association	dataset	threshold value	standardized value
regulation of double-strand break repair via nonhomologous end joining	GO Biological Process Annotations 2025	1.0	null
HMGB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.943
CERS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.06609
EVPL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15378
Nfat5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.1236
CCNY	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.05549
Hoxa13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	22.4997
PPIH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.51531
GSE102467_3_v_0_pazopanib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
CCDC50	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.07876
GSE210682_2_v_1_methadone_human	RummaGEO Drug Perturbation Signatures	1.0	null
FEV	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.12801
PMC8608404__F4	PFOCR Pathway Figure Associations 2024	1.0	null
GSE197562_2_v_3_nox4_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
FB-66-UU47_0.1uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.24152
ATP6V1C1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82507
chromosome	GO Cellular Component Annotations 2025	1.0	null
Gland	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
UBA5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.3408
PUF60	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.46191
nuclear lumen	GO Cellular Component Annotations 2025	1.0	null
TULP4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.15943
MED21	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.80863
Reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.008
CMG complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.645
PTTG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.30054
OS9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.06578
PCDHB3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.1262
RBM39	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.82096
GSE158834_1_v_9_palmitic acid_human	RummaGEO Drug Perturbation Signatures	1.0	null
ITGA6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.7327
GSE135514_8_v_3_dasatinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
PMC12079334-ADVS-12-2501734-s002.pdf-56-ENSG00000062194_GPBP1	Rummagene Transcription Factor Associations 2026	1.0	null
TIMM13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15935
CRBN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40974
PIDD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.49656
PACSIN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.19429
PMC9385264-NIHMS1828071-supplement-8.xlsx-AR-gene_symbol_AR	Rummagene Transcription Factor Associations 2026	1.0	null
COL2A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.34989
GSE253041_3_v_0_ramp1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
em2	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.325
HC-74-HM63_1uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.371626
ZNF784	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.2045
GSE195513_0_v_3_cpeb1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
JD-44-KF86_1uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.292189
Gonadal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.032
GSE231641_0_v_1_robo1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE203329_2_v_1_mettl5_human	RummaGEO Gene Perturbation Signatures	-1.0	null
NUDT13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.44632
NUP37	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.18627
GSE148066,GSE157787_0_v_4_n4bp1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
CST complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.149
CORO2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.00722
PRDM1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.0844
ZNF251	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.84847
Brain - Substantia nigra	GTEx Tissue Gene Expression Profiles 2023	-1.0	-1.19565
RAMAC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.26649
BCAS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.27404
SERINC5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.79069
GSE228125_2_v_1_ptafr_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
DDX53	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.21093
Alpha DNA polymerase:primase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.038
MTF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.3321
GSE188570,GSE188571_5_v_2_decitabine_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE131649_6_v_7_hemin_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE217405_0_v_1_osimertinib_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
QE-79-XO29_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.221835
STMP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.17274
GSE225218_8_v_3_abcb1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Nkx3-1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	22.6419
Hmx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.4743
RSC-type complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.627
GSE202744_1_v_3_toyocamycin_human	RummaGEO Drug Perturbation Signatures	1.0	null
positive regulation of immunoglobulin production	GO Biological Process Annotations 2025	1.0	null
GSE186810,GSE186813_7_v_5_furin_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE158834_1_v_3_palm_human	RummaGEO Gene Perturbation Signatures	1.0	null
RALB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.07136
THUMPD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.15321
GSE147210_3_v_5_kmt2d_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
PROP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.16539
RAD17	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.2047
NFKB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.6194
GSE131649_6_v_10_hemin_human	RummaGEO Drug Perturbation Signatures	1.0	null
ZNF768	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.6815
RPP40	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.03051
GSE192771_2_v_3_sorafenib_human	RummaGEO Drug Perturbation Signatures	1.0	null
KIF17	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.239
Autosomal recessive disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.043
Cervix - Ectocervix	GTEx Tissue Gene Expression Profiles 2023	1.0	1.28454
EXOC7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.05015
telomere maintenance	GO Biological Process Annotations 2025	1.0	null
BRCA1-A complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.36
TP63	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.5221
ANOS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.33488
WDR89	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.08218
IGF2R	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.08414
ZWILCH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61297
DPYSL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47827
LSM10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.06566
MYOD1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.6612
GB-06-BA49_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.208659
Lung	GTEx Tissue Gene Expression Profiles 2023	-1.0	-0.742278
positive regulation of isotype switching	GO Biological Process Annotations 2025	1.0	null
GTEx Muscle 20-29 vs 50-59	GTEx Tissue-Specific Aging Signatures	-1.0	-6.22824
ANKIB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.91045
ERVV-2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.33647
Stat5a::Stat5b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	50.8911
NHLRC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.6375
NCAPG2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.00566
HEATR6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.32853
YME1L1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.10654
DC-70-EK34_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.342151
GDI2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50421
AB-64-ZX70_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.351824
GSE151090_0_v_3_verteporfin_human	RummaGEO Drug Perturbation Signatures	1.0	null
PMC9338531-13046_2022_2445_MOESM18_ESM.xlsx-AASE_EC109_KD-GeneID_AR	Rummagene Transcription Factor Associations 2026	1.0	null
YD-49-HM53_0.1uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.264515
SPHK2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.77761
GSE103122_0_v_1_puromycin_human	RummaGEO Drug Perturbation Signatures	1.0	null
Breast - Mammary Tissue	GTEx Tissue Gene Expression Profiles 2023	1.0	2.45796
Stat5b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	39.7692
Autosomal genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.025
ESRRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.0484
PMC8948659-ADVS-9-2104491-s013.xlsx-Sheet1-Supplemental_Table_9_related_to_Figure_7_Differential_genes_highly_correlated_with_TP53_deletion_in_H929_cells_by_RNA-seq_TP53	Rummagene Transcription Factor Associations 2026	1.0	null
GSE154577_7_v_12_plagl1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
SPRY1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.33965
PMC7724080__F2	PFOCR Pathway Figure Associations 2024	1.0	null
POU6F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.2922
GSE154577_6_v_12_plagl1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE210667_1_v_0_rfx1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
AD-16-HL96_0.1uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.378167
Disease of anatomical entity	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.99
GSE210101,GSE210114_0_v_9_urod_human	RummaGEO Gene Perturbation Signatures	-1.0	null
PMC7498599-41467_2020_18508_MOESM11_ESM.xlsx-GV_RFX-Unnamed_1_RFX1	Rummagene Transcription Factor Associations 2026	1.0	null
GSE148066,GSE157787_0_v_1_n4bp1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
FB-66-UU47_1uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.203438
Thap11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.3621
TBX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.975
CH12F3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.315
Sox1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	35.0971
ATP6AP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.20142
HC-74-HM63_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.246141
FB-66-UU47_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.505502
GSE200352_9_v_6_pparg_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
RFC4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71087
USP27X	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.62236
KDM1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.4111
GSE100528_1_v_0_mettl3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Skin - Sun Exposed (Lower leg)	GTEx Tissue Gene Expression Profiles 2023	1.0	2.71132
TSPAN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.97914
GSE186810,GSE186813_3_v_5_furin_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE190681_1_v_0_rtcb_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Bone marrow stromal stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.75
NR4A1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9753
C19orf25	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.95879
Cells - EBV-transformed lymphocytes	GTEx Tissue Gene Expression Profiles 2023	-1.0	-1.38233
CLCN6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.25551
FF-28-ES17_1uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.20853
SYP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91323
LYSET	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.01179
SULT1A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.01166
PMC9235320-mmc2.xlsx-ST9_eQTL-MR-results-Supplementary_Table_9A_The_effects_of_whole_blood_transcripts_on_COVID-19_severity_with_suggestive_Mendelian_randomization_evidence_P_0_05_using_Genomicc_data_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
KANK2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.86783
Nkx3-2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	38.8042
LA-42-ER00_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.298977
GSE139987_1_v_2_rosiglitazone_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
ANKRD49	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.84696
TYMS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.35226
STX12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.71861
GSE98898_7_v_2_hoxa1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE189859,GSE189861_1_v_2_idh1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
ZNF157	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.5728
Artery - Tibial	GTEx Tissue Gene Expression Profiles 2023	-1.0	-0.71561
Elf5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	29.3575
GSE125014_6_v_4_enzalutamide_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE131887_5_v_2_doxycycline_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
SNRPG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.3201
SIVA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.29925
ZNF135	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.23564
Foxj2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	28.7505
GSE134191_3_v_5_metformin_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
ABCB8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.68062
chromosome, telomeric region	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.789
FAM177A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.28962
KLHDC8B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.44981
Gastrointestinal system disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.99
ZNF528	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.0536
DGCR8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.56365
TMEM9B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.28679
MON2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.38256
GCDH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.19668
GA-88-CF36_1uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.477622
telomere maintenance in response to DNA damage	GO Biological Process Annotations 2025	1.0	null
CYBRD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.19789
10q22q23 copy number variation	WikiPathways Pathways 2024	1.0	null
ZNF382	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.5207
Nr1h2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	14.5523
CHERP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	6.34711
GSTCD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47265
QE-79-XO29_1uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.30296
GSE95077_5_v_3_amiloride_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE111247_14_v_10_temozolomide_human	RummaGEO Drug Perturbation Signatures	1.0	null
BTG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.34694
TET1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41731
TXNRD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47062
GSE226316_3_v_2_tead2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
PMC9235320-mmc2.xlsx-ST9_eQTL-MR-results-Unnamed_1_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
GSE80537_0_v_2_adhfe1_human	RummaGEO Gene Perturbation Signatures	1.0	null
PPP2R1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.14774
GSE191021_1_v_0_nono_human	RummaGEO Gene Perturbation Signatures	1.0	null
GSE154577_2_v_12_plagl1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Breast cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.077
g2	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.456
Intestinal disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.99
SEPTIN8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.99972
RICTOR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.07929
GSE223334_1_v_2_bcl11b_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GA-88-CF36_0.1uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.286164
SOX15	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.3518
GSE214583,GSE214585_1_v_0_steap1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
ZBED2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.4865
GSE135514_8_v_5_dasatinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
ZNF677	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.8267
RNF44	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.53604
GAPVD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.48427
positive regulation of developmental process	GO Biological Process Annotations 2025	1.0	null
GSE119978,GSE180930_3_v_8_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
MEX3B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.30203
Arid3a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	40.0741
PMC10282096-41467_2023_39038_MOESM4_ESM.xlsx-All_genes_Upregulated-ENSG00000177426_TGIF1	Rummagene Transcription Factor Associations 2026	1.0	null
mRNA cap binding complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.965
GSE186223,GSE186224_6_v_3_hmces_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
PMC11392820-41556_2024_1475_MOESM3_ESM.xlsx-Supplementary_Table_9-Supplementary_Table_9_Expression_level_of_OTX2_targeted_genes_n_999_related_to_Figure_6_OTX2	Rummagene Transcription Factor Associations 2026	1.0	null
EOMES	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.8119
GSE246184,GSE246195_0_v_1_sin3a_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE149264,GSE149267_4_v_1_trp53_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE171837_3_v_2_bortezomib_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
PMC11811132-41598_2025_89334_MOESM5_ESM.xlsx-MECP2-toNode_MECP2	Rummagene Transcription Factor Associations 2026	1.0	null
DNAJC24	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40318
Stat5a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	39.4767
RCOR2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.09916
POLE2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.62631
CB-16-SY72_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.205949
CAMSAP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.6354
VPS16	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.04699
RNA cap binding complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.864
CENPN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.27972
GSE201239_3_v_4_fmr1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
regulation of double-strand break repair via homologous recombination	GO Biological Process Annotations 2025	1.0	null
SFR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.27231
Stat4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	28.1131
Telomere cap complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.964
Exocrine gland	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Brain morphology (MOSTest)	GWAS Catalog SNP-Phenotype Associations 2025	1.0	1.5699
GSE131649_6_v_3_hemin_human	RummaGEO Drug Perturbation Signatures	1.0	null
B-lymphoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.057
DA-33-BM26_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.381787
GSE148066,GSE157787_5_v_4_n4bp1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Nr2f6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	49.7431
GSE252857_1_v_0_prednisone_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
ALDH7A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.02044
HCCS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.05556
regulation of isotype switching	GO Biological Process Annotations 2025	1.0	null
ERCC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.80505
MYL5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.57727
hTERT-RPE1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.017
GSE171269_1_v_4_pioglitazone_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
DUSP6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.05343
GSE245778_1_v_0_runx1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
PMC6407861__F1	PFOCR Pathway Figure Associations 2024	1.0	null
GSE217405_0_v_1_egfr_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Alx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	21.3118
RTN3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60959
EMP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.88799
RSPRY1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.65604
GSE104022_3_v_7_tamoxifen_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
GSE157594_5_v_7_nicotinamide_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
BRCA1-Rad51 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.172
positive regulation of B cell activation	GO Biological Process Annotations 2025	1.0	null
PMC8608404__F3	PFOCR Pathway Figure Associations 2024	1.0	null
PPP1R1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.83704
PLEKHH3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.41783
CYB5B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.05663
Dux	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	15.762
MTFR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.20603
Replication fork	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.643
MLL3/4 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.056
SLC39A8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.2633
Pax7	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	33.2625
Mre11 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.991
MICAL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.76119
GSE153871_1_v_3_cytarabine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
DNA-dependent protein kinase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.174
TUBB4B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.66926
SMG7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.80993
TARS3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.16316
ADGRL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.65428
GC-04-UF36_0.1uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.27417
Site of DNA damage	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
MLST8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.57193
GSE111247_0_v_6_temozolomide_human	RummaGEO Drug Perturbation Signatures	1.0	null
intracellular membraneless organelle	GO Cellular Component Annotations 2025	1.0	null
CB-16-SY72_0.1uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.220658
PAQR4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.31784
NF-21-HQ00_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.278466
NAV2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.76978
MEX3D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.80532
FN3KRP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.43573
IL17C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.13817
INPPL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.12297
GSE86507,GSE86509_3_v_10_hoxb7_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE151090_5_v_3_verteporfin_human	RummaGEO Drug Perturbation Signatures	1.0	null
CNKSR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.13456
Foxj3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	37.4615
SCYL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.07263
Pou5f1::Sox2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	32.302
GSE264621_1_v_6_secretin_human	RummaGEO Drug Perturbation Signatures	1.0	null
VANGL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.15859
NSMCE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91643
SMC loading complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.079
BRCA1-B complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.347
BUD23	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07449
BC-25-VR48_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.30545
positive regulation of DNA recombination	GO Biological Process Annotations 2025	1.0	null
PMC10154349-41418_2023_1142_MOESM6_ESM.xlsx-Sheet1-Supplementary_data_3_Genes_positively_correlated_with_HOXC13-AS_in_skin_granular_cells_correlation_coefficients_cor_0_FDR_0_05_HOXC13	Rummagene Transcription Factor Associations 2026	1.0	null
SLC35A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.12052
JARID2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.32952
TTK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.58584
PMC7611290__F3	PFOCR Pathway Figure Associations 2024	1.0	null
RBM17	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.02571
GSE195663_0_v_1_cisplatin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Congenital hypoplastic anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.377
SLC48A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.05764
PMC7498599-41467_2020_18508_MOESM11_ESM.xlsx-GV_RFX-Unnamed_2_RFX1	Rummagene Transcription Factor Associations 2026	1.0	null
RUNDC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.61041
Nucleoplasm	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	4.0
Site of double-strand break	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.386
BRCA1-BARD1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.711
CB-16-SY72_1uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.22855
Thoracic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.076
Lhx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	38.6
ZNF317	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.62689
NUP188	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.50808
Hmx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.5603
FUNDC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.05659
ESRRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.5057
TRIM23	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.36486
PMC11399095-44161_2024_532_MOESM14_ESM.xlsx-Sheet1-Supplementary_Table_13_DEG_in_the_AA_borderzone_in_AF_vs_SR_patients_TEAD1	Rummagene Transcription Factor Associations 2026	1.0	null
Disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.99
GET4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.22372
Anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.109
EA-18-FP00_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.667191
GSE183335,GSE183351_1_v_2_lin28b_human	RummaGEO Gene Perturbation Signatures	-1.0	null
PANK2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83858
GSE179775,GSE198264_0_v_2_ctcf_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
immunoglobulin production involved in immunoglobulin-mediated immune response	GO Biological Process Annotations 2025	1.0	null
GNPTG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.02788
Endonuclease complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.593
TNFAIP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.40982
GSE139948_3_v_6_metformin_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
Uterine sarcoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.854
BTN2A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.49691
Vagina	GTEx Tissue Gene Expression Profiles 2023	1.0	1.89792
GSE186810,GSE186813_7_v_5_furin_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
RSL1D1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.43208
GSE121824,GSE121826_0_v_6_scaf8_human	RummaGEO Gene Perturbation Signatures	1.0	null
GSE241622_1_v_0_ythdc2_human	RummaGEO Gene Perturbation Signatures	-1.0	null
NCL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.39373
RBM19	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15643
TMEM123	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.66701
IgG B cell receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.575
GA-88-CF36_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.407282
GSE57871_1_v_2_vorinostat_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Hmx2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	32.0224
Alx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.3892
SOX17	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.59261
GSE144347_1_v_0_crnkl1_human	RummaGEO Gene Perturbation Signatures	1.0	null
Ms	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.814
GSE229973_4_v_7_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE80537_3_v_2_adhfe1_human	RummaGEO Gene Perturbation Signatures	1.0	null
LRRC75A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.52331
GSE166315_5_v_0_docetaxel_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
negative regulation of double-strand break repair via homologous recombination	GO Biological Process Annotations 2025	1.0	null
GSE201239_6_v_1_fmr1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
pre-replicative complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.579
OSR2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.6784
GSE173232_1_v_3_sf3b1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
PMC6433273-pone.0214296.s009.xlsx-Table_D-S4_Table_Differentially_expressed_mRNAs_in_human_primary_monocytes_after_24_hours_of_LPS_stimulation_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
GSE62974_1_v_0_epas1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
OE-31-YC41_1uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.336046
SARS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.23176
DNA ligase IV complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.346
NR4A2::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.5851
positive regulation of double-strand break repair via nonhomologous end joining	GO Biological Process Annotations 2025	1.0	null
NKTR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.19984
Brain - Cerebellar Hemisphere	GTEx Tissue Gene Expression Profiles 2023	-1.0	-0.928959
WC-09-GD62_0.1uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.425504
Nuclear replisome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.594
GSE129186,GSE129223_0_v_1_aicda_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE223008_5_v_3_calhm6_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
TBX18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.0694
NUP88	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.01048
C11orf96	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.27496
ri1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.532
C2orf81	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.44083
TNS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.74201
Aplastic anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.367
SFPQ	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89495
POU3F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.7611
MRPS21	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.91872
TPRKB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83407
EIF3M	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.48352
EEF1G	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	9.0061
ZNF214	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.2449
GNB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91876
PPP2R1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.12815
GSE163297_0_v_2_doxorubicin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE162739_2_v_1_bap1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
WC-09-GD62_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.344264
SLC16A13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.15572
GSE181959_1_v_2_dextran_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE102505_4_v_2_tunicamycin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
TP73	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.5319
GSE119978,GSE180930_6_v_8_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
Whole body	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
MSMO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36099
LZIC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.44248
GSE210885_5_v_7_klf4_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
POU5F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.1245
E2F7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.8482
Cortical surface area (MOSTest)	GWAS Catalog SNP-Phenotype Associations 2025	1.0	1.02218
Gonadotrophic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.945
PMC7244323-elife-55325-supp3.xlsx-Noordermeer_TP53-KO-Gene_TP53	Rummagene Transcription Factor Associations 2026	1.0	null
DKK3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.44214
GSE166536_3_v_2_docetaxel_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
ULK3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.67725
NOP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.43024
ELMOD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36472
GSE244072_4_v_6_tfeb_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
ARHGAP19	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.34937
ATAD5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.05457
Uterine carcinosarcoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.54
positive regulation of double-strand break repair	GO Biological Process Annotations 2025	1.0	null
PMC9974104-jci-133-159940-s017.xlsx-GT3-INCP-GATA3_Co-down-Symbol_GATA3	Rummagene Transcription Factor Associations 2026	1.0	null
CD-35-BD44_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.289988
Delta DNA polymerase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.302
MAGT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.19943
DNA replication factor A complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.367
CELF4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.25151
GSE154577_13_v_5_plagl1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GMNN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.60919
PHPT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.58061
Salivary gland	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
SPRTN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.38612
GSE158834_12_v_9_palmitic acid_human	RummaGEO Drug Perturbation Signatures	1.0	null
DDX54	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4721
GSE137137_1_v_0_rcor1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GC-04-UF36_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.445694
ERBB3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.1063
negative regulation of DNA recombination	GO Biological Process Annotations 2025	1.0	null
EF-74-KW12_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.371737
KARS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.88446
GSE138672_0_v_1_rabgef1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
UNC45A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.62199
CHMP4A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.22219
Hoxd13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	22.6102
Mouth	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Subcortical volume (MOSTest)	GWAS Catalog SNP-Phenotype Associations 2025	1.0	1.12218
Nuclear telomere cap complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.966
GNL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.86045
CREB3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.2327
RBM47	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.38594
ARFGAP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.00512
GSE142210_2_v_6_panobinostat_human	RummaGEO Drug Perturbation Signatures	1.0	null
MED30	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.07396
Adrenal Gland	GTEx Tissue Gene Expression Profiles 2023	-1.0	-0.768947
GSE111247_14_v_6_temozolomide_human	RummaGEO Drug Perturbation Signatures	1.0	null
HOXA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.0848
IGBP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63573
AC-76-JB92_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.399307
Cells - Cultured fibroblasts	GTEx Tissue Gene Expression Profiles 2023	-1.0	-0.71561
ZNF143	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.3327
GSE166536_1_v_2_docetaxel_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
WC-09-GD62_1uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.410225
Shelterin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.643
Gfi1b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	39.0278
RBMS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.59716
CDKN1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77662
PROSER2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.16929
SYNGR2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.57479
BD-04-NG34_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.258337
GSE158834_12_v_9_palm_human	RummaGEO Gene Perturbation Signatures	1.0	null
COL7A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.50099
SLC5A6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.37182
CEP55	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.7244
PITX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.1697
ZNF76	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.6165
BAG4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.1601
Brain - Cerebellum	GTEx Tissue Gene Expression Profiles 2023	-1.0	-0.875622
GRHL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.7828
MYF5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.02683
SNRPE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.68044
somatic diversification of immunoglobulins involved in immune response	GO Biological Process Annotations 2025	1.0	null
Site of DNA damage	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.384
GSE111061_1_v_0_tofacitinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
ITGA7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.77612
GSE169697,GSE169725_0_v_5_prrx1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE199874_4_v_5_gabpb1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
TBX20	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.5849
GSE252857_1_v_0_klf15_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
AGO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.98162
GSE178714_1_v_2_smad2_human	RummaGEO Gene Perturbation Signatures	1.0	null
BC-14-CG34_1uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.220911
PLK3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.23969
PRR7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.12949
ERF::FOXO1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.3716
PRDX4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.23822
HOXD11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.13542
SIKE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.67664
PSMG4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60783
EE-98-PF86_1uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.407225
GSE222758_0_v_3_clofazimine_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE154577_7_v_9_plagl1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
DAGLB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.70395
RALY	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.2561
AD-16-HL96_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.337504
ANKRD17	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.57371
RANBP9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.80757
PES1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.30078
GSE158834_1_v_9_palm_human	RummaGEO Gene Perturbation Signatures	1.0	null
CF-65-GU65_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.219837
EML4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.2131
PMC11409756-13062_2024_533_MOESM1_ESM.xlsx-Sheet1-Table_S1_Differentially_expressed_genes_DEGs_regulated_by_ZFP64_through_mRNA-seq_ZFP64	Rummagene Transcription Factor Associations 2026	1.0	null
FARS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.87493
PCGF6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.03756
ZBTB14	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.9004
positive regulation of immunoglobulin mediated immune response	GO Biological Process Annotations 2025	1.0	null
MLKL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.43565
GSE140651,GSE140653_2_v_1_med1_human	RummaGEO Gene Perturbation Signatures	1.0	null
GSE234647_1_v_3_regorafenib_human	RummaGEO Drug Perturbation Signatures	1.0	null
PMC7244323-elife-55325-supp3.xlsx-Haapaniemi_TP53-KO-Gene_TP53	Rummagene Transcription Factor Associations 2026	1.0	null
TMED10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75078
GSE164508_1_v_0_bortezomib_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
SNX11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.54788
MIGA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.07602
GSE135352_6_v_4_napabucasin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
BRCA1-C complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.612
AHCTF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.72601
GPRASP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.43107
GSE133213_10_v_3_znrf3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
CARM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.31956
chromosome, telomeric repeat region	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.964
GSE98898_7_v_1_hoxa1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
PMC9974104-jci-133-159940-s017.xlsx-GT3-INCP-GATA3_Co-down-Gene_ID_GATA3	Rummagene Transcription Factor Associations 2026	1.0	null
GSE154464_1_v_3_cdk6_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
DGKA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.20016
GNB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.20947
TTYH1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.31623
Nucleolus	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	4.0
nucleolus	GO Cellular Component Annotations 2025	1.0	null
MRPL50	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.64013
ACADM	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.16337
GSE125014_6_v_3_enzalutamide_human	RummaGEO Drug Perturbation Signatures	1.0	null
DNA damage response	GO Biological Process Annotations 2025	1.0	null
MutLbeta complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.18
GCHFR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.38264
HSPA9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71296
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
E2F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.0751
GSE198982,GSE198986_1_v_2_daunorubicin_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE155836,GSE155839_3_v_2_alvocidib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE202434,GSE202438_7_v_0_talazoparib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
DNA replication preinitiation complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.791
GSE110178_5_v_3_tranylcypromine_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
DCTN5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.02396
Chromatin	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	4.0
METTL2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.04081
CHCHD7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.72336
AFTPH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.10443
PMC8063501__F2	PFOCR Pathway Figure Associations 2024	1.0	null
PMC7498599-41467_2020_18508_MOESM11_ESM.xlsx-GV_RFX-Unnamed_3_RFX1	Rummagene Transcription Factor Associations 2026	1.0	null
FAM89B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.15755
LSM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.18706
PMC7244323-elife-55325-supp3.xlsx-This_paper_TP53-KO-Gene_TP53	Rummagene Transcription Factor Associations 2026	1.0	null
GSE158834_1_v_3_palmitic acid_human	RummaGEO Drug Perturbation Signatures	1.0	null
PMC9277259__F1	PFOCR Pathway Figure Associations 2024	1.0	null
DNASE1L1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.0251
GSE115542_2_v_1_digoxin_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE123105,GSE124556_0_v_2_pcf11_human	RummaGEO Gene Perturbation Signatures	-1.0	null
NR1H4::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.6175
CCNF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53829
Head	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
NR4A2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.487
MARVELD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.23216
GSE186660_2_v_1_nicotine_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
DD-75-HY40_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.249622
UBA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95242
PRKACA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.19487
Nijmegen breakage syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.043
GCA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.74555
TBR1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.8269
FAM171A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57083
GTF2H1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.42045
FABP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.01454
QPCT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.28332
FKBP11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.65829
Diffuse large B-cell lymphoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.519
CYLD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.67762
TTC30B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.97751
Ovarian disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.059
GSE228619_0_v_1_cdh11_human	RummaGEO Gene Perturbation Signatures	1.0	null
Exodeoxyribonuclease V complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.661
PANK4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.00161
RCC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.45578
Nr2e3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	15.9565
KYAT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.3274
GSE162739_7_v_1_bap1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
MutLgamma complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.109
ZKSCAN1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.8361
GSE133213_2_v_3_znrf3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
MED17	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.17638
PMC7833686-mmc5.xlsx-e_q1en30_v1-CEBPD_CEBPD	Rummagene Transcription Factor Associations 2026	1.0	null
PRPF8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.49453
TMEM41B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.77594
BRAT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.13505
Replisome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.481
MAPKAP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60952
Fanconi anaemia nuclear complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.936
FOSB::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.5939
SNAP47	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.34723
FANCM-MHF complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.33
PMC7352566__F1	PFOCR Pathway Figure Associations 2024	1.0	null
FF-28-ES17_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.272299
KCTD5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47706
LTN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.5008
UQCR11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.5837
Brain - Caudate (basal ganglia)	GTEx Tissue Gene Expression Profiles 2023	-1.0	-0.662272
Site of double-strand break	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
GSE239373_0_v_1_mettl3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Retinal telangiectasia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.491
Breast disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.074
Thoracic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.073
GLI1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.31467
HOXB5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.565
GINS4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.97259
SNAI2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.76928
ZNF75A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.563
CDCA4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75081
Chromosome	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	4.0
Nuclear replication fork	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.572
GSE90710_1_v_0_med13_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Kasumi-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.998
CORO1C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.54279
RFX2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.01539
MTO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.72943
TP53	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.2735
YIPF4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.82207
IRF9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.30023
Normocytic anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.242
HAND2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.5427
DDX51	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.06556
GSE223540_2_v_3_anxa2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
negative regulation of double-strand break repair	GO Biological Process Annotations 2025	1.0	null
GSE131649_2_v_8_hemin_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE186620_0_v_1_ascl1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
PMC8841529__F6	PFOCR Pathway Figure Associations 2024	1.0	null
MutLalpha complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.77
MASP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77132
GSE134375_4_v_2_stat3_human	RummaGEO Gene Perturbation Signatures	1.0	null
Ovarian cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.057
GSE134375_3_v_2_stat3_human	RummaGEO Gene Perturbation Signatures	1.0	null
Fanconi anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.416
GSE131649_2_v_3_hemin_human	RummaGEO Drug Perturbation Signatures	1.0	null
Nuclear lumen	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	4.0
ZNF486	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.05519
PHB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.44215
GSE81193_3_v_5_irf3_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE186810,GSE186813_3_v_5_furin_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
Terminal loop	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.806
Ku70:Ku80 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.166
BD-11-DV28_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.659234
REXO2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.44019
GSE195663_7_v_1_cisplatin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
RRP9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.39063
GSE220914_1_v_0_zdhhc2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
CREB3L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.7337
ZNF675	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.4328
GSE169155_3_v_0_acetaminophen_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
Mecom	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	38.4074
NNAT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.4685
DAP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.63183
GINS complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.66
GSE229973_3_v_7_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
Mafb	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	20.001
ECHDC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.06195
AP2M1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.54361
BEX2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.88849