association	dataset	threshold value	standardized value
UM-UC-5 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.889
GSE247084,GSE247087_0_v_1_cdyl_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.162
Medial cortex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.503
GSE110268_0_v_3_foxd1_human	RummaGEO Gene Perturbation Signatures	1.0	null
WIL2-S cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.932
Viral infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.227
Ventral surface of cell	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.534
Lhx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	189.85
GSE171572_5_v_2_tp53_human	RummaGEO Gene Perturbation Signatures	1.0	null
GSE207514,GSE207515_0_v_3_acetylcysteine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
digestive tract development	GO Biological Process Annotations 2025	1.0	null
Gfi1b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	40.2544
Uterine cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.045
Wax gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.402
Lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.5
Glucose metabolism disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.211
Cell envelope Sec protein transport complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.587
Spinothalamic tract	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.601
Disease by infectious agent	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.406
OVCA-432 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.927
ZNF320	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	182.697
Gonadal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.509
Myeloid neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.156
GSE179031_0_v_2_foxp1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
ERCC4-ERCC1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.774
GSE203060_0_v_2_kdm4c_human	RummaGEO Gene Perturbation Signatures	1.0	null
Mitotic spindle midzone	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.754
PLAGL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	81.9203
GSE169152_3_v_2_ibrutinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
Mitochondrial inner membrane peptidase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.025
Hoxd13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	79.1419
GSE188721_3_v_1_mesp1_human	RummaGEO Gene Perturbation Signatures	1.0	null
MDA-MB-361 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.624
Ameloblastic layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.694
GSE205163,GSE205164_1_v_8_znf808_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE158715_2_v_4_cyp1b1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Thap11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.05
B-cell lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.138
GSE48812_9_v_10_sulforaphane_human	RummaGEO Drug Perturbation Signatures	-1.0	null
SK-RC-45 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.02
PMC12670081-mct-24-0704_supplementary_table_s10_suppst10.xlsx-Supplementary_Table_S10-Supplementary_Table_S10_Differential_expression_of_TFCP2-rearranged_RMS_Vs_Other_RMS_FC_3_padj_0_01_TFCP2	Rummagene Transcription Factor Associations 2026	1.0	null
Pancreatic adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.008
Inherited metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.258
laminin-5B complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.986
Mesothelioma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.778
Pancreas disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.383
OVCAR-3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.93
Lung disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.598
NCI-H929 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.039
Mitochondrial isocitrate dehydrogenase complex (NAD+)	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.508
GSE193258,GSE193259_9_v_14_osimertinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
SNAI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.1576
Monogenic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.095
Babesiosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.09
PSMG3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.2836
FIGLA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.2152
TFAP2C	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	174.465
S-180 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.174
GSE77108_4_v_2_saha_human	RummaGEO Drug Perturbation Signatures	1.0	null
Cellulose microfibril	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.048
Immune system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.524
Branch	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.578
Pancreatic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.412
Acute leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.118
Germ cell cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.735
Mesothelioma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.684
GSE215086_0_v_1_batf_human	RummaGEO Gene Perturbation Signatures	1.0	null
TFAP2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	167.152
SCC-13 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.78
GSE77108_6_v_2_saha_human	RummaGEO Drug Perturbation Signatures	1.0	null
Zic2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	27.3185
Stat5b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	31.7529
DAUDI cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.129
MYC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9365
Vdr	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	22.1995
ZNF549	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.3648
GSE224157_3_v_0_doxorubicin_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
Fibula	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.553
enteroendocrine cell differentiation	GO Biological Process Annotations 2025	1.0	null
PC-14 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.723
Sweat gland benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.041
Cervical adenocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.763
Bone marrow disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.177
GSE158715_3_v_0_cyp1b1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE166944_0_v_2_eif4b_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE149075_6_v_9_foxa2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
SKOV-3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.342
AsPC-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.102
Prdm5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.3892
A-431 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.843
GSE221327_10_v_0_clpp_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE199606_1_v_4_ricin_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
High grade glioma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.067
Protonema	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.633
MYF5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.5037
Pancreatic adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.223
EBF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.9113
Carbohydrate metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.205
Large intestine cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.562
Prostate epithelium cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.626
oe19	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.692
Female pronucleus	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.796
MV4-11 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.983
Colo-205 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.638
SNAI3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.0864
Cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.158
Fibrosarcoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.079
Primary immunodeficiency disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.726
GSE48812_11_v_5_sulforaphane_human	RummaGEO Drug Perturbation Signatures	1.0	null
Malignant exocrine pancreas neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.025
dh82	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.203
Nfe2l2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	21.8361
Respiratory system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.653
Diarrhea	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.298
GSE174701_1_v_6_maml3_human	RummaGEO Gene Perturbation Signatures	1.0	null
Gli1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.7887
B16-F1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.599
GSE123958,GSE123959_0_v_1_mta1_human	RummaGEO Gene Perturbation Signatures	1.0	null
GSE174498,GSE174500_5_v_7_asparaginase_human	RummaGEO Drug Perturbation Signatures	1.0	null
G cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.819
Foxj2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	69.5875
GSE131161_3_v_4_rarres1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Arid3a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	15.5185
Cell type cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.974
OPM-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.666
ZNF816	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	59.6857
Nr2f6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	45.9238
GSE210383_0_v_1_trim71_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Pax7	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	79.272
RPMI-8226 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.121
EBF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	57.9192
Urinary system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.341
MYOG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.6741
GSE188721_3_v_4_mesp1_human	RummaGEO Gene Perturbation Signatures	1.0	null
Burkitt lymphoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.256
MAF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.3268
Left middle cerebral artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.733
NFKB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.1547
Olfactory tract	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.234
Six4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.8534
143B cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.885
BT-474 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.137
SK-RC-26B cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.216
Cardiovascular system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.314
Disease of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.032
ZNF317	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.3367
Breast disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.842
HES1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.2244
Hmx2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	97.6436
Myoepithelioma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.177
hut102	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.444
Ppara	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	16.6698
GSE226285_2_v_0_nr0b1_human	RummaGEO Gene Perturbation Signatures	1.0	null
Scapula	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.202
Hoxa13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	79.374
GSE215086_0_v_2_batf_human	RummaGEO Gene Perturbation Signatures	1.0	null
Disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.182
Teratoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.805
ZNF93	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	131.489
Vascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.248
HAND2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.8209
Enterobiasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.098
2.2.15	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.924
GSE231745_1_v_0_venetoclax_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Gastrointestinal system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.666
Intestinal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.61
RARA::RXRG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.7744
GSE48812_4_v_5_sulforaphane_human	RummaGEO Drug Perturbation Signatures	1.0	null
NCI-H1975 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.929
OSR2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.9148
GSE180525,GSE180528_1_v_0_tbx3_human	RummaGEO Gene Perturbation Signatures	1.0	null
lm2	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.656
NR1D1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.1277
Antral mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.798
Cerebrovascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.151
GSE120612_7_v_1_etoposide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
ZNF257	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.8774
Benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.003
Insular cortex	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.887
Congenital diarrhea	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.413
Lung adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.017
BCAS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.27404
GSE169152_5_v_0_ibrutinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
ZNF213	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	115.096
Endocrine system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.635
TFAP2E	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	70.8872
ASCL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	69.2297
GSE48812_2_v_10_sulforaphane_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE131161_5_v_4_rarres1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Melanoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.396
Pancreatic carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.026
CCRF-CEM cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.7
Cus cation efflux complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.559
Diabetes mellitus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.16
Dura mater	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.809
GSE175787_8_v_10_rhoc_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Copper ion transmembrane transporter complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.559
laminin-10 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.92
PMC12549544-mmc2.xlsx-AA_D1_VS_D7-Name_TEAD1	Rummagene Transcription Factor Associations 2026	1.0	null
plant-type cell wall	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.082
Urinary bladder squamous cell carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.264
Reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.819
HEL-92.1.7 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.547
Prostate cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.763
Diffuse large B-cell lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.001
VEZF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.6624
Organ system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.101
Hematologic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.643
SCC-15 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.858
GSE68925_1_v_0_fasudil_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Nervous system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.36
Combined immunodeficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.301
Gastrointestinal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.753
Middle cerebral artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.193
Thoracic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.836
Recycling endosome membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.543
ZNF324	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.2465
GSE174498,GSE174500_3_v_8_asparaginase_human	RummaGEO Drug Perturbation Signatures	1.0	null
Burkitt lymphoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.191
GSE246195,GSE246305_1_v_3_sin3a_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Central nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.473
HT-1080 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.98
Prdm15	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	35.1104
Central nervous system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.183
Root hair tip	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.605
GSE137928_0_v_1_blebbistatin_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE174498,GSE174500_3_v_7_asparaginase_human	RummaGEO Drug Perturbation Signatures	1.0	null
Male reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.774
Bach1::Mafk	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	24.1579
Antropyloric mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.794
Leaf vein	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.725
GSE169152_3_v_7_ibrutinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
Renal carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.177
BmN cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.866
FOXP3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.7523
GSE145990_1_v_0_ibrutinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
ZNF274	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.6021
MEWO cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.675
RAJI cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.068
HCC-827 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.523
TFAP2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	141.72
MYCN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.2653
ZBTB24	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	70.7778
Histone mRNA stem-loop binding complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.924
Gli2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	20.1966
C-10 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.511
BxPC-3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.859
Genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.458
GSE196117_6_v_11_clarithromycin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
NCI-H2228 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.084
Nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.588
Brain disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.311
Neural arch	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.704
Congenital megabladder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.719
GSE132948,GSE132949_4_v_1_msi2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
epithelial cell differentiation	GO Biological Process Annotations 2025	1.0	null
IKZF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.451
Adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.554
GSE145915_3_v_2_pcm1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
SK-BR-3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.987
Bone disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.054
Female reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.519
Liver cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.051
Colon cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.092
JIMT-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.596
yac1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.61
Immunodeficiency 13	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.078
cullin-RING ubiquitin ligase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.022
Mucolipidosis III gamma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.642
Pancreatic ductal adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.805
293-F FreeStyle cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.53
PMC9385264-NIHMS1828071-supplement-8.xlsx-AR-gene_symbol_AR	Rummagene Transcription Factor Associations 2026	1.0	null
NHLH2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	72.5975
GSE193258,GSE193259_9_v_3_osimertinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
Respiratory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.628
Pollen tube	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.752
Accessory olfactory bulb	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.554
GSE116492,GSE116495_3_v_2_stag2_human	RummaGEO Gene Perturbation Signatures	-1.0	null
M93-047 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.077
GSE174498,GSE174500_5_v_8_asparaginase_human	RummaGEO Drug Perturbation Signatures	1.0	null
Golgi cisterna membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.646
Lung non-small cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.386
SCaBER cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.138
GSE174701_5_v_6_maml3_human	RummaGEO Gene Perturbation Signatures	1.0	null
Urinary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.323
TRC complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.882
A-2780 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.677
Nitrogenase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.565
rt112/84	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.69
TFAP4::ETV1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	60.8851
Germ cell and embryonal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.778
GSE120612_7_v_5_etoposide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Connective tissue disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.242
Cerebral artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.185
OVCA-429 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.517
GSE149035_3_v_5_hepacam_human	RummaGEO Gene Perturbation Signatures	-1.0	null
FERD3L	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.3217
ESR2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.7047
Musculoskeletal system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.169
VCaP cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.571
digestive tract morphogenesis	GO Biological Process Annotations 2025	1.0	null
Colonic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.11
ARTN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.01491
Stomach cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.078
Lower respiratory tract disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.599
Multiple myeloma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.167
ELF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.2274
Hepatobiliary disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.177
Reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.836
Internal capsule	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.964
Rarb	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	50.6302
Cyclin D1-CDK6 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.546
RCC 786-O cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.589
MEC-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.595
Atoh1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	28.2843
PMC9385264-NIHMS1828071-supplement-8.xlsx-ESR1-gene_symbol_ESR1	Rummagene Transcription Factor Associations 2026	1.0	null
AP1G2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.55878
Breast carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.151
GSE167224,GSE168147_1_v_5_hnrnpk_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Cob	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.914
Inferior frontal gyrus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.636
Mating projection tip	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.548
GLI3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.8837
GSE248858_1_v_7_tcpobop_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
Integumentary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.076
Renal cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.182
Stomach disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.091
SF-268 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.572
Ovary adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.378
Glioblastoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.035
Isocitrate dehydrogenase complex (NAD+)	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.508
GSE48812_3_v_5_sulforaphane_human	RummaGEO Drug Perturbation Signatures	1.0	null
Type IV pilus	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.714
Carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.82
Parahippocampal gyrus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.693
NHLH1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	50.903
GSE150072,GSE169209_4_v_11_qser1_human	RummaGEO Gene Perturbation Signatures	1.0	null
p3x63ag8u.1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.636
Lef1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.8908
Malignant astrocytoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.032
Kidney disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.226
Myeloma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.318
ZNF416	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.1217
Molybdopterin cofactor (Moco) biosynthesis adenylyltransferase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.764
GSE205163,GSE205164_3_v_7_znf808_human	RummaGEO Gene Perturbation Signatures	1.0	null
Female reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.523
Colorectal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.563
GSE133213_6_v_15_znrf3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DDX27	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.76455
MYRF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.28008
GSE199034_1_v_0_pirfenidone_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE68156_3_v_5_dextran_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
Hucfm	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.923
Mafg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.8691
Paracentral lobule	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.563
SW-948 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.882
GSE180800,GSE180801_0_v_5_tex10_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Prostate disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.76
Ovarian cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.504
Ovarian disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.508
ZNF263	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	56.5725
NCI-H1915 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.219
Gastric antrum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.768
GSE226285_2_v_0_glutathione_human	RummaGEO Drug Perturbation Signatures	1.0	null
Leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.382
Silver ion transmembrane transporter complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.559
PC-3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.258
GSE74251_0_v_1_decitabine_human	RummaGEO Drug Perturbation Signatures	1.0	null
Musculoskeletal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.313
Foxj3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	92.2384
WSU-DLCL2	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.884
MDA-MB-231 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.541
GSE78199_0_v_3_tamoxifen_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE48812_4_v_6_sulforaphane_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE223893_2_v_10_setd2_human	RummaGEO Gene Perturbation Signatures	1.0	null
INSM1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	51.0833
SW-1573 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.601
Sarcoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.615
Intestinal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.56
Lymphatic system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.524
Immune system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.873
Face	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.679
ETV5::FIGLA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	81.6443
GSE174498,GSE174500_3_v_4_asparaginase_human	RummaGEO Drug Perturbation Signatures	1.0	null
MAFA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.3602
GSE174498,GSE174500_2_v_7_asparaginase_human	RummaGEO Drug Perturbation Signatures	1.0	null
Small cell lung cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.819
PADI4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.40118
Breast cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.837
HES2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.9842
Root hair	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.968
Disease of metabolism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.294
Uterine disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.038
Liver disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.131
CAPAN-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.891
GSE77108_5_v_2_saha_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE205163,GSE205164_1_v_0_znf808_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE171572_0_v_2_tp53_human	RummaGEO Gene Perturbation Signatures	1.0	null
ZNF417	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.5666
dohh2	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.513
Severe combined immunodeficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.369
ds19	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.977
Genital chamber	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.886
OVMANA cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.741
PMC12178937-mmc6.xlsx-L_AKAP12_KDvsD_AKAP12_KD_deg_al-gene_id_AR	Rummagene Transcription Factor Associations 2026	1.0	null
TRIM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17568
MKN-7 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.52
Cerebral peduncle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.651
ZSCAN21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.1911
PC-9 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.979
GSE169152_5_v_6_ibrutinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
ZNF692	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.0698
MDA-MB-435S cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.662
vh2	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.675
Jun	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	22.6937
Superior frontal gyrus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.625
pg13	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.559
Hemcss	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.618
Lymphoid leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.257
Preprophase band	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.53
ZNF143	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.6747
GSE198434_1_v_0_aspirin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE229914_2_v_3_keap1_human	RummaGEO Gene Perturbation Signatures	1.0	null
Middle frontal gyrus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.757
MBT-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.565
MSTO-211H cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.813
GSE77108_3_v_2_saha_human	RummaGEO Drug Perturbation Signatures	1.0	null
Fibroblastoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.078
colo320dm	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.617
non-Hodgkin lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.215
Autosomal genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.062
Mecom	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	32.1481
TCF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.7227
Disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.235
a24	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.7
Skin disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.075
GSE133691_2_v_0_lgr5_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE210885_2_v_4_klf4_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Hepatobiliary system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.104
Spi1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	39.1613
opm2	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.769
NPrEC cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.692
Male reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.763
Six3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	21.7414
PMC12616242-can-24-3452_supplementary_table_s2_suppst2.xlsx-Up_bins-Up_bins_gaining_H3K27me3_in_hpMSC-EWSR1_FLI1_FLI1	Rummagene Transcription Factor Associations 2026	1.0	null
Lung cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.646
GSE261177_0_v_1_tnfrsf12a_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Bone marrow cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.162
Connective tissue cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.107
Multiple myeloma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.288
toxin-antitoxin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.579
Leukocyte disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.134
Lung carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.412
GSE148010,GSE148120_3_v_2_tet2_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Squamous cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.205
PAS complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.692
GSE229580_2_v_3_creb1_human	RummaGEO Gene Perturbation Signatures	1.0	null
Hnf1a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	20.8303
Tbx6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.92
Thoracic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.841
ZNF454	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	126.856
Endocrine gland cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.501
Wsunhl	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.065
Kidney cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.269
jvm3	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.989
HT-115 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.722
GTEx Breast 20-29 vs 70-79	GTEx Tissue-Specific Aging Signatures	1.0	4.58378
GSE229580_0_v_3_creb1_human	RummaGEO Gene Perturbation Signatures	1.0	null
CTCF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	171.81
Stolon	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.617
Hematopoietic system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.607
glycine-gated chloride channel complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.543
Gastrointestinal adenocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.699
Intercalary heterochromatin	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.719
Colleterial gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.97
UM-UC-9 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.88
Lymphatic system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.524
Ovary epithelial cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.128
meta1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.041
ESR1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.8693
NFKB2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	52.3363
ZNF331	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.0286
GSE147876,GSE147877_4_v_1_enzalutamide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE224556,GSE224557_8_v_1_aire_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE160001,GSE160670_3_v_2_lapatinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Acute lymphoblastic leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.121