association	dataset	threshold value	standardized value
SOX14	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.9938
EVX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.9588
PAX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.4003
NR2F2_MCF-7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-56-8083-01A-11R-2247-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NR2F2	ENCODE Transcription Factor Targets	1.0	null
NCI-H441	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.858164
negative regulation of non-canonical NF-kappaB signal transduction	GO Biological Process Annotations 2025	1.0	null
ZNF354A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	143.055
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.27735
PMC8423434-mmc7.xlsx-SOX2_HENSM-Genes_n_2733_SOX2	Rummagene Transcription Factor Associations 2026	1.0	null
inferior temporal gyrus, left, bank of the its	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.05259
dexamethasone_homo sapiens_gpl6244_gse20963	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Gingival epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.766
LHX9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.1509
ZNF384	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	122.839
Sarcoma_SARC_TCGA-QQ-A5VB-01A-11R-A36F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SNU489	CCLE Cell Line Gene CNV Profiles	-1.0	-1.80905
EZH2_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-TN-A7HI-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CR-7371-01A-11R-2016-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Ejg	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.169
salivary gland	GTEx Tissue Gene Expression Profiles	-1.0	-0.897864
Lung squamous cell carcinoma_LUSC_TCGA-43-A56U-01A-11R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
J-774 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.382
C-33 A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.99106
CDX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.3713
TP53BP1_KD_GSE54268_669_human_MCF-10A	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
Dehydrodolichyl diphosphate synthase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.223
Activating signal cointegrator 1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.988
membrane-bounded organelle	GO Cellular Component Annotations 2015	1.0	null
POU6F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.8781
GLI3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.4674
Prostate adenocarcinoma_PRAD_TCGA-HC-7078-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Sarcoma_SARC_TCGA-K1-A42X-02A-11R-A24X-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SNU503	CCLE Cell Line Gene CNV Profiles	1.0	2.0372
fusiform gyrus, left, lateral bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.11204
NFYB	ENCODE Transcription Factor Targets	1.0	null
adrenal gland	HPA Tissue Protein Expression Profiles	1.0	0.806563
PHOX2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	51.3194
negative regulation of defense response	GO Biological Process Annotations 2025	1.0	null
Distal tubular epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.543
SNU-668	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.966354
p65	GeneRIF Biological Term Annotations	1.0	null
POU2F1::SOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	82.432
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A3MV-06A-11R-A21D-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
negative regulation of NLRP3 inflammasome complex assembly	GO Biological Process Annotations 2023	1.0	null
GSE226770_1_v_6_atrx_human	RummaGEO Gene Perturbation Signatures	1.0	null
bone marrow	HPA Tissue Protein Expression Profiles	-1.0	-1.70377
NKX6-1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.3092
RI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.13085
496100648_PCx_no dementia_no TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.35705
cellular_component	GO Cellular Component Annotations 2015	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-MI-A75G-01A-11R-A32O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
IKKalpha-IKKalpha complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.601
PDX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.5831
496100336_TCx_no dementia_no TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.43727
HOXA10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.5973
EN1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.6495
HOXA3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.751
RCOR1_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
pineal gland	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.28109
SAP30_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Piriform area	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.185
CEBPE	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.3802
various	GeneRIF Biological Term Annotations	1.0	null
pyrin	GeneRIF Biological Term Annotations	1.0	null
ZNF667	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.099
SOX2-19829295-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
planum temporale, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.903892
Lung adenocarcinoma_LUAD_TCGA-50-5946-01A-11R-1755-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
pop2	GeneRIF Biological Term Annotations	1.0	null
HA1E	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.848
GSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	12.9119
fallopian tube	GTEx Tissue Gene Expression Profiles	1.0	1.67684
FOXC1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	58.6788
HOXB5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.2641
SNU-398	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05104
MSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.7038
496100578_FWM_possible Alzheimer's disease_no TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.43054
inhibits	GeneRIF Biological Term Annotations	1.0	null
rela	GeneRIF Biological Term Annotations	1.0	null
RUNX2-22187159-PCA-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-92-8065-01A-11R-2247-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
A-375	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09826
HCC630	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.34584
Rectum adenocarcinoma_READ_TCGA-AF-5654-01A-01R-1660-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PPARD	ChEA Transcription Factor Targets	1.0	null
THP-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.433
KDM5A_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DB	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.27735
soft tissue	HPA Tissue Protein Expression Profiles	1.0	0.806563
Pelvic Organ Prolapse	DisGeNET Gene-Disease Associations	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-LA-A446-01A-21R-A24Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MEF2D	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	56.3623
H3K9me1_K562_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-NC-A5HP-01A-11R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
negative regulation of interleukin-1 production	GO Biological Process Annotations 2025	1.0	null
Behcet's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.151
Lung squamous cell carcinoma_LUSC_TCGA-85-8070-01A-11R-2247-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cingulate gyrus, retrosplenial part, right, superior bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.68537
SJCRH30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.5349
DLX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.2524
A549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14442
CJUN-26792858-CHIP-SEQ-BT549-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
NCI-H810	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.37138
HOXB7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.6295
MAFG::NFE2L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.5959
HMBOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.4926
Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-5326-01A-01R-1873-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MEOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.8859
ESRRA_01_115	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.68826
intracellular membraneless organelle	GO Cellular Component Annotations 2025	1.0	null
HOXA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.7106
intracellular non-membrane-bounded organelle	GO Cellular Component Annotations 2023	1.0	null
POU3F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.7217
Prostate Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
OCIM1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.54497
NCIH2170	CCLE Cell Line Gene CNV Profiles	-1.0	-1.3544
PMC6167382-41467_2018_6258_MOESM4_ESM.xlsx-TEAD-associated_GSC-Specific_UP-Nearest_Ensembl_GSC	Rummagene Transcription Factor Associations 2026	1.0	null
PANC0203	CCLE Cell Line Gene CNV Profiles	1.0	1.49273
POLR2A_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-FU-A23L-01A-11R-A16R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HCC2885	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.60101
occipito-temporal gyrus, left, inferior bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.99491
KNS62	CCLE Cell Line Gene CNV Profiles	1.0	1.44448
RARB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.3746
NCI-H650	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.23105
medial geniculate complex, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.907764
LS1034	CCLE Cell Line Gene CNV Profiles	-1.0	-1.4784
TT	CCLE Cell Line Gene CNV Profiles	1.0	1.38295
T84	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.999613
AR-20517297-VCAP-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
GATA3-21878914-MCF-7-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
NCI-H460	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.86738
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-A6V3-01A-12R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
LBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.5246
COR-L47	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13878
NLRP2	Pathway Commons Protein-Protein Interactions	1.0	null
GATA3-26560356-CHIP-SEQ-TH2-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
SHOX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.9613
SNU626	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35183
TAL1	ENCODE Transcription Factor Targets	1.0	null
BECKER	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36657
Bladder Urothelial Carcinoma_BLCA_TCGA-BT-A20X-01A-11R-A16R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF680	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.3203
KMM1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32692
ARGFX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.603
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.850031
NUP58	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07763
MAF::NFE2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.0697
PANC 02.03	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.01712
JDP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.7781
inferior rostral gyrus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.15393
Histiocytic lymphoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.364
planum polare, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.835745
negative regulation of interleukin-1 beta production	GO Biological Process Annotations 2025	1.0	null
Vascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.053
X	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.12668
negative regulation of cytokine-mediated signaling pathway	GO Biological Process Annotations 2023	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-E1-A7YN-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Blau syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.18
NUDUL1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.02743
Type III protein secretion system complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.157
Head and Neck squamous cell carcinoma_HNSC_TCGA-HD-7753-01A-11R-2081-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CEBPB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.3905
NFIL3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9677
TE441T	CCLE Cell Line Gene CNV Profiles	-1.0	-2.58961
P53-22127205-FIBROBLAST-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
negative regulation of interleukin-1 beta production	GO Biological Process Annotations 2023	1.0	null
prostate	HPA Tissue Protein Expression Profiles	-1.0	-1.70377
MIXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.6772
regulation of inflammatory response	GO Biological Process Annotations 2025	1.0	null
RUNX2-22187159-PCA-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
KMM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.40286
Lung squamous cell carcinoma_LUSC_TCGA-NC-A5HQ-01A-11R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
regulation of tumor necrosis factor-mediated signaling pathway	GO Biological Process Annotations 2025	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-NC-A5HO-01A-11R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
496100481_PCx_no dementia_no TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.15791
NANOG-19829295-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
LC1SQSF	CCLE Cell Line Gene CNV Profiles	1.0	2.74292
superior rostral gyrus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.17856
Lung squamous cell carcinoma_LUSC_TCGA-58-A46L-01A-11R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-63-A5MR-01A-31R-A27Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
parolfactory gyri, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.68364
NLRP12	Pathway Commons Protein-Protein Interactions	1.0	null
regulation of interleukin-1 beta production	GO Biological Process Annotations 2023	1.0	null
SMAD2/3-21741376-EPCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
NCI-H1435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.6835
COR-L279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.931103
SMAD4-21741376-HESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
496100641_PCx_no dementia_no TBI_84_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.25146
Sarcoma_SARC_TCGA-DX-A6YU-01A-12R-A33J-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PHOX2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.8069
SOX18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.5153
cytoplasm	GO Cellular Component Annotations 2015	1.0	null
nuclear lumen	GO Cellular Component Annotations 2023	1.0	null
BHLHE23	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.4104
FOXC1	JASPAR Predicted Transcription Factor Targets	1.0	null
intracellular membrane-bounded organelle	GO Cellular Component Annotations 2025	1.0	null
Autoimmune disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.099
Bladder Urothelial Carcinoma_BLCA_TCGA-E5-A2PC-01A-11R-A206-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
fusiform gyrus, right, lateral bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.71259
BACH1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.6739
PROX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.5083
ARGFX	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.73089
gigantocellular group, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.03793
EVSA-T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.18993
OLIG1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.3208
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GS-A9TV-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NOD-like receptor signaling pathway	KEGG Pathways 2026	1.0	null
occipito-temporal gyrus, right, superior bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.07236
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4696-01A-01R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DDRGK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.471
BATF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.6537
temporal pole, left, superior aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.897023
MEF2C	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	83.6089
pancreas	HPA Tissue Protein Expression Profiles	-1.0	-0.982913
Disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.229
ONECUT3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	70.522
cerebral cortex	HPA Tissue Protein Expression Profiles	-1.0	-1.70377
PPARD-21283829-MYOFIBROBLAST-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
NCI-H2170	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09826
MFE-280	COSMIC Cell Line Gene CNV Profiles	1.0	2.09529
EZH2	ENCODE Transcription Factor Targets	1.0	null
EP300	ENCODE Transcription Factor Targets	1.0	null
VSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.5787
CTBP1-25329375-LNCAP-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
VIIIB, left, paravermis	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.29246
CDX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.7698
POU5F1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.7348
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
negative regulation of inflammatory response	GO Biological Process Annotations 2023	1.0	null
TAL1::TCF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.7045
Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7JA-01A-12R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
vagina	HPA Tissue Protein Expression Profiles	1.0	0.806563
SOX13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.7489
PMC7397849-supp_gad.338681.120_Supplemental_Table_S3.xlsx-S3L_Peaks_2SA-YAP1_TEAD4-Unnamed_11_TEAD4	Rummagene Transcription Factor Associations 2026	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2MH-06A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CINCA Syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.468
PRRX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.4147
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55917
negative regulation of cytokine-mediated signaling pathway	GO Biological Process Annotations 2025	1.0	null
EFO21	CCLE Cell Line Gene CNV Profiles	1.0	2.35895
Muckle-Wells syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.086
thyroid gland	HPA Tissue Protein Expression Profiles	1.0	0.806563
HS 578T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16543
Kidney renal clear cell carcinoma_KIRC_TCGA-CW-5589-11A-01R-1541-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RARG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.5871
MDAMB436	CCLE Cell Line Gene CNV Profiles	-1.0	-1.41593
JHH6	CCLE Cell Line Gene CNV Profiles	-1.0	-1.42276
NCI-H520	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08214
KYSE-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.939676
CDX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.1358
496100631_PCx_dementia_TBI_77_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.58373
mammillary body, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.0946
VAX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.0961
protein binding	GO Molecular Function Annotations 2015	1.0	null
interleukin-18 receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.897
HOXC13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.3079
SCRT2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.0912
lateral group of nuclei, right, dorsal division	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.11555
GBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.9767
PROP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.0499
EMX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.8486
OCI-AML2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.899611
Mucin granule	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.541
RARA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	49.8739
Lung squamous cell carcinoma_LUSC_TCGA-18-3419-01A-01R-0980-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DAN-G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.25945
HCC60	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.38822
temporal pole, right, superior aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.33228
PE/CA-PJ15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.931103
FOXD2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.75
gyrus rectus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.987654
mammillary body, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.946324
SNU119	CCLE Cell Line Gene CNV Profiles	1.0	2.13501
FOSL1::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.0469
Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A70K-01A-12R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Arrhythmogenic right ventricular dysplasia 6	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.662
PMC10123531-NIHMS1874945-supplement-Table_S6.xlsx-SOX2_BCAT_cobound_peaks-Gene_Name_SOX2	Rummagene Transcription Factor Associations 2026	1.0	null
EWS-ERG-20517297-CADO-ES1-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-18-4083-01A-01R-1100-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
EMX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.1545
ONECUT1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.2265
ZNF214	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.7085
Liver hepatocellular carcinoma_LIHC_TCGA-G3-A7M9-01A-23R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC11982601-IMM-175-84-s005.xlsx-Fig5D_LPS-Innate_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
intracellular part	GO Cellular Component Annotations 2015	1.0	null
T47D	CCLE Cell Line Gene CNV Profiles	1.0	1.58121
nucleus	GO Cellular Component Annotations 2023	1.0	null
septal nuclei, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.875505
H3K4me2_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
CAPAN-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.917607
496100379_TCx_probable Alzheimer's disease_no TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.14258
intracellular membrane-bounded organelle	GO Cellular Component Annotations 2015	1.0	null
paracentral lobule, posterior part, right, lateral bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	2.24586
NLRP4	Pathway Commons Protein-Protein Interactions	1.0	null
Sarcoma_SARC_TCGA-DX-AB2Z-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TAL1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
G122	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.50677
temporal pole, right, inferior aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.887418
uterus	GTEx Tissue Gene Expression Profiles	-1.0	-0.897864
negative regulation of inflammasome-mediated signaling pathway	GO Biological Process Annotations 2025	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-YL-A8S8-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-EJ-A65J-01A-11R-A311-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ALX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.7576
MYF6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.728
HGC-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.36005
SMAD4	ChEA Transcription Factor Targets	1.0	null
RCOR1	ENCODE Transcription Factor Targets	1.0	null
Activin AB complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.972
SNU475	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34792
AR	ChEA Transcription Factor Targets	1.0	null
SNU-484	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.73314
gracile nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.855654
Death-like domain	InterPro Predicted Protein Domain Annotations	1.0	null
intracellular organelle	GO Cellular Component Annotations 2015	1.0	null
inferior temporal gyrus, left, bank of mts	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.882932
TE14	CCLE Cell Line Gene CNV Profiles	1.0	1.37349
HCC2270	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05027
KYSE-510	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32084
SRY	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.7857
LHX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.4641
PPARD-21283829-MYOFIBROBLAST-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
HARA	CCLE Cell Line Gene CNV Profiles	1.0	1.3328
heart muscle	HPA Tissue Protein Expression Profiles	1.0	0.806563
GATA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.2553
EWSR1	ChEA Transcription Factor Targets	1.0	null
Cardiovascular system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.091
EZH2_keratinocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
pg4	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.602
DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.8054
NCI-H146	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.57686
SQ1	CCLE Cell Line Gene CNV Profiles	1.0	1.47001
SUPT11	CCLE Cell Line Gene CNV Profiles	-1.0	-1.79156
Lung squamous cell carcinoma_LUSC_TCGA-43-A474-01A-11R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
fusiform gyrus, right, bank of the its	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.847482
negative regulation of defense response	GO Biological Process Annotations 2023	1.0	null
COV504	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09825
POU2F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.1463
NCIH1648	CCLE Cell Line Gene CNV Profiles	1.0	1.54797
negative regulation of DNA-binding transcription factor activity	GO Biological Process Annotations 2025	1.0	null
EWS-ERG-20517297-CADO-ES1-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
SNU-475	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.31733
TP53	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.8856
CREB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.5585
496100446_TCx_no dementia_no TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.3027
NCIH2196	CCLE Cell Line Gene CNV Profiles	1.0	1.72362
fusiform gyrus, right, bank of cos	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.78394
Brain Lower Grade Glioma_LGG_TCGA-E1-A7YD-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
nuclear lumen	GO Cellular Component Annotations 2025	1.0	null
SHP77	CCLE Cell Line Gene CNV Profiles	-1.0	-1.75373
NLRP1	Pathway Commons Protein-Protein Interactions	1.0	null
CDX2-22108803-LS180-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
JHOS4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.47371
HCC2688	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.858164
FOXC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.0641
Primary immunodeficiency disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.081
NLRP1 inflammasome complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.406
Head and Neck squamous cell carcinoma_HNSC_TCGA-KU-A66S-01A-21R-A30B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF652	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.6481
NCI-H2122	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.866559
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
Sarcoma_SARC_TCGA-DX-A2J0-01A-11R-A21T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
negative regulation of response to external stimulus	GO Biological Process Annotations 2023	1.0	null
negative regulation of protein-containing complex assembly	GO Biological Process Annotations 2023	1.0	null
PMC4021073-1471-2407-14-278-S4.xlsx-Sheet1-Supplementary_Table_S5_Genes_with_GATA3_ChIP-seq_peak_within_10kb_from_transcription_start_site_TSS_GATA3	Rummagene Transcription Factor Associations 2026	1.0	null
NCI-H2198	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.96732
HCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.53115
GSE230263,GSE230265_3_v_1_runx1_human	RummaGEO Gene Perturbation Signatures	1.0	null
WDR5-24793694-LNCAP-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
GSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.8282
Skin Cutaneous Melanoma_SKCM_TCGA-EB-A6QY-01A-12R-A32P-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KDM5A	ENCODE Transcription Factor Targets	1.0	null
NUDT22	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.46131
OCI-M1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.48385
KYSE-70	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.858164
PMC8423434-mmc7.xlsx-SOX2_Primed-Genes_n_3042_SOX2	Rummagene Transcription Factor Associations 2026	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-G2-A2EJ-01A-11R-A180-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
binding	GO Molecular Function Annotations 2015	1.0	null
MEF2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	60.8456
Aggressive Periodontitis	DisGeNET Gene-Disease Associations	1.0	null
DUXA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.9033
LS1034	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.40286
lung	HPA Tissue Protein Expression Profiles	1.0	0.806563
HOXB4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.2458
angular gyrus, left, inferior bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.893406
SAP30	ENCODE Transcription Factor Targets	1.0	null
HS 766T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.86738
HCC1937	CCLE Cell Line Gene CNV Profiles	1.0	1.75087
AIM2 inflammasome complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.564
DUX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.7357
496100567_PCx_no dementia_TBI_87_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.36198
Prostate adenocarcinoma_PRAD_TCGA-HC-7080-01A-11R-1965-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
fusiform gyrus, left, bank of the its	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.844518
NFATC4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.7551
PMC7397849-supp_gad.338681.120_Supplemental_Table_S3.xlsx-S3L_Peaks_2SA-YAP1_TEAD4-Unnamed_14_TEAD4	Rummagene Transcription Factor Associations 2026	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-WB-A81T-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H2196	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.72233
regulation of inflammatory response	GO Biological Process Annotations 2023	1.0	null
KASUMI2	CCLE Cell Line Gene CNV Profiles	-1.0	-2.04689
SUM 1315M02	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.89082
NCI-H1304	COSMIC Cell Line Gene CNV Profiles	1.0	2.09529
HOXA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.6329
adrenal gland	GTEx Tissue Gene Expression Profiles	-1.0	-0.897864
NU-DUL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.96294
AR-20517297-VCAP-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
NCI-H1882	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.86738
SOX8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.3659
FU97	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.931103
NCI-H1648	COSMIC Cell Line Gene CNV Profiles	1.0	2.09529
J-774A.1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.464
SCC4	CCLE Cell Line Gene CNV Profiles	1.0	1.35121
PAX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.4744
I-II	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.17359
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.60101
Head and Neck squamous cell carcinoma_HNSC_TCGA-P3-A5QF-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
anterior orbital gyrus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	2.82969
ABC1	CCLE Cell Line Gene CNV Profiles	1.0	1.51638
nfkappab	GeneRIF Biological Term Annotations	1.0	null
YY1	JASPAR Predicted Transcription Factor Targets	1.0	null
MDA-MB-468	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14442
RBPJ	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.6815
OLIG3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.3279
Metatropic dysplasia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.092
EVX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.0916
NCI-H2052	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14442
GSE226770_3_v_6_atrx_human	RummaGEO Gene Perturbation Signatures	1.0	null
ABC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.845745
Sarcoma_SARC_TCGA-WK-A8XT-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
superior frontal gyrus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.839487
P300-19829295-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
ZNF184	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.8232
496100513_TCx_no dementia_TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.57486
COLO 680N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856883
PMC11058205-42003_2024_6202_MOESM5_ESM.xlsx-Data2c_CEBPA_ChIP-Unnamed_9_CEBPA	Rummagene Transcription Factor Associations 2026	1.0	null
NCI-H345	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.939676
SNU1214	CCLE Cell Line Gene CNV Profiles	1.0	1.70725
negative regulation of response to external stimulus	GO Biological Process Annotations 2025	1.0	null
MEF2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	54.3503
negative regulation of tumor necrosis factor-mediated signaling pathway	GO Biological Process Annotations 2025	1.0	null
OVKATE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05595
KYSE-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09825
regulation of NLRP3 inflammasome complex assembly	GO Biological Process Annotations 2025	1.0	null
CAKI-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.66992
ATF6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.9582
molecular_function	GO Molecular Function Annotations 2015	1.0	null
496100623_PCx_no dementia_TBI_86_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.01001
PMC8423434-mmc7.xlsx-KLF4_HENSM-Genes_n_2172_KLF4	Rummagene Transcription Factor Associations 2026	1.0	null
negative regulation of intracellular signal transduction	GO Biological Process Annotations 2023	1.0	null
FOXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.8897
Bladder Urothelial Carcinoma_BLCA_TCGA-E5-A4TZ-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BFTC-905	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.10215
Familial Mediterranean fever	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.459
OAW28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.33532
TE5	CCLE Cell Line Gene CNV Profiles	1.0	1.50642
HCC1576	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.866559
HESX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.247
BACH2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	51.9556
PMC6347838-13046_2019_1042_MOESM3_ESM.xls-PRDM16_group_peak_anno-Gene_PRDM16	Rummagene Transcription Factor Associations 2026	1.0	null
KG-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.763
496100414_TCx_probable Alzheimer's disease_no TBI_87_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.34144
Cervical Intraepithelial Neoplasia	DisGeNET Gene-Disease Associations	1.0	null
DLX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.7307
inferior temporal gyrus, right, bank of the its	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.95977
Brain Lower Grade Glioma_LGG_TCGA-DU-A6S3-01A-12R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE230263,GSE230265_6_v_1_runx1_human	RummaGEO Gene Perturbation Signatures	1.0	null
LCLC-103H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22444
POU5F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.9669
LC1F	CCLE Cell Line Gene CNV Profiles	1.0	1.35271
Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A3B5-01A-11R-A20F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF558	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	168.18
POU3F4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7718
nucleus	GO Cellular Component Annotations 2025	1.0	null
SOX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.722
Nucleolus	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	4.0
KYO1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.74684
Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-7051-11A-02R-1965-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC7378211-41598_2020_69015_MOESM3_ESM.xlsx-EWS-WT1_rep1_testp-7_annotatedp-Gene_Name_WT1	Rummagene Transcription Factor Associations 2026	1.0	null
SJRH30	CCLE Cell Line Gene CNV Profiles	-1.0	-1.62763
POU4F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.5752
smooth muscle	HPA Tissue Protein Expression Profiles	1.0	0.806563
Lung squamous cell carcinoma_LUSC_TCGA-98-8022-01A-11R-2247-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-BB-A5HZ-01A-21R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF157	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	75.2593
nucleolus	GO Cellular Component Annotations 2023	1.0	null
NCI-H727	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01521
negative regulation of NIK/NF-kappaB signaling	GO Biological Process Annotations 2023	1.0	null
kidney	GTEx Tissue Gene Expression Profiles	-1.0	-0.897864
Apoptosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.863
MDN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.44617
DMS 53	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05104
NLRP3 inflammasome complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.539
EP300_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
nucleolus	GO Cellular Component Annotations 2025	1.0	null
LN-18	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.866559
negative regulation of NF-kappaB transcription factor activity	GO Biological Process Annotations 2025	1.0	null
HCC1897	CCLE Cell Line Gene CNV Profiles	1.0	1.72332
EMC-BAC-1	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.17182
regulation of NLRP3 inflammasome complex assembly	GO Biological Process Annotations 2023	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7409-01A-31R-2232-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NR4A1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.3515
NCIH23	CCLE Cell Line Gene CNV Profiles	-1.0	-2.10826
Disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.154
Bladder Urothelial Carcinoma_BLCA_TCGA-ZF-A9RL-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NF-kappaB p50/p65 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.135
COLO 320DM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.52695
Head and Neck squamous cell carcinoma_HNSC_TCGA-BA-4078-01A-01R-1436-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PANC 03.27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.34985
Acute Periodontitis	DisGeNET Gene-Disease Associations	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A3B4-01A-12R-A206-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
negative regulation of NF-kappaB transcription factor activity	GO Biological Process Annotations 2023	1.0	null
BICR 31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.24416
spleen	HPA Tissue Protein Expression Profiles	1.0	0.806563
Lung squamous cell carcinoma_LUSC_TCGA-94-7033-01A-11R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
superior temporal gyrus, right, lateral bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.857075
ATOH7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.3851
POU4F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.8635
HGC27	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35156
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4845-01A-01R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Gout	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.141
A388	COSMIC Cell Line Gene CNV Profiles	1.0	2.09529
TAF2-19829295-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
OLIG2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.1878
G61	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.866559
RERF-LC-KJ	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14515
HCC95	CCLE Cell Line Gene CNV Profiles	1.0	2.07478
Inflammasome complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.005
CEBPG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.0742
small intestine	GTEx Tissue Gene Expression Profiles	-1.0	-0.897864
Lung squamous cell carcinoma_LUSC_TCGA-56-7823-01B-11R-2247-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
U266B1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.893986
SOX12	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.3762
KYSE-180	COSMIC Cell Line Gene CNV Profiles	1.0	2.09529
MM.1S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05595
PBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.397
NCIH1435	CCLE Cell Line Gene CNV Profiles	-1.0	-1.53945
DAPIN domain	InterPro Predicted Protein Domain Annotations	1.0	null
regulation of tumor necrosis factor-mediated signaling pathway	GO Biological Process Annotations 2023	1.0	null
SF268	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.866559
Lung squamous cell carcinoma_LUSC_TCGA-90-A4ED-01A-31R-A24Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Glial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.795
EVSAT	CCLE Cell Line Gene CNV Profiles	-1.0	-1.37605
POLR2A	ENCODE Transcription Factor Targets	1.0	null
BATF::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.7595
frontal pole, left, medial aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.31887
Chronic Periodontitis	DisGeNET Gene-Disease Associations	1.0	null
MSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.9467
Lung squamous cell carcinoma_LUSC_TCGA-34-5929-01A-11R-1820-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
COV413A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.57753
FOSL1::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.4524
NR4A2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.3523
HSF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.6371
Skin Cutaneous Melanoma_SKCM_TCGA-FS-A1YY-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BICR 22	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05595
GSE222047_0_v_1_imidazole_human	RummaGEO Drug Perturbation Signatures	-1.0	null
RAX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.6319
nlr	GeneRIF Biological Term Annotations	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-E7-A97Q-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HOXC10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.6988
Lung squamous cell carcinoma_LUSC_TCGA-NC-A5HG-01A-11R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.7756
Lung squamous cell carcinoma_LUSC_TCGA-85-8288-01A-11R-2296-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
asc	GeneRIF Biological Term Annotations	1.0	null
PANC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856883
FOXM1-26456572-MCF-7-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
CAOV3	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
Lung squamous cell carcinoma_LUSC_TCGA-63-5131-01A-01R-1443-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
POU4F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.5749
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-5441-01A-01R-1514-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
frontal pole, left, superior aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.954985
PMC7378211-41598_2020_69015_MOESM3_ESM.xlsx-EWS-WT1_rep1_testp-7_annotatedp-ID_WT1	Rummagene Transcription Factor Associations 2026	1.0	null
RI1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.00917
cell part	GO Cellular Component Annotations 2015	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A3C6-06A-12R-A18U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
JUN::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.2319
GATA5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.541
MAFK	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.2546
UNCX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.6702
SCLC-22H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19221
G130	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09826
Uterine Carcinosarcoma_UCS_TCGA-NA-A5I1-01A-21R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
central gray of the pons, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.67696
frontal pole, right, inferior aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.27185
HCC4017	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14442
Lung squamous cell carcinoma_LUSC_TCGA-NC-A5HR-01A-21R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
OAW28	CCLE Cell Line Gene CNV Profiles	1.0	1.38357
496100563_PCx_no dementia_TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.24516
NCIH650	CCLE Cell Line Gene CNV Profiles	-1.0	-2.30789
negative regulation of inflammatory response	GO Biological Process Annotations 2025	1.0	null
Endometriosis of ovary	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.112
HCC1937	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.17245
DMRTC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1724
LC-1-SQ	COSMIC Cell Line Gene CNV Profiles	1.0	2.09529
Lung squamous cell carcinoma_LUSC_TCGA-NC-A5HT-01A-11R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CAOV-3	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.17182
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4774-01A-01R-1289-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-IQ-7630-01A-11R-2081-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NRF2-31884422-A549-HUMAN-LUNG-CARCINOMA	ChEA Transcription Factor Targets 2022	1.0	null
KU812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.866559
Pancreatic adenocarcinoma_PAAD_TCGA-F2-A7TX-01A-33R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Astrocyte cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.007
BATF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.9726
Liver hepatocellular carcinoma_LIHC_TCGA-G3-A7M6-01A-11R-A33R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
skeletal muscle	HPA Tissue Protein Expression Profiles	1.0	0.806563
esophagus	HPA Tissue Protein Expression Profiles	1.0	0.806563
PMC7880998-41467_2021_21255_MOESM8_ESM.xlsx-Sup_Data_5_TWIST_Panel-Gene_Name_TWIST1	Rummagene Transcription Factor Associations 2026	1.0	null
cingulum bundle, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.890023
Lung squamous cell carcinoma_LUSC_TCGA-NK-A5CR-01A-11R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
middle temporal gyrus, right, inferior bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.863194
colon	HPA Tissue Protein Expression Profiles	1.0	0.806563
MOR	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.86738
TLX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.5655
MEOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.5211
Lung squamous cell carcinoma_LUSC_TCGA-98-8021-01A-11R-2247-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
VIIAf	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.07261
NCI-H1770	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.86738
RUNX2	ChEA Transcription Factor Targets	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-56-A5DR-01A-11R-A27Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Paw	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.65
HT-144	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.939676
FOXB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.158
ZNF677	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.8083
frontal pole, right, superior aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.71581
EFM-19	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.858164
ZNF85	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.4812
pontine raphe nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.08889
regulation of interleukin-1 beta production	GO Biological Process Annotations 2025	1.0	null
HCC2814	CCLE Cell Line Gene CNV Profiles	1.0	2.75069
Head and Neck squamous cell carcinoma_HNSC_TCGA-D6-A6EK-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-2F-A9KP-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC8202205-NIHMS1706275-supplement-Table_S1.xlsx-Def_End_D4_GATA6-dependent-ENSEMBL_GATA6	Rummagene Transcription Factor Associations 2026	1.0	null
HOXD9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.0173
negative regulation of intracellular signal transduction	GO Biological Process Annotations 2025	1.0	null
SIX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.0984
DOV13	CCLE Cell Line Gene CNV Profiles	-1.0	-1.58991
CAKI2	CCLE Cell Line Gene CNV Profiles	1.0	1.87965
NFYB_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-CC-A7IJ-01A-11R-A33R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
negative regulation of tumor necrosis factor-mediated signaling pathway	GO Biological Process Annotations 2023	1.0	null
HCC15	CCLE Cell Line Gene CNV Profiles	-1.0	-1.43912
POU3F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.5426
Head and Neck squamous cell carcinoma_HNSC_TCGA-BB-A5HU-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DETROIT 562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.57686
Brain stem infarction	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.043
NCI-H1395	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01521
KNS-62	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32317
paracentral lobule, posterior part, right, bank of cingulate sulcus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.60701
negative regulation of NLRP3 inflammasome complex assembly	GO Biological Process Annotations 2025	1.0	null
H2AFZ_CD14-positive monocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NEUROG1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.1909
ZFP42	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.6587
PMC8202205-NIHMS1706275-supplement-Table_S1.xlsx-Def_End_D4_GATA6-dependent-SYMBOL_GATA6	Rummagene Transcription Factor Associations 2026	1.0	null
T-47D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.77436
SCRT1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.5475
negative regulation of DNA-binding transcription factor activity	GO Biological Process Annotations 2023	1.0	null
g7	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.801
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-5359-01A-01R-1436-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HOXD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.1088
GATA3	ENCODE Transcription Factor Targets	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-DK-A1AA-01A-11R-A13Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ISX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.2721
POU2F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	55.4529
KYSE30	CCLE Cell Line Gene CNV Profiles	1.0	1.3328
nucleus	GO Cellular Component Annotations 2015	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-77-A5G8-01B-11R-A27Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RAX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.2456
Bladder Urothelial Carcinoma_BLCA_TCGA-S5-AA26-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
POU6F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.597
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A2J6-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
POU3F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.1825
LMX1A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.1695
TCF7L2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.2194
U-2932	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.973964
GATA3_SH-SY5Y_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
A-431	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.850031
intracellular membrane-bounded organelle	GO Cellular Component Annotations 2023	1.0	null
lymph node	HPA Tissue Protein Expression Profiles	-1.0	-1.70377
pontine reticular formation, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.964037
Serum metabolite concentrations in chronic kidney disease	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.752288
SMAD3-21741376-EPCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
AR-21915096-LNCAP-1F5-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
DMS 79	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.01712
Malignant Neoplasm	DisGeNET Gene-Disease Associations	1.0	null
organelle	GO Cellular Component Annotations 2015	1.0	null
POU1F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	77.3977
SMAD4-21741376-HESC-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
Mesothelioma_MESO_TCGA-LK-A4NY-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7J9-01A-12R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
temporal pole, right, medial aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.59078
Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A3SN-01A-12R-A22U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
negative regulation of interleukin-1 production	GO Biological Process Annotations 2023	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-85-8352-01A-31R-2326-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC7616986-EMS181817-supplement-Supplemenatry_tables.pdf-684-PTF1A_PTF1A	Rummagene Transcription Factor Associations 2026	1.0	null
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.44316
ISTMES2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.68199
FOXF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.3704
domains	GeneRIF Biological Term Annotations	1.0	null
CAL-85-1	COSMIC Cell Line Gene CNV Profiles	1.0	2.09529
regulation of NIK/NF-kappaB signaling	GO Biological Process Annotations 2023	1.0	null
negative regulation of protein-containing complex assembly	GO Biological Process Annotations 2025	1.0	null
U-937	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.917617
SOX10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.6268
PYCARD	Pathway Commons Protein-Protein Interactions	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-GC-A3RD-01A-12R-A22U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PLC/PRF/5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.06308
regulation of non-canonical NF-kappaB signal transduction	GO Biological Process Annotations 2025	1.0	null
TCF7L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.6772
Cowpox	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.002