-TableS2 GeneSigDB Published Gene Signatures 1.0 null seedling TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.217974 H3K4me2_K562_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GS-A9TQ-01A-11R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null VIIIA, left, lateral hemisphere Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.840085 perhexiline-2410 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null KNS42 CCLE Cell Line Gene CNV Profiles -1.0 -1.59381 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-Q1-A73S-01A-11R-A33Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_osteoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null TAF1_GM12892_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_K562_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2920-03B-01T-0760-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null YWHAE Pathway Commons Protein-Protein Interactions 1.0 null H3K27ac_brown adipose tissue_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null OVMANA CCLE Cell Line Gene Expression Profiles -1.0 -2.11866 biosynthetic process GO Biological Process Annotations 2015 1.0 null PBX3_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Primary hematopoietic stem cells G-CSF-mobilized Male Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles 1.0 0.850597 medial habenular nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.59302 intermediate stratum of r9BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.367 TRMT112 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_kidney_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_heart_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null MAX_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null LNCaP cell ProteomicsDB Cell Type and Tissue Protein Expression Profiles 1.0 1.50139 MAX_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TP53BP1 Pathway Commons Protein-Protein Interactions 1.0 null Prostate adenocarcinoma_PRAD_TCGA-G9-6496-01A-11R-1789-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-NFK9-0006-SM-3GACS GTEx Tissue Sample Gene Expression Profiles -1.0 -0.95845 GTEX-V1D1-2426-SM-3GAER GTEx Tissue Sample Gene Expression Profiles -1.0 -0.940307 HDAC2_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null tretinoin_homo sapiens_gpl6244_gds4180 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H2AFZ_fibroblast of lung_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H2AFZ_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K79me2_H1-hESC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null CTCF_HepG2_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null DDX17 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-O5YV-2026-SM-2D7VS GTEx Tissue Sample Gene Expression Profiles -1.0 -1.0554 Prostate adenocarcinoma_PRAD_TCGA-HC-A6AO-01A-11R-A30B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-QVUS-2826-SM-3GADB GTEx Tissue Sample Gene Expression Profiles 1.0 1.03554 valproic acid-2674 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null pyrantel-5513 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null SUPM2 CCLE Cell Line Gene Expression Profiles -1.0 -1.64337 YY1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null female reproductive gland TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.284607 RPL24 Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_K562_hg19_9 ENCODE Transcription Factor Binding Site Profiles 1.0 null rostral group of intralaminar nuclei, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.33124 EKLF-21900194-ERYTHROCYTE-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null H3K9ac_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null trichostatin A-2137 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null r6 part of dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.41244 H3K27ac_limb_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null 5252917-828 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null DDX54 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_testis_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null TBP_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-X5EB-2326-SM-46MW5 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.60061 CHD2_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Anterior olfactory nucleus, lateral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.33976 skeletalmuscle_b HPA Tissue Sample Gene Expression Profiles -1.0 -1.0487 GTEX-S7SE-0326-SM-4AT5Q GTEx Tissue Sample Gene Expression Profiles 1.0 1.20774 HMEC Roadmap Epigenomics Cell and Tissue Gene Expression Profiles 1.0 0.884048 Hep-G2 cell ProteomicsDB Cell Type and Tissue Protein Expression Profiles -1.0 -1.56912 BABAM1 Pathway Commons Protein-Protein Interactions 1.0 null MAZ_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null cellular metabolic process GO Biological Process Annotations 2015 1.0 null GTEX-P4QS-2126-SM-3NMCF GTEx Tissue Sample Gene Expression Profiles 1.0 0.885069 external granular (germinal) layer of lower rhombic lip Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.94291 H3K4me3_fibroblast of foreskin _hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H3K9ac_mammary epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Prostate adenocarcinoma_PRAD_TCGA-KK-A8IK-01A-11R-A36G-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SNU-423 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.874739 GTEX-S7SF-2026-SM-3K2AS GTEx Tissue Sample Gene Expression Profiles -1.0 -1.14545 SP2 ENCODE Transcription Factor Targets 1.0 null PRPF19 Pathway Commons Protein-Protein Interactions 1.0 null PRPF6 Pathway Commons Protein-Protein Interactions 1.0 null NCI-H2110 COSMIC Cell Line Gene CNV Profiles 1.0 2.41451 thyroid gland TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null WRNIP1 ENCODE Transcription Factor Targets 1.0 null H3K4me1_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null OVCA 432 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.89796 head TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null BC-1 GDSC Cell Line Gene Expression Profiles 1.0 2.32161 GTEX-TSE9-0011-R4A-SM-3DB7H GTEx Tissue Sample Gene Expression Profiles 1.0 1.08702 KE37 CCLE Cell Line Gene Expression Profiles -1.0 -1.53199 YWHAZ Pathway Commons Protein-Protein Interactions 1.0 null SAP30 ENCODE Transcription Factor Targets 1.0 null GTEX-Q2AH-0726-SM-2I3EA GTEx Tissue Sample Gene Expression Profiles 1.0 1.02292 pancreas BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 1.00995 H3K4me3_choroid plexus epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null RPL7A Pathway Commons Protein-Protein Interactions 1.0 null CP in caudal subicular cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.70243 H3K4me3_GM12878_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null H3K4me1_heart_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null AR_01_323 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.60219 OPM2 CCLE Cell Line Gene CNV Profiles -1.0 -1.66581 gelsemine-2162 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me3_GM12864_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-37-4132-01A-01R-1100-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung adenocarcinoma_LUAD_TCGA-49-4512-01A-21R-1858-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null AOB, internal plexiform layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.58863 EZH2_mammary epithelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_medulloblastoma_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null lower (caudal) rhombic lip Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.17135 GTEX-T5JC-1826-SM-4DM6E GTEx Tissue Sample Gene Expression Profiles -1.0 -0.826936 ARID3A_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2AphosphoS5_U-87 MG_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EZH2_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Infralimbic area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.22027 psychotic disorder DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.163523 GTEX-RUSQ-0526-SM-2TF72 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.955113 CAPRIN1 Pathway Commons Protein-Protein Interactions 1.0 null salivary gland TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.393819 fendiline-7188 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null 4-Hydroxyproline HMDB Metabolites of Enzymes 1.0 null H3K4me1_embryonic fibroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null MAX_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-QVUS-0006-SM-3GAE8 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.4403 Lung squamous cell carcinoma_LUSC_TCGA-56-8304-01A-11R-2326-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K27ac_MEL cell line_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null POLR2AphosphoS5_HCT116_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-R55F-0005-SM-2TF4W GTEx Tissue Sample Gene Expression Profiles -1.0 -2.07225 POLR2A_GM12878_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Frontal pole, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.04359 anterior (rostral) cingulate (medial prefrontal) cortex_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.965505 GTEX-S7SE-0011-R1A-SM-2XCDE GTEx Tissue Sample Gene Expression Profiles 1.0 1.22283 CCNT2 ENCODE Transcription Factor Targets 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-T2-A6X2-01A-12R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HDAC2_H1-hESC_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XUYS-0326-SM-47JX2 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.196 H3K4me3_cardiac fibroblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null MXI1_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Flocculus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.49017 central gray of the pons, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.88494 H3K4me2_osteoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Perturb_2273_KO_Mettl3_SRP110576 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 16.1159 enzalutamide_homo sapiens_gpl570_gse44905 GEO Signatures of Differentially Expressed Genes for Small Molecules -1.0 null RSV_48Hour_22398282_GSE32138 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.68081 NCI-H1623 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.997937 Prostate adenocarcinoma_PRAD_TCGA-QU-A6IN-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HPAF-II GDSC Cell Line Gene Expression Profiles 1.0 1.45906 SRPRB Pathway Commons Protein-Protein Interactions 1.0 null RPL8 Pathway Commons Protein-Protein Interactions 1.0 null EGR1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CAL-120 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.33327 GTEX-QDVN-2226-SM-2S1PM GTEx Tissue Sample Gene Expression Profiles 1.0 1.00669 Head and Neck squamous cell carcinoma_HNSC_TCGA-TN-A7HI-01A-11R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-WL46-3026-SM-3LK7Z GTEx Tissue Sample Gene Expression Profiles 1.0 1.76089 Koelliker-Fuse subnucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.01532 MTFMT Pathway Commons Protein-Protein Interactions 1.0 null Drug-Related Side Effects and Adverse Reactions CTD Gene-Disease Associations 1.0 1.19868 RPS24 Pathway Commons Protein-Protein Interactions 1.0 null CTCF_GM12875_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WHWD-0005-SM-3LK7D GTEx Tissue Sample Gene Expression Profiles -1.0 -1.14077 GTEX-T5JW-0426-SM-4DM7M GTEx Tissue Sample Gene Expression Profiles 1.0 0.852988 RCOR1_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null IZ in superolateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.937095 hsa-miR-4722-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.2992 H3K4me2_myotube_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null RELA ENCODE Transcription Factor Targets 1.0 null TRPS1_Mutation_GDS4493_594_mouse_Whisker pads GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null XRN2-22483619-HELA-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null SNRPA1 Pathway Commons Protein-Protein Interactions 1.0 null POLR2AphosphoS5_neural cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null r2 part of anteroventral cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.41473 acetylsalicylic acid-5201 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Prestwick-860-5679 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null RPN1 Pathway Commons Protein-Protein Interactions 1.0 null CHD1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MEL-HO Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.984764 primary auditory cortex (core)_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.26367 H4K20me1_HeLa-S3_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-RN64-2326-SM-48FDW GTEx Tissue Sample Gene Expression Profiles 1.0 1.74828 CREB1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HS936T CCLE Cell Line Gene Expression Profiles -1.0 -2.16798 POLR2A_small intestine_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H2AK5ac_IMR90 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null hsa-miR-3929 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.20993 PANC-08-13 COSMIC Cell Line Gene CNV Profiles 1.0 2.41451 r1 part of intermediate nucleus of the lateral lemniscus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.48915 ZNF263_HEK293_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_brain_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Liver BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 1.10236 SIN3A_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_GM18951_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCT 116 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.946072 NCIH660 CCLE Cell Line Gene CNV Profiles 1.0 1.4288 GTEX-OHPL-0326-SM-33HC8 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.96211 hippocampus (hippocampal formation)_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.13057 GTEX-XYKS-1726-SM-4E3IO GTEx Tissue Sample Gene Expression Profiles 1.0 1.09107 Lung adenocarcinoma_LUAD_TCGA-95-8494-01A-11R-2326-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null prenylamine-5489 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null MKN-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.877877 Bladder Urothelial Carcinoma_BLCA_TCGA-CF-A5UA-01A-11R-A28M-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null KCTD12 Pathway Commons Protein-Protein Interactions 1.0 null embryoday10.5 BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 1.60156 USF2_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CL14 CCLE Cell Line Gene CNV Profiles -1.0 -1.50479 hecogenin-5818 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null CTCF_BJ_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2AphosphoS5_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-RNOR-0526-SM-2TF4O GTEx Tissue Sample Gene Expression Profiles -1.0 -1.62494 Accessory olfactory bulb, mitral layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.53881 H3K79me2_fibroblast of dermis_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K9ac_MEL cell line_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null ZNF384_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SNU-484 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.22199 GTEX-OIZH-0005-SM-2HMJN GTEx Tissue Sample Gene Expression Profiles -1.0 -2.88937 Bladder Urothelial Carcinoma_BLCA_TCGA-DK-A3IK-01A-32R-A21D-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CHAGO-K-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.975581 PLOD3 Pathway Commons Protein-Protein Interactions 1.0 null CTCF_MCF-7_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null TCF3 ENCODE Transcription Factor Targets 1.0 null GTEX-Q2AI-0526-SM-2I3EJ GTEx Tissue Sample Gene Expression Profiles 1.0 1.89003 ventrolateral prefrontal cortex_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.42619 POLR2A_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null brain_a HPA Tissue Sample Gene Expression Profiles 1.0 1.08641 E2F4_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BL4782 (AKT1S1) NURSA Protein Complexes 1.0 null ChIP_POU5F1_16518401 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null integumentary system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.273664 YWHAH Pathway Commons Protein-Protein Interactions 1.0 null BT483 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 1.04096 NFATC1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null EBC1 CCLE Cell Line Gene Expression Profiles 1.0 1.36814 POLR2A_K562_hg19_6 ENCODE Transcription Factor Binding Site Profiles 1.0 null YY1_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null posteroventral (inferior) parietal cortex_23 yrs_M_12300 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.904821 Sarcoma_SARC_TCGA-DX-A8BH-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_GM12865_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H3K9ac_CH12.LX_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null ILF3 Pathway Commons Protein-Protein Interactions 1.0 null SUMO2 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-QMRM-0526-SM-2I5GA GTEx Tissue Sample Gene Expression Profiles -1.0 -0.847672 ELK1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null prasterone-6474 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null medial vestibular nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.6573 SNU-216 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.05615 emboliform nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.38783 cellular_component COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.29623 NUDT21 Pathway Commons Protein-Protein Interactions 1.0 null CTCF_Caco-2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EIF4H Pathway Commons Protein-Protein Interactions 1.0 null GTEX-XLM4-0011-R10A-SM-4AT5P GTEx Tissue Sample Gene Expression Profiles 1.0 0.920413 primary auditory cortex (core)_19 pcw_F_12885 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.90323 CTCF_kidney epithelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_3794_KO_Rnf20_ERP123195 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -7.30144 EP300_GM12878_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null TCF12 ENCODE Transcription Factor Targets 1.0 null glutamine family amino acid metabolic process GO Biological Process Annotations 2015 1.0 null l-proline biosynthetic process GO Biological Process Annotations 2015 1.0 null POLR2AphosphoS5_SK-N-SH_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BJAB Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.09105 ULK2 Pathway Commons Protein-Protein Interactions 1.0 null isotretinoin-7438 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-WOFM-0005-SM-3MJF3 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.855924 bacteroid TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.803544 HDAC2_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null primary auditory cortex (core)_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.35242 H3K4me3_keratinocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-49-4486-01A-01R-1206-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null rimexolone-5517 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null dextromethorphan-2636 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null MG63 CCLE Cell Line Gene CNV Profiles 1.0 1.73762 Prostate adenocarcinoma_PRAD_TCGA-CH-5761-01A-11R-1580-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-OHPL-2026-SM-3TW8R GTEx Tissue Sample Gene Expression Profiles 1.0 1.20305 Primary hematopoietic stem cells G-CSF-mobilized Female RO_01480 Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles 1.0 1.64947 H3K4me3_G1E-ER4_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null fulvestrant_homo sapiens_gpl570_gse22533 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-OIZG-0008-SM-4E3J2 GTEx Tissue Sample Gene Expression Profiles 1.0 1.10552 MYC_K562_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null CHD1 ENCODE Transcription Factor Targets 1.0 null dorsolateral prefrontal cortex_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.02476 FBL Pathway Commons Protein-Protein Interactions 1.0 null ATF2 ENCODE Transcription Factor Targets 1.0 null HCC33 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.846434 superficial stratum of SeStr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.02577 TBP_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SP2_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null hippocampus (hippocampal formation)_17 pcw_F_12880 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.922164 nucleus of the central acoustic tract Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.35821 ascidian TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.617393 hmc1 HPA Cell Line Gene Expression Profiles -1.0 -1.15336 TAF1_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_7728_KO_MED12_SRP201365 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -3.87434 GTEX-T2IS-0011-R3A-SM-32QPB GTEx Tissue Sample Gene Expression Profiles 1.0 1.14035 thigh muscle TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.160195 RPL7 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-XUW1-0008-SM-4BOQH GTEx Tissue Sample Gene Expression Profiles 1.0 0.936603 EXOSC6 Pathway Commons Protein-Protein Interactions 1.0 null SUZ12_DEPLETION_GDS2445_119_human_embryonic fibroblasts GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null GTEX-P4QT-2626-SM-2I3FM GTEx Tissue Sample Gene Expression Profiles 1.0 0.825659 Brain Lower Grade Glioma_LGG_TCGA-HT-7477-01B-11R-A28M-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null EFM-192B Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 2.51599 oxetacaine-4829 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H3K4me3_MEL cell line_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null JURLMK1 CCLE Cell Line Gene CNV Profiles 1.0 1.39588 H3K27ac_HeLa-S3_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H2AFZ_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null frontal pole, left, medial aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.18361 POLR2A_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null (+/-)-catechin-4837 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null POLR2A_endothelial cell of umbilical vein_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAX_C2C12_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null scopolamine-4803 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null TAF1_GM12891_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2AphosphoS5_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Urea cycle and metabolism of amino groups(Homo sapiens) WikiPathways Pathways 2014 1.0 null normoblast TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.177033 CDC37 Pathway Commons Protein-Protein Interactions 1.0 null THBS1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-WFG8-0006-SM-3GIKS GTEx Tissue Sample Gene Expression Profiles -1.0 -1.37676 NOP14 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-WHSB-2026-SM-3LK6H GTEx Tissue Sample Gene Expression Profiles 1.0 1.12193 POLR2A_HGPS cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27ac_GM12878_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null primary auditory cortex (core)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.946273 primary visual cortex (striate cortex, area V1/17)_37 yrs_M_12303 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.832721 superficial stratum of OB Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.32661 Principal sensory nucleus of the trigeminal Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.13424 HNRNPR Pathway Commons Protein-Protein Interactions 1.0 null CTCF_astrocyte of the cerebellum_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SKP1 Pathway Commons Protein-Protein Interactions 1.0 null fastigial nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -2.08622 HCC38 CCLE Cell Line Gene CNV Profiles -1.0 -1.5512 MAPK14_KO_GDS2693_535_mouse_liver GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null CREB1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-OHPK-1726-SM-48TC4 GTEx Tissue Sample Gene Expression Profiles 1.0 0.850426 EIF3L Pathway Commons Protein-Protein Interactions 1.0 null CTCF_retinal pigment epithelial cell_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null IRF4 ENCODE Transcription Factor Targets 1.0 null H3K4me1_K562_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null RBX1 Pathway Commons Protein-Protein Interactions 1.0 null Sarcoma_SARC_TCGA-DX-A1KZ-01A-11R-A24X-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MYBL2 ENCODE Transcription Factor Targets 1.0 null NCI-H28 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.874739 USF2 ENCODE Transcription Factor Targets 1.0 null Brain Lower Grade Glioma_LGG_TCGA-P5-A5F4-01A-11R-A28M-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MCF7 BioGPS Cell Line Gene Expression Profiles 1.0 1.03582 CTCF_ES-Bruce4_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SET-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.41479 GTEX-V955-0726-SM-3GAFG GTEx Tissue Sample Gene Expression Profiles -1.0 -1.63627 Lung squamous cell carcinoma_LUSC_TCGA-85-8276-01A-11R-2296-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null EGR1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SUM 1315M02 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.07142 Crus 2, molecular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.07637 superficial stratum of AOD Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.71362 TBL1XR1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTF2F1 ENCODE Transcription Factor Targets 1.0 null HNRNPK Pathway Commons Protein-Protein Interactions 1.0 null HCC-15 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.00113 GTEX-T5JC-0005-SM-4DM7B GTEx Tissue Sample Gene Expression Profiles -1.0 -1.33366 SK-N-FI Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.980866 GTEX-QDT8-2926-SM-32PKC GTEx Tissue Sample Gene Expression Profiles 1.0 1.2603 H3K9ac_fibroblast of lung_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XUJ4-0004-SM-4BOQE GTEx Tissue Sample Gene Expression Profiles 1.0 1.30843 thioridazine-1905 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-OHPK-2626-SM-2HMK9 GTEx Tissue Sample Gene Expression Profiles 1.0 0.960832 thioridazine-1655 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null MYC_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Sarcoma_SARC_TCGA-DX-A8BP-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K27ac_bone marrow_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null CTCF_GM12871_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_lung_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null organic acid biosynthetic process GO Biological Process Annotations 2015 1.0 null GTEX-PW2O-1726-SM-2S1OO GTEx Tissue Sample Gene Expression Profiles -1.0 -1.10697 benzthiazide-4952 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5466-01A-01R-1503-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null mediodorsal nucleus of thalamus_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.950321 Lung squamous cell carcinoma_LUSC_TCGA-63-7023-01A-11R-1949-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ondansetron-6153 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-WWYW-1326-SM-3NB2S GTEx Tissue Sample Gene Expression Profiles -1.0 -1.08019 NUDT16L1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-QLQW-1326-SM-2S1QS GTEx Tissue Sample Gene Expression Profiles -1.0 -1.37525 MTA3_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SIN3A_PFSK-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null PML_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null antimycin A-2261 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null SIN3A_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_fibroblast of pedal digit skin_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-YC-A89H-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null trifluridine-3559 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null YY1 ENCODE Transcription Factor Targets 1.0 null cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.256299 FOXA1_T47D_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null 0198306-0000-7099 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null MAX_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null chlortetracycline-1958 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me3_BJ_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H3K27ac_mammary epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-P44H-0011-R1A-SM-3NM8J GTEx Tissue Sample Gene Expression Profiles 1.0 2.02033 verapamil-1927 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null RPS28 Pathway Commons Protein-Protein Interactions 1.0 null quinidine-6267 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null diprophylline-5482 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H3K4me1_CH12.LX_mm9_4 ENCODE Histone Modification Site Profiles 1.0 null germ cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.1672 IRF1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null temporal neocortex_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.24518 GTEX-WZTO-2926-SM-3NM9I GTEx Tissue Sample Gene Expression Profiles 1.0 0.939242 r2 part of principal trigeminal sensory nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.30722 THP-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.846548 streptozocin-2535 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-WY7C-2426-SM-3NB2V GTEx Tissue Sample Gene Expression Profiles 1.0 0.951628 BHLHE40_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-56-7579-01A-11R-2045-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_epithelial cell of esophagus_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_HEK293_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAFK_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_fibroblast of the aortic adventitia_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null hsa-miR-4726-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.20993 NCIH1975 CCLE Cell Line Gene CNV Profiles -1.0 -1.411 loperamide-5267 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null thioridazine-4164 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Perturb_10690_KD_circPRKAA3_SRP372818 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 ZNF143_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null estradiol-5955 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null AN3-CA COSMIC Cell Line Gene Mutation Profiles 1.0 null YY1_GM12892_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-DA-A1I0-06A-11R-A20F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCI-H2073 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.01623 UBTF ENCODE Transcription Factor Targets 1.0 null GTEX-RVPU-0011-R3A-SM-2XCAE GTEx Tissue Sample Gene Expression Profiles 1.0 1.04437 GTEX-TKQ2-0826-SM-33HB6 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.40409 Prostate adenocarcinoma_PRAD_TCGA-QU-A6IO-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hsa-miR-4640-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 0.965816 POLR2A_spleen_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HNRNPU Pathway Commons Protein-Protein Interactions 1.0 null HT29 BioGPS Cell Line Gene Expression Profiles -1.0 -0.838146 DMS 273 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.10551 CTCF_cardiac muscle cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ME2 Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_GM12891_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Abnormalities, Multiple CTD Gene-Disease Associations 1.0 1.01966 GTEX-PVOW-0426-SM-2XCF8 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.13596 ELK4_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SMC3_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null XRCC6 Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CMK115 CCLE Cell Line Gene Expression Profiles -1.0 -2.23252 Frontal pole, cerebral cortex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.03998 r4 part of dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.18743 GTEX-QDVN-0626-SM-2I3FP GTEx Tissue Sample Gene Expression Profiles 1.0 0.967216 hematopoietic cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.05198 POU2F2_GM12891_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCC2688 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.10476 H3K4me1_Panc1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4707-01A-01R-1277-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null chloropyramine-4414 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H3K4me3_Jurkat_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null BRCA1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SP1_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GRB2 Pathway Commons Protein-Protein Interactions 1.0 null metolazone-1932 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null midbrain reticular formation Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.996951 GTEX-T5JW-1226-SM-3GACY GTEx Tissue Sample Gene Expression Profiles 1.0 0.983676 CTCF_GM10266_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ventrolateral preoptic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.77695 HCC44 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.08137 NCI-H510A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.11334 GTEX-U8T8-2326-SM-3DB96 GTEx Tissue Sample Gene Expression Profiles 1.0 0.976595 GTEX-N7MT-1026-SM-3TW8T GTEx Tissue Sample Gene Expression Profiles 1.0 1.16435 pergolide-7434 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null TM31 CCLE Cell Line Gene CNV Profiles -1.0 -1.39376 HCC461 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.10551 primary visual cortex (striate cortex, area V1/17)_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.858991 ventrolateral periolivary nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.33982 Brain Lower Grade Glioma_LGG_TCGA-DH-A669-02A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HSF1_01_178 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.58917 SP4_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-DD-A39X-01A-11R-A213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null plant form TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.055263 GTEX-XUZC-1626-SM-4BRVP GTEx Tissue Sample Gene Expression Profiles 1.0 1.32919 hippocampus (hippocampal formation)_19 yrs_F_12832 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.52893 estradiol_homo sapiens_gpl571_gds4063 GEO Signatures of Differentially Expressed Genes for Small Molecules -1.0 null TRIM28 Pathway Commons Protein-Protein Interactions 1.0 null MCM3 Pathway Commons Protein-Protein Interactions 1.0 null Supraoptic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.26185 temporal neocortex_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -2.31562 MV411 CCLE Cell Line Gene Expression Profiles 1.0 1.39133 17952126-SuppTable2 GeneSigDB Published Gene Signatures 1.0 null CTCF_mammary epithelial cell_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WK11-0926-SM-3NMAU GTEx Tissue Sample Gene Expression Profiles 1.0 1.54282 GTEX-VUSH-0004-SM-3P61T GTEx Tissue Sample Gene Expression Profiles 1.0 1.98073 (-)-MK-801-5003 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null MAX_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null tanespimycin-1226 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null MDAMB415 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -1.07119 interstitial nucleus of Cajal, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.50079 SHSYSY-RA BioGPS Cell Line Gene Expression Profiles -1.0 -0.914906 atracurium besilate-1824 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Edema CTD Gene-Disease Associations 1.0 1.22884 OBSL1 Pathway Commons Protein-Protein Interactions 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-G7-6795-01A-11R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-WWYW-0526-SM-3NB2W GTEx Tissue Sample Gene Expression Profiles -1.0 -2.11586 uveal disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.32009 primary auditory cortex (core)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.02258 H3K4me2_fibroblast of lung_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null oxidoreductase activity, acting on the ch-nh group of donors GO Molecular Function Annotations 2015 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-AK-3427-01A-01R-0864-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null anterior (rostral) cingulate (medial prefrontal) cortex_16 pcw_M_12287 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.22561 JUN_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CEBPD_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null DDX6 Pathway Commons Protein-Protein Interactions 1.0 null RBBP5 ENCODE Transcription Factor Targets 1.0 null H3K4me3_epithelial cell of esophagus_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null E2F4_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null HDAC2_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null animal TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.690859 POLR1A Pathway Commons Protein-Protein Interactions 1.0 null iopamidol-7189 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-SNMC-0126-SM-2XCFO GTEx Tissue Sample Gene Expression Profiles -1.0 -0.90952 POLR2A_GM18526_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SUZ12 ENCODE Transcription Factor Targets 1.0 null GTEX-RVPU-0011-R10A-SM-2XCAH GTEx Tissue Sample Gene Expression Profiles 1.0 1.0573 hsa-miR-3614-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.13535 zoxazolamine-6290 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null CHL-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.89836 hsa-miR-4508 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.13535 H3K4me3_NT2-D1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null midbrain reticular formation, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.842874 SIN3A_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null telenzepine-2388 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null LTBR_INHIBITION - 27 Day_GDS2004_736_mouse_Lymph nodes (MG-430A) GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null CCT4 Pathway Commons Protein-Protein Interactions 1.0 null mediodorsal nucleus of thalamus_16 pcw_M_12287 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.31841 inner SZ in primary visual cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.03624 EFM-192C Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 2.7521 fenofibrate-2401 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null dorsolateral prefrontal cortex_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.13132 GATA2_G1E-ER4_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-RU1J-1726-SM-2TF5S GTEx Tissue Sample Gene Expression Profiles -1.0 -1.74783 GTEX-Q2AG-1026-SM-33HBW GTEx Tissue Sample Gene Expression Profiles -1.0 -1.01044 DARS Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_ES-Bruce4_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null STAT3 ENCODE Transcription Factor Targets 1.0 null JEG-3 GDSC Cell Line Gene Expression Profiles -1.0 -1.737 G3BP2 Pathway Commons Protein-Protein Interactions 1.0 null SIN3A_MCF-7_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null YY1_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCC1395 CCLE Cell Line Gene CNV Profiles 1.0 1.4366 proline biosynthetic process GO Biological Process Annotations 2015 1.0 null tacrine-5297 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null organonitrogen compound metabolic process GO Biological Process Annotations 2015 1.0 null hsa-miR-371-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.13535 skeletal muscle TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.066841 dilazep-4688 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null hippocampus (hippocampal formation)_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.976749 kidney TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.068841 CTCF_heart_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-66-2782-01A-01R-0851-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-S7PM-0006-SM-3NM8C GTEx Tissue Sample Gene Expression Profiles -1.0 -0.920725 Perturb_12523_KD_Linc00673_SRP212104 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 GlobusPallidus BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -0.90686 GTEX-P44H-0006-SM-2XCFB GTEx Tissue Sample Gene Expression Profiles -1.0 -2.57312 Brain Lower Grade Glioma_LGG_TCGA-DU-6408-01A-11R-1708-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-QEG4-0626-SM-2S1OY GTEx Tissue Sample Gene Expression Profiles -1.0 -1.1326 salivarygland_6b HPA Tissue Sample Gene Expression Profiles 1.0 0.851026 disopyramide-2408 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null superficial stratum of r2Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.30538 SW 480 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.874739 NCI-H322T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.969588 hsa-miR-4716-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.07142 POLR2A_Raji_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-QEG5-1426-SM-447AS GTEx Tissue Sample Gene Expression Profiles 1.0 0.957723 POLR2A_HCT116_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null trifluoperazine-5221 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null TOX4 Pathway Commons Protein-Protein Interactions 1.0 null H3K79me2_GM12878_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null MAX_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null oocyte TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.426185 SLC25A3 Pathway Commons Protein-Protein Interactions 1.0 null EEF1D Pathway Commons Protein-Protein Interactions 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-D3-A2JN-06A-11R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null flufenamic acid-316 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null CTCF_GM12874_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_NB4_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Main olfactory bulb, outer plexiform layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.14787 CTCF_G1E-ER4_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null dorsolateral prefrontal cortex_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.90512 H3K4me3_GM12875_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_fibroblast of mammary gland_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null REST_neural cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null lobeline-2763 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-RU72-1426-SM-46MUF GTEx Tissue Sample Gene Expression Profiles 1.0 0.87481 interpositus (intermediate) nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -2.49012 CTCF_skeletal muscle myoblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_7724_KO_MED12_SRP201365 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -4.19111 RPS17 Pathway Commons Protein-Protein Interactions 1.0 null CP in retrosplenial cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.844206 GTEX-X4EP-0005-SM-3P5ZE GTEx Tissue Sample Gene Expression Profiles -1.0 -1.60311 NCI-H2122 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.938117 mantle zone of r5BL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.07978 NFYA_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null YWHAG Pathway Commons Protein-Protein Interactions 1.0 null SNRPD2 Pathway Commons Protein-Protein Interactions 1.0 null cerebellum_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.1168 rectum_8b HPA Tissue Sample Gene Expression Profiles -1.0 -0.950553 Prostate adenocarcinoma_PRAD_TCGA-M7-A724-01A-12R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_foreskin fibroblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K27ac_CH12.LX_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null MCF 10A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.846548 kidney cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.095242 CTCF_fibroblast of the aortic adventitia_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-VUSG-0726-SM-3GIK1 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.13766 GTEX-QLQW-0005-SM-2S1RA GTEx Tissue Sample Gene Expression Profiles -1.0 -0.858155 GTEX-WVLH-3126-SM-3MJGA GTEx Tissue Sample Gene Expression Profiles 1.0 1.23111 PPP1CA Pathway Commons Protein-Protein Interactions 1.0 null GTEX-SE5C-0006-SM-4BRW5 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.24835 Y-27632-948 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H3K4me3_K562_hg19_4 ENCODE Histone Modification Site Profiles 1.0 null CTCF_thymus_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null felodipine-965 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null cell part LOCATE Predicted Protein Localization Annotations 1.0 null H3K4me3_CH12.LX_mm9_4 ENCODE Histone Modification Site Profiles 1.0 null KURAMOCHI Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.31406 NELFE_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null kanamycin-3224 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2823-03A-01T-0736-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null mepyramine-3184 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null RAD21 ENCODE Transcription Factor Targets 1.0 null H3K9ac_endothelial cell of umbilical vein_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_G1E_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null COV318 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.90478 AKAP1 Pathway Commons Protein-Protein Interactions 1.0 null Thyroid BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 0.914794 CTCF_B cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-PWCY-0005-SM-33HBP GTEx Tissue Sample Gene Expression Profiles -1.0 -1.32835 H3K4me3_choroid plexus epithelial cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null HIST1H1A Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_WI38_hg19_4 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_fibroblast of pedal digit skin_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_fibroblast of dermis_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null BCL11A_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Anterior olfactory nucleus, external part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.62812 ethotoin-3892 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null BV173 CCLE Cell Line Gene CNV Profiles 1.0 2.15881 SP1 ENCODE Transcription Factor Targets 1.0 null Lung adenocarcinoma_LUAD_TCGA-78-7153-01A-11R-2039-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null 16872506-SuppTable1 GeneSigDB Published Gene Signatures 1.0 null H3K4me1_fibroblast of dermis_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-T5JC-0226-SM-32PMA GTEx Tissue Sample Gene Expression Profiles -1.0 -1.208 SG in temporal polar cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.34492 Peripheral_Blood_Mononuclear_Primary_Cells Roadmap Epigenomics Cell and Tissue Gene Expression Profiles -1.0 -1.27107 thyroid BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 0.852417 GTEX-XQ8I-0006-SM-4BOQ5 GTEx Tissue Sample Gene Expression Profiles -1.0 -3.05025 SMG5 Pathway Commons Protein-Protein Interactions 1.0 null HSPA9 Pathway Commons Protein-Protein Interactions 1.0 null H3K9ac_Adipose Derived Mesenchymal Stem Cell Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null quinidine-3191 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null KP4 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.38138 RCOR1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null JEKO-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.71565 SLIRP Pathway Commons Protein-Protein Interactions 1.0 null hsa-miR-5095 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.55165 POLR2A_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ventromedial preoptic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.45347 YY1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null diflorasone-2142 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null VIIIB, left, lateral hemisphere Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.00576 H3K79me2_fibroblast of lung_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null IL15_UP.V1 MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations 1.0 null Perturb_17611_OE_U2AF35_SRP116787 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -3.66814 superficial stratum of r11Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.34554 POLR2A ENCODE Transcription Factor Targets 1.0 null mantle zone of r7Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.13424 hsa-miR-4267 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.965816 GTEX-PVOW-2726-SM-48TCA GTEx Tissue Sample Gene Expression Profiles 1.0 2.4934 ioxaglic acid-3528 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-QCQG-1326-SM-48U24 GTEx Tissue Sample Gene Expression Profiles 1.0 1.03023 Intermediodorsal nucleus of the thalamus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.0997 H3K4me3_LNCaP clone FGC_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GRWD1 Pathway Commons Protein-Protein Interactions 1.0 null inferolateral temporal cortex (area TEv, area 20)_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.970301 M059K CCLE Cell Line Gene CNV Profiles -1.0 -1.33181 HSPA8 Pathway Commons Protein-Protein Interactions 1.0 null mefenamic acid-1699 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null MRPS18B Pathway Commons Protein-Protein Interactions 1.0 null MCM5 Pathway Commons Protein-Protein Interactions 1.0 null GTF2I Pathway Commons Protein-Protein Interactions 1.0 null HCC1599 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.766632 intermediate stratum of r5BI Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.45974 NFIC_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H920 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.6921 Rectum adenocarcinoma_READ_TCGA-EI-6885-01A-11R-1928-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null apomorphine-5283 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Anemia, Hemolytic CTD Gene-Disease Associations 1.0 1.02485 inner CP in temporal polar cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.2409 POLR2A_GM12892_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XMD1-0006-SM-4AT4Q GTEx Tissue Sample Gene Expression Profiles -1.0 -1.51743 AOB, glomerular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.9882 occipital neocortex_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.894819 PRKAB1 Pathway Commons Protein-Protein Interactions 1.0 null trunk TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.061398 POLR2A_liver_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_9834_KO_miR31_SRP354225 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 Orbital area, medial part, layer 5 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.7436 ambroxol-5319 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null arginine and proline metabolism KEGG Pathways 1.0 null skin_5f HPA Tissue Sample Gene Expression Profiles -1.0 -1.0075 tissues, cell types and enzyme sources TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null YY1_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-P4PP-0005-SM-2HMKX GTEx Tissue Sample Gene Expression Profiles -1.0 -1.60466 GTEX-VUSG-1526-SM-4KKZH GTEx Tissue Sample Gene Expression Profiles 1.0 1.06221 gastrointestinal tract TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.061388 H3K79me2_mammary epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null NY GDSC Cell Line Gene Expression Profiles 1.0 1.85127 ventricular (matrix) zone of cerebellum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.21619 MYOD1 ENCODE Transcription Factor Targets 1.0 null MRPS7 Pathway Commons Protein-Protein Interactions 1.0 null H3K18ac_H9 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null MAX_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RUNX3_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.201962 CTCF_GM12864_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null DAP3 Pathway Commons Protein-Protein Interactions 1.0 null IRF3 ENCODE Transcription Factor Targets 1.0 null GTEX-S32W-1926-SM-4AD63 GTEx Tissue Sample Gene Expression Profiles 1.0 1.1585 E2F6_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null nitrogen compound metabolic process GO Biological Process Annotations 2015 1.0 null PSMB3 Pathway Commons Protein-Protein Interactions 1.0 null MTDH Pathway Commons Protein-Protein Interactions 1.0 null Perturb_2272_KO_Mettl3_SRP110576 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 10.6243 GTEX-SNMC-0006-SM-2XCFE GTEx Tissue Sample Gene Expression Profiles -1.0 -0.922702 CDKN2B Pathway Commons Protein-Protein Interactions 1.0 null TBP_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null whole body TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null sense organ TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.055592 PML ENCODE Transcription Factor Targets 1.0 null GTEX-S3XE-2026-SM-3K2B5 GTEx Tissue Sample Gene Expression Profiles -1.0 -2.01728 tissues, cell types and enzyme sources TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.784804 hsa-miR-504 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.20993 wortmannin-1023 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null primary auditory cortex (core)_37 yrs_M_12303 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.988673 GABPA_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null ZNF263 ENCODE Transcription Factor Targets 1.0 null H2AFZ_B cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-X5EB-1826-SM-4E3K8 GTEx Tissue Sample Gene Expression Profiles 1.0 2.90446 MKN-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.0808 Skin Cutaneous Melanoma_SKCM_TCGA-EE-A182-06A-11R-A18T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null paclitaxel-1959 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null BACH1_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null 23132/87 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.947751 inferior occipital gyrus, right, superior bank of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.06405 spiramycin-3419 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null CTCF_limb_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SNU-668 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.31597 mantle zone of r10BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.91153 H3K79me3_C2C12_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null frontal pole, right, medial aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.99265 H3K4me3_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null methyldopate-7360 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null alfuzosin-5242 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GNL3 Pathway Commons Protein-Protein Interactions 1.0 null CTCF_MCF-7_hg19_7 ENCODE Transcription Factor Binding Site Profiles 1.0 null MXI1 ENCODE Transcription Factor Targets 1.0 null MAZ_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null cyproterone-3545 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null abducens motor nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.43367 hippocampus (hippocampal formation)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.24448 GTF2F1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NFYA JASPAR Predicted Transcription Factor Targets 1.0 null DDRGK1 Pathway Commons Protein-Protein Interactions 1.0 null pallidal islands of Calleja Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.00288 RPS4X Pathway Commons Protein-Protein Interactions 1.0 null NOA1 Pathway Commons Protein-Protein Interactions 1.0 null PA-TU-8902 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.91056 r4 part of basolateral reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.60601 GTEX-X5EB-0006-SM-46MV5 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.30898 POU2F2_GM12891_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Sarcoma_SARC_TCGA-DX-AB2X-01A-11R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ganglion TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null E2F4_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RAD21_H1-hESC_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Inflammation CTD Gene-Disease Associations 1.0 1.02447 FASTKD2 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-WFG7-0001-SM-3P61S GTEx Tissue Sample Gene Expression Profiles 1.0 2.21951 sulfathiazole-1883 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null TAL1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2910-03A-01T-0740-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-WZTO-0011-R4A-SM-3NMC7 GTEx Tissue Sample Gene Expression Profiles 1.0 0.833409 excretory gland TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.219707 POLR1C Pathway Commons Protein-Protein Interactions 1.0 null nervous system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null POLR2C Pathway Commons Protein-Protein Interactions 1.0 null primary oocyte TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.746689 EXOSC5 Pathway Commons Protein-Protein Interactions 1.0 null endocrine gland TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.506672 HCC1143 CCLE Cell Line Gene CNV Profiles 1.0 1.55785 H3K4me3_cardiac muscle cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null chlorprothixene-2627 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null NUGC-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.932657 stratum pyramidale of caudal CA2 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.2572 KDM4A_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PAX5_GM12878_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_ES-E14_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null dimethyloxalylglycine-584 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null POLR2A_K562_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-38-4632-01A-01R-1755-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null prostate GTEx Tissue Gene Expression Profiles 1.0 1.02212 mast cells BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -1.37986 MET_knockout_250_GDS3148 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -2.48936 HT-1197 GDSC Cell Line Gene Expression Profiles -1.0 -2.04064 CTCF_GM12873_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null AGBL1 Pathway Commons Protein-Protein Interactions 1.0 null accumbens nucleus, core domain Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.00004 CEBPD ENCODE Transcription Factor Targets 1.0 null GTEX-WWYW-3126-SM-3NB39 GTEx Tissue Sample Gene Expression Profiles 1.0 1.05275 Prostate adenocarcinoma_PRAD_TCGA-KC-A7F5-01A-11R-A33R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null olfactory bulb, principal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.13762 DB Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.49764 Lung adenocarcinoma_LUAD_TCGA-78-7146-01A-11R-2039-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Penis_Foreskin_Melanocyte_Primary_Cells_skin01 Roadmap Epigenomics Cell and Tissue Gene Expression Profiles 1.0 1.1765 CA3 field, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.63016 POLR2A_endothelial cell of umbilical vein_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null flufenamic acid-5059 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null CAL-33 GDSC Cell Line Gene Expression Profiles 1.0 1.67721 RTCB Pathway Commons Protein-Protein Interactions 1.0 null superficial stratum of r5Lim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.01701 Calu-3 GDSC Cell Line Gene Expression Profiles 1.0 1.44902 Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GR-7351-01A-11R-2213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TUBB2A Pathway Commons Protein-Protein Interactions 1.0 null cingulum bundle, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.24327 Cortical amygdalar area, posterior part, lateral zone, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.0916 mediodorsal nucleus of thalamus_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.01992 BCL3_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null HSD17B4 Pathway Commons Protein-Protein Interactions 1.0 null TAF1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_HCT116_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null ELF1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-UJMC-0008-SM-4IHKK GTEx Tissue Sample Gene Expression Profiles 1.0 1.14342 inferolateral temporal cortex (area TEv, area 20)_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -2.01703 dioxybenzone-5699 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null mediodorsal nucleus of thalamus_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.60253 GTEX-XMD1-0011-R11A-SM-4AT5J GTEx Tissue Sample Gene Expression Profiles -1.0 -1.39769 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4167-01A-02R-1325-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CA2 field, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 2.12719 PAX5_GM12891_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null MYC_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null flunarizine-7412 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null intracellular membrane-bounded organelle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.197993 H3K4me1_K562_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null NCI-H2110 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.31406 RPL32 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_brown adipose tissue_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null NCIH522 CCLE Cell Line Gene CNV Profiles -1.0 -2.07223 Fatty Liver CTD Gene-Disease Associations 1.0 1.08904 POLR2A_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-DS-A0VM-01A-11R-A10U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-G6-A8L7-01A-11R-A37O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null FOXP1 ChEA Transcription Factor Targets 1.0 null thioridazine-5590 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null tanespimycin-6978 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-U3ZH-1526-SM-4DXV1 GTEx Tissue Sample Gene Expression Profiles 1.0 1.20073 GTEX-T6MN-2026-SM-4DM7L GTEx Tissue Sample Gene Expression Profiles 1.0 1.17009 CUL7 Pathway Commons Protein-Protein Interactions 1.0 null Crus 2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.02383 CTCF_MEL cell line_mm9_6 ENCODE Transcription Factor Binding Site Profiles 1.0 null mecamylamine-3525 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-FR-A728-01A-11R-A32P-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null IGF2BP2 Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XBEC-1526-SM-4AT68 GTEx Tissue Sample Gene Expression Profiles 1.0 0.874956 TAF1_PFSK-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null OCI-AML3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.846548 GTEX-P4QS-1626-SM-2S1NH GTEx Tissue Sample Gene Expression Profiles -1.0 -1.04395 MOLT-16 COSMIC Cell Line Gene Mutation Profiles 1.0 null H3K4me1_kidney_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null posterior (caudal) superior temporal cortex (area 22c)_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.7361 YY1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null RAD21_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCIH2081 CCLE Cell Line Gene CNV Profiles -1.0 -1.52288 peroxisome LOCATE Predicted Protein Localization Annotations 1.0 null superficial stratum of r1BL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.48813 YWHAQ Pathway Commons Protein-Protein Interactions 1.0 null SMC3_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null outer SZ in posterior parahippocampal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.22073 U2SURP Pathway Commons Protein-Protein Interactions 1.0 null Secondary motor area, layer 6a Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.19138 thiostrepton-4563 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null RCOR1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EPRS Pathway Commons Protein-Protein Interactions 1.0 null ECGI10 CCLE Cell Line Gene Expression Profiles -1.0 -1.58628 Pheochromocytoma and Paraganglioma_PCPG_TCGA-SP-A6QC-01A-11R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ILF2 Pathway Commons Protein-Protein Interactions 1.0 null forelimb TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.102414 ZC3H11A Pathway Commons Protein-Protein Interactions 1.0 null r11 part of spinal trigeminal nucleus, caudal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.34174 anterior (rostral) cingulate (medial prefrontal) cortex_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.33443 NCI-N87 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.89836 EIF3M Pathway Commons Protein-Protein Interactions 1.0 null RBBP4 Pathway Commons Protein-Protein Interactions 1.0 null USP10 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-UJHI-1726-SM-3DB9B GTEx Tissue Sample Gene Expression Profiles -1.0 -0.943617 COLO 741 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.27012 FOXM1 ENCODE Transcription Factor Targets 1.0 null BL6415 (BCR) NURSA Protein Complexes 1.0 null amygdaloid complex_19 yrs_F_12832 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.71965 H3K4me3_kidney epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_cardiac mesoderm_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null primary auditory cortex (core)_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.89026 DB CCLE Cell Line Gene CNV Profiles -1.0 -1.69552 primary auditory cortex (core)_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 2.1945 whole plant TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.056497 REST_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null RPS14 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me1_myotube_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-JW-A852-01A-11R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MAX_HeLa-S3_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null oxybutynin-3168 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H3K4me3_CD14-positive monocyte_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-T6MN-0005-SM-32PLJ GTEx Tissue Sample Gene Expression Profiles -1.0 -0.98858 GTEX-XXEK-1326-SM-4BRV1 GTEx Tissue Sample Gene Expression Profiles 1.0 0.82679 H3K9ac_skeletal muscle myoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null U266B1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.05659 POLR2AphosphoS5_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null PSMB1 Pathway Commons Protein-Protein Interactions 1.0 null reproductive system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.308612 IRF1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_fibroblast of lung_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null mRNA_MYC_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null GTEX-W5WG-0006-SM-3GIJT GTEx Tissue Sample Gene Expression Profiles -1.0 -1.29884 CA4 field, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.37247 CHD2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_fibroblast of lung_hg19_5 ENCODE Histone Modification Site Profiles 1.0 null H3K27ac_A549_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H3K4me1_A549_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-R53T-2026-SM-3GIJF GTEx Tissue Sample Gene Expression Profiles -1.0 -1.15732 TMEM109 Pathway Commons Protein-Protein Interactions 1.0 null POU5F1 ChEA Transcription Factor Targets 1.0 null Perturb_6794_KD_PAF1_SRP060227 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 1.31334 SK-N-DZ Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.923941 GTEX-RUSQ-0226-SM-47JWT GTEx Tissue Sample Gene Expression Profiles 1.0 1.31293 POLR2A_A549_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_osteoblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ovary TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.058415 GTEX-T6MN-2626-SM-32PMQ GTEx Tissue Sample Gene Expression Profiles 1.0 2.29322 amygdaloid complex_16 pcw_M_12879 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.13175 AM-38 COSMIC Cell Line Gene Mutation Profiles 1.0 null H3K4me1_CH12.LX_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null RAD21_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-Q2AI-0226-SM-48U1D GTEx Tissue Sample Gene Expression Profiles 1.0 0.85402 JEKO1 CCLE Cell Line Gene CNV Profiles -1.0 -1.90158 DACH1 ChEA Transcription Factor Targets 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-2Z-A9J2-01A-11R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null organic cyclic compound biosynthetic process GO Biological Process Annotations 2015 1.0 null primary somatosensory cortex (area S1, areas 3,1,2)_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.39348 Lung squamous cell carcinoma_LUSC_TCGA-60-2724-01A-01R-0851-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MAX_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null USF2_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-TMMY-0626-SM-33HBD GTEx Tissue Sample Gene Expression Profiles -1.0 -0.880241 GTEX-T6MN-0011-R5A-SM-32QPD GTEx Tissue Sample Gene Expression Profiles 1.0 1.02656 XRN2 Pathway Commons Protein-Protein Interactions 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-D6-A6EM-01A-21R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-T2IS-2626-SM-32QPP GTEx Tissue Sample Gene Expression Profiles -1.0 -0.969349 Brain Lower Grade Glioma_LGG_TCGA-FG-A6J3-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A70R-01A-11R-A35K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NOLC1 Pathway Commons Protein-Protein Interactions 1.0 null ZNF143_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ESF1 Pathway Commons Protein-Protein Interactions 1.0 null SLC3A2 Pathway Commons Protein-Protein Interactions 1.0 null POLR2AphosphoS5_SK-N-SH_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MDA-MB-361 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.05461 STAT3_MCF 10A_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null NUGC2 CCLE Cell Line Gene CNV Profiles -1.0 -1.40668 GTEX-U3ZM-0126-SM-3DB8M GTEx Tissue Sample Gene Expression Profiles 1.0 1.05949 HS172T CCLE Cell Line Gene Expression Profiles -1.0 -2.31932 Pancreatic adenocarcinoma_PAAD_TCGA-OE-A75W-01A-12R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-S95S-1126-SM-4B64E GTEx Tissue Sample Gene Expression Profiles 1.0 1.03103 PRKAB2 Pathway Commons Protein-Protein Interactions 1.0 null SRSF3 Pathway Commons Protein-Protein Interactions 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-E7-A7DV-01A-11R-A33J-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-RWS6-0005-SM-2XCAN GTEx Tissue Sample Gene Expression Profiles -1.0 -0.838549 ZBTB7A ENCODE Transcription Factor Targets 1.0 null chlorhexidine-1942 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4813-01A-01R-1277-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-NFK9-0626-SM-2HMIV GTEx Tissue Sample Gene Expression Profiles -1.0 -0.903561 NCI-H2052 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.896089 ZC3H11A_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HINFP JASPAR Predicted Transcription Factor Targets 1.0 null MYC_NB4_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_astrocyte of the spinal cord_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null CTCF_MEL cell line_mm9_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null DDX5 Pathway Commons Protein-Protein Interactions 1.0 null Perturb_6766_KD_PAF1_SRP103746 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 4.40205 H3K4me1_spleen_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null adenocarcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.340906 septopallidal part of the olfactory tuberculum Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.10381 MRPS2 Pathway Commons Protein-Protein Interactions 1.0 null r7 part of the posteroventral cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.31672 PIK3CA NURSA Protein-Protein Interactions 1.0 0.042554 H3K27ac_IMR90 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-KQ-A41N-01A-11R-A33J-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hsa-miR-296-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.7397 r10 part of spinal trigeminal nucleus, caudal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.71373 GTEX-T6MN-2726-SM-4DM77 GTEx Tissue Sample Gene Expression Profiles 1.0 1.98849 H3K4me2_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null carbenoxolone-3014 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null heterocycle metabolic process GO Biological Process Annotations 2015 1.0 null PPP5C Pathway Commons Protein-Protein Interactions 1.0 null ifenprodil-5463 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null REST_PFSK-1_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null KURAMOCHI Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.29216 KARS Pathway Commons Protein-Protein Interactions 1.0 null RPLP1 Pathway Commons Protein-Protein Interactions 1.0 null Hyperplasia CTD Gene-Disease Associations 1.0 1.27626 hyoscyamine-5524 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H3K4me3_HeLa-S3_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null RPL21 Pathway Commons Protein-Protein Interactions 1.0 null clomifene-2624 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null muscle GTEx Tissue Gene Expression Profiles -1.0 -2.01865 CTCF_cardiac muscle cell_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_Panc1_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null RPS2 Pathway Commons Protein-Protein Interactions 1.0 null OB glomerular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.31029 20559987-TableS1 GeneSigDB Published Gene Signatures 1.0 null CPSF7 Pathway Commons Protein-Protein Interactions 1.0 null HCC827 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.152 Acute Myeloid Leukemia_LAML_TCGA-AB-2856-03A-01T-0736-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null FLI1_megakaryocyte_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null MYBBP1A Pathway Commons Protein-Protein Interactions 1.0 null Pheochromocytoma and Paraganglioma_PCPG_TCGA-S7-A7WO-01A-11R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null folic acid_homo sapiens_gpl2700_gds3656 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null ZC3H15 Pathway Commons Protein-Protein Interactions 1.0 null H3K9ac_heart_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-WZTO-0426-SM-3NM99 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.938271 hematopoietic system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.221521 MYC_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null I-II Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.07404 H3K27ac_placenta_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-OIZG-1326-SM-2HMIQ GTEx Tissue Sample Gene Expression Profiles -1.0 -0.978434 RC-K8 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.946072 periaqueductal gray substance, dorsolateral portion Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.874437 GTEX-XUJ4-0008-SM-4BOQI GTEx Tissue Sample Gene Expression Profiles 1.0 1.40836 outer CP in temporal polar cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.06682 SIN3A ENCODE Transcription Factor Targets 1.0 null GTEX-WWYW-0005-SM-3NB3K GTEx Tissue Sample Gene Expression Profiles -1.0 -1.11182 RBM26 Pathway Commons Protein-Protein Interactions 1.0 null RSL1D1 Pathway Commons Protein-Protein Interactions 1.0 null periventricular stratum of PalSe Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.35199 lateral part of r4B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.4266 Perturb_9194_KD_DDX3X_SRP299259 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 KELLY CCLE Cell Line Gene Expression Profiles -1.0 -1.4979 HGC27 CCLE Cell Line Gene CNV Profiles -1.0 -1.54411 Lung squamous cell carcinoma_LUSC_TCGA-66-2763-01A-01R-0851-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null extracellular region COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.159268 mantle zone of SeStr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.00208 H3K4me3_astrocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me1_thymus_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null VZ in caudal hippocampal proper Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -2.92332 orbital frontal cortex_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.832067 asiaticoside-3504 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null SP1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-OOBK-2126-SM-3LK5T GTEx Tissue Sample Gene Expression Profiles 1.0 1.08786 EBF1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null myeloid progenitor cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.070787 primary motor cortex (area M1, area 4)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.31481 H3K4me1_IMR90 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null single-organism metabolic process GO Biological Process Annotations 2015 1.0 null HNRNPA1 Pathway Commons Protein-Protein Interactions 1.0 null SG in frontal polar cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.25662 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-VS-A8EJ-01A-11R-A37O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_WI38_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_WERI-Rb-1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null adult retina HPM Cell Type and Tissue Protein Expression Profiles 1.0 1.14787 inner SZ in superolateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.25672 betonicine-2207 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null MAPK3 Pathway Commons Protein-Protein Interactions 1.0 null NTERA-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.05936 PRKAG1 Pathway Commons Protein-Protein Interactions 1.0 null fallopiantube_8d HPA Tissue Sample Gene Expression Profiles 1.0 1.75496 lateral habenular nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.06217 RPLP2 Pathway Commons Protein-Protein Interactions 1.0 null KURAMOCHI GDSC Cell Line Gene Expression Profiles 1.0 2.23472 GTEX-O5YU-0008-SM-4E3I7 GTEx Tissue Sample Gene Expression Profiles 1.0 1.09127 CHD1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_8307_OE_GALNT3_ERP012063 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 2.56495 H3K9ac_NT2-D1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Accessory olfactory bulb Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.26251 mantle zone of r3Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.66934 EIF3A Pathway Commons Protein-Protein Interactions 1.0 null fluphenazine-5597 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null rofecoxib-256 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null periventricular stratum of r4Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.18833 COLGALT1 Pathway Commons Protein-Protein Interactions 1.0 null CTCF_LNCaP clone FGC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null vitexin-2155 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null MDM2 Pathway Commons Protein-Protein Interactions 1.0 null SNUC1 CCLE Cell Line Gene Expression Profiles 1.0 1.49264 GTEX-X4XY-0826-SM-4E3JM GTEx Tissue Sample Gene Expression Profiles 1.0 1.54551 GTEX-XGQ4-0426-SM-4AT4I GTEx Tissue Sample Gene Expression Profiles 1.0 1.56636 TDRD12 Pathway Commons Protein-Protein Interactions 1.0 null TFAP2C ChEA Transcription Factor Targets 1.0 null TAF1 ENCODE Transcription Factor Targets 1.0 null GTEX-WRHU-0226-SM-3MJFV GTEx Tissue Sample Gene Expression Profiles -1.0 -0.84065 Secondary motor area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.58287 organelle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.049051 KURAMOCHI COSMIC Cell Line Gene CNV Profiles 1.0 2.41451 CTCF_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-RVPV-0006-SM-2TF6Q GTEx Tissue Sample Gene Expression Profiles -1.0 -1.65148 H3K4me3_megakaryocyte_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null CTCF_brain_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EIF3E Pathway Commons Protein-Protein Interactions 1.0 null MAX_HCT116_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_iPS DF 6.9 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null DLD1 BioGPS Cell Line Gene Expression Profiles 1.0 1.26769 endocrine gland TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null TAF1_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null RPS23 Pathway Commons Protein-Protein Interactions 1.0 null thyroid GTEx Tissue Gene Expression Profiles 1.0 0.835111 GTEX-WYVS-2326-SM-3NMAI GTEx Tissue Sample Gene Expression Profiles -1.0 -1.02375 Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-A4CD-01A-21R-A24Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ISTMES2 CCLE Cell Line Gene Expression Profiles 1.0 1.52521 MAX_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_bone marrow macrophage_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_HeLa-S3_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null HS-578-T COSMIC Cell Line Gene CNV Profiles 1.0 2.41451 palmatine-4957 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null inner portion of medial ganglionic eminence Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.00393 striatum_19 yrs_F_12832 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.836729 POLR2A_HepG2_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XUW1-1026-SM-4BONY GTEx Tissue Sample Gene Expression Profiles 1.0 0.961559 carboxylic acid biosynthetic process GO Biological Process Annotations 2015 1.0 null NCI-H510A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.152 sitosterol-4073 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null chlorzoxazone-7456 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null E2F1 ChEA Transcription Factor Targets 1.0 null RPL19 Pathway Commons Protein-Protein Interactions 1.0 null CTCF_GM12878_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null TCF7 ChEA Transcription Factor Targets 1.0 null H3K79me2_astrocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-QDVN-0006-SM-48U1R GTEx Tissue Sample Gene Expression Profiles -1.0 -2.09374 GTEX-OXRP-2326-SM-2S1NL GTEx Tissue Sample Gene Expression Profiles -1.0 -1.10608 HCC2911 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.3946 RARS Pathway Commons Protein-Protein Interactions 1.0 null Lung adenocarcinoma_LUAD_TCGA-95-7948-01A-11R-2187-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MXI1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-T6MN-0626-SM-32PM9 GTEx Tissue Sample Gene Expression Profiles 1.0 0.946901 USP28 Pathway Commons Protein-Protein Interactions 1.0 null CTCF_GM19238_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H209 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.846548 H3K4me3_retinal pigment epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null extracellular region part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.044683 GTEX-TSE9-0005-SM-4DXUF GTEx Tissue Sample Gene Expression Profiles -1.0 -1.29211 TJP1 Pathway Commons Protein-Protein Interactions 1.0 null viscus TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.385896 Perturb_10160_KD_TNFAIP8_SRP271403 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 16.5616 GTEX-XMK1-0626-SM-4B65A GTEx Tissue Sample Gene Expression Profiles 1.0 1.4349 estradiol-1241 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null elastic fiber COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.236683 COLO 320DM Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.00944 HCC1187 COSMIC Cell Line Gene CNV Profiles 1.0 2.41451 Accessory olfactory bulb, glomerular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.18693 MZ in rostral entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.01298 primary motor-sensory cortex (samples)_8 pcw_M_13058 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.977985 BL7244 (MAST4) NURSA Protein Complexes 1.0 null laterodorsal subdivision of area 8 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.89039 SNU869 CCLE Cell Line Gene CNV Profiles -1.0 -2.49572 GTEX-X4XY-1626-SM-46MVN GTEx Tissue Sample Gene Expression Profiles 1.0 4.32298 H3K4me3_limb_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Perturb_3929_KD_STEAP3AS1_SRP387944 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 FOXA2 ENCODE Transcription Factor Targets 1.0 null SOD2_KO_GDS1080_128_mouse_heart GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null BHLHE40_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Orbital area, ventrolateral part, layer 5 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.29574 POLR2AphosphoS2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CHD7 ENCODE Transcription Factor Targets 1.0 null H3K27ac_cerebellum_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null CA3 field, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.82374 RH18 CCLE Cell Line Gene Expression Profiles -1.0 -1.8254 PTCD3 Pathway Commons Protein-Protein Interactions 1.0 null superficial stratum of r3Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.01831 dorsolateral prefrontal cortex_10 mos_M_12977 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.04777 USF2_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_fibroblast of skin of abdomen_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-49-4514-01A-21R-1858-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-QCQG-2126-SM-2S1P8 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.19342 organism form TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.391553 H2BK12ac_H1 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null POLR2AphosphoS2_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_Panc1_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null IRF4_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EIF3K Pathway Commons Protein-Protein Interactions 1.0 null NFYA_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ERBB2_knockdown_233_GSE8373 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -2.12272 H3K4me3_HepG2_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null FLI1-21571218-MEGAKARYOCYTES-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null TRIM28_02_63 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.60326 IZ in caudal perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.29614 E2F6 ENCODE Transcription Factor Targets 1.0 null REST_myocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ZNF384 ENCODE Transcription Factor Targets 1.0 null r2 part of cochlear sensory column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.13341 POLR2AphosphoS2_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TARDBP Pathway Commons Protein-Protein Interactions 1.0 null H4K5ac_H9 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null CTCF_GM06990_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RPS3 Pathway Commons Protein-Protein Interactions 1.0 null TAF1_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K36me3_astrocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCC202 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.00019 GTEX-UTHO-0726-SM-3GAEN GTEx Tissue Sample Gene Expression Profiles -1.0 -1.5953 MXI1_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null thiamine-2894 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null FOS ENCODE Transcription Factor Targets 1.0 null Dorsal peduncular area, layer 6a Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.21421 clemastine-7443 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-XXEK-0926-SM-4BRWH GTEx Tissue Sample Gene Expression Profiles -1.0 -0.967906 YY1_KD_GDS3788_488_human_HeLa GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null medial mammillary nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.910793 FOS_MCF 10A_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null ATAD3A Pathway Commons Protein-Protein Interactions 1.0 null UBA52 Pathway Commons Protein-Protein Interactions 1.0 null hsa-miR-4299 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.55165 r3 part of spinal trigeminal sensory column, oral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.43465 Orbital area, ventrolateral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.28717 primary motor cortex (area M1, area 4)_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.4776 selegiline-2826 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-QVUS-0008-SM-447AY GTEx Tissue Sample Gene Expression Profiles 1.0 0.913467 CSNK1D Pathway Commons Protein-Protein Interactions 1.0 null chloroplast part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.057241 TCF12_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Neuro D MotifMap Predicted Transcription Factor Targets 1.0 null conessine-2135 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null hsa-miR-3689a-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 0.880544 H3K79me2_K562_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null t47d HPA Cell Line Gene Expression Profiles 1.0 1.03258 C7orf50 Pathway Commons Protein-Protein Interactions 1.0 null TAF1_PFSK-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null hsa-miR-1976 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.7397 monorden-999 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null POLR2A_HeLa-S3_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CDC42 Pathway Commons Protein-Protein Interactions 1.0 null DDX56 Pathway Commons Protein-Protein Interactions 1.0 null stratum pyramidale of rostral CA2 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.09025 SIN3A_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null hippocampus (hippocampal formation)_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.0587 POLR2AphosphoS5_Panc1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null KYSE-510 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.852048 Perturb_12645_KD_SIRT5_SRP311327 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 Edinger-Westphal nucleus (accessory oculomotor nucleus) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.19607 PAX5_GM12892_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null USF1_C2C12_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K36me3_MEL cell line_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_HL-60_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null CTCF_GM12874_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CCDC86 Pathway Commons Protein-Protein Interactions 1.0 null rofecoxib-251 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null hippocampus (hippocampal formation)_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.870164 STAT1 ENCODE Transcription Factor Targets 1.0 null MDA-MB-453 cell ProteomicsDB Cell Type and Tissue Protein Expression Profiles 1.0 0.919975 GTEX-SIU7-0006-SM-2XCE6 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.42117 hsa-miR-3170 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.880544 NCI-H1435 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.988531 22RV1 COSMIC Cell Line Gene Mutation Profiles 1.0 null tanespimycin-5203 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H3K4me3_GM12878_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null primary auditory cortex (core)_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.34814 BV-173 GDSC Cell Line Gene Expression Profiles 1.0 1.55711 hsa-miR-3175 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.843347 GTEX-POYW-0726-SM-2XCEO GTEx Tissue Sample Gene Expression Profiles -1.0 -1.43984 SART1 Pathway Commons Protein-Protein Interactions 1.0 null CTCF_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null protein binding GO Molecular Function Annotations 2015 1.0 null POLR2A_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null IM-95M Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.846548 POLR2A_A549_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_cardiac mesoderm_hg19_4 ENCODE Histone Modification Site Profiles 1.0 null Perturb_10894_KO_Jnk1/Jnk2_SRP038635 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 10.6918 r2 part of vestibular nucleus Y Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.20855 cerebellar cortex_1 yrs_F_12830 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.874384 NOC3L Pathway Commons Protein-Protein Interactions 1.0 null TEAD4_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-QXCU-0006-SM-2TC5K GTEx Tissue Sample Gene Expression Profiles -1.0 -1.03628 lung TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null SRSF6 Pathway Commons Protein-Protein Interactions 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4352-01A-01R-1289-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MYC_K562_hg19_6 ENCODE Transcription Factor Binding Site Profiles 1.0 null molecular_function GO Molecular Function Annotations 2015 1.0 null H3K4me3_HepG2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EX-A449-01A-11R-A32Y-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null prochlorperazine-2641 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null SUIT-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.37564 H3K4me3_epithelial cell of proximal tubule_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_lung_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RKO Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles 1.0 null GTEX-R55C-0326-SM-3GAF1 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.25478 H3K4me1_cerebellum_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null BCLAF1 ENCODE Transcription Factor Targets 1.0 null CTCF_GM12867_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-POMQ-0006-SM-33HBY GTEx Tissue Sample Gene Expression Profiles -1.0 -1.58773 OMC-1 GDSC Cell Line Gene Expression Profiles -1.0 -1.68646 cell culture TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.064511 Skin Cutaneous Melanoma_SKCM_TCGA-EB-A3Y7-01A-11R-A239-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SNU-407 COSMIC Cell Line Gene Mutation Profiles 1.0 null depudecin-874 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null G-402 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.905819 SNU119 CCLE Cell Line Gene CNV Profiles 1.0 3.26194 GTEX-RU72-3126-SM-46MUB GTEx Tissue Sample Gene Expression Profiles 1.0 1.1151 YY1_HCT116_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null YY1_SK-N-SH_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null FOXM1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BAG2 Pathway Commons Protein-Protein Interactions 1.0 null SG in rostral perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.28253 CTCF_fibroblast of villous mesenchyme_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_brain microvascular endothelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CCT2 Pathway Commons Protein-Protein Interactions 1.0 null parasolitary nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.905445 Liver hepatocellular carcinoma_LIHC_TCGA-G3-AAV5-01A-11R-A37K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-TMMY-0426-SM-33HBB GTEx Tissue Sample Gene Expression Profiles -1.0 -2.0824 HADHB Pathway Commons Protein-Protein Interactions 1.0 null H3K27ac_fibroblast of lung_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6003-01A-11R-1686-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-P4PP-0326-SM-33HC4 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.04949 TOLEDO CCLE Cell Line Gene Expression Profiles 1.0 1.59873 GTEX-SE5C-0626-SM-2XCDV GTEx Tissue Sample Gene Expression Profiles -1.0 -0.961615 U251MG CCLE Cell Line Gene Expression Profiles -1.0 -1.55461 parietal neocortex_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.78499 A549 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles 1.0 null SNW1 Pathway Commons Protein-Protein Interactions 1.0 null COV362 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.60538 NHP2L1 Pathway Commons Protein-Protein Interactions 1.0 null SNU1079 CCLE Cell Line Gene Expression Profiles -1.0 -1.63456 miconazole-4960 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null ATF2_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ventrolateral prefrontal cortex_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.13601 H3K27ac_HepG2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null ATP5F1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-N7MS-0126-SM-3TW8O GTEx Tissue Sample Gene Expression Profiles 1.0 0.902535 clomifene-6648 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null geldanamycin-6187 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null large intestine TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.233162 olfactory bulb Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.38168 EIF3B Pathway Commons Protein-Protein Interactions 1.0 null r11 part of the trigeminal column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.34077 cytosol COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.360133 Kidney renal papillary cell carcinoma_KIRP_TCGA-G7-6796-01A-11R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-R55C-1726-SM-3GADJ GTEx Tissue Sample Gene Expression Profiles -1.0 -0.918903 chrysin-5505 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null sirolimus-7001 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null 18631401-TableS3 GeneSigDB Published Gene Signatures 1.0 null H3K4me3_fibroblast of upper leg skin_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Anterior olfactory nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.40892 Perturb_283_KD_BRD9_SRP303690 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 DDOST Pathway Commons Protein-Protein Interactions 1.0 null CTCF_spleen_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-EB-A5SH-06A-11R-A311-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null eye disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.054175 ventricular (matrix) zone of pons Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.89135 MAX_myocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null VZ in hypothalamic portion Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.66915 GTEX-R53T-1826-SM-3GIJX GTEx Tissue Sample Gene Expression Profiles -1.0 -1.33577 proteinaceous extracellular matrix COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.229532 inferior olive, principal nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.890684 USP7 Pathway Commons Protein-Protein Interactions 1.0 null eGFP-JUNB_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HNRNPA3 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_mononuclear cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null CTCF_MCF-7_hg19_9 ENCODE Transcription Factor Binding Site Profiles 1.0 null CiliaryGanglion BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.58019 CTCF_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TCP1 Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_ES-Bruce4_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-OXRL-0008-SM-3NB29 GTEx Tissue Sample Gene Expression Profiles 1.0 0.966782 AOB, granular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.27027 culture medium TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.219264 GTEX-U8XE-0726-SM-3DB8O GTEx Tissue Sample Gene Expression Profiles -1.0 -0.890287 RPS9 Pathway Commons Protein-Protein Interactions 1.0 null anterior (rostral) cingulate (medial prefrontal) cortex_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.08625 catalytic activity GO Molecular Function Annotations 2015 1.0 null posteroventral (inferior) parietal cortex_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.18108 ZMIZ1 ENCODE Transcription Factor Targets 1.0 null H2AFZ_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-MT-A7BN-01A-12R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HARA CCLE Cell Line Gene Expression Profiles 1.0 1.70537 H3K4me3_cardiac muscle cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null NCI-H1781 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.00226 HCC2218 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.828165 LARP1 Pathway Commons Protein-Protein Interactions 1.0 null posteroventral (inferior) parietal cortex_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 2.54174 GTEX-T5JW-2026-SM-4DM63 GTEx Tissue Sample Gene Expression Profiles 1.0 1.5746 Lung adenocarcinoma_LUAD_TCGA-62-A46S-01A-11R-A24H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null USF2_MEL cell line_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null NFYB_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TP53 Pathway Commons Protein-Protein Interactions 1.0 null ZC3H11A ENCODE Transcription Factor Targets 1.0 null CTCF_GM12865_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XOTO-0006-SM-4B64T GTEx Tissue Sample Gene Expression Profiles -1.0 -1.28402 RPS12 Pathway Commons Protein-Protein Interactions 1.0 null Orbital area, ventrolateral part, layer 6a Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.01726 POLR2A_MCF-7_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CDK2AP1 Pathway Commons Protein-Protein Interactions 1.0 null orbital frontal cortex_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.988347 Secondary motor area, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.58057 GTEX-S33H-1826-SM-4AD65 GTEx Tissue Sample Gene Expression Profiles 1.0 1.4517 Skin Cutaneous Melanoma_SKCM_TCGA-FR-A2OS-01A-11R-A21D-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null meclofenamic acid-7038 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null NRF1 ENCODE Transcription Factor Targets 1.0 null LAN-6 GDSC Cell Line Gene Expression Profiles -1.0 -1.79195 NCI-H920 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 2.05996 CTCF_MEL cell line_mm9_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27ac_spleen_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null HCC1937 CCLE Cell Line Gene Expression Profiles 1.0 2.1078 H3K4me3_fibroblast of lung_hg19_7 ENCODE Histone Modification Site Profiles 1.0 null GTEX-U3ZH-0005-SM-3DB72 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.835262 cingulum bundle, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -2.06998 FOXA1_T47D_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Aorta Roadmap Epigenomics Cell and Tissue Gene Expression Profiles -1.0 -0.99271 H3K27ac_K562_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null SAP30_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WHSB-1626-SM-3LK6J GTEx Tissue Sample Gene Expression Profiles 1.0 0.871833 buspirone-5343 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-T5JW-1726-SM-3GADN GTEx Tissue Sample Gene Expression Profiles 1.0 1.37107 liver TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.426109 gland TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.474258 H3K4me2_skeletal muscle myoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null RUNX3 ENCODE Transcription Factor Targets 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-33-4532-01A-01R-1201-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CIRBP Pathway Commons Protein-Protein Interactions 1.0 null PRKDC Pathway Commons Protein-Protein Interactions 1.0 null inner CP in caudal perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.03969 SIN3A_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null submandibular gland TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.708041 outer portion of medial ganglionic eminence Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.03743 cellular biosynthetic process GO Biological Process Annotations 2015 1.0 null COLO 741 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.71721 TAL1 ENCODE Transcription Factor Targets 1.0 null PrefrontalCortex BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 1.02941 Liver hepatocellular carcinoma_LIHC_TCGA-FV-A4ZP-01A-12R-A266-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_CD19 Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Parabrachial nucleus, medial division, external medial part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.00179 MYC_HeLa-S3_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null sirolimus-4431 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null hsa-miR-4419b TargetScan Predicted Nonconserved microRNA Targets 1.0 1.20993 H3K4me3_cardiac mesoderm_hg19_6 ENCODE Histone Modification Site Profiles 1.0 null bepridil-2629 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null hsa-miR-3689c TargetScan Predicted Nonconserved microRNA Targets 1.0 0.880544 carboxylic acid metabolic process GO Biological Process Annotations 2015 1.0 null hl60 HPA Cell Line Gene Expression Profiles -1.0 -0.836999 septostriatal part of the olfactory tuberculum Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.0254 GTEX-T6MN-0011-R7A-SM-32QP5 GTEx Tissue Sample Gene Expression Profiles 1.0 1.18901 H3K4me2_A549_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K9ac_keratinocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null ctnnb1_19652203_myeloma_lof_human_gpl570_gds3578 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.549539 layer III of rostral entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.897858 MALME 3M BioGPS Cell Line Gene Expression Profiles -1.0 -1.13466 inner SZ in posteror frontal cortex (motor cortex) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.867339 primary motor cortex (area M1, area 4)_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 2.52757 POLR2A_brain_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SU-DHL-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.895861 hsa-miR-4478 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.2992 Orbital area, medial part, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.43674 YY1_SK-N-SH_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null dorsorostral division of MFC (area 32) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.0069 H3K27ac_skeletal muscle myoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-X585-0002-SM-46MVA GTEx Tissue Sample Gene Expression Profiles 1.0 1.02974 PML_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null T84 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.02734 GTEX-WYBS-1926-SM-3NM8N GTEx Tissue Sample Gene Expression Profiles 1.0 1.08555 Retinitis Pigmentosa_Retina_GSE128 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -1.5103 AMO-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.852048 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6948-01A-11R-1915-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HNRNPUL2 Pathway Commons Protein-Protein Interactions 1.0 null LNCAP BioGPS Cell Line Gene Expression Profiles 1.0 1.43209 E2F6_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null hycanthone-5691 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null superficial stratum of r3Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.43465 cerebellum_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.19392 BCL11A ENCODE Transcription Factor Targets 1.0 null Abducens nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.06157 H3K4me1_mononuclear cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null KPNB1 Pathway Commons Protein-Protein Interactions 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4821-01A-01R-1503-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TAF1_GM12891_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null LRPPRC Pathway Commons Protein-Protein Interactions 1.0 null ciprofloxacin-5299 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null NCI-H847 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.55256 CTCF_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null IPO9 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-OOBJ-2626-SM-2I3F6 GTEx Tissue Sample Gene Expression Profiles 1.0 0.979012 benzocaine-2167 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null RPL23 Pathway Commons Protein-Protein Interactions 1.0 null PHF5A Pathway Commons Protein-Protein Interactions 1.0 null Perturb_6729_KD_jouvence_SRP288327 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 periventricular stratum of r7Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.09547 Perturb_17610_OE_U2AF35_SRP116787 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -3.42126 r3 part of anteroventral cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.01831 u26684 HPA Cell Line Gene Expression Profiles -1.0 -1.22498 0317956-0000-3858 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Main olfactory bulb Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.18817 hsa-miR-3151 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.965816 H3K27ac_Panc1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null ECGI10 CCLE Cell Line Gene CNV Profiles -1.0 -1.43116 GTEX-WHSB-0005-SM-3LK7C GTEx Tissue Sample Gene Expression Profiles -1.0 -0.85035 Simple lobule, granular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.00513 gland TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null embryoday8.5 BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 1.19064 DHX15 Pathway Commons Protein-Protein Interactions 1.0 null anterior (rostral) cingulate (medial prefrontal) cortex_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.2229 MFE-319 COSMIC Cell Line Gene Mutation Profiles 1.0 null NFATC1 ENCODE Transcription Factor Targets 1.0 null MFM-223 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.874739 NCI-H1781 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.5132 H3K4me3_fibroblast of skin of abdomen_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null MX-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.43572 forebrain TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null CTCF_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HS 675.T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.16428 doxylamine-1893 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null invertebrate muscular system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.590437 superficial stratum of r5Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.02466 GTEX-PWOO-0006-SM-2I3E3 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.71389 RRP12 Pathway Commons Protein-Protein Interactions 1.0 null LARS Pathway Commons Protein-Protein Interactions 1.0 null REST_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WH7G-0005-SM-3NMBX GTEx Tissue Sample Gene Expression Profiles -1.0 -1.88571 striatum_37 yrs_M_12303 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.36865 CTCF_G1E_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-33-4589-01A-01R-1443-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2A_testis_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-X62O-1626-SM-46MW9 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.889947 CAOV-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.1245 alpha-ergocryptine-3434 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null NCI-H727 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles 1.0 null GTEX-V955-0005-SM-3P5ZC GTEx Tissue Sample Gene Expression Profiles -1.0 -1.24439 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EK-A2PG-01A-11R-A18M-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung adenocarcinoma_LUAD_TCGA-86-8673-01A-11R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-WL46-0011-R3A-SM-3TW8E GTEx Tissue Sample Gene Expression Profiles 1.0 1.50565 SP1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null COLO 679 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.23839 diflunisal-1908 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null ajmaline-7484 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null EIF4G1 Pathway Commons Protein-Protein Interactions 1.0 null NCI-H929 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.01714 clomifene-4994 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null throat TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null Anterior cingulate area, dorsal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.52738 fulvestrant-7534 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-XPT6-0006-SM-4B66Q GTEx Tissue Sample Gene Expression Profiles -1.0 -1.07849 Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-G8-6906-01A-11R-2213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K27ac_heart_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null medial ganglionic eminence_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.958203 tanespimycin-5223 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null POU2F2_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-TSE9-3126-SM-4DXSY GTEx Tissue Sample Gene Expression Profiles 1.0 0.925679 Simple lobule Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.02466 AKAP8 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_retinal pigment epithelial cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H3K9ac_liver_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null tanespimycin-6177 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H3K4me3_HEK293_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null CBX3_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Infralimbic area, layer 2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.54915 HSPA1B Pathway Commons Protein-Protein Interactions 1.0 null Perturb_7867_KD_RNaseH2A_SRP252761 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -1.31245 GTEX-NL3H-0011-R5a-SM-2I3GB GTEx Tissue Sample Gene Expression Profiles -1.0 -0.878691 ovary cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.064353 EGR1-20690147-ERYTHROLEUKEMIA-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null BL1734 (TBL1XR1) NURSA Protein Complexes 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-CC-A7II-01A-11R-A33J-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null embryoday9.5 BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 1.02885 Adrenocortical carcinoma_ACC_TCGA-OR-A5LD-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null anterior (rostral) cingulate (medial prefrontal) cortex_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.96421 pituitary GTEx Tissue Gene Expression Profiles 1.0 1.47607 GTEX-R55C-1426-SM-48FED GTEx Tissue Sample Gene Expression Profiles 1.0 0.909771 MARS Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_WI38_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null blast cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.067685 LARP4 Pathway Commons Protein-Protein Interactions 1.0 null rhombomere 10 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.07894 thalidomide-266 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-TML8-0001-SM-3NMAF GTEx Tissue Sample Gene Expression Profiles 1.0 0.848775 CCT5 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_SK-N-MC_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null CCNT2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null AIFM1 Pathway Commons Protein-Protein Interactions 1.0 null hexestrol-6252 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Lung squamous cell carcinoma_LUSC_TCGA-60-2714-01A-01R-0851-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K27ac_testis_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null SREBF2 JASPAR Predicted Transcription Factor Targets 1.0 null LRRC59 Pathway Commons Protein-Protein Interactions 1.0 null TAF1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null 17210682-SuppTable2 GeneSigDB Published Gene Signatures 1.0 null RUNX1_KO_GDS1511_251_mouse_Embryos at E12 GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null SNRNP200 Pathway Commons Protein-Protein Interactions 1.0 null Prestwick-857-3016 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null disease of cellular proliferation DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.251366 NCI-H650 GDSC Cell Line Gene Expression Profiles -1.0 -1.87597 STAT4-19710469-TH1 cell mouse-mouse ChEA Transcription Factor Binding Site Profiles 1.0 null CHD4 ENCODE Transcription Factor Targets 1.0 null pimethixene-2395 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null eGFP-NR4A1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_bone marrow_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-X4XX-0626-SM-3NMC1 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.43169 MAFK_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null NR2C2 ENCODE Transcription Factor Targets 1.0 null H3K4me3_placenta_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XYKS-0926-SM-4BRVG GTEx Tissue Sample Gene Expression Profiles 1.0 0.867477 RRS1 Pathway Commons Protein-Protein Interactions 1.0 null SRP9 Pathway Commons Protein-Protein Interactions 1.0 null RPS7 Pathway Commons Protein-Protein Interactions 1.0 null Frontal pole, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.98085 amygdaloid complex_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.72492 GTEX-WL46-0126-SM-3TW8I GTEx Tissue Sample Gene Expression Profiles 1.0 1.02837 NCI-H1869 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.825101 Kidney renal clear cell carcinoma_KIRC_TCGA-AK-3451-01A-02R-1188-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2AphosphoS2_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null mantle zone of r6Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.07461 PRKACA_knockout_266_GSE20984 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -2.62872 primary motor cortex (area M1, area 4)_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.971414 wortmannin-5240 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null HDAC2 ENCODE Transcription Factor Targets 1.0 null H3K4me3_endothelial cell of umbilical vein_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-WFG8-1826-SM-4LVM4 GTEx Tissue Sample Gene Expression Profiles 1.0 1.00234 TSPAN10 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-QMR6-1426-SM-32PLA GTEx Tissue Sample Gene Expression Profiles 1.0 0.845523 GTEX-XMK1-0126-SM-4B65F GTEx Tissue Sample Gene Expression Profiles 1.0 1.01792 POLR2A_K562_hg19_7 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-UJMC-0005-SM-3GACU GTEx Tissue Sample Gene Expression Profiles -1.0 -0.944804 sensory system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.050282 pinacidil-7437 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null MXI1_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null sodium phenylbutyrate-407 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null ETS1 ENCODE Transcription Factor Targets 1.0 null HEL Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.40331 GTEX-NFK9-2226-SM-3MJGP GTEx Tissue Sample Gene Expression Profiles 1.0 1.10087 HDAC6_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TCC-PAN2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.956675 SMG7 Pathway Commons Protein-Protein Interactions 1.0 null DETROIT 562 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.885454 POLR2A_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H2AFZ ENCODE Transcription Factor Targets 1.0 null Anterior olfactory nucleus, dorsal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.72812 Prostate adenocarcinoma_PRAD_TCGA-HC-7742-01A-11R-2118-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cerebellar cortex_8 yrs_M_12981 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.84015 NAT10 Pathway Commons Protein-Protein Interactions 1.0 null PF382 CCLE Cell Line Gene Expression Profiles -1.0 -1.50542 SNU601 CCLE Cell Line Gene CNV Profiles 1.0 1.38315 MAX_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null plastid part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.047472 H3K4me1_osteoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K9ac_HeLa-S3_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Kidney Chromophobe_KICH_TCGA-KN-8426-01A-11R-2315-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null tetracycline-6233 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null USF1 ENCODE Transcription Factor Targets 1.0 null GTEX-S341-0006-SM-3NM8D GTEx Tissue Sample Gene Expression Profiles -1.0 -1.36749 eye and adnexa disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.052302 GTEX-S4Q7-0006-SM-3K2AT GTEx Tissue Sample Gene Expression Profiles -1.0 -1.52705 Cochlear nucleus, subpedunclular granular region Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.23291 CTCF_G1E-ER4_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WOFL-0006-SM-3TW8K GTEx Tissue Sample Gene Expression Profiles -1.0 -1.13841 Kdm1a_KD_GDS5055_275_mouse_3T3-L1 preadipocytes - 48h GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null tracazolate-7339 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H2AK5ac_H9 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null genistein-267 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null TAF1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null inferolateral temporal cortex (area TEv, area 20)_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.39158 GTEX-P4QT-1626-SM-2S1NP GTEx Tissue Sample Gene Expression Profiles -1.0 -1.06675 H3K4me3_liver_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_HeLa-S3_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null tolnaftate-4805 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-BC-A69H-01A-11R-A311-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_fibroblast of pulmonary artery_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null lidoflazine-6278 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-Q2AG-0826-SM-2HMKF GTEx Tissue Sample Gene Expression Profiles 1.0 0.838093 MAX_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Pontine reticular nucleus, caudal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.02383 orbital frontal cortex_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.983809 Dorsal peduncular area, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.45635 mefenamic acid-5534 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-Q2AH-1926-SM-2S1PN GTEx Tissue Sample Gene Expression Profiles 1.0 0.985556 r10 basal plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.29965 H3K4me3_ES-E14_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null POLR2AphosphoS5_SK-N-MC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-34-A5IX-01A-12R-A27Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-WFON-0005-SM-3NMC9 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.1525 TRMT61A Pathway Commons Protein-Protein Interactions 1.0 null posterior (caudal) superior temporal cortex (area 22c)_8 pcw_M_13058 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.88395 monorden-836 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null RPL26L1 Pathway Commons Protein-Protein Interactions 1.0 null Lymphoma_burkitts(Raji) BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 1.85204 CTCF_CH12.LX_mm9_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null pyrimethamine-1894 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null novobiocin-342 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null oxidoreductase activity GO Molecular Function Annotations 2015 1.0 null CTCF_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TUBB Pathway Commons Protein-Protein Interactions 1.0 null CTCF_retinal pigment epithelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-86-8359-01A-11R-2326-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null limbic system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null dorsolateral prefrontal cortex_16 pcw_M_12287 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.970621 CTCF_fibroblast of mammary gland_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null inferior colliculus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.16136 butacaine-6225 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-BF-A5ER-01A-12R-A27Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null KASUMI-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.15924 POLR2AphosphoS5_GM12892_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null TBP_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null YY1_K562_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null SNU-216 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.37606 Lung adenocarcinoma_LUAD_TCGA-38-4625-01A-01R-1206-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Pyrroline hydroxycarboxylic acid HMDB Metabolites of Enzymes 1.0 null choroid plexus of the lateral ventricle Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.985576 BCL3 ENCODE Transcription Factor Targets 1.0 null r4 part of descending trigeminal sensory nucleus, oral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.39643 Taenia tecta, dorsal part, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.29574 GTEX-S4Z8-0006-SM-3K2AQ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.22611 CTCF_fibroblast of the aortic adventitia_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Prenatal Exposure Delayed Effects CTD Gene-Disease Associations 1.0 1.39394 pineal body Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.08792 GTEX-U4B1-1626-SM-3DB8N GTEx Tissue Sample Gene Expression Profiles -1.0 -1.2091 H2AFZ_mammary epithelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Accessory olfactory bulb, granular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.03715 GTEX-XGQ4-0005-SM-4AT5U GTEx Tissue Sample Gene Expression Profiles -1.0 -1.83004 Tuberomammillary nucleus, ventral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.01805 Acute Myeloid Leukemia_LAML_TCGA-AB-3007-03A-01T-0736-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SCH GDSC Cell Line Gene Expression Profiles -1.0 -1.53878 GTEX-VUSG-1426-SM-3GIJN GTEx Tissue Sample Gene Expression Profiles -1.0 -1.2876 NRF1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null eye TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.05997 colon TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.283899 fusiform gyrus, right, bank of cos Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.93773 Orbital area, medial part, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.72081 RUNX1-21571218-MEGAKARYOCYTES-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null H3K4me3_B cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null POLR2AphosphoS5_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RPS29 Pathway Commons Protein-Protein Interactions 1.0 null PPM1G Pathway Commons Protein-Protein Interactions 1.0 null CTCF_BJ_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K56ac_IMR90 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Pyrroline-5-carboxylate reductase, catalytic, N-terminal InterPro Predicted Protein Domain Annotations 1.0 null H3K4me1_endothelial cell of umbilical vein_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null EGR1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null cerebellar cortex_17 pcw_F_12880 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.06527 digestive gland TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.38665 C2BBE1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.850774 KLE Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.05936 Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5107-01A-01R-1420-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCIH2066 CCLE Cell Line Gene CNV Profiles 1.0 1.69259 H2BK15ac_H1 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null NCI-H1650 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.880398 hemicholinium-6739 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-UJMC-0326-SM-3GAE2 GTEx Tissue Sample Gene Expression Profiles 1.0 0.893045 Brain Lower Grade Glioma_LGG_TCGA-FG-A4MT-01A-11R-A26U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null troglitazone-1012 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null iPS-18 Cells Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles -1.0 -1.15429 H3K4me1_MEL cell line_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XBED-2626-SM-4E3J5 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.12776 WRNIP1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ELK4 ENCODE Transcription Factor Targets 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-A3-3346-01A-01R-1766-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_A549_hg19_9 ENCODE Transcription Factor Binding Site Profiles 1.0 null RBBP5_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_keratinocyte_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null E2F6_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SNU216 CCLE Cell Line Gene CNV Profiles 1.0 1.55754 hsa-miR-3670 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.20993 HCC12 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.846548 BC-3 COSMIC Cell Line Gene Mutation Profiles 1.0 null GTEX-R55E-0726-SM-48FCZ GTEx Tissue Sample Gene Expression Profiles 1.0 1.21457 BCAS2 Pathway Commons Protein-Protein Interactions 1.0 null H2AFZ_myotube_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CPT1A Pathway Commons Protein-Protein Interactions 1.0 null periventricular stratum of r3Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.02548 HCC202 CCLE Cell Line Gene Expression Profiles 1.0 1.48204 H3K4me3_B cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XUJ4-2626-SM-4BOQ3 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.64881 r9 part of gigantocellular reticular area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.86343 dicoumarol-3848 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Brain Lower Grade Glioma_LGG_TCGA-DU-A7TC-01A-21R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null KPNA2 Pathway Commons Protein-Protein Interactions 1.0 null exocrine gland TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.259929 SIN3A_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_brown adipose tissue_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null CA4 field, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.79087 CHD2_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-55-1596-01A-01R-0946-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NR2C2_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null sirolimus_mus musculus_gpl1261_gse5332 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null NCI-H1770 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -2.27046 CTCF_kidney_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null pyramidal layer of rostral subiculum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.35184 H3K4me3_MEL cell line_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null whole body TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.010434 NR2F2 ENCODE Transcription Factor Targets 1.0 null VIIAf Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.922552 hsa-let-7b-5p MiRTarBase microRNA Targets 1.0 null CCT8 Pathway Commons Protein-Protein Interactions 1.0 null CTCF_fibroblast of skin of abdomen_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null A-673 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.27704 hycanthone-4630 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H3K4me2_GM12878_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XPVG-2226-SM-4B65U GTEx Tissue Sample Gene Expression Profiles 1.0 1.07573 Pyrroline-5-carboxylate reductase, dimerisation domain InterPro Predicted Protein Domain Annotations 1.0 null NCI-H2795 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.27704 CTCF_GM12864_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-QLQ7-1726-SM-2S1QQ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.17067 Liver hepatocellular carcinoma_LIHC_TCGA-O8-A75V-01A-11R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-O5YV-1126-SM-3LK73 GTEx Tissue Sample Gene Expression Profiles 1.0 1.41332 Mediodorsal nucleus of the thalamus, lateral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.02078 EFM-19 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.10831 ChIP_ZFX_18555785 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null POLR2AphosphoS5_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAFK ENCODE Transcription Factor Targets 1.0 null Infralimbic area, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.45873 tretinoin-1211 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null striatum_16 pcw_M_12879 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.94689 POLR2A_GM19099_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null 15-delta prostaglandin J2-1231 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Perturb_7943_KO_MED12_SRP201365 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -5.5473 GLRX3 Pathway Commons Protein-Protein Interactions 1.0 null HCC1806 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.86097 SNU-175 COSMIC Cell Line Gene Mutation Profiles 1.0 null ZFX-18555785-MESC-mouse ChEA Transcription Factor Binding Site Profiles 1.0 null BL446 (UBE3A) NURSA Protein Complexes 1.0 null GTEX-QDT8-0011-R3A-SM-32PKR GTEx Tissue Sample Gene Expression Profiles 1.0 0.90845 IV, left, lateral hemisphere Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.03592 fasudil-436 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null MYC_K562_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null para-abducens nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.70297 KLF1 ChEA Transcription Factor Targets 1.0 null E2F1-18555785-MESC-mouse ChEA Transcription Factor Binding Site Profiles 1.0 null amygdaloid complex_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.76875 JJN-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.894509 CDC5L Pathway Commons Protein-Protein Interactions 1.0 null telencephalon TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null mediodorsal nucleus of thalamus_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.76277 SP1_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null MRPS28 Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_H54_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-QEG5-0826-SM-2I5GF GTEx Tissue Sample Gene Expression Profiles 1.0 0.957183 WDR6 Pathway Commons Protein-Protein Interactions 1.0 null intracellular organelle part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.040417 GTEX-S95S-1426-SM-2XCDM GTEx Tissue Sample Gene Expression Profiles -1.0 -0.999259 TBP_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_MEL cell line_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null plicamycin_homo sapiens_gpl570_gse25127 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null r10 part of gigantocellular reticular area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 3.2237 RERF-GC-1B Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.98293 CCT6A Pathway Commons Protein-Protein Interactions 1.0 null Orbital area, medial part, layer 6a Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.09019 CTCF_MCF-7_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_small intestine_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_GM12864_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null PA-TU-8988S Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles 1.0 null PTRH2 Pathway Commons Protein-Protein Interactions 1.0 null inner CP in dorsomedial parietal cortex (area 7m) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.84823 Bladder Urothelial Carcinoma_BLCA_TCGA-GD-A6C6-01A-21R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NB14 GDSC Cell Line Gene Expression Profiles -1.0 -1.48519 GTEX-QEL4-0626-SM-3GIJM GTEx Tissue Sample Gene Expression Profiles -1.0 -1.86675 H3K4me1_bone marrow_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-S4Q7-1526-SM-3K2AG GTEx Tissue Sample Gene Expression Profiles -1.0 -1.01769 primary somatosensory cortex (area S1, areas 3,1,2)_10 mos_M_12977 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.885491 BT-483 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.03785 EIF3D Pathway Commons Protein-Protein Interactions 1.0 null H3K79me2_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null diethylstilbestrol_rattus norvegicus_gpl1355_brown norway_gds2913 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-X585-0011-R1B-SM-46MVE GTEx Tissue Sample Gene Expression Profiles 1.0 1.02752 SKIV2L2 Pathway Commons Protein-Protein Interactions 1.0 null MYC_MCF 10A_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null OPM1 CCLE Cell Line Gene CNV Profiles -1.0 -1.69738 POU2F2_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H1882 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.55084 TCF12_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null UTP14A Pathway Commons Protein-Protein Interactions 1.0 null MDAMB453 CCLE Cell Line Gene Expression Profiles 1.0 2.00164 CHRNB4_Deficiency_GDS2309_714_mouse_Brain GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null SARS-CoV_96Hour_23935999_GSE47962 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -2.33562 Sarcoma_SARC_TCGA-FX-A48G-01A-11R-A24X-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null EJM Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.39986 NB12 GDSC Cell Line Gene Expression Profiles -1.0 -1.69078 NR2F2_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null MRPS16 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-T8EM-1326-SM-3DB7G GTEx Tissue Sample Gene Expression Profiles -1.0 -0.97094 CHD2_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K9ac_Breast Myoepithelial Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null muscular system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.071831 PHF8 ENCODE Transcription Factor Targets 1.0 null Prostate adenocarcinoma_PRAD_TCGA-FC-A4JI-01A-11R-A250-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2AphosphoS5_endothelial cell of umbilical vein_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null EP300_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-2Z-A9J3-01A-12R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ETV1_01_161 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.62366 female reproductive system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.212413 GTEX-XBEC-0006-SM-4AT5T GTEx Tissue Sample Gene Expression Profiles -1.0 -1.17732 IFI16 Pathway Commons Protein-Protein Interactions 1.0 null WDR26 Pathway Commons Protein-Protein Interactions 1.0 null connective tissue TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.316951 H3K27ac_osteoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-QXCU-1726-SM-2TC6L GTEx Tissue Sample Gene Expression Profiles -1.0 -1.09076 Mediodorsal nucleus of thalamus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.02269 penbutolol-7476 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null RPS26 Pathway Commons Protein-Protein Interactions 1.0 null ZC3H11A_ES-E14_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5462-01A-01R-1503-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null III, right, paravermis Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.33128 RPS8 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-RVPU-0005-SM-2TF6L GTEx Tissue Sample Gene Expression Profiles -1.0 -1.86368 H3K4me1_liver_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null H3K9ac_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null MAX_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H1975 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.19754 RPL23A Pathway Commons Protein-Protein Interactions 1.0 null TRMT6 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_cerebellum_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null fallopian tube HPA Tissue Gene Expression Profiles 1.0 0.99556 COPS4 Pathway Commons Protein-Protein Interactions 1.0 null V, left, lateral hemisphere Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.858647 GTEX-X62O-0005-SM-46MV1 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.11978 POLR2A_embryonic fibroblast_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4881-01A-01R-1305-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-XBEW-0126-SM-4AT66 GTEx Tissue Sample Gene Expression Profiles 1.0 1.10643 cerebral cortex TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null r7 part of cochlear column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.13337 RELA_GM10847_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_HCT116_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null PRPF3 Pathway Commons Protein-Protein Interactions 1.0 null POLR2E Pathway Commons Protein-Protein Interactions 1.0 null amygdala TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null brain TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null morantel-1798 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H3K4me3_erythroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null RAD21_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_iPS DF 19.11 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Anterior cingulate area, dorsal part, layer 5 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.41155 CTCF_HeLa-S3_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Uterine Carcinosarcoma_UCS_TCGA-N7-A4Y0-01A-12R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K23ac_H9 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null protriptyline-6338 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null mantle zone of r10Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.04779 metformin-1694 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-R55G-0006-SM-2TC6O GTEx Tissue Sample Gene Expression Profiles -1.0 -2.24524 H3K9ac_ES-E14_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null ursolic acid-7181 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null ivermectin-2051 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null methocarbamol-2274 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null EIF4B Pathway Commons Protein-Protein Interactions 1.0 null CTCF_HeLa-S3_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null CREB1_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null macromolecular complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.040876 TEAD4_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WH7G-0002-SM-4LVN9 GTEx Tissue Sample Gene Expression Profiles 1.0 0.930776 PSMA6 Pathway Commons Protein-Protein Interactions 1.0 null hsa-miR-3907 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.55165 Pancreatic adenocarcinoma_PAAD_TCGA-3A-A9I5-01A-11R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null endometrium_8b HPA Tissue Sample Gene Expression Profiles -1.0 -1.32035 OCI-AML5 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.42021 sulfinpyrazone-6230 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Uterine Carcinosarcoma_UCS_TCGA-N7-A4Y8-01A-11R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2AphosphoS5_SK-N-MC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null other source TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.06343 FOXP1-21924763-HESC-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null YY1_SK-N-SH_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null intracellular organelle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.156513 Brain Lower Grade Glioma_LGG_TCGA-HT-A74O-01A-11R-A32Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null primary somatosensory cortex (area S1, areas 3,1,2)_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.20502 benzethonium chloride-7207 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null layer 2 of FCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.87324 mantle zone of r11Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.34361 H3K9ac_K562_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-FS-A4F4-06A-12R-A266-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HCC1569 CCLE Cell Line Gene Expression Profiles 1.0 1.46179 IMPDH2 Pathway Commons Protein-Protein Interactions 1.0 null metitepine-5413 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null anterior olfactory area, dorsal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.71294 nb4 HPA Cell Line Gene Expression Profiles -1.0 -1.0328 PRKCDBP Pathway Commons Protein-Protein Interactions 1.0 null methoxsalen-5007 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null HCC2157 CCLE Cell Line Gene Expression Profiles 1.0 2.42177 mantle zone of PalSe Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.08133 anterior (rostral) cingulate (medial prefrontal) cortex_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.94875 CTCF_cerebellum_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H650 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.37939 CUL9 Pathway Commons Protein-Protein Interactions 1.0 null CTCF_fibroblast of lung_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney Diseases CTD Gene-Disease Associations 1.0 1.38641 H3K4me3_fibroblast of lung_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-R55C-0005-SM-3GAE9 GTEx Tissue Sample Gene Expression Profiles -1.0 -2.42057 TUBA4A Pathway Commons Protein-Protein Interactions 1.0 null Perturb_3957_Mut_GSDMB_SRP350967 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -10.2435 POLR2AphosphoS5_HCT116_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-P44H-0426-SM-2XCEZ GTEx Tissue Sample Gene Expression Profiles -1.0 -0.88431 Perturb_17412_KO_Kat7_SRP346205 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 17.1785 NFYA ENCODE Transcription Factor Targets 1.0 null doxycycline-7195 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null ZNF143_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H2804 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.45931 Bladder Urothelial Carcinoma_BLCA_TCGA-XF-A8HF-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null primary auditory cortex (core)_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.6002 MAX_A549_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-77-8143-01A-11R-2247-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Diagonal band nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.12758 amygdaloid complex_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.964479 DU4475 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.18063 GTEX-WK11-2526-SM-3NM9Y GTEx Tissue Sample Gene Expression Profiles -1.0 -1.03839 Anterior cingulate area, dorsal part, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.38112 ANXA2 Pathway Commons Protein-Protein Interactions 1.0 null H3K9ac_A549_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null HMT-3522 cell ProteomicsDB Cell Type and Tissue Protein Expression Profiles 1.0 1.42517 ZNF384_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null KDM1A ENCODE Transcription Factor Targets 1.0 null TBL1XR1 ENCODE Transcription Factor Targets 1.0 null GTEX-XUJ4-0005-SM-4BOQ6 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.13194 RPL4 Pathway Commons Protein-Protein Interactions 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A6JZ-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null EBF1 ENCODE Transcription Factor Targets 1.0 null GTEX-Q2AI-1126-SM-48U19 GTEx Tissue Sample Gene Expression Profiles 1.0 2.19463 MICU1 Pathway Commons Protein-Protein Interactions 1.0 null sodium phenylbutyrate-434 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-XOTO-2826-SM-4B65I GTEx Tissue Sample Gene Expression Profiles 1.0 1.73403 nucleus LOCATE Predicted Protein Localization Annotations 1.0 null binding GO Molecular Function Annotations 2015 1.0 null GTEX-R3RS-0005-SM-3GAEH GTEx Tissue Sample Gene Expression Profiles -1.0 -1.02328 PRKAG2 Pathway Commons Protein-Protein Interactions 1.0 null semitendinosus TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.679025 FGFBP1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-XOT4-0526-SM-4B66O GTEx Tissue Sample Gene Expression Profiles -1.0 -0.956842 H3K4me1_NT2-D1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null SK-CO-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.899993 GTEX-UPJH-0526-SM-4IHK8 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.902611 Accessory facial motor nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.48116 RPS25 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-S95S-0005-SM-2XCEC GTEx Tissue Sample Gene Expression Profiles -1.0 -1.36231 H3K27ac_heart_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null HNRNPH1 Pathway Commons Protein-Protein Interactions 1.0 null mediodorsal nucleus of thalamus_16 pcw_M_12287 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.884906 Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7JS-01A-11R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cho-k1 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.41087 HCC1187 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.15456 BJAB Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.11964 monensin-3443 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null HSF1_KD_GDS1733_754_human_HeLa cells - 0 Hour by siHSF1_2 GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null Prostate adenocarcinoma_PRAD_TCGA-QU-A6IL-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SG in granular insular cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.12883 Prostate adenocarcinoma_PRAD_TCGA-KK-A7B0-01A-11R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2861-03A-01T-0736-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null lateral part of r5B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.07807 Pancreatic adenocarcinoma_PAAD_TCGA-HZ-7289-01A-11R-2156-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_myocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_mammary epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_fibroblast of gingiva_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Perturb_14397_KD_XPR1_SRP347870 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -1.38873 NONO Pathway Commons Protein-Protein Interactions 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-LP-A4AW-01A-11R-A24H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null FOS_MCF 10A_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MYOD1_myocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null anterior (rostral) cingulate (medial prefrontal) cortex_37 yrs_M_12303 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -2.35222 mediodorsal nucleus of thalamus_4 mos_M_12890 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.27428 KMH2 CCLE Cell Line Gene Expression Profiles -1.0 -1.70243 ZMIZ1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_H1 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null MAX_SK-N-SH_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null UACC-812 GDSC Cell Line Gene Expression Profiles 1.0 1.49016 POLR2A_kidney_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null IGF1_OE_GDS3484_540_human_MCF-7 GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null H3K27ac_embryonic fibroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null fallopiantube_8c HPA Tissue Sample Gene Expression Profiles 1.0 1.5162 ZFX ChEA Transcription Factor Targets 1.0 null cerebellar cortex_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.88145 orbital frontal cortex_4 mos_M_12890 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.846582 CTCF_kidney_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SP2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PA-TU-8988T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles 1.0 null H3K4me3_HCT116_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null EEF1G Pathway Commons Protein-Protein Interactions 1.0 null tissues, cell types and enzyme sources TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.53602 PTPLAD1 Pathway Commons Protein-Protein Interactions 1.0 null MAX_SK-N-SH_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2AphosphoS2_myocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_3773_KD_CCNK_SRP041162 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 OB outer plexiform layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.27336 PSMB5 Pathway Commons Protein-Protein Interactions 1.0 null HA-E2F1_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null FUOV1 CCLE Cell Line Gene Expression Profiles 1.0 1.86387 NELFE ENCODE Transcription Factor Targets 1.0 null Lung adenocarcinoma_LUAD_TCGA-05-5420-01A-01R-1628-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null alpha-estradiol-5207 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null E2F6_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-PX3G-0008-SM-48U2L GTEx Tissue Sample Gene Expression Profiles 1.0 1.68362 GTEX-R53T-0926-SM-3GADH GTEx Tissue Sample Gene Expression Profiles -1.0 -1.0231 hippocampus (hippocampal formation)_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.02532 GTEX-Y8E5-0006-SM-47JWQ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.38138 UACC812 CCLE Cell Line Gene Expression Profiles 1.0 1.60935 Sarcoma_SARC_TCGA-QC-A7B5-01A-11R-A33J-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PML_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_HEK293_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null 6-benzylaminopurine-3623 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H3K4me3_keratinocyte_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null PRC2_SUZ12_UP.V1 MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations 1.0 null GTEX-OIZH-2626-SM-2HMJM GTEx Tissue Sample Gene Expression Profiles 1.0 1.37065 H3K4me3_fibroblast of the aortic adventitia_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null r5 part of the oral Sp5 subnucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.02548 AMO-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.71932 dorsolateral prefrontal cortex_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 2.40214 MEG-01 COSMIC Cell Line Gene CNV Profiles 1.0 2.41451 HCFC1_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H1770 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.938833 cell type cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.253479 DDX50 Pathway Commons Protein-Protein Interactions 1.0 null embryoday7.5 BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 1.68509 dorsolateral prefrontal cortex_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.888461 superficial stratum of r8Lim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.10953 H3K4me3_HL-60_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null HK2 CCLE Cell Line Gene Expression Profiles -1.0 -2.31881 NCI-H820 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.30057 Median preoptic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.02844 CD3EAP Pathway Commons Protein-Protein Interactions 1.0 null organic acid metabolic process GO Biological Process Annotations 2015 1.0 null NB4 CCLE Cell Line Gene CNV Profiles -1.0 -1.8361 CPSF1 Pathway Commons Protein-Protein Interactions 1.0 null NCL Pathway Commons Protein-Protein Interactions 1.0 null MARK2 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_foreskin fibroblast_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null CTCF_GM12891_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_bone marrow macrophage_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RBM14 Pathway Commons Protein-Protein Interactions 1.0 null central glial substance Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.60747 H3K9me1_keratinocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-VUSG-2626-SM-4KKZI GTEx Tissue Sample Gene Expression Profiles -1.0 -1.27077 GTEX-X4EO-0006-SM-3P5ZF GTEx Tissue Sample Gene Expression Profiles -1.0 -0.99599 H3K4me2_fibroblast of dermis_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null central nervous system TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.0758 GTEX-T8EM-0226-SM-3DB7C GTEx Tissue Sample Gene Expression Profiles 1.0 1.29405 KU812 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.56286 HCC3153 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 1.81193 PANC0813 CCLE Cell Line Gene Expression Profiles 1.0 2.57532 propranolol_mus musculus_gpl6885_gse42534 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me1_HepG2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-WRHU-0826-SM-3MJFN GTEx Tissue Sample Gene Expression Profiles -1.0 -1.14803 NFYA_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_7726_KO_MED12_SRP201365 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -4.47697 Fetal_Intestine_Large Roadmap Epigenomics Cell and Tissue Gene Expression Profiles -1.0 -0.943082 POLR2AphosphoS2_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MDA-MB-468 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.13643 Simple lobule, molecular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.02897 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5185-01A-01R-1426-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_fibroblast of pulmonary artery_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null diethylstilbestrol_mus musculus_gpl6887_gse37969 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null PNPLA6 Pathway Commons Protein-Protein Interactions 1.0 null ME-180 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.05936 Brain Lower Grade Glioma_LGG_TCGA-HT-A616-01A-11R-A29R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null OCI-M1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.836023 GTEX-POMQ-1926-SM-3NB1Y GTEx Tissue Sample Gene Expression Profiles -1.0 -1.2474 KHSRP Pathway Commons Protein-Protein Interactions 1.0 null HNRNPM Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_cardiac mesoderm_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null r10 part of the trigeminal column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.04953 H3K27ac_HCT116_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-2Y-A9H1-01A-11R-A38B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null DHX16 Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_IMR-90_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RPS15 Pathway Commons Protein-Protein Interactions 1.0 null midbrain reticular formation, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.971617 hippocampus (hippocampal formation)_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.09065 metolazone-1514 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Prestwick-642-2160 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-XBED-0006-SM-47JXO GTEx Tissue Sample Gene Expression Profiles -1.0 -1.02246 POLR2AphosphoS5_GM12891_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null AKT2_knockdown_44_GSE12291 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations 1.0 1.59573 GTEX-XQ3S-2526-SM-4BOOG GTEx Tissue Sample Gene Expression Profiles 1.0 1.59216 BRAF_druginhibition_38_GDS5085 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -1.30028 GTEX-WWYW-0426-SM-3NB31 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.74992 GTEX-X5EB-2026-SM-4E3KA GTEx Tissue Sample Gene Expression Profiles 1.0 0.887795 iopromide-2739 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null DDX1 Pathway Commons Protein-Protein Interactions 1.0 null prednisone-1478 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Pancreas Roadmap Epigenomics Cell and Tissue Gene Expression Profiles 1.0 1.34352 skeletalmuscle_a HPA Tissue Sample Gene Expression Profiles -1.0 -1.46751 periventricular nucleus, preoptic portion Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -2.06198 LY-294002-6995 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null RTCA Pathway Commons Protein-Protein Interactions 1.0 null GTEX-WVLH-3026-SM-3MJG9 GTEx Tissue Sample Gene Expression Profiles 1.0 1.84947 Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-7056-01A-11R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-WRHK-0005-SM-3MJF5 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.870308 CCT7 Pathway Commons Protein-Protein Interactions 1.0 null Brain Lower Grade Glioma_LGG_TCGA-DU-7304-02A-12R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null trifluoperazine-1004 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null HBS1L Pathway Commons Protein-Protein Interactions 1.0 null dactinomycin_mus musculus_gpl6246_gse21233 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me3_WI38_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null CTCF_foreskin fibroblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null carbamazepine-5518 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H3K27ac_olfactory bulb_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-ZS-A9CD-01A-11R-A37K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null DDX23 Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_olfactory bulb_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null USF2_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_thymus_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-U3ZN-0008-SM-4DXTL GTEx Tissue Sample Gene Expression Profiles 1.0 0.901572 POLR2AphosphoS5_HL-60_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null RUNX3_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H2AFZ_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CHD2 ENCODE Transcription Factor Targets 1.0 null GTEX-U412-0326-SM-3DB9L GTEx Tissue Sample Gene Expression Profiles -1.0 -1.12871 diloxanide-5025 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null 1-Pyrroline-5-carboxylic acid HMDB Metabolites of Enzymes 1.0 null mantle zone of OB Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.13762 H3K4me1_H9 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-D3-A51K-06A-11R-A266-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SMC3_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lateral reticular nucleus, parvicellular part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 3.85246 H3K4me2_CH12.LX_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null CTCF_MCF-7_hg19_6 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-S4P3-0006-SM-3K2AW GTEx Tissue Sample Gene Expression Profiles -1.0 -2.44219 erythroid cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.177033 NCIH929 CCLE Cell Line Gene CNV Profiles -1.0 -2.21613 H3K4me1_olfactory bulb_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null dorsolateral prefrontal cortex_19 pcw_F_12885 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.08069 H3K79me2_endothelial cell of umbilical vein_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-OXRL-2626-SM-2I3F1 GTEx Tissue Sample Gene Expression Profiles 1.0 1.16607 GTEX-XLM4-3126-SM-4AT6M GTEx Tissue Sample Gene Expression Profiles 1.0 0.857075 NCI-H929 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.894634 POLR2A_MEL cell line_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_GM12892_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-S95S-1026-SM-4B64M GTEx Tissue Sample Gene Expression Profiles 1.0 1.11305 SNU-1040 COSMIC Cell Line Gene Mutation Profiles 1.0 null GTEX-QVJO-0006-SM-2S1RC GTEx Tissue Sample Gene Expression Profiles -1.0 -2.3922 alpha-amino acid biosynthetic process GO Biological Process Annotations 2015 1.0 null GTEX-W5WG-1126-SM-4LMK4 GTEx Tissue Sample Gene Expression Profiles 1.0 0.941252 GTEX-WFG7-0008-SM-4LMKB GTEx Tissue Sample Gene Expression Profiles 1.0 0.862867 GTEX-WEY5-0006-SM-3GIKG GTEx Tissue Sample Gene Expression Profiles -1.0 -2.39605 CTCF_spleen_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_937_KD_Smndc1_SRP337256 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 5.44571 USP39 Pathway Commons Protein-Protein Interactions 1.0 null Lung adenocarcinoma_LUAD_TCGA-55-8616-01A-11R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-WFON-0326-SM-3GIKX GTEx Tissue Sample Gene Expression Profiles -1.0 -0.943142 halcinonide-6040 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null 2313287 CCLE Cell Line Gene CNV Profiles 1.0 1.49119 lateral septal nucleus, intermediate part, periventricular Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.35277 21205295-TableS1 GeneSigDB Published Gene Signatures 1.0 null hamstring muscle TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.42649 H3K4me3_G1E_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null H3K27ac_A549_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-T2IS-3026-SM-32QPM GTEx Tissue Sample Gene Expression Profiles 1.0 1.53842 IGF2BP3 Pathway Commons Protein-Protein Interactions 1.0 null Anterodorsal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.28795 ZBTB7A_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null JUND_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_WERI-Rb-1_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null tcof1_15522210_neuroblastoma_gof_mouse_gpl339_gds998 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations -1.0 -0.041046 STAT1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null K-562 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -2.26805 GTEX-RNOR-2326-SM-2TF4I GTEx Tissue Sample Gene Expression Profiles 1.0 1.10356 OVCA 432 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.894509 Liver hepatocellular carcinoma_LIHC_TCGA-CC-5259-01A-31R-A213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ELAVL1 Pathway Commons Protein-Protein Interactions 1.0 null caudal group of intralaminar nuclei, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.0121 HNRNPL Pathway Commons Protein-Protein Interactions 1.0 null YY1_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_H1-hESC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-WCDI-0008-SM-47JYE GTEx Tissue Sample Gene Expression Profiles 1.0 1.25924 anterior cortical nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.12484 H3K9ac_myotube_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-S4P3-1626-SM-3K2AZ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.1948 GTEX-PWOO-0826-SM-48TCL GTEx Tissue Sample Gene Expression Profiles 1.0 1.59448 KDM1A_KD_GDS5055_457_mouse_adipose tissue GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null Perturb_7608_KD_YY1_SRP237753 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -2.90146 RFX5_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TBP ENCODE Transcription Factor Targets 1.0 null RPS3A Pathway Commons Protein-Protein Interactions 1.0 null 0179445-0000-4289 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-RVPV-0008-SM-47JYW GTEx Tissue Sample Gene Expression Profiles 1.0 1.28546 superior colliculus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.06339 azaperone-3573 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null r3 part of cochlear sensory column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.66934 A3/KAW Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.846548 EXOSC4 Pathway Commons Protein-Protein Interactions 1.0 null ATP5C1 Pathway Commons Protein-Protein Interactions 1.0 null Caov-4 GDSC Cell Line Gene Expression Profiles -1.0 -1.45307 H3K4me3_bronchial epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-OIZH-2026-SM-3NB1M GTEx Tissue Sample Gene Expression Profiles 1.0 1.26574 lateral group of nuclei, right, dorsal division Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.30578 TUBB3 Pathway Commons Protein-Protein Interactions 1.0 null PPP2R2D Pathway Commons Protein-Protein Interactions 1.0 null Medial amygdalar nucleus, posteroventral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.32661 SP4_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null U-698-M Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.06612 NOP16 Pathway Commons Protein-Protein Interactions 1.0 null RPL10 Pathway Commons Protein-Protein Interactions 1.0 null extracellular matrix COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.181227 GTEX-OHPL-0006-SM-3MJHB GTEx Tissue Sample Gene Expression Profiles -1.0 -1.1005 MTA2 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-QCQG-0008-SM-48U2G GTEx Tissue Sample Gene Expression Profiles 1.0 1.30445 H3K79me2_myotube_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null mediodorsal nucleus of thalamus_19 yrs_F_12832 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.905967 GTEX-WZTO-0006-SM-3NM9T GTEx Tissue Sample Gene Expression Profiles -1.0 -1.11524 EIF3H Pathway Commons Protein-Protein Interactions 1.0 null SP1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MG-63 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.70089 CDKN2A Pathway Commons Protein-Protein Interactions 1.0 null EGR1 ENCODE Transcription Factor Targets 1.0 null GTEX-T5JC-0011-R10A-SM-32PM2 GTEx Tissue Sample Gene Expression Profiles 1.0 1.0178 GTEX-Q2AG-0011-R1A-SM-2HMJI GTEx Tissue Sample Gene Expression Profiles 1.0 1.7815 H4K5ac_IMR90 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null 4-hydroxyphenazone-1915 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null ZBTB7A_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SMC3_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null skimmianine-6242 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null primary motor-sensory cortex (samples)_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.969631 PSMA7 Pathway Commons Protein-Protein Interactions 1.0 null 20174566-TableS1 GeneSigDB Published Gene Signatures 1.0 null primary visual cortex (striate cortex, area V1/17)_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.30911 GTEX-SN8G-0526-SM-32PLE GTEx Tissue Sample Gene Expression Profiles -1.0 -1.02035 HNRNPA2B1 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_B cell_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null ZKSCAN1 ENCODE Transcription Factor Targets 1.0 null OCI-M2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.21407 ELK1 ENCODE Transcription Factor Targets 1.0 null TEAD4 ENCODE Transcription Factor Targets 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-B9-A44B-01A-11R-A24Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me1_heart_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-QLQ7-0005-SM-2S1QP GTEx Tissue Sample Gene Expression Profiles -1.0 -1.35273 HCFC1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null G3BP1 Pathway Commons Protein-Protein Interactions 1.0 null PK-8 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.27763 altretamine-5688 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null PPP1R10 Pathway Commons Protein-Protein Interactions 1.0 null CTCF_choroid plexus epithelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-PX3G-2626-SM-2I3EG GTEx Tissue Sample Gene Expression Profiles 1.0 1.51447 HCC2688 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.883338 H3K4me3_bone marrow macrophage_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null MAZ_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null nifuroxazide-4835 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null trichostatin A-6171 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null superficial stratum of r10Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.4185 Sarcoma_SARC_TCGA-DX-A7ET-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_mammary epithelial cell_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-66-2793-01A-01R-1201-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null EGR1 ChEA Transcription Factor Targets 1.0 null fenspiride-6001 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null CTCF_fibroblast of upper leg skin_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2AphosphoS5_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null cefuroxime-6261 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null CTCF_testis_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null organelle LOCATE Predicted Protein Localization Annotations 1.0 null primary visual cortex (striate cortex, area V1/17)_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.939215 GTEX-REY6-1726-SM-48FDL GTEx Tissue Sample Gene Expression Profiles 1.0 0.954677 H3K4me1_skeletal muscle myoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null SLC1A3 Pathway Commons Protein-Protein Interactions 1.0 null posteroventral (inferior) parietal cortex_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -2.0607 EWSR1 ChEA Transcription Factor Targets 1.0 null L-Proline DrugBank Drug Targets 1.0 null Pheochromocytoma and Paraganglioma_PCPG_TCGA-SR-A6MU-01A-11R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null mcf7 HPA Cell Line Gene Expression Profiles 1.0 1.38111 GTEX-P4QR-1026-SM-2I5GP GTEx Tissue Sample Gene Expression Profiles -1.0 -0.864409 intermediate stratum of r4BL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.6039 caudal division of IPC (area 39) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.3334 SOX17 JASPAR Predicted Transcription Factor Targets 1.0 null hsa-miR-4725-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.07142 MYC_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-X3Y1-0426-SM-3P5Z4 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.834524 Brain Lower Grade Glioma_LGG_TCGA-VM-A8CB-01A-11R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null mediodorsal nucleus of thalamus_15 yrs_M_12299 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.846608 Lung adenocarcinoma_LUAD_TCGA-NJ-A4YF-01A-12R-A262-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null F0447-0125-6429 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null E2F4_MCF 10A_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null single-organism cellular process GO Biological Process Annotations 2015 1.0 null COLO 680N Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.10551 GTEX-O5YT-0007-SM-32PK7 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.36986 rostral (anterior) extramural migratory stream Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.37729 CTCF_G1E_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null thorax TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.256902 HDAC6 ENCODE Transcription Factor Targets 1.0 null biological_process GO Biological Process Annotations 2015 1.0 null SMC3_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-RM2N-0006-SM-2TF5H GTEx Tissue Sample Gene Expression Profiles -1.0 -1.67723 Nervous System Diseases CTD Gene-Disease Associations 1.0 1.02708 H3K4me3_fibroblast of mammary gland_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null zomepirac-6815 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null SF3B4 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_endothelial cell of umbilical vein_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Prostate adenocarcinoma_PRAD_TCGA-FC-A6HD-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TBL1XR1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null posteroventral (inferior) parietal cortex_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.05163 CTCF_BE2C_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null 501A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.851316 TCFAP2C-20176728-TROPHOBLAST STEM CELLS-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null SLTM Pathway Commons Protein-Protein Interactions 1.0 null GTEX-RWS6-2126-SM-2XCAV GTEx Tissue Sample Gene Expression Profiles -1.0 -1.44455 Lung squamous cell carcinoma_LUSC_TCGA-52-7810-01A-11R-2125-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-22-4613-01A-01R-1443-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null 600MPE Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -0.968259 H3K4me3_MCF-7_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_MCF-7_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Rectum adenocarcinoma_READ_TCGA-DC-6155-01A-11R-1660-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null intermediate stratum of AOB Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.82828 18535662-TableS2d GeneSigDB Published Gene Signatures 1.0 null HCC1937 CCLE Cell Line Gene CNV Profiles 1.0 1.94776 LY-294002-6976 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H3K27ac_fibroblast of lung_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null nimesulide-7024 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me2_HepG2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null MYOG_myocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null cho cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.155051 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7421-01A-11R-2081-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Penis_Foreskin_Fibroblast_Primary_Cells_skin02 Roadmap Epigenomics Cell and Tissue Gene Expression Profiles 1.0 1.8163 GTEX-T6MN-0011-R1A-SM-32QOY GTEx Tissue Sample Gene Expression Profiles 1.0 1.21578 E2F4 ENCODE Transcription Factor Targets 1.0 null HCC38 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.57898 H3K4me1_lung_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null MTA3_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null animal TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.53602 RERF-LC-OK Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.3162 CTIP_DN.V1 MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations -1.0 null H3K4me3_G1E_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null CEBPB ENCODE Transcription Factor Targets 1.0 null MAX_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K79me2_skeletal muscle myoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Perturb_12755_KO_Abca1/Abcg1_SRP273079 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -8.16391 H3K4me2_mammary epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null CTCF_G1E-ER4_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-R55E-1326-SM-48FCR GTEx Tissue Sample Gene Expression Profiles 1.0 1.01763 GTEX-S4Q7-1026-SM-4AD75 GTEx Tissue Sample Gene Expression Profiles 1.0 1.65229 CTCF_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SIN3A_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null striatum_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.11344 Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4842-01A-02R-1420-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null DDX27 Pathway Commons Protein-Protein Interactions 1.0 null MRPS31 Pathway Commons Protein-Protein Interactions 1.0 null Anemia CTD Gene-Disease Associations 1.0 1.06225 intracellular organelle LOCATE Predicted Protein Localization Annotations 1.0 null r10 part of basomedial reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.03346 MC-IXC GDSC Cell Line Gene Expression Profiles -1.0 -1.43878 HCC1937 GDSC Cell Line Gene Expression Profiles 1.0 1.82916 E2F4_myocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me2_astrocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null protein complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.041038 GTEX-NL3H-0006-SM-2I3FW GTEx Tissue Sample Gene Expression Profiles -1.0 -1.44916 SK-MM-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.39662 superficial stratum of r1Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.28441 etidronic acid-4387 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null USF1_myocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null choroid TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.40328 CTCF_GM12871_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null head TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.0758 POU5F1-16518401-MESC-mouse ChEA Transcription Factor Binding Site Profiles 1.0 null RFX5_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RBM42 Pathway Commons Protein-Protein Interactions 1.0 null GM97 BioGPS Cell Line Gene Expression Profiles -1.0 -1.33374 mediodorsal nucleus of thalamus_1 yrs_F_12830 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.939849 hippocampus (hippocampal formation)_19 pcw_F_12885 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.87973 ZNF384_ES-E14_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TCF3_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-UPJH-0126-SM-4IHLL GTEx Tissue Sample Gene Expression Profiles 1.0 1.19332 15735024-SuppTable2 GeneSigDB Published Gene Signatures 1.0 null H3K4me1_cortical plate_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null HIST1H4F Pathway Commons Protein-Protein Interactions 1.0 null Perturb_17301_OE_Id4_SRP097179 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -4.21338 H3K4me1_ES-Bruce4_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null SP1_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-NPJ7-2926-SM-3MJGQ GTEx Tissue Sample Gene Expression Profiles 1.0 1.08557 Skin Cutaneous Melanoma_SKCM_TCGA-EE-A29V-06A-12R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-N7MS-0011-R1a-SM-2HMJG GTEx Tissue Sample Gene Expression Profiles 1.0 1.54224 MET_knockout_247_GDS3148 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -2.02169 Perturb_2369_KD_PRPF8_ERP008458 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 POP1 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_erythroblast_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null single-organism biosynthetic process GO Biological Process Annotations 2015 1.0 null CTCF_bronchial epithelial cell_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null USF2_02_25 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.5936 BATF ENCODE Transcription Factor Targets 1.0 null NFIC ENCODE Transcription Factor Targets 1.0 null JHOS-3 COSMIC Cell Line Gene Mutation Profiles 1.0 null CTCF_GM19239_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRAF_druginhibition_175_GSE42872 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -1.30028 GTEX-S7SF-0426-SM-3K2B7 GTEx Tissue Sample Gene Expression Profiles 1.0 1.3762 haloperidol-1144 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null HCC1806 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.770676 intracellular COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.25547 cognitive disorder DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.058889 nortriptyline-2391 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null disease of anatomical entity DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.042061 CBX3 ENCODE Transcription Factor Targets 1.0 null IRF1_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null BATF_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PTRF Pathway Commons Protein-Protein Interactions 1.0 null posteroventral (inferior) parietal cortex_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.958987 hippocampus (hippocampal formation)_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.02053 GTEX-Q734-0006-SM-2I3FJ GTEx Tissue Sample Gene Expression Profiles -1.0 -0.858353 POLR2A_heart_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null YY1_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-SNMC-1026-SM-4DM7K GTEx Tissue Sample Gene Expression Profiles 1.0 1.11311 RB1CC1 Pathway Commons Protein-Protein Interactions 1.0 null OPM-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.61367 CTCF_GM12873_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WVLH-0011-R2A-SM-3MJFJ GTEx Tissue Sample Gene Expression Profiles 1.0 1.27206 H2AFZ_fibroblast of dermis_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XXEK-0005-SM-4BRWJ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.09165 triflupromazine-1691 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null FUS Pathway Commons Protein-Protein Interactions 1.0 null GTEX-Q2AG-0011-R3A-SM-2HMJ9 GTEx Tissue Sample Gene Expression Profiles 1.0 1.26697 H3K79me2_myocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null valproic acid-5574 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-S3XE-0426-SM-3K2AC GTEx Tissue Sample Gene Expression Profiles -1.0 -0.97066 MRPS14 Pathway Commons Protein-Protein Interactions 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-WL-A834-01A-11R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PRDM16-22522345-PALATE_MESENCHYMAL-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null SOX15 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-RWSA-0005-SM-2XCAO GTEx Tissue Sample Gene Expression Profiles -1.0 -1.07718 NANOG ChEA Transcription Factor Targets 1.0 null thioridazine-6989 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-O5YT-0526-SM-32PK8 GTEx Tissue Sample Gene Expression Profiles 1.0 0.927342 genistein-638 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null NCI-H1693 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.33758 VZ in thalamic region Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.27123 Pancreatic adenocarcinoma_PAAD_TCGA-HV-A7OP-01A-11R-A33R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung adenocarcinoma_LUAD_TCGA-05-4398-01A-01R-1206-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null M059K Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.20604 alvespimycin-993 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H3K4me2_B cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null NCI-H1581 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.06305 0179445-0000-4292 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null POLR2AphosphoS2_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null XRN2 ChEA Transcription Factor Targets 1.0 null GTEX-XPT6-1626-SM-4B655 GTEx Tissue Sample Gene Expression Profiles 1.0 1.44365 GTEX-WL46-0626-SM-3LK7R GTEx Tissue Sample Gene Expression Profiles -1.0 -1.06398 DACH1-20351289-CHIP-SEQ-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null Necrosis CTD Gene-Disease Associations 1.0 1.79292 ethambutol-1481 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null YY1_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null diltiazem-1532 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null LU-99A COSMIC Cell Line Gene CNV Profiles 1.0 2.41451 HCC2279 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.5444 hippocampus (hippocampal formation)_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.46657 H3K4me3_megakaryocyte_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null GTEX-RWSA-2426-SM-47JXR GTEx Tissue Sample Gene Expression Profiles 1.0 0.850538 estropipate-6808 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null amrinone-3465 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null NOTCH1_Deficiency_GDS2848_635_mouse_Hair follicles GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null HNRNPF Pathway Commons Protein-Protein Interactions 1.0 null Brain Lower Grade Glioma_LGG_TCGA-VM-A8CF-01A-11R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Flocculus, molecular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.50441 Nucleus of the lateral olfactory tract, molecular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.26723 OLA1 Pathway Commons Protein-Protein Interactions 1.0 null orbital frontal cortex_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.1957 DDX18 Pathway Commons Protein-Protein Interactions 1.0 null RPS10 Pathway Commons Protein-Protein Interactions 1.0 null COLO-783 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.19754 GTEX-O5YV-0006-SM-2I5GX GTEx Tissue Sample Gene Expression Profiles -1.0 -1.1536 HCC193 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.27012 POLR2I Pathway Commons Protein-Protein Interactions 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-D3-A2J6-06A-11R-A18T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Perturb_6724_KD_PAF1_SRP103746 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 3.90264 RBMX Pathway Commons Protein-Protein Interactions 1.0 null SARS-BatSRBD_36Hour_23935999_GSE47960 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 1.68705 GTEX-Q2AG-0626-SM-2S1PV GTEx Tissue Sample Gene Expression Profiles 1.0 1.27313 PRPF4 Pathway Commons Protein-Protein Interactions 1.0 null EMG1 Pathway Commons Protein-Protein Interactions 1.0 null rostral ventral respiratory cell group Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.941962 17210682-SuppTable3 GeneSigDB Published Gene Signatures 1.0 null tanespimycin-2685 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-RWS6-0426-SM-47JXH GTEx Tissue Sample Gene Expression Profiles 1.0 0.987226 superficial stratum of r7Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.31869 HCFC1_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null periventricular stratum of r2Ve Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.20677 Flocculus, granular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.47892 GTEX-Q2AG-2926-SM-2HMJ3 GTEx Tissue Sample Gene Expression Profiles 1.0 1.47799 GTEX-XLM4-0011-R6A-SM-4AT4B GTEx Tissue Sample Gene Expression Profiles 1.0 0.854949 SNU668 CCLE Cell Line Gene CNV Profiles 1.0 1.47074 tcf12_20154672_cd4pos_cd8pos_thymocytes_thymus_lof_mouse_gpl6246_gse19923 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.028633 nordihydroguaiaretic acid-1003 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null POLR2AphosphoS5_GM12891_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null TRAF1 Pathway Commons Protein-Protein Interactions 1.0 null Prestwick-674-2179 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Brain Lower Grade Glioma_LGG_TCGA-QH-A6CW-01A-11R-A32Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null frontal pole, right, inferior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.15147 RAD21_MEL cell line_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCFC1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null FBXW8 Pathway Commons Protein-Protein Interactions 1.0 null plagl2_17983586_small_intestine_lof_mouse_gpl1261_gds3010 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations -1.0 -0.193881 SF3B3 Pathway Commons Protein-Protein Interactions 1.0 null nicardipine-5397 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null chlorpromazine-1822 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H3K4me3_small intestine_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null NFIC_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null 59M Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.957388 Lung squamous cell carcinoma_LUSC_TCGA-58-8387-01A-11R-2296-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hsa-miR-4776-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 0.965816 MG-63 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.74217 osteoblasts BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -0.958212 GTEX-S7PM-0526-SM-3NM92 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.20491 REST ENCODE Transcription Factor Targets 1.0 null GLDC Pathway Commons Protein-Protein Interactions 1.0 null CA2 field, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.33465 H3K27ac_bone marrow macrophage_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null SG in dorsolateral prefrontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.21956 SUZ12_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null prostate_4b HPA Tissue Sample Gene Expression Profiles 1.0 0.864471 ELF1 ENCODE Transcription Factor Targets 1.0 null CUL3 Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_GM10847_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null YY1_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-P4QR-0006-SM-2I5GN GTEx Tissue Sample Gene Expression Profiles -1.0 -1.48694 UBTF_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null posterior (caudal) superior temporal cortex (area 22c)_19 pcw_F_12885 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.29995 Pheochromocytoma and Paraganglioma_PCPG_TCGA-SR-A6MV-01A-11R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null OB olfactory fiber layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.29755 CD4_Memory_Primary_Cells Roadmap Epigenomics Cell and Tissue Gene Expression Profiles -1.0 -1.57234 GTEX-X585-0011-R8A-SM-46MUX GTEx Tissue Sample Gene Expression Profiles 1.0 0.847268 Lung adenocarcinoma_LUAD_TCGA-MP-A4T4-01A-11R-A262-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-XOTO-0011-R3A-SM-4B64W GTEx Tissue Sample Gene Expression Profiles 1.0 1.39423 15-delta prostaglandin J2-1011 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null IMR-32 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.861724 CA1 field, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.2629 genistein-6194 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null HCC2279 CCLE Cell Line Gene Expression Profiles 1.0 1.48522 striatum_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.61395 Skin Cutaneous Melanoma_SKCM_TCGA-EB-A4OY-01A-11R-A266-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GATA2 ENCODE Transcription Factor Targets 1.0 null Orbital area, ventrolateral part, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.33314 telenzepine-7419 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null trunk TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null basal ganglion TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null hsa-miR-4768-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.20993 SSBP3 Pathway Commons Protein-Protein Interactions 1.0 null 6-phosphogluconate dehydrogenase, C-terminal-like InterPro Predicted Protein Domain Annotations 1.0 null RBM39 Pathway Commons Protein-Protein Interactions 1.0 null PABPC1 Pathway Commons Protein-Protein Interactions 1.0 null superficial stratum of SePal Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.10552 H3K4me3_astrocyte of the spinal cord_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null procaine-1674 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null striatum_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.5117 cerebellar cortex_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.23398 Pancreatic adenocarcinoma_PAAD_TCGA-IB-A7M4-01A-11R-A36G-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-39-5034-01A-01R-1443-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null tanespimycin-998 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null PABPN1 Pathway Commons Protein-Protein Interactions 1.0 null OB mitral cell layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.15772 OVCAR8 BioGPS Cell Line Gene Expression Profiles 1.0 1.15576 CKAP4 Pathway Commons Protein-Protein Interactions 1.0 null whole body TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.692085 inner CP in ventrolateral prefrontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.934685 POLR2AphosphoS5_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null hippocampus (hippocampal formation)_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.03095 GTEX-WY7C-0006-SM-3NB3L GTEx Tissue Sample Gene Expression Profiles -1.0 -0.86054 MAZ_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null KAT2B ENCODE Transcription Factor Targets 1.0 null GTEX-PLZ6-0006-SM-33HBZ GTEx Tissue Sample Gene Expression Profiles -1.0 -4.16958 H3K4me3_CH12.LX_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null urinary system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.064406 H3K4me3_cardiac mesoderm_hg19_5 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_GM19193_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null primary visual cortex (striate cortex, area V1/17)_16 pcw_M_12287 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.934079 niclosamide-1498 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-OXRL-0005-SM-3LK6A GTEx Tissue Sample Gene Expression Profiles -1.0 -1.2378 EIF2S1 Pathway Commons Protein-Protein Interactions 1.0 null mianserin-6260 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null MAX_MCF-7_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null EFTUD2 Pathway Commons Protein-Protein Interactions 1.0 null neck TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null cellular_component LOCATE Predicted Protein Localization Annotations 1.0 null UBTF_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A708-01A-11R-A35K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-OOBK-0526-SM-2HMJJ GTEx Tissue Sample Gene Expression Profiles 1.0 0.92501 IQGAP1 Pathway Commons Protein-Protein Interactions 1.0 null CHCHD1 Pathway Commons Protein-Protein Interactions 1.0 null NFYB_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null FLI1 ChEA Transcription Factor Targets 1.0 null YY1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WFG7-0005-SM-3GIKM GTEx Tissue Sample Gene Expression Profiles -1.0 -1.55327 RFX5_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null C2BBE1 CCLE Cell Line Gene CNV Profiles -1.0 -1.36712 GTEX-R45C-0006-SM-3GAD6 GTEx Tissue Sample Gene Expression Profiles -1.0 -2.30644 MAZ ENCODE Transcription Factor Targets 1.0 null Anterior cingulate area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.06978 STAT3_MCF 10A_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K9ac_astrocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_Caco-2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null hippocampus (hippocampal formation)_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.1419 GTEX-WL46-0011-R10A-SM-3MJFQ GTEx Tissue Sample Gene Expression Profiles 1.0 0.901916 GTEX-WHSE-0011-R1A-SM-3P5ZK GTEx Tissue Sample Gene Expression Profiles 1.0 1.47103 CTCF_MCF-7_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_fibroblast of lung_hg19_6 ENCODE Histone Modification Site Profiles 1.0 null ZNF384_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_GM12892_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TOP1 Pathway Commons Protein-Protein Interactions 1.0 null posteromedial visual area, layer 4 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.05481 USF1_A549_hg19_6 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-VUSH-0005-SM-3NB2H GTEx Tissue Sample Gene Expression Profiles -1.0 -0.879681 U266B1 CCLE Cell Line Gene CNV Profiles -1.0 -2.29207 GTEX-RNOR-2426-SM-48FDY GTEx Tissue Sample Gene Expression Profiles 1.0 1.27607 LY-294002-2696 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H3K9ac_H1-hESC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null cyclopentolate-3555 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null buflomedil-4840 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H3K4me3_K562_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null MAX_H1-hESC_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null RPS13 Pathway Commons Protein-Protein Interactions 1.0 null LY-294002-996 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-QXCU-0008-SM-48FCH GTEx Tissue Sample Gene Expression Profiles 1.0 0.882606 H3K4me3_GM06990_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null clioquinol-5623 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null PRMT1 Pathway Commons Protein-Protein Interactions 1.0 null NANOG-16518401-MESC-mouse ChEA Transcription Factor Binding Site Profiles 1.0 null HARA CCLE Cell Line Gene CNV Profiles 1.0 1.63175 ZBTB7A_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null succinylsulfathiazole-4847 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GLTSCR2 Pathway Commons Protein-Protein Interactions 1.0 null NCI-N417 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.05517 Anterior olfactory nucleus, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.45732 H3K4me3_erythroblast_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null GTEX-N7MS-2625-SM-3LK77 GTEx Tissue Sample Gene Expression Profiles 1.0 1.13477 NFYB_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SUM102PT Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -1.37037 MAX_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null BACH1 ENCODE Transcription Factor Targets 1.0 null EWS-FLI1-20517297-SK-N-MC-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null EZH2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-SIU8-0526-SM-2XCDP GTEx Tissue Sample Gene Expression Profiles -1.0 -1.23519 CTCF_GM13977_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null A-Vietnam-1203_CIP048_RG3-2004(H5N1)mutPB2-627E_18Hour_None_GSE43203 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.84654 BT-483 COSMIC Cell Line Gene Mutation Profiles 1.0 null MYBL2_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RPL5 Pathway Commons Protein-Protein Interactions 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A6JN-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null U-937 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles 1.0 null cell COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.225976 Lung squamous cell carcinoma_LUSC_TCGA-58-A46J-01A-11R-A24H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SIMA CCLE Cell Line Gene Expression Profiles -1.0 -2.12376 H3K4me3_BE2C_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_CH12.LX_mm9_5 ENCODE Histone Modification Site Profiles 1.0 null PAX5_GM12892_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-SJXC-0526-SM-2XCFG GTEx Tissue Sample Gene Expression Profiles -1.0 -1.68221 superficial stratum of PO2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.84605 BHLHE40_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null hexamethonium bromide-1482 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null marrow cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.071318 MXI1_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null valproic acid-5600 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null MYC_K562_hg19_7 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-UPK5-0006-SM-3GAD8 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.926659 fenoprofen-3412 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-SIU7-1126-SM-2XCDW GTEx Tissue Sample Gene Expression Profiles 1.0 0.906788 GTEX-QDVN-0826-SM-48TZ2 GTEx Tissue Sample Gene Expression Profiles 1.0 1.71463 BCL3_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null rolipram-5330 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-7058-01A-11R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-PSDG-0008-SM-48TE5 GTEx Tissue Sample Gene Expression Profiles 1.0 1.5812 CTCF_fibroblast of lung_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null pyrazinamide_mus musculus_gpl6246_gse48027 GEO Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Lung adenocarcinoma_LUAD_TCGA-75-7031-01A-11R-1949-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-60-2726-01A-01R-0851-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_kidney epithelial cell_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null external part of AOD Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.78754 Head and Neck squamous cell carcinoma_HNSC_TCGA-D6-A6EP-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2A_bone marrow_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null KP4 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.36089 intestine TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.229568 ZC3H4 Pathway Commons Protein-Protein Interactions 1.0 null layer 2 of AOD cortex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.41022 Kidney renal clear cell carcinoma_KIRC_TCGA-G6-A5PC-01A-11R-A33J-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4338-01A-01R-1289-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-O5YT-0008-SM-4E3IQ GTEx Tissue Sample Gene Expression Profiles 1.0 0.839657 GTEX-XV7Q-1526-SM-4BRWB GTEx Tissue Sample Gene Expression Profiles 1.0 0.860386 HMGN3 ENCODE Transcription Factor Targets 1.0 null r4 part of pontine raphe cell population Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.60492 USF1_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null EP300_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_A549_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-OXRN-0005-SM-2I5EU GTEx Tissue Sample Gene Expression Profiles -1.0 -1.03076 KM12 BioGPS Cell Line Gene Expression Profiles 1.0 0.915343 GTEX-XOTO-0011-R1B-SM-4B65C GTEx Tissue Sample Gene Expression Profiles 1.0 1.06999 halcinonide-4703 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null STAT5A ENCODE Transcription Factor Targets 1.0 null H3K4me3_mammary epithelial cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-XF-A8HG-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null EIF3G Pathway Commons Protein-Protein Interactions 1.0 null blood TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.228764 LBP Pathway Commons Protein-Protein Interactions 1.0 null gallamine triethiodide-2059 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Lung squamous cell carcinoma_LUSC_TCGA-60-2719-01A-01R-0851-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null probenecid-2825 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null posterior group of nuclei, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.39189 cell part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.225976 colorectum TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.217346 QARS Pathway Commons Protein-Protein Interactions 1.0 null HCC1569 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.683298 DDX3X Pathway Commons Protein-Protein Interactions 1.0 null VIIIB, left, paravermis Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.826708 GTEX-POYW-0526-SM-2XCEY GTEx Tissue Sample Gene Expression Profiles -1.0 -2.46391 RUNX1 ChEA Transcription Factor Targets 1.0 null H4K20me1_astrocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null leg muscle TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.131386 POLR2A_HepG2_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null AOB, mitral cell layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.47188 SIN3A_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-X4EO-0526-SM-3P5Z3 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.872766 MYC_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MATR3 Pathway Commons Protein-Protein Interactions 1.0 null ZFR Pathway Commons Protein-Protein Interactions 1.0 null RPS11 Pathway Commons Protein-Protein Interactions 1.0 null halofantrine-6509 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null MRPL12 Pathway Commons Protein-Protein Interactions 1.0 null rhombomere 11 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.13424 MAX_NB4_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RBM17 Pathway Commons Protein-Protein Interactions 1.0 null PLRG1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-R55F-1526-SM-2TF4X GTEx Tissue Sample Gene Expression Profiles -1.0 -1.3167 ELF1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null IARS Pathway Commons Protein-Protein Interactions 1.0 null Perturb_12524_KD_Linc00673_SRP212104 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 H3K4me3_SK-N-MC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null r3 roof plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.39252 Sarcoma_SARC_TCGA-PT-A8TR-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null RPL6 Pathway Commons Protein-Protein Interactions 1.0 null plastid stroma COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.136863 Kidney renal clear cell carcinoma_KIRC_TCGA-B4-5835-01A-11R-1672-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null spectinomycin-2987 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null PBX3 ENCODE Transcription Factor Targets 1.0 null SG in medial temporal-occipital cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.12109 HDLBP Pathway Commons Protein-Protein Interactions 1.0 null BYSL Pathway Commons Protein-Protein Interactions 1.0 null r4 part of ventral parvicellular reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.29965 STRAP Pathway Commons Protein-Protein Interactions 1.0 null H3K27ac_small intestine_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A6JE-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A62S-01A-11R-A30C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null intracellular part LOCATE Predicted Protein Localization Annotations 1.0 null H3K4me1_megakaryocyte_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_Jurkat_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null NCI-H2196 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.71131 H3K79me2_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null YY1_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CEBPB_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null hsa-miR-940 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.965816 POLR2AphosphoS5_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-Q2-A5QZ-01A-11R-A28H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HCC1428 CCLE Cell Line Gene CNV Profiles -1.0 -3.21049 H3K4me1_mammary epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-OHPL-1626-SM-2HMIR GTEx Tissue Sample Gene Expression Profiles -1.0 -0.877549 Lung adenocarcinoma_LUAD_TCGA-86-A4D0-01A-11R-A24H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null primary visual cortex (striate cortex, area V1/17)_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.950329 GATA1 ENCODE Transcription Factor Targets 1.0 null FOXA2_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null OVCAR-4 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.845234 GTEX-U3ZM-0926-SM-4DXSW GTEx Tissue Sample Gene Expression Profiles 1.0 2.17415 central nervous system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null hsa-miR-4313 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.20993 Poisoning CTD Gene-Disease Associations 1.0 1.58137 POLR2A_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null skeletalmuscle_d HPA Tissue Sample Gene Expression Profiles -1.0 -1.24767 gabexate-4804 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null torc2 complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.233817 Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-A642-01A-12R-A30B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Orbital area, ventrolateral part, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.36912 icSARA deltaORF6_54Hour_23365422_GSE33267 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 1.69579 IZ in midcingulate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.50755 POLR2A_myocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-QLQW-0226-SM-447BJ GTEx Tissue Sample Gene Expression Profiles 1.0 1.79515 septostriatal transition area (accumbens) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.00208 GTEX-WZTO-3026-SM-3NMA2 GTEx Tissue Sample Gene Expression Profiles 1.0 0.929338 inferior olive, medial nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.84886 POLR2A Pathway Commons Protein-Protein Interactions 1.0 null U266B1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -2.09755 Adenoma of small intestine_Intestinal Epithelium_GSE422 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -2.15872 inner SZ in primary somatosensory cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.16781 SNRPD3 Pathway Commons Protein-Protein Interactions 1.0 null carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.0605 inferolateral temporal cortex (area TEv, area 20)_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.31684 inferolateral temporal cortex (area TEv, area 20)_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.4671 hematopoietic stem cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.068072 CTCF_G1E_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null FOXM1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null layer 1 of LOT Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.40024 GTEX-PWN1-1626-SM-2S1OL GTEx Tissue Sample Gene Expression Profiles -1.0 -0.857534 NCIH650 CCLE Cell Line Gene CNV Profiles -1.0 -1.37402 17616640-TableS3 GeneSigDB Published Gene Signatures 1.0 null KELLY Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.27923 GTEX-RVPU-2426-SM-2XCAR GTEx Tissue Sample Gene Expression Profiles -1.0 -1.30691 GTEX-RU1J-0226-SM-2TF5Y GTEx Tissue Sample Gene Expression Profiles 1.0 0.861153 RERF-LC-OK Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.9726 PCBP1 Pathway Commons Protein-Protein Interactions 1.0 null Brain Lower Grade Glioma_LGG_TCGA-DB-5277-01A-01R-1470-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HCC4017 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.12999 single-organism process GO Biological Process Annotations 2015 1.0 null FLI1 ENCODE Transcription Factor Targets 1.0 null pallidal septum Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.08062 heart GTEx Tissue Gene Expression Profiles -1.0 -1.14594 respiratory system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null stomach_3b HPA Tissue Sample Gene Expression Profiles 1.0 1.28342 hsa-miR-4270 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.843347 NPM1 Pathway Commons Protein-Protein Interactions 1.0 null polysensory temporal cortex (area 22p) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.848032 SCC-9 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.968737 Perturb_4876_KD_BANCR_SRP135857 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 5.83859 15902281-TableS1a GeneSigDB Published Gene Signatures 1.0 null STAT5A_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null isotretinoin-2407 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null acetazolamide-7461 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null SOX17-20123909-XEN-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null mediodorsal nucleus of thalamus_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.918591 5255229-833 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null CD4_Naive_Primary_Cells Roadmap Epigenomics Cell and Tissue Gene Expression Profiles -1.0 -0.964567 GTEX-SUCS-0006-SM-4DM59 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.94744 GTEX-POMQ-0326-SM-2I5FO GTEx Tissue Sample Gene Expression Profiles -1.0 -1.07337 KDM4A ENCODE Transcription Factor Targets 1.0 null ventrolateral prefrontal cortex_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.33581 CTCF_K562_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null kidney_a HPA Tissue Sample Gene Expression Profiles 1.0 1.17897 DHX9 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_fibroblast of lung_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null fallopiantube_5a HPA Tissue Sample Gene Expression Profiles 1.0 0.857633 GTEX-OHPK-0006-SM-2HMKH GTEx Tissue Sample Gene Expression Profiles -1.0 -0.849703 18504433-SuppTable1 GeneSigDB Published Gene Signatures 1.0 null UACC893 CCLE Cell Line Gene CNV Profiles 1.0 1.35418 ribostamycin-7123 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-XMK1-1026-SM-4B65H GTEx Tissue Sample Gene Expression Profiles 1.0 1.60734 GTEX-RN64-0326-SM-2TC5J GTEx Tissue Sample Gene Expression Profiles -1.0 -1.17296 hsa-miR-1909 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.13535 Acute Myeloid Leukemia_LAML_TCGA-AB-2908-03A-01T-0740-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_epithelial cell of proximal tubule_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null KDM5A ENCODE Transcription Factor Targets 1.0 null nordihydroguaiaretic acid-6983 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null layer 4 of FCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.07594 U2AF2 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-TKQ1-0926-SM-4DXU2 GTEx Tissue Sample Gene Expression Profiles 1.0 0.981356 COLO 680N Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.1703 H3K27ac_endothelial cell of umbilical vein_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-OXRP-0006-SM-2I3FN GTEx Tissue Sample Gene Expression Profiles -1.0 -1.8962 GTEX-WRHU-1226-SM-4E3IJ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.11855 GTEX-WVLH-0011-R10A-SM-3MJFM GTEx Tissue Sample Gene Expression Profiles 1.0 0.929494 trifluoperazine-2389 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Lung adenocarcinoma_LUAD_TCGA-78-8660-01A-11R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null 721_B_lymphoblasts BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 1.30758 Lung adenocarcinoma_LUAD_TCGA-53-A4EZ-01A-12R-A24X-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K27ac_kidney_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null RPL18 Pathway Commons Protein-Protein Interactions 1.0 null Atherosclerosis_Hepatic Tissue_GSE363 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 1.59585 YY1_GM12891_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null antazoline-7128 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-QCQG-0006-SM-2S1OW GTEx Tissue Sample Gene Expression Profiles -1.0 -1.48489 tor complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.139244 MAX_HCT116_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_7609_KD_YY1_SRP237753 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -4.09336 Prestwick-675-2187 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null dorsolateral prefrontal cortex_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.992424 NAD(P)-binding domain InterPro Predicted Protein Domain Annotations 1.0 null GTEX-TMZS-0326-SM-3DB9P GTEx Tissue Sample Gene Expression Profiles -1.0 -0.87117 HS 852.T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.0524 GTEX-OOBK-1626-SM-2HMKG GTEx Tissue Sample Gene Expression Profiles -1.0 -1.3128 phensuximide-5522 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Prostate adenocarcinoma_PRAD_TCGA-QU-A6IM-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CAL120 CCLE Cell Line Gene CNV Profiles -1.0 -1.35072 cerebellar cortex_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.17851 IL2_UP.V1 MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-PQ-A6FN-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null lateral group of nuclei, left, dorsal division Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.06196 DorsalRootGanglion BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -0.943324 sulfamethizole-6272 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-WZTO-0011-R3B-SM-3NMC6 GTEx Tissue Sample Gene Expression Profiles 1.0 0.887114 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6937-01A-11R-2016-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null RAD21_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null PSMB2 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_cardiac fibroblast_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null ALYREF Pathway Commons Protein-Protein Interactions 1.0 null cinchocaine-4068 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null periventricular stratum of AOB Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.31727 H3K27ac_keratinocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null etanidazole-6211 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null CTCF_cortical plate_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H716 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.10551 C14orf166 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_Mobilized CD34 Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null caudal portion of VFC (area 44) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.35508 cetirizine-2468 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null CCDC8 Pathway Commons Protein-Protein Interactions 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-5330-01A-01R-1686-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-PVOW-0011-R3A-SM-32PKX GTEx Tissue Sample Gene Expression Profiles 1.0 0.943544 Skin Cutaneous Melanoma_SKCM_TCGA-FS-A1ZU-06A-12R-A18T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null EBF1_GM12878_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_GM12875_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null cytoplasm COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.31783 CTCF_WERI-Rb-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-OOBK-0008-SM-3NB27 GTEx Tissue Sample Gene Expression Profiles 1.0 1.08881 8-azaguanine-7444 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null HCC1569 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.13291 G-MEL COSMIC Cell Line Gene Mutation Profiles 1.0 null CTCF_K562_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null caudal (posterior) extramural migratory stream Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.908492 GTEX-Q2AI-0006-SM-2I3FG GTEx Tissue Sample Gene Expression Profiles -1.0 -2.03653 COLO680N CCLE Cell Line Gene Expression Profiles -1.0 -1.53126 EIF3I Pathway Commons Protein-Protein Interactions 1.0 null r5 part of basolateral reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.44769 TBL1XR1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PRKAA2 Pathway Commons Protein-Protein Interactions 1.0 null ATG13 Pathway Commons Protein-Protein Interactions 1.0 null Perturb_16786_KD|OE_AMIGO2|CAPN2_SRP369776 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 temporal lobe TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null primary motor cortex (area M1, area 4)_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.2407 VZ in midlateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.55439 H3K4me1_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K9ac_K562_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null chlorpromazine-997 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null RABGAP1 Pathway Commons Protein-Protein Interactions 1.0 null FXR1 Pathway Commons Protein-Protein Interactions 1.0 null mercaptopurine-334 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4761-01A-01R-1289-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HDAC2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_cardiac mesoderm_hg19_8 ENCODE Histone Modification Site Profiles 1.0 null Anterior cingulate area, dorsal part, layer 6a Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.16363 amiprilose-3000 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-WHSB-1826-SM-3TW8M GTEx Tissue Sample Gene Expression Profiles -1.0 -1.08864 Pheochromocytoma and Paraganglioma_PCPG_TCGA-SP-A6QF-01A-12R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5707-01A-11R-1541-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null reuniens nucleus (medioventral nucleus) of thalamus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.03955 azaperone-7231 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null episupraoptic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -3.26234 HN Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.04758 HCC1954 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -0.962143 KP-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.8707 H3K4me3_astrocyte of the cerebellum_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-UPIC-0005-SM-3GACV GTEx Tissue Sample Gene Expression Profiles -1.0 -0.924235 POLR2B Pathway Commons Protein-Protein Interactions 1.0 null amoxapine-4996 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null CTCF_K562_hg19_7 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_H1-hESC_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null ZFP91 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_cardiac mesoderm_hg19_7 ENCODE Histone Modification Site Profiles 1.0 null intermediate part of r5B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.37096 ARID3A ENCODE Transcription Factor Targets 1.0 null HDAC2_MCF-7_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-QK-A6IJ-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Dorsal peduncular area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.23126 intracellular membrane-bounded organelle LOCATE Predicted Protein Localization Annotations 1.0 null naringin-5666 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-PLZ5-0326-SM-3P614 GTEx Tissue Sample Gene Expression Profiles 1.0 0.976335 KHM-1B Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.10967 isotretinoin-6017 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H3K4me3_A549_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A5BX-01A-11R-A26T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EA-A4BA-01A-21R-A26T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H2AFZ_skeletal muscle myoblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-N7MS-2326-SM-2HMLD GTEx Tissue Sample Gene Expression Profiles 1.0 1.16008 Brain Lower Grade Glioma_LGG_TCGA-QH-A6CU-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null AKT1_knockout_214_GSE39699 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -1.47278 r8 portion of ambiguous motor nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.11305 TBP_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K79me2_MEL cell line_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null KATO III Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.829453 GTEX-RWSA-0008-SM-47JYX GTEx Tissue Sample Gene Expression Profiles 1.0 1.0772 KDM1A_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCoV-EMC2012_3Hour_23631916_GSE45042 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 1.14456 H3K4me3_Treg Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null 17555561-Table1 GeneSigDB Published Gene Signatures 1.0 null NCI-H1648 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.72633 EEF2 Pathway Commons Protein-Protein Interactions 1.0 null IRF1 ENCODE Transcription Factor Targets 1.0 null YY1_GM12892_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EZH2 ENCODE Transcription Factor Targets 1.0 null H3K4me3_H7_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null mantle zone of r4BL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.4266 Atrophy CTD Gene-Disease Associations 1.0 1.11707 NOTCH_INHIBITION_GDS2794_61_human_MOLT4 (T-cell acute lymphoblast leukemia) cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null H3K4me3_GM12865_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-V1D1-0008-SM-4JBIJ GTEx Tissue Sample Gene Expression Profiles 1.0 1.43827 H4K5ac_H1 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null MYC_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4844-01A-01R-1277-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null temporal pole, right, medial aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.46692 primary somatosensory cortex (area S1, areas 3,1,2)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.02795 H3K4me3_thymus_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null membrane-bounded organelle LOCATE Predicted Protein Localization Annotations 1.0 null EWSR1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-XQ3S-1726-SM-4BOOD GTEx Tissue Sample Gene Expression Profiles 1.0 1.33973 Head and Neck squamous cell carcinoma_HNSC_TCGA-D6-A6EN-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TAF15 Pathway Commons Protein-Protein Interactions 1.0 null SP in rostral perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.02511 OCI-AML5 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.05448 CTCF_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_lung_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-RVPU-0011-R5A-SM-2XCAD GTEx Tissue Sample Gene Expression Profiles 1.0 0.824459 hsa-miR-4707-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.40969 GTEX-S4P3-0226-SM-3K2BD GTEx Tissue Sample Gene Expression Profiles 1.0 0.91155 H3K4me2_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null RPL26 Pathway Commons Protein-Protein Interactions 1.0 null orbital frontal cortex_17 pcw_F_12880 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.05735 A549 COSMIC Cell Line Gene Mutation Profiles 1.0 null SG in primary auditory cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.9543 GTEX-U3ZM-1626-SM-4DXSK GTEx Tissue Sample Gene Expression Profiles 1.0 0.932602 layer 1 of AOD cortex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.89092 posterior (caudal) superior temporal cortex (area 22c)_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.834901 PHF8_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_GM06990_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Adrenocortical carcinoma_ACC_TCGA-OR-A5JB-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null chloroplast stroma COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.171937 GTEX-RWSA-0726-SM-2XCBE GTEx Tissue Sample Gene Expression Profiles -1.0 -1.39301 SIN3A_SK-N-SH_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null superior olivary complex, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.48725 H3K4me3_spleen_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null YY1_GM12891_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_lung_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ribavirin_homo sapiens_gpl570_gds4391 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null CTCF_WERI-Rb-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GABPA ENCODE Transcription Factor Targets 1.0 null UACC-812 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.10647 oxidation-reduction process GO Biological Process Annotations 2015 1.0 null TCF12_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null inferior olive, dorsal nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.857489 MG63 CCLE Cell Line Gene Expression Profiles 1.0 1.42928 H3K4me1_HeLa-S3_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null SR Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.38473 Medial septal complex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.11744 H3K4me3_H7_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Perturb_17045_KD_BATF3_SRP230607 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -13.0549 Liver hepatocellular carcinoma_LIHC_TCGA-DD-A3A7-01A-11R-A22L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null AASDHPPT Pathway Commons Protein-Protein Interactions 1.0 null posterior (caudal) superior temporal cortex (area 22c)_16 pcw_M_12287 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.27745 GTEX-U3ZG-0006-SM-47JWX GTEx Tissue Sample Gene Expression Profiles -1.0 -0.942129 HNRNPD Pathway Commons Protein-Protein Interactions 1.0 null CTCF_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-REY6-0826-SM-2TF4S GTEx Tissue Sample Gene Expression Profiles -1.0 -1.65697 CTCF_GM12866_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Drug-Induced Liver Injury CTD Gene-Disease Associations 1.0 1.76868 Type 1 diabetes mellitus_Muscle - Striated (Skeletal) (MMHCC)_GSE1659 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -1.45028 intermediate stratum of r10BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.48247 FAR1 Pathway Commons Protein-Protein Interactions 1.0 null BRD4_01_311 KnockTF Gene Expression Profiles with Transcription Factor Perturbations 1.0 1.38164 H3K4me3_K562_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null CTCF_GM12872_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ATP5D Pathway Commons Protein-Protein Interactions 1.0 null UBC Pathway Commons Protein-Protein Interactions 1.0 null hippocampus (hippocampal formation)_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.26154 HS255T CCLE Cell Line Gene Expression Profiles -1.0 -1.56902 PRDM16 ChEA Transcription Factor Targets 1.0 null MGE-Lateral region Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.20823 Orbital area, lateral part, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.39982 ACOT9 Pathway Commons Protein-Protein Interactions 1.0 null TAF1_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null TC-71 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.842379 r6 part of the cochlear column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.07461 Fibrosis CTD Gene-Disease Associations 1.0 1.15593 NFIC_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null medial septal nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.87401 Heart BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 0.871002 GTEX-XUW1-0005-SM-4BOQ7 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.948736 Prostate adenocarcinoma_PRAD_TCGA-KK-A6E8-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_SK-N-SH_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-X261-0326-SM-3NMD4 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.24966 geldanamycin-2688 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null glipizide-4991 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null FOXP2 ENCODE Transcription Factor Targets 1.0 null prenylamine-2886 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null PSMA4 Pathway Commons Protein-Protein Interactions 1.0 null Brain Lower Grade Glioma_LGG_TCGA-P5-A72W-01A-11R-A32Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null metamizole sodium-2175 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null 18801183-SuppTable1 GeneSigDB Published Gene Signatures 1.0 null MESSA CCLE Cell Line Gene Expression Profiles 1.0 1.39052 TFB2M Pathway Commons Protein-Protein Interactions 1.0 null hsa-miR-498 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.843347 CBX3_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-T6MO-0006-SM-32QOU GTEx Tissue Sample Gene Expression Profiles -1.0 -1.88267 POLR2AphosphoS5_U-87 MG_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27ac_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-Q2AG-0426-SM-2S1PU GTEx Tissue Sample Gene Expression Profiles -1.0 -0.999636 IX, left, lateral hemisphere Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.10148 dorsolateral prefrontal cortex_19 yrs_F_12832 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.829019 stratum pyramidale of rostral CA1 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.08789 RPL17 Pathway Commons Protein-Protein Interactions 1.0 null Brain Lower Grade Glioma_LGG_TCGA-RY-A83Z-01A-11R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null 23132-87 COSMIC Cell Line Gene Mutation Profiles 1.0 null H3K79me2_C2C12_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null NSUN2 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_NB4_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null POLR2AphosphoS5_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null globose nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.20682 CTCF_GM20000_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H4K8ac_IMR90 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null RAD21_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MOLM-16 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.57163 CTCF ENCODE Transcription Factor Targets 1.0 null SRPR Pathway Commons Protein-Protein Interactions 1.0 null ifosfamide-6279 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null SND1 Pathway Commons Protein-Protein Interactions 1.0 null occipital neocortex_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.28342 cefaclor-4967 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null diclofenac-333 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null skin disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.28616 EIF3C Pathway Commons Protein-Protein Interactions 1.0 null Main olfactory bulb, glomerular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.38406 r9 part of basomedial reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.03661 Lung adenocarcinoma_LUAD_TCGA-78-7535-01A-11R-2066-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_foreskin fibroblast_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null intracellular part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.204039 MXI1_SK-N-SH_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null inferolateral temporal cortex (area TEv, area 20)_10 mos_M_12977 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.887343 POLR2A_HeLa-S3_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-AL-A5DJ-01A-11R-A26U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HS751T CCLE Cell Line Gene Expression Profiles -1.0 -1.4771 primary visual cortex (striate cortex, area V1/17)_17 pcw_F_12880 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.900748 MRM1 Pathway Commons Protein-Protein Interactions 1.0 null 19061838-TableS15 GeneSigDB Published Gene Signatures 1.0 null H3K4me3_HepG2_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null NEDD8 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_fibroblast of gingiva_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null animal TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null DV-90 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.14199 C32 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.15559 alpha-estradiol-6169 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-BA-A6D8-01A-31R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null primary metabolic process GO Biological Process Annotations 2015 1.0 null GTEX-Q2AG-3026-SM-48U1L GTEx Tissue Sample Gene Expression Profiles 1.0 1.80055 HNRNPC Pathway Commons Protein-Protein Interactions 1.0 null cefapirin-7142 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H3K4me3_cardiac fibroblast_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null CEBPB_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HDAC1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-PLZ5-1726-SM-2I5F6 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.955477 inferolateral temporal cortex (area TEv, area 20)_37 yrs_M_12303 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.29262 cerebellar cortex_37 pcw_M_263195015 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.15126 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EA-A556-01A-11R-A26T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Fetal Death CTD Gene-Disease Associations 1.0 1.2336 H3K9ac_GM12878_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null SNRPC Pathway Commons Protein-Protein Interactions 1.0 null RPL35 Pathway Commons Protein-Protein Interactions 1.0 null GTF2F1_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SYNCRIP Pathway Commons Protein-Protein Interactions 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-DD-A39Y-01A-11R-A213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SP4 ENCODE Transcription Factor Targets 1.0 null Abnormalities, Drug-Induced CTD Gene-Disease Associations 1.0 1.17034 PBX3_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null primary motor cortex (area M1, area 4)_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.2457 posterior cortical nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.23944 H3K4me3_SK-N-SH_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null DKC1 Pathway Commons Protein-Protein Interactions 1.0 null aerial part TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.663962 H3K4me1_testis_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XPVG-0826-SM-4B654 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.869636 proline metabolic process GO Biological Process Annotations 2015 1.0 null GTEX-WZTO-0826-SM-3NM8Q GTEx Tissue Sample Gene Expression Profiles -1.0 -1.36386 inferolateral temporal cortex (area TEv, area 20)_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 2.77769 mediodorsal nucleus of thalamus_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.23979 SFPQ Pathway Commons Protein-Protein Interactions 1.0 null GTEX-XQ3S-2726-SM-4BOP2 GTEx Tissue Sample Gene Expression Profiles 1.0 1.31429 IRF4_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Orbital area, medial part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.67204 ZCCHC3 Pathway Commons Protein-Protein Interactions 1.0 null IMP3 Pathway Commons Protein-Protein Interactions 1.0 null GATA3 JASPAR Predicted Transcription Factor Targets 1.0 null wt1_00000000_mouse_embryonic_fibroblast_mef_lof_mouse_gpl1261_gse15325 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations -1.0 -1.02695 GTEX-UTHO-0006-SM-3NMCC GTEx Tissue Sample Gene Expression Profiles -1.0 -1.17575 GTEX-QEG4-0126-SM-48TZE GTEx Tissue Sample Gene Expression Profiles 1.0 1.24617 mesalazine-3584 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null cerebellar cortex_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.908525 dienestrol-3448 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H3ac_C2C12_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null ventrolateral prefrontal cortex_19 pcw_F_12885 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.19505 ZBTB7A_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ETS1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Uterine Carcinosarcoma_UCS_TCGA-QN-A5NN-01A-11R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PAX5_GM12878_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null basomedial nucleus (accessory basal nucleus) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.29663 H3K4me3_BE2C_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-FG-A60L-01A-12R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_MCF-7_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null RBM3 Pathway Commons Protein-Protein Interactions 1.0 null RCOR1 ENCODE Transcription Factor Targets 1.0 null extracellular matrix part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.226686 H3K4me3_LNCaP clone FGC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null organic substance biosynthetic process GO Biological Process Annotations 2015 1.0 null Spinal nucleus of the trigeminal, caudal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.07549 Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A62P-01A-32R-A30C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null rotenone-5915 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null RPL15 Pathway Commons Protein-Protein Interactions 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2MH-06A-11R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2A_MCF 10A_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SNRPE Pathway Commons Protein-Protein Interactions 1.0 null Brain Lower Grade Glioma_LGG_TCGA-CS-6666-01A-11R-1896-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HCC1937 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.99941 wing TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.543359 drofenine-6776 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null MYC_MCF-7_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null RPS15A Pathway Commons Protein-Protein Interactions 1.0 null PHF8_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null DEOC-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.17317 MTA3 ENCODE Transcription Factor Targets 1.0 null periventricular stratum of r6Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.41347 MRPS27 Pathway Commons Protein-Protein Interactions 1.0 null internal female genital organ TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.053514 microbody LOCATE Predicted Protein Localization Annotations 1.0 null SIN3A_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WL46-2926-SM-3LK82 GTEx Tissue Sample Gene Expression Profiles 1.0 1.5334 AM-38 GDSC Cell Line Gene Expression Profiles 1.0 1.69184 head TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.053876 GTEX-T6MN-0011-R10A-SM-32QP7 GTEx Tissue Sample Gene Expression Profiles 1.0 1.38944 SC-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.21484 BV-173 COSMIC Cell Line Gene CNV Profiles 1.0 2.41451 CA1 field, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.67741 KG1 CCLE Cell Line Gene CNV Profiles 1.0 1.85794 ELK1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SJRH30 GDSC Cell Line Gene Expression Profiles -1.0 -1.52997 KMS-12-BM Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.99022 demecarium bromide-6269 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null C-33-A COSMIC Cell Line Gene Mutation Profiles 1.0 null caudal presubiculum (postsubiculum) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.918926 GTEX-WHSE-1126-SM-3NMBU GTEx Tissue Sample Gene Expression Profiles -1.0 -0.958614 CTCF_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-RU72-0226-SM-46MUD GTEx Tissue Sample Gene Expression Profiles 1.0 0.95905 MYC_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null corpus callosum Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.60792 GTEX-RVPV-1226-SM-2TF73 GTEx Tissue Sample Gene Expression Profiles 1.0 1.08137 triflusal-7451 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null TAF1_SK-N-SH_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null THRAP3 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-WVLH-0626-SM-3MJG7 GTEx Tissue Sample Gene Expression Profiles 1.0 0.87832 H3K27me3_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCIH1876 CCLE Cell Line Gene Expression Profiles -1.0 -1.86874 H3K4me1_bone marrow macrophage_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null sirolimus-6180 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null DAZAP1 Pathway Commons Protein-Protein Interactions 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-EP-A3JL-01A-11R-A213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-NL3H-0011-R7a-SM-2I3G5 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.03614 H3K27ac_fibroblast of dermis_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null cerebral hemisphere TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null cytoplasmic part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.362422 H4K20me1_osteoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null CEBPB_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null TECR Pathway Commons Protein-Protein Interactions 1.0 null chlorzoxazone-2263 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Pyrroline-5-carboxylate reductase InterPro Predicted Protein Domain Annotations 1.0 null haloperidol-983 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null EVSAT CCLE Cell Line Gene Expression Profiles 1.0 1.50664 FOXA1 ENCODE Transcription Factor Targets 1.0 null maprotiline-3236 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null principal sensory nucleus of trigeminal nerve Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.844628 budesonide-6330 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null bufexamac-2382 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-WHSE-0006-SM-3NMBW GTEx Tissue Sample Gene Expression Profiles -1.0 -0.916576 TAF1_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-T6MN-1226-SM-3NMA5 GTEx Tissue Sample Gene Expression Profiles 1.0 0.944239 HCC1599 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.31406 HELA BioGPS Cell Line Gene Expression Profiles 1.0 0.851409 H3K36me3_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-Q2AH-0005-SM-33HBR GTEx Tissue Sample Gene Expression Profiles -1.0 -1.79372 GTEX-XOTO-3026-SM-4B65M GTEx Tissue Sample Gene Expression Profiles 1.0 1.04674 GTEX-RTLS-0006-SM-2TF58 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.70087 POLR2A_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null outer plexiform zone in extrastriate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.844431 fluspirilene-5008 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null CTCF_C2C12_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCFC1 ENCODE Transcription Factor Targets 1.0 null CTCF_GM12864_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MIR34_OE_GDS2755_645_human_HCT116 cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null VZ in septal region Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.08002 TCF12_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null TAF1_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_GM12892_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null amygdaloid complex_16 pcw_M_12879 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.972739 striatum_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.19178 superficial stratum of POH Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -3.25286 H3K4me1_astrocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null PRPF8 Pathway Commons Protein-Protein Interactions 1.0 null alpha-amino acid metabolic process GO Biological Process Annotations 2015 1.0 null lateral habenular nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.361 Brain Lower Grade Glioma_LGG_TCGA-HT-7604-01A-11R-2090-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_GM06990_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BATF_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null upper (rostral) rhombic lip_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.55701 PRKAA1 Pathway Commons Protein-Protein Interactions 1.0 null Orbital area, medial part, layer 2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.62515 hsa-miR-3176 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.2992 H3K4me3_GM12866_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GATA1_erythroblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null STAT4 ChEA Transcription Factor Targets 1.0 null BHLHE40 ENCODE Transcription Factor Targets 1.0 null TSPYL4 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-S7SE-0011-R4A-SM-2XCDB GTEx Tissue Sample Gene Expression Profiles 1.0 1.27191 SNRNP70 Pathway Commons Protein-Protein Interactions 1.0 null SP1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-T5JW-1826-SM-3GAE1 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.865642 UFL1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-OIZH-1626-SM-2HMKI GTEx Tissue Sample Gene Expression Profiles -1.0 -2.02988 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-5977-01A-11R-1686-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-Q2AI-1526-SM-3GIJ3 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.26916 Perturb_7639_KD_PCF11_SRP169609 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 5.01063 TIA1_KO_GSE54418_263_mouse_spinal cord GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null SRSF1 Pathway Commons Protein-Protein Interactions 1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2824-03A-01T-0736-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2A_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_HepG2_hg19_6 ENCODE Transcription Factor Binding Site Profiles 1.0 null FOS_MCF 10A_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null JURKAT CCLE Cell Line Gene Expression Profiles -1.0 -1.61774 CTCF_fibroblast of pulmonary artery_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null pancreas ProteomicsDB Cell Type and Tissue Protein Expression Profiles -1.0 -1.11576 wortmannin-911 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null posterior (caudal) superior temporal cortex (area 22c)_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.1968 GTEX-P4PQ-0005-SM-2HMKJ GTEx Tissue Sample Gene Expression Profiles -1.0 -2.21878 BL41 CCLE Cell Line Gene CNV Profiles 1.0 1.46586 HL60 BioGPS Cell Line Gene Expression Profiles -1.0 -2.07588 fenofibrate-7474 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null CTCF_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null AIMP1 Pathway Commons Protein-Protein Interactions 1.0 null OCIM1 CCLE Cell Line Gene Expression Profiles -1.0 -1.56737 TAF1_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ZNF143 ENCODE Transcription Factor Targets 1.0 null H3K4me3_CH12.LX_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Oligospermia CTD Gene-Disease Associations 1.0 1.19802 pyrvinium-978 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null HCC1937 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 1.1428 MOGS Pathway Commons Protein-Protein Interactions 1.0 null KHDRBS1 Pathway Commons Protein-Protein Interactions 1.0 null Primary hematopoietic stem cells G-CSF-mobilized Female RO_01549 Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles 1.0 1.06386 MYC ENCODE Transcription Factor Targets 1.0 null small molecule metabolic process GO Biological Process Annotations 2015 1.0 null limb TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.092885 UT7 CCLE Cell Line Gene Expression Profiles -1.0 -1.93714 H3K4me2_endothelial cell of umbilical vein_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null ELK1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null hsa-miR-3135b TargetScan Predicted Nonconserved microRNA Targets 1.0 0.921135 Nucleus of the lateral lemniscus, horizontal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.1316 embryonic stem no feeder BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -1.03872 Lung squamous cell carcinoma_LUSC_TCGA-63-A5MI-01A-12R-A27Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Orbital area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.39721 SG in inferolateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.95225 H3K27ac_B cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null salivarygland_6c HPA Tissue Sample Gene Expression Profiles 1.0 0.853309 GTEX-OHPM-0006-SM-2HMKU GTEx Tissue Sample Gene Expression Profiles -1.0 -1.83544 GTEX-XUZC-0126-SM-4BOO6 GTEx Tissue Sample Gene Expression Profiles 1.0 1.37099 primary somatosensory cortex (area S1, areas 3,1,2)_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.94009 thiamine-7479 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null BL7566 (HERC2) NURSA Protein Complexes 1.0 null KMS12BM CCLE Cell Line Gene Expression Profiles 1.0 1.77082 isoxsuprine-1485 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null ZNF143_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-RM2N-0008-SM-48FF3 GTEx Tissue Sample Gene Expression Profiles 1.0 0.919804 dyclonine-7022 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me3_Caco-2_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null HCC1806 GDSC Cell Line Gene Expression Profiles 1.0 1.56887 KAT2B_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null OTX2_silencing_GDS4472_136_human_D425 medulloblastoma (MB) cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null GTEX-U3ZN-0826-SM-4DXSZ GTEx Tissue Sample Gene Expression Profiles 1.0 0.990418 parahippocampal gyrus, right, bank of the cos Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.849704 thiethylperazine-6154 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null MDAPCA2B CCLE Cell Line Gene Expression Profiles 1.0 2.71821 CPSF2 Pathway Commons Protein-Protein Interactions 1.0 null hsa-miR-3922-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.2992 C-33 A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles 1.0 null EEF1B2 Pathway Commons Protein-Protein Interactions 1.0 null CTCF_HepG2_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCC1419 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.77738 Bladder Urothelial Carcinoma_BLCA_TCGA-ZF-AA4W-01A-12R-A38B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-OXRO-0011-R9A-SM-3NB1X GTEx Tissue Sample Gene Expression Profiles -1.0 -1.22049 IRF3_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null heterocycle biosynthetic process GO Biological Process Annotations 2015 1.0 null oxoacid metabolic process GO Biological Process Annotations 2015 1.0 null avian pallium TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null ventrolateral prefrontal cortex_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.918591 YY1_K562_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null STAT3_MCF 10A_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null PML_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null olfactory part of entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.23814 GTEX-XOTO-0526-SM-4B662 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.00877 mammary gland TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.737618 anterior (rostral) cingulate (medial prefrontal) cortex_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.86144 erythromycin-1510 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-WFJO-0005-SM-3GIKY GTEx Tissue Sample Gene Expression Profiles -1.0 -1.58527 H3K4me3_epithelial cell of proximal tubule_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_megakaryocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null sirolimus-5927 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H2AFZ_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BRCA1 ENCODE Transcription Factor Targets 1.0 null HCC1937 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.86629 MRPS9 Pathway Commons Protein-Protein Interactions 1.0 null hsa-miR-4757-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.55165 Perturb_12941_KO_UBE2T_SRP312031 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -2.17941 Penis_Foreskin_Keratinocyte_Primary_Cells_skin02 Roadmap Epigenomics Cell and Tissue Gene Expression Profiles 1.0 1.11396 primary auditory cortex (core)_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.8111 H3K4me2_keratinocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null cinchocaine-4149 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null EIF3F Pathway Commons Protein-Protein Interactions 1.0 null H3K4me1_liver_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null BFTC-905 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.31597 H3K9ac_HepG2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null NAD HMDB Metabolites of Enzymes 1.0 null POLR2A_MCF 10A_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null chlorpromazine-5577 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null choroid disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 1.02397 sparteine-2134 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null TRPV4_DEPLETION_GDS4851_89_mouse_3T3-F442A adipocytes GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null MRPL48 Pathway Commons Protein-Protein Interactions 1.0 null NCIH1781 CCLE Cell Line Gene CNV Profiles 1.0 2.44774 Infralimbic area, layer 5 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.10858 primary auditory cortex (core)_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.1423 NCI-H1838 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.894509 schizophrenia DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.164149 erythrocyte TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.398735 SGPL1 Pathway Commons Protein-Protein Interactions 1.0 null H3K27ac_liver_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me2_H1-hESC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-T6MN-0526-SM-32PMS GTEx Tissue Sample Gene Expression Profiles -1.0 -1.00246 POLR2A_GM12891_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null principal sensory nucleus of trigeminal nerve, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.27102 POLR2A_GM18505_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BL2606 (PPARGC1B) NURSA Protein Complexes 1.0 null skeletal system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.056656 H3K4me3_Panc1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null HMY-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.896089 nervous system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.04465 Head and Neck squamous cell carcinoma_HNSC_TCGA-HD-A6I0-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Pallidum, medial region Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.11744 cutis laxa DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 1.48208 ikarugamycin-974 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H3K4me3_mammary epithelial cell_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null GTEX-S341-0226-SM-2XCAX GTEx Tissue Sample Gene Expression Profiles 1.0 0.920325 PAX5_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null UTP3 Pathway Commons Protein-Protein Interactions 1.0 null SRSF7 Pathway Commons Protein-Protein Interactions 1.0 null CHAGO-K-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.846548 Kidney renal clear cell carcinoma_KIRC_TCGA-AK-3447-01A-01R-1766-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCI-H1693 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.874739 mantle zone of r5BI Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.37191 SK-N-AS Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.15559 periventricular stratum of r5BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.43163 POU2F2 ENCODE Transcription Factor Targets 1.0 null H3K4me3_endothelial cell of umbilical vein_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null breast TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.311145 GTEX-V1D1-1926-SM-4JBGX GTEx Tissue Sample Gene Expression Profiles 1.0 3.02789 TCF12_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me2_A549_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null U-266 GDSC Cell Line Gene Expression Profiles -1.0 -1.84957 adipose tissue TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.128889 HMGN3_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Rectum adenocarcinoma_READ_TCGA-AF-3911-01A-01R-1736-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TOP2B_drug inhibition_GSE1417_341_human_HeLa GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null GTEX-OXRO-0006-SM-2I5EM GTEx Tissue Sample Gene Expression Profiles -1.0 -2.45958 HDAC2_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null inferolateral temporal cortex (area TEv, area 20)_19 yrs_F_12832 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.994106 BAG6 Pathway Commons Protein-Protein Interactions 1.0 null HNRNPAB Pathway Commons Protein-Protein Interactions 1.0 null FLI1_01_13 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.61466 CTCF_MEL cell line_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null U251MG CCLE Cell Line Gene CNV Profiles -1.0 -1.64378 Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A5BT-01A-11R-A26T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GEMIN5 Pathway Commons Protein-Protein Interactions 1.0 null Secondary motor area, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.53663 PNU-0293363-6573 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null intermediate stratum of 5BL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.42862 dorsolateral prefrontal cortex_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.958987 superficial stratum of AOB Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.98744 Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5703-01A-11R-1541-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2A_erythroblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null superficial stratum of r4Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.39354 MYOG ENCODE Transcription Factor Targets 1.0 null FUBP1 Pathway Commons Protein-Protein Interactions 1.0 null flight muscle TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.777325 RCOR1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null LXFL529 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.846548 GTEX-PWO3-0005-SM-2I5FS GTEx Tissue Sample Gene Expression Profiles -1.0 -1.88069 POLR2AphosphoS5_GM12892_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PRMT6 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-N7MT-1926-SM-3LK5N GTEx Tissue Sample Gene Expression Profiles -1.0 -0.825425 GTEX-O5YT-1626-SM-32PK6 GTEx Tissue Sample Gene Expression Profiles -1.0 -2.05839 MAX ENCODE Transcription Factor Targets 1.0 null troglitazone-1657 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Lung squamous cell carcinoma_LUSC_TCGA-LA-A446-01A-21R-A24Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null OVMANA Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.896002 MRPS35 Pathway Commons Protein-Protein Interactions 1.0 null NELFE_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null FOS_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-Q2AG-0005-SM-33HBX GTEx Tissue Sample Gene Expression Profiles -1.0 -0.99385 PKP3 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_liver_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null RBBP5_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-R55E-2726-SM-48FCX GTEx Tissue Sample Gene Expression Profiles 1.0 1.16234 GTEX-QMRM-0005-SM-3NB2A GTEx Tissue Sample Gene Expression Profiles -1.0 -0.849685 H3K4me1_limb_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null BL8736 (PRCC) NURSA Protein Complexes 1.0 null H3K4me1_CH12.LX_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null MAX_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null dorsolateral prefrontal cortex_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.823962 Weight Loss CTD Gene-Disease Associations 1.0 1.53989 non-small cell lung cancer cell line ProteomicsDB Cell Type and Tissue Protein Expression Profiles -1.0 -1.52333 H3K27ac_brain_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null valproic acid-1639 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null disease of mental health DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.04386 Sarcoma_SARC_TCGA-X6-A7W8-01A-21R-A355-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_fibroblast of skin of abdomen_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null boldine-2148 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me3_olfactory bulb_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null COV318 CCLE Cell Line Gene CNV Profiles -1.0 -2.03197 HNRNPA0 Pathway Commons Protein-Protein Interactions 1.0 null CTCF_liver_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null JUN ENCODE Transcription Factor Targets 1.0 null brain TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.0758 mediodorsal nucleus of thalamus_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.42669 POLR2AphosphoS5_PFSK-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-PVOW-0006-SM-3NMB8 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.859813 arcuate nucleus of hypothalamus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.921036 H3K9ac_ES-Bruce4_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null cellular amino acid metabolic process GO Biological Process Annotations 2015 1.0 null GTEX-TSE9-3026-SM-3DB76 GTEx Tissue Sample Gene Expression Profiles 1.0 1.0535 superficial stratum of r2Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.41598 MXI1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Heart Defects, Congenital CTD Gene-Disease Associations 1.0 1.12805 H3K4me3_G1E-ER4_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null GTEX-T5JC-2426-SM-3NMDB GTEx Tissue Sample Gene Expression Profiles 1.0 1.40548 choroid plexus of the fourth ventricle Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.71727 L-Proline HMDB Metabolites of Enzymes 1.0 null HCC1500 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.61549 hsa-miR-1281 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.0155 organic cyclic compound metabolic process GO Biological Process Annotations 2015 1.0 null NADP HMDB Metabolites of Enzymes 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-DV-A4VX-01A-11R-A266-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MAX_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null MDA-MB-468 GDSC Cell Line Gene Expression Profiles -1.0 -1.70928 CTCF_keratinocyte_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null fat body TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.5228 HCC-1937 cell ProteomicsDB Cell Type and Tissue Protein Expression Profiles 1.0 0.871181 SP2_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null PANC 08.13 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.28819 HNRNPUL1 Pathway Commons Protein-Protein Interactions 1.0 null Perturb_3266_KO_mir181a1/mir181b1_SRP015851 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -7.3273 SALE CCLE Cell Line Gene Expression Profiles -1.0 -2.13245 HCA-7 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles 1.0 null skeletalmuscle_c HPA Tissue Sample Gene Expression Profiles -1.0 -1.42815 H3K4me3_H1-hESC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-R55E-0826-SM-2TC5M GTEx Tissue Sample Gene Expression Profiles 1.0 1.31681 H3K4me1_placenta_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_cardiac mesoderm_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null CTCF_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-CC-A5UD-01A-11R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2AphosphoS5_PFSK-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null MYC_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null CD8_Naive_Primary_Cells Roadmap Epigenomics Cell and Tissue Gene Expression Profiles -1.0 -0.856587 GTEX-SIU7-0426-SM-2XCDX GTEx Tissue Sample Gene Expression Profiles -1.0 -0.956739 SP in rostral midinferior temporal cortex (area 36) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.931245 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-DG-A2KJ-01A-11R-A32Y-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-QESD-1626-SM-2S1RB GTEx Tissue Sample Gene Expression Profiles -1.0 -1.70144 xamoterol-5363 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-RWS6-0326-SM-2XCAP GTEx Tissue Sample Gene Expression Profiles -1.0 -0.890794 SNRPB2 Pathway Commons Protein-Protein Interactions 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-EE-A29C-06A-21R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hippocampus (hippocampal formation)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.824503 melatonin-2431 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null ricinine-6206 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null HCC2279 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.2033 HES3_KO_GSE64449_186_mouse_Min6 GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null H3K4me2_HeLa-S3_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null CTCF_SK-N-SH_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-35-4122-01A-01R-1107-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SF268 GDSC Cell Line Gene Expression Profiles -1.0 -1.57093 SNRPD1 Pathway Commons Protein-Protein Interactions 1.0 null Lung adenocarcinoma_LUAD_TCGA-69-8255-01A-11R-2287-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_MCF-7_hg19_8 ENCODE Transcription Factor Binding Site Profiles 1.0 null AOB, outer plexiform layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.08505 pipenzolate bromide-6821 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null SMC3 ENCODE Transcription Factor Targets 1.0 null H3K4me3_brain microvascular endothelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null cerebellar cortex_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.54216 skeletalmuscle_e HPA Tissue Sample Gene Expression Profiles -1.0 -1.50345 lincomycin-2380 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null MRPS34 Pathway Commons Protein-Protein Interactions 1.0 null hsa-miR-4788 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.0155 ELF1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null FAM120A Pathway Commons Protein-Protein Interactions 1.0 null Pancreatic adenocarcinoma_PAAD_TCGA-L1-A7W4-01A-12R-A36G-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2AphosphoS5_G1E_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H2AFZ_keratinocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POU2F2_GM12878_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-QESD-0626-SM-2I5G4 GTEx Tissue Sample Gene Expression Profiles 1.0 0.994403 EP300_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null JUND_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XLM4-0011-R3B-SM-4AT6E GTEx Tissue Sample Gene Expression Profiles 1.0 1.6547 H3K4me1_G1E-ER4_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null CREB1_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Secondary motor area, layer 5 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.71817 posteroventral (inferior) parietal cortex_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.39158 SHSY5Y CCLE Cell Line Gene Expression Profiles -1.0 -1.5226 POLR2A_GM12878_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null terguride-5400 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null prochlorperazine-2675 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null CCAR1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-RM2N-1326-SM-48FCW GTEx Tissue Sample Gene Expression Profiles 1.0 1.10035 CTCF_GM12872_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-VJYA-0426-SM-3GIJK GTEx Tissue Sample Gene Expression Profiles 1.0 0.900696 PAX5 ENCODE Transcription Factor Targets 1.0 null r3 pontine raphe nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.56983 GTEX-PLZ4-0926-SM-2S1OI GTEx Tissue Sample Gene Expression Profiles -1.0 -1.49727 POLR2A_GM15510_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SIN3A_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null layer 3 of AOD cortex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.24496 melanoma DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.157929 dorsolateral prefrontal cortex_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.08296 CTCF_GM12873_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null beclometasone-3001 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-WFG7-2226-SM-3GIKP GTEx Tissue Sample Gene Expression Profiles -1.0 -0.94168 OB inner plexiform layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.03034 CSTF3 Pathway Commons Protein-Protein Interactions 1.0 null Prostate adenocarcinoma_PRAD_TCGA-KK-A59Z-01A-12R-A26U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null FOXP2_PFSK-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null nicergoline-6251 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H3K4me3_fibroblast of lung_hg19_4 ENCODE Histone Modification Site Profiles 1.0 null sp3_17923686_e12dot5_heart_lof_mouse_gpl1261_gds3058 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations -1.0 -0.862289 GATA2_G1E-ER4_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null YY1_SK-N-SH_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_A549_hg19_4 ENCODE Histone Modification Site Profiles 1.0 null (-)-atenolol-5325 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null NADPH HMDB Metabolites of Enzymes 1.0 null CTCF_fibroblast of dermis_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MRPL9 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_MEL cell line_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null cefmetazole-7222 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null RCOR1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null cerebellar cortex_11 yrs_F_12289 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.47949 inferolateral temporal cortex (area TEv, area 20)_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.43515 GTEX-WXYG-0226-SM-3NB2Y GTEx Tissue Sample Gene Expression Profiles 1.0 1.95395 pontobulbar body Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.54451 CEBPZ_02_05 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.59771 CHD4_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H23 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.894509 levamisole-7450 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null POLR2AphosphoS5_neural cell_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null MMAC-SF COSMIC Cell Line Gene Mutation Profiles 1.0 null LCLC-97TM1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.24123 YY1_HCT116_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_fibroblast of pedal digit skin_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_astrocyte of the cerebellum_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null SIN3A_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCC4011 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.19248 GTEX-P44H-0008-SM-48TDW GTEx Tissue Sample Gene Expression Profiles 1.0 1.42539 H3K4me3_fibroblast of foreskin _hg19_1 ENCODE Histone Modification Site Profiles 1.0 null RPL27A Pathway Commons Protein-Protein Interactions 1.0 null GTEX-REY6-1226-SM-48FDR GTEx Tissue Sample Gene Expression Profiles 1.0 1.46774 Perturb_13999_KD_MIR1271_SRP256886 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 2.35712 MDAMB453 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 1.31632 intermediate stratum of OB Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.25053 0179445-0000-3733 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-OOBK-2626-SM-2HMKY GTEx Tissue Sample Gene Expression Profiles 1.0 1.70987 sulpiride-1887 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null RPL27 Pathway Commons Protein-Protein Interactions 1.0 null OCIMY5 CCLE Cell Line Gene CNV Profiles 1.0 1.37367 adult TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.278955 trifluoperazine-2684 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null POLR2AphosphoS5_Panc1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null layer 1 of FCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.42799 NFYB ENCODE Transcription Factor Targets 1.0 null GTEX-SN8G-0006-SM-32PLD GTEx Tissue Sample Gene Expression Profiles -1.0 -1.87797 gyrate atrophy DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 1.27781 H2AFZ_osteoblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_fibroblast of villous mesenchyme_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null EP300 ENCODE Transcription Factor Targets 1.0 null SUM185PE Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -0.88102 H3K4me3_heart_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null FOS_MCF 10A_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-S7SE-0011-R10A-SM-2XCDF GTEx Tissue Sample Gene Expression Profiles 1.0 0.967118 Prostate adenocarcinoma_PRAD_TCGA-YL-A8HM-01A-11R-A36G-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZKSCAN1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null cellular process GO Biological Process Annotations 2015 1.0 null MDAMB436 CCLE Cell Line Gene CNV Profiles 1.0 1.92742 hsa-miR-635 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.07142 SNU119 CCLE Cell Line Gene Expression Profiles 1.0 1.34733 H3K4me3_GM12878_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null LNCAP Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.8092 SOX17 ChEA Transcription Factor Targets 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A45Q-01A-11R-A24H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null risperidone-7449 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null periventricular stratum of r10BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.08929 EGR1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-U412-0006-SM-3DB8J GTEx Tissue Sample Gene Expression Profiles -1.0 -1.90077 Mesothelioma_MESO_TCGA-SH-A7BH-01A-11R-A34F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-X8HC-0626-SM-4E3HQ GTEx Tissue Sample Gene Expression Profiles -1.0 -0.887676 TSR1 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-NL4W-0006-SM-2I3GH GTEx Tissue Sample Gene Expression Profiles -1.0 -2.60067 H3K4me3_kidney epithelial cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-PSDG-0426-SM-2S1OF GTEx Tissue Sample Gene Expression Profiles -1.0 -1.22862 Head and Neck squamous cell carcinoma_HNSC_TCGA-P3-A6T6-01A-11R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_cortical plate_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null SP1_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PLK1 Pathway Commons Protein-Protein Interactions 1.0 null CCT3 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-XLM4-3026-SM-4AT6L GTEx Tissue Sample Gene Expression Profiles 1.0 1.45435 RBL1_KO_GDS1931_740_mouse_Neurospheres (MG-430A) GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null ELF1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ATP5H Pathway Commons Protein-Protein Interactions 1.0 null BCLAF1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K79me2_HepG2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null M07E CCLE Cell Line Gene CNV Profiles 1.0 1.358 Hydrogen Ion HMDB Metabolites of Enzymes 1.0 null mitochondrion COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.474018 SG in caudal entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.16697 Proteinuria CTD Gene-Disease Associations 1.0 1.21076 H2AFZ_astrocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NOP56 Pathway Commons Protein-Protein Interactions 1.0 null LIN28B_01_153 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.59151 TBP_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-FG-A6IZ-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HT-144 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.1703 GTEX-RU1J-1926-SM-2TF6S GTEx Tissue Sample Gene Expression Profiles -1.0 -0.859177 pc3 HPA Cell Line Gene Expression Profiles 1.0 1.55512 III, left, lateral hemisphere Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.992701 gametocyte TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.165696 posteroventral (inferior) parietal cortex_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.75236 GTEX-XAJ8-1026-SM-47JY9 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.46886 JUND ENCODE Transcription Factor Targets 1.0 null vinpocetine-7213 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H2AFZ_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null thiamphenicol-1704 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null NOP9 Pathway Commons Protein-Protein Interactions 1.0 null SNU-387 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.874739 MXI1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCC364 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.844792 SERBP1 Pathway Commons Protein-Protein Interactions 1.0 null morantel-7250 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-S32W-0126-SM-4AD61 GTEx Tissue Sample Gene Expression Profiles 1.0 1.02294 Perturb_12618_KD_SREBF2_SRP281894 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 8.86055 HCC2279 CCLE Cell Line Gene CNV Profiles 1.0 2.44995 primary somatosensory cortex (area S1, areas 3,1,2)_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.95183 MAX_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null BL2465 (NCOA7) NURSA Protein Complexes 1.0 null r11 alar plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.70407 theophylline-4812 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null trifluoperazine-7420 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null CTCF_HCT116_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null PAX5_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TEAD4_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-Q2AH-0526-SM-2I3ED GTEx Tissue Sample Gene Expression Profiles -1.0 -0.890722 HCC1482 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.984112 SRP14 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-OHPM-0326-SM-33HCA GTEx Tissue Sample Gene Expression Profiles -1.0 -1.18694 SRSF2 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-WH7G-1726-SM-4LVKY GTEx Tissue Sample Gene Expression Profiles 1.0 1.11845 GTEX-PVOW-0011-R1A-SM-32PL6 GTEx Tissue Sample Gene Expression Profiles 1.0 1.0104 hsa-miR-3165 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.07142 POLR2A_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null RPL31 Pathway Commons Protein-Protein Interactions 1.0 null eGFP-JUND_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null mantle zone of r2Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.12987 SNU5 CCLE Cell Line Gene Expression Profiles 1.0 1.50245 oxidoreductase activity, acting on the ch-nh group of donors, nad or nadp as acceptor GO Molecular Function Annotations 2015 1.0 null GTEX-U3ZN-0006-SM-3DB7Y GTEx Tissue Sample Gene Expression Profiles -1.0 -0.877916 dorsolateral prefrontal cortex_37 yrs_M_12303 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.75884 cerebellar cortex_15 yrs_M_12299 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.4744 JJN3 CCLE Cell Line Gene Expression Profiles 1.0 1.78794 alexidine-4721 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null HIST1H1B Pathway Commons Protein-Protein Interactions 1.0 null STAT6 MotifMap Predicted Transcription Factor Targets 1.0 null ASPH Pathway Commons Protein-Protein Interactions 1.0 null fulvestrant-6955 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H3K4me3_skeletal muscle cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null CALU-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.896089 fluphenazine-7234 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null H3K4me3_C2C12_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null edrophonium chloride-5001 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null ZBTB7A_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_HeLa-S3_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCC4017 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.896089 Prestwick-981-7464 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null outer CP in caudal perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.10194 GTEX-QEL4-0926-SM-3GAD1 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.875076 POLR2A_GM12891_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null EN COSMIC Cell Line Gene Mutation Profiles 1.0 null SIN3A_Panc1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ATRFLOX Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.947751 collagen trimer COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.264581 MOLT-4 COSMIC Cell Line Gene Mutation Profiles 1.0 null UIMC1 Pathway Commons Protein-Protein Interactions 1.0 null NCAPD3 Pathway Commons Protein-Protein Interactions 1.0 null POLR2A_A549_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null FOXA1_HepG2_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null IZ in lateral temporal-occipital cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.04875 GTEX-T5JC-0626-SM-3NMA6 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.53879 KDM5A_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CardiacMyocytes BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 1.64209 RPS18 Pathway Commons Protein-Protein Interactions 1.0 null H3K4me1_Neurosphere Cultured Cells Ganglionic Eminence Derived Roadmap Epigenomics Histone Modification Site Profiles 1.0 null SAP30_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5702-01A-11R-1541-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null DEL CCLE Cell Line Gene Expression Profiles -1.0 -1.55037 YY1_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_K562_hg19_8 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-RNOR-0011-R4A-SM-3GAD3 GTEx Tissue Sample Gene Expression Profiles 1.0 0.916444 SF3B1 Pathway Commons Protein-Protein Interactions 1.0 null KURAMOCHI CCLE Cell Line Gene CNV Profiles 1.0 1.48118 NCIH1781 CCLE Cell Line Gene Expression Profiles 1.0 1.52087 CHD2_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27ac_astrocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null U20S BioGPS Cell Line Gene Expression Profiles 1.0 1.89634 CTCF_GM10248_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_fibroblast of upper leg skin_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-S32W-1326-SM-4AD5Q GTEx Tissue Sample Gene Expression Profiles 1.0 1.0009 CTCF_keratinocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H820 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.47137 RPL3 Pathway Commons Protein-Protein Interactions 1.0 null POLR2AphosphoS2_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_bronchial epithelial cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null metabolic process GO Biological Process Annotations 2015 1.0 null NCI-H1781 COSMIC Cell Line Gene CNV Profiles 1.0 2.41451 CTCF_skin fibroblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null clofazimine-5642 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-OHPL-2426-SM-48TDN GTEx Tissue Sample Gene Expression Profiles 1.0 1.51611 GTEX-NPJ8-0007-SM-2D7VX GTEx Tissue Sample Gene Expression Profiles -1.0 -2.7466 Skin Cutaneous Melanoma_SKCM_TCGA-ER-A19J-06A-11R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-S341-1826-SM-3K2AB GTEx Tissue Sample Gene Expression Profiles -1.0 -0.944879 small molecule biosynthetic process GO Biological Process Annotations 2015 1.0 null H3K27ac_liver_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null TFAP2A JASPAR Predicted Transcription Factor Targets 1.0 null glutamine family amino acid biosynthetic process GO Biological Process Annotations 2015 1.0 null CSDE1 Pathway Commons Protein-Protein Interactions 1.0 null spiradoline-3901 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-R55E-0526-SM-2TC6B GTEx Tissue Sample Gene Expression Profiles -1.0 -1.48617 ventrolateral prefrontal cortex_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.0318 H3K4me3_A549_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null AIMP2 Pathway Commons Protein-Protein Interactions 1.0 null GTEX-XUZC-0005-SM-4BOQ8 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.30222 DRG1 Pathway Commons Protein-Protein Interactions 1.0 null H2BK120ac_H9 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null erythroblast TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.177033 TAF1_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-64-1676-01A-01R-0946-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null minocycline-2405 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-SNMC-0926-SM-4DM5U GTEx Tissue Sample Gene Expression Profiles 1.0 2.23801 EP300_GM12878_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-UPIC-0926-SM-4IHLV GTEx Tissue Sample Gene Expression Profiles 1.0 1.04551 C1QBP Pathway Commons Protein-Protein Interactions 1.0 null CHD1_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_skeletal muscle myoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null HADHA Pathway Commons Protein-Protein Interactions 1.0 null GTEX-QEG5-0006-SM-2I5FZ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.06771 HCC1428 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -3.21591 GTF3C1 Pathway Commons Protein-Protein Interactions 1.0 null glafenine-7418 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Hepatitis, Autoimmune_Hepatic Tissue_GSE867 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -1.22705 Perturb_3958_KO_GSDMB_SRP350967 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -4.53236 posterior (caudal) superior temporal cortex (area 22c)_17 pcw_F_12880 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.10907 thioproperazine-6265 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null urinary tract TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.063958 procarbazine-3533 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null hsa-miR-4437 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.0155 ARID3A_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-T5JC-0326-SM-4DM5C GTEx Tissue Sample Gene Expression Profiles -1.0 -1.00707 r3 part of dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.02635 H3K9ac_Pancreatic Islets Roadmap Epigenomics Histone Modification Site Profiles 1.0 null H3K4me3_fibroblast of villous mesenchyme_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7409-01A-31R-2232-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-S3XE-0006-SM-3K2AA GTEx Tissue Sample Gene Expression Profiles -1.0 -1.24385 GTEX-TKQ1-0006-SM-33HBI GTEx Tissue Sample Gene Expression Profiles -1.0 -1.07056 TCF7-22412390-EML-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null CTCF_embryonic fibroblast_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Ventral cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.03941 POLR2A_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-TSE9-0726-SM-3DB8C GTEx Tissue Sample Gene Expression Profiles -1.0 -0.989029 Perturb_12848_KO_Kdm4a_SRP192379 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -4.29261 Perturb_4221_KO_Utx_SRP117662 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 1.4269 GTEX-SJXC-2026-SM-4DM6N GTEx Tissue Sample Gene Expression Profiles 1.0 1.11504 GTEX-XPVG-0006-SM-4B65Z GTEx Tissue Sample Gene Expression Profiles -1.0 -1.09207 MDAMB468 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -1.15835 H3K4me1_small intestine_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null SF3B5 Pathway Commons Protein-Protein Interactions 1.0 null intermediate stratum of r4Lim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.29965 nervous system TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.0758 H2AFZ_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null DDX47 Pathway Commons Protein-Protein Interactions 1.0 null etofylline-2256 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null RPSA Pathway Commons Protein-Protein Interactions 1.0 null H3K4me3_SK-N-SH_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null vitelline membrane TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 1.07132 H3K27ac_myotube_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null COLO-205 GDSC Cell Line Gene Expression Profiles -1.0 -2.02724 H3K4me3_HeLa-S3_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null r7 part of the dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.09547 ventrolateral prefrontal cortex_16 pcw_M_12287 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.941828 ventrolateral prefrontal cortex_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.871292 USF2_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WVLH-0006-SM-3MJF7 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.29154 NCI-H1882 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -3.41509 Liver hepatocellular carcinoma_LIHC_TCGA-DD-A3A3-01A-11R-A22L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-K4-A4AC-01A-21R-A26T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H2AFZ_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RPS6 Pathway Commons Protein-Protein Interactions 1.0 null posterior (caudal) superior temporal cortex (area 22c)_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 2.12493 OCUB-M GDSC Cell Line Gene Expression Profiles 1.0 2.74364 H3K27ac_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-QK-A6IH-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null allantoin-5471 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null POLR2A_HEK293_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null COLO 792 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.852048 RPL38 Pathway Commons Protein-Protein Interactions 1.0 null cinnarizine-7174 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null CHD7_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-49-4507-01A-01R-1206-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-WH7G-1926-SM-4LVMM GTEx Tissue Sample Gene Expression Profiles 1.0 1.12143 PUS1 Pathway Commons Protein-Protein Interactions 1.0 null urogenital system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.238706 H3K4me3_skeletal muscle cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null medial part of r10B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.91153 RERF-LC-KJ Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.894509 H1FX Pathway Commons Protein-Protein Interactions 1.0 null MYC_MCF 10A_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null primary visual cortex (striate cortex, area V1/17)_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.987128 secondary oocyte TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.782725 HCFC1_ES-E14_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLD1 Pathway Commons Protein-Protein Interactions 1.0 null MKN1 CCLE Cell Line Gene CNV Profiles 1.0 1.38427 DDX21 Pathway Commons Protein-Protein Interactions 1.0 null layer 3 of FCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.16134 SG in caudal perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.25522 Kidney Chromophobe_KICH_TCGA-KO-8404-01A-11R-2315-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K27ac_cortical plate_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-NPJ8-1626-SM-2HMIY GTEx Tissue Sample Gene Expression Profiles -1.0 -1.10823 EFM192A CCLE Cell Line Gene Expression Profiles 1.0 1.3642 H3K4me3_HCT116_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null plant TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.25259 Skin Cutaneous Melanoma_SKCM_TCGA-FS-A1ZQ-06A-11R-A18U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-94-7033-01A-11R-1949-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null atractyloside-2573 CMAP Signatures of Differentially Expressed Genes for Small Molecules 1.0 null CTCF_myotube_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RH30 CCLE Cell Line Gene CNV Profiles -1.0 -1.33373 r1 part of principal trigeminal sensory nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.28539 sulfamonomethoxine-2742 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null cerebellar cortex_10 mos_M_12977 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -3.51607 GSK3A_KD_GDS4305_182_human_THP-1 acute myeloid leukemia cell line GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null acemetacin-7442 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null alimentary canal TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.057634 ST486 GDSC Cell Line Gene Expression Profiles 1.0 1.49657 HNRNPDL Pathway Commons Protein-Protein Interactions 1.0 null estradiol_homo sapiens_gpl570_gse23610 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null POLR2A_limb_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null anterior (rostral) cingulate (medial prefrontal) cortex_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.966606 enilconazole-6518 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null LNCaP-Clone-FGC GDSC Cell Line Gene Expression Profiles 1.0 1.46967 mantle zone of AOB Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.50952 mediodorsal nucleus of thalamus_10 mos_M_12977 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.12967 GTEX-UTHO-3126-SM-3P5ZB GTEx Tissue Sample Gene Expression Profiles 1.0 1.0115 III, left, paravermis Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.09586 GTEX-OXRN-2626-SM-48TBX GTEx Tissue Sample Gene Expression Profiles 1.0 0.837983 GTEX-NL3H-0011-R11A-SM-2I3E6 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.67576 LOUCY CCLE Cell Line Gene Expression Profiles -1.0 -1.55379 DPY30 Pathway Commons Protein-Protein Interactions 1.0 null Brain Lower Grade Glioma_LGG_TCGA-CS-6669-01A-11R-1896-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cytoplasmic part LOCATE Predicted Protein Localization Annotations 1.0 null MYC_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me2_myocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null BACH1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MYC_MCF-7_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null organic substance metabolic process GO Biological Process Annotations 2015 1.0 null emboliform nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.834073 H2AK5ac_H1 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null gabapentin-7229 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null TCF3_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_myotube_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null bonemarrow_5a HPA Tissue Sample Gene Expression Profiles -1.0 -2.79212 Cochlear nuclei Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.37882 PRRC2C Pathway Commons Protein-Protein Interactions 1.0 null H3K4me1_keratinocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RPL22 Pathway Commons Protein-Protein Interactions 1.0 null NADH HMDB Metabolites of Enzymes 1.0 null H3K4me1_GM12878_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null SIN3A_H1-hESC_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null MYC_MCF-7_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-QESD-0006-SM-2I5G6 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.936328 nortriptyline-6003 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null MYC_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null MXI1_IMR-90_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_fibroblast of lung_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null MYC_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null THAP1_02_46 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.58784 H3K4me3_brain microvascular endothelial cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null r5 part of basointermediate reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.4577 GTEX-Q2AG-1126-SM-48U1P GTEx Tissue Sample Gene Expression Profiles 1.0 0.931947 HCC1195 CCLE Cell Line Gene CNV Profiles 1.0 1.37146 GTEX-T2YK-0005-SM-32QOV GTEx Tissue Sample Gene Expression Profiles -1.0 -1.15354 H3K4me3_embryonic fibroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null adult stem cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.061964 H3K4me1_brain_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null mouth TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.065043 mantle zone of AOD Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.71362 CTCF_K562_hg19_6 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K79me2_HeLa-S3_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null pyrroline-5-carboxylate reductase activity GO Molecular Function Annotations 2015 1.0 null H2AFZ_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SU-DHL-5 COSMIC Cell Line Gene Mutation Profiles 1.0 null GTEX-P78B-0005-SM-2I5GM GTEx Tissue Sample Gene Expression Profiles -1.0 -0.92459 NCI-H1155 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.846548 SARS-CoV MA15_Day4-C57BL6_None_GSE51386 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 1.74236 AtrioventricularNode BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.78729 NELFE Pathway Commons Protein-Protein Interactions 1.0 null NCVADR RES BioGPS Cell Line Gene Expression Profiles 1.0 1.00373 LU99 CCLE Cell Line Gene CNV Profiles 1.0 1.47565 FUBP3 Pathway Commons Protein-Protein Interactions 1.0 null blood GTEx Tissue Gene Expression Profiles -1.0 -0.895388 PES1 Pathway Commons Protein-Protein Interactions 1.0 null organelle part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.040374 cerebral lobe TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null fluphenazine-1017 CMAP Signatures of Differentially Expressed Genes for Small Molecules -1.0 null nucleus subceruleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.2695 RPS27 Pathway Commons Protein-Protein Interactions 1.0 null