association	dataset	threshold value	standardized value
ChIP_SOX2_18692474	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
Mucopolysaccharidosis II	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.714
rectal cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.901573
BRD-K20030272	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.15369
MYC	ChEA Transcription Factor Targets	1.0	null
HIVEP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.33027
cisgolgi	GeneRIF Biological Term Annotations	1.0	null
VRK1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00362039
NID1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00458287
Inflammation	CTD Gene-Disease Associations	1.0	1.60944
CAPAN-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.01607
NPTX2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00587241
TMEM163	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00535578
BRD-K07278815	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.02939
VCAP	CCLE Cell Line Gene Expression Profiles	1.0	2.18634
EJM	COSMIC Cell Line Gene Mutation Profiles	1.0	null
posterior (caudal) superior temporal cortex (area 22c)_25 pcw_F_12948	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.65832
SNU1066	CCLE Cell Line Gene Expression Profiles	-1.0	-1.90638
PMC7276545__F2	PFOCR Pathway Figure Associations 2024	1.0	null
Disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.388
Exocrine pancreatic insufficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.162
surface	GeneRIF Biological Term Annotations	1.0	null
mantle zone of m2AD	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.42038
Lipid metabolism disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.752
striatum_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.844845
NCIH1755	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34709
Disaccharidase Deficiency	DisGeNET Gene-Disease Associations	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-B9-A8YI-01A-21R-A37K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
mRNA_NR2F2_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
ATP11B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00466356
AK3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.48473
NCI-H1304	COSMIC Cell Line Gene CNV Profiles	1.0	2.06505
PMC3875243__F1	PFOCR Pathway Figure Associations 2024	1.0	null
COR-L279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02732
RNF207	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.09188
A-375	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.908985
HOS	COSMIC Cell Line Gene Mutation Profiles	1.0	null
C2BBE1	CCLE Cell Line Gene Expression Profiles	1.0	1.60882
Lung adenocarcinoma_LUAD_TCGA-55-8094-01A-11R-2241-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
dorsal paracommissural tectal nucleus, m1 part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.54505
Prostate adenocarcinoma_PRAD_TCGA-EJ-5519-01A-01R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC7460641__F3a	PFOCR Pathway Figure Associations 2023	1.0	null
PMC5859839__F11	PFOCR Pathway Figure Associations 2024	1.0	null
Primary hyperaldosteronism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.068
Male infertility	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.66
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles	1.0	null
diabetes mellitus	DISEASES Experimental Gene-Disease Association Evidence Scores	1.0	0.052255
PCI6A	DepMap CRISPR Gene Dependency	1.0	2.97636
Huntington's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.145
Prostate adenocarcinoma_PRAD_TCGA-YL-A8SJ-01B-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Neuronal ceroid lipofuscinosis 3	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.412
Glycoside hydrolase family 31	InterPro Predicted Protein Domain Annotations	1.0	null
LRRC8C	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00760473
PMC9616789__F10a	PFOCR Pathway Figure Associations 2024	1.0	null
fibroblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.084566
hsa-miR-3674	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
BRD-K83846772	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.72273
magnocellular division of VA	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.95977
VMRC-RCW	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HNF1B	JASPAR Predicted Transcription Factor Targets	1.0	null
Allergic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.824
Overnutrition	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.928
dentate (lateral) nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.856997
CALU-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.843084
HCC70	COSMIC Cell Line Gene Mutation Profiles	1.0	null
connective tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.082199
Hyperglycemia	DisGeNET Gene-Disease Associations	1.0	null
IZ in dorsomedial parietal cortex (area 7m)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.02306
Amyotrophic Lateral Sclerosis	DisGeNET Gene-Disease Associations	1.0	null
TEAD4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0066156
AMD1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00575395
membrane-bounded vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.158502
NCKAP1L	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00641833
PMC11252405-41467_2024_50426_MOESM1_ESM.pdf-35-DLX4_DLX4	Rummagene Transcription Factor Associations 2026	1.0	null
GEO	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NHLRC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.46728
lipid metabolism disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.071263
Sly syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.068
BRD-K95417411	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.74687
NCI-H1734	COSMIC Cell Line Gene CNV Profiles	1.0	2.06505
apical	GeneRIF Biological Term Annotations	1.0	null
P-type trefoil, conserved site	InterPro Predicted Protein Domain Annotations	1.0	null
required	GeneRIF Biological Term Annotations	1.0	null
carbohydrate binding	GO Molecular Function Annotations 2015	1.0	null
Spinal nucleus of the trigeminal, oral part, ventrolateral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.1517
IZ in lateral temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-2.25124
SW780	COSMIC Cell Line Gene Mutation Profiles	1.0	null
KYSE-50	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NIM1K	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00895513
small intestine	GTEx Tissue Gene Expression Profiles	1.0	2.18987
plasma membrane	GO Cellular Component Annotations 2015	1.0	null
Vascular dementia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.184
UNK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.3797
Pheochromocytoma and Paraganglioma_PCPG_TCGA-WB-A81P-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Anterior olfactory nucleus, lateral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.63913
apical plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.321201
Kidney renal papillary cell carcinoma_KIRP_TCGA-B9-4115-11A-01R-1758-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Interbrain	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.37572
integral component of plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.768171
BRD-K86845405	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.13947
F11	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0056202
r9 part of the lateral reticular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.08581
HCC1419	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.642078
Pheochromocytoma and Paraganglioma_PCPG_TCGA-WB-A81N-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TrigeminalGanglion	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.0231
endocrine gland	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.23362
lm6 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.639214
RXRA-24833708-LIVER-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
POU2F1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.72606
BRD-K89584810	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.21877
cytoplasmic part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
PXK	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00722055
Cystinosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.194
PDHB	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00411642
PMC3000288__F1	PFOCR Pathway Figure Associations 2024	1.0	null
BRD-K74949371_-666_MCF7_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
DCST1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00598696
Coccidiosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.006
BRD-K73689413	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.10312
m1AD (DM) part of periaqueductal gray	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.95897
BRD-K74302837	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.65676
GSE157233_2_v_4_a1cf_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
PMC4082627-12864_2014_6197_MOESM8_ESM.xlsx-GATA3_only-Nearest_Ensembl_GATA3	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-K98133478	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.28802
KP-N-YN	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PMC2820080__F4	PFOCR Pathway Figure Associations 2023	1.0	null
mediodorsal nucleus of thalamus_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.93715
GSE96641_5_v_2_esrp2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
embryonic structure	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
Retinal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.096
Perturb_5711_KO_Dgcr8_SRP043436	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-5.88337
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5402-11A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Krabbe disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.984
large intestine cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.649323
Influenza	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.523
PMC2748802__F18	PFOCR Pathway Figure Associations 2024	1.0	null
amniotic fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.437589
PMC7702050__F2	PFOCR Pathway Figure Associations 2024	1.0	null
Melanoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.311
PU.1-20513432-MACROPHAGES-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
Liver carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.667
Integumentary system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.048
Anterior cingulate area, ventral part, 6a	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.34646
SKM1	CCLE Cell Line Gene Expression Profiles	-1.0	-2.38059
RNF128	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00596208
PMC12048643-44318_2025_409_MOESM3_ESM.xlsx-regulonTargets-FOSB_FOSB	Rummagene Transcription Factor Associations 2026	1.0	null
esophagitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.275089
germ layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.485935
PBXIP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00557946
organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
BRD-K46015322	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.12932
Autoimmune disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.303
Mitochondrial myopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.117
Chronic Respiratory Failure	DisGeNET Gene-Disease Associations	1.0	null
TTBK2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00832292
ochronosis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.628457
HCC461	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.867026
MONO-MAC-6	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Malabsorption	DisGeNET Gene-Phenotype Associations	1.0	null
amygdaloid complex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.75814
Benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.527
Endocrine system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.478
PMC7266663__F7	PFOCR Pathway Figure Associations 2024	1.0	null
Glycogen storage disease III	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.563
MDA-MB-231	COSMIC Cell Line Gene Mutation Profiles	1.0	null
limb-girdle muscular dystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.585
r10 part of gigantocellular reticular area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.10412
H3K4me3_Caco-2_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
intracellular membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
Polycystic ovary syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.777
viscus	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Leukopenia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.038
ATXN2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00551092
abnormality of the kidney	HPO Gene-Disease Associations	1.0	null
amygdaloid complex_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.862992
PMC5120243__F5	PFOCR Pathway Figure Associations 2024	1.0	null
Nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.754
Disease	DISEASES Curated Gene-Disease Association Evidence Scores 2025	1.0	5.0
FAIM2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00567903
hsa-miR-4753-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
POLR2A_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cell periphery	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.25864
BRD-K91628074	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.16166
mantle zone of DgSe	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.03831
Eye disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.297
prepositus hypoglossal nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.04684
DNM1L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.81683
MAGED2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.51735
laminin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.08817
gastric adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.130988
ACN	GDSC Cell Line Gene Expression Profiles	-1.0	-1.69048
Anterior olfactory nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.04882
pontobulbar body	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.888392
GPATCH1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00511405
HDLM2	CCLE Cell Line Gene Expression Profiles	-1.0	-1.61956
SLAMF6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00530509
esophageal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.208914
acute diarrhea	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.460129
GSE148692,GSE148695_1_v_0_satb2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
NFYA	JASPAR Predicted Transcription Factor Targets	1.0	null
BRD-K53326976	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.65113
Mouth disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.495
Mild cognitive impairment	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.021
LIG3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00660656
cell projection	GO Cellular Component Annotations 2015	1.0	null
Retrosplenial area, ventral part, layer 6a	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.9823
Mucopolysaccharidosis IV	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.625
U-266	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CRO-AP2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SYK_KD_GDS3609_440_human_MCF10A	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
PMC3071979__F2	PFOCR Pathway Figure Associations 2024	1.0	null
SNU-407	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MDA-MB-436	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Upper respiratory tract disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.732
ASPM	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00501279
BRD-K66352426	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.25369
PMC3933272__F4	PFOCR Pathway Figure Associations 2024	1.0	null
endoplasmic reticulum-golgi intermediate compartment	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.501881
abnormality of the upper urinary tract	HPO Gene-Disease Associations	1.0	null
HCC1937	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.645247
A388	COSMIC Cell Line Gene CNV Profiles	1.0	2.06505
MAPK8IP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00483204
differentiated	GeneRIF Biological Term Annotations	1.0	null
BRD-A10134527	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.63847
Common cold	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.152
CASP9	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00731167
PMC3811010__F3	PFOCR Pathway Figure Associations 2024	1.0	null
Mediodorsal nucleus of the thalamus, central part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.07562
PMC7521272__F4	PFOCR Pathway Figure Associations 2023	1.0	null
Bone inflammation disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.081
Orbital area, ventrolateral part, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.15256
BRD-K56437119	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.3732
LIMK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.64428
TE-4	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Disease of metabolism	DISEASES Curated Gene-Disease Association Evidence Scores 2025	1.0	5.0
BRD-K90571714	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.00155
EPHA4_drugactivation_229_GSE26523	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	1.88442
Entorhinal area, lateral part, layer 2b	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.2934
BRD-K68450812	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.51309
Perturb_16535_KO_Repin1_SRP108279	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	20.0
U138	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.07454
cell junction	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.455214
VPS37B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00562376
Vulvitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.265
BRD-K24950073	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.1118
UBQLN4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.63045
NR3C1-21868756-MCF10A-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
MUSTN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.70243
preventing	GeneRIF Biological Term Annotations	1.0	null
GSE193177_1_v_2_st266_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
disease of metabolism	DISEASES Experimental Gene-Disease Association Evidence Scores	1.0	0.052255
RIPK4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00585747
shielding	GeneRIF Biological Term Annotations	1.0	null
seed	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.074363
PMC4634137-ncomms9549-s7.xlsx-ZF_Hair_cell_data-Unnamed_1_CREBZF	Rummagene Transcription Factor Associations 2026	1.0	null
MOLM-13	COSMIC Cell Line Gene Mutation Profiles	1.0	null
FABP6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00791783
NB10	DepMap CRISPR Gene Dependency	1.0	3.97199
PMC10661700-41525_2023_383_MOESM2_ESM.xlsx-Supp_Table6_gnomAD_EUR_GCR-SYMBOL_NR3C1	Rummagene Transcription Factor Associations 2026	1.0	null
HLFA	CCLE Cell Line Gene Expression Profiles	-1.0	-1.79468
Ovarian disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.539
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4713-01A-01R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SAR1A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00508356
STRADB	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0055469
apical part of cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
Gastrointestinal allergy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.374
apical complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.44799
Hemorrhage	DisGeNET Gene-Disease Associations	1.0	null
BRD-K01793276	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.79004
BRD-K98927248	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.18363
COV413A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.49873
SOX9_01_309	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	2.07192
BRD-K96969336	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.08749
Celiac disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.633
glycogen storage disease ii	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.394491
periventricular stratum of r6Ve	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.02097
Blindness	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.991
PELP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00348324
BRD-K25878187	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.16407
Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-7046-01A-11R-1965-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE120248,GSE120252_1_v_0_macf1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
INCENP	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00783177
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-G8-6326-01A-11R-2213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC8009526__F1	PFOCR Pathway Figure Associations 2023	1.0	null
HTR1D	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00916052
layer 4 of ERCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.29729
Vitamin metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.635
ABC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.43345
BRD-K49865102_PD-0325901_HT29_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Perturb_16533_KO_Cdk8_SRP351257	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-20.0
E2F8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.97546
HT29	BioGPS Cell Line Gene Expression Profiles	1.0	1.35739
FOXA1-27270436-VCAP-HUMAN-PROSTATE-CARCINOMA	ChEA Transcription Factor Targets 2022	1.0	null
Chronic kidney disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.439
integral component of membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.668559
LRP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.007206
golgi apparatus	GO Cellular Component Annotations 2015	1.0	null
external part of AOD	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.45488
cell-cell contact zone	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.16298
posterior (caudal) superior temporal cortex (area 22c)_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.39479
SNU-398	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.867026
RARA_01_51	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	2.13245
LYST	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00536794
Kidney renal papillary cell carcinoma_KIRP_TCGA-MH-A562-01A-11R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-374b	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.921135
Primary somatosensory area, upper limb, layer 2/3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.12363
BRD-K96560179	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.2659
r1 part of lateral pontine nuclei	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.32965
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
Gastroesophageal reflux disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.461
BRD-K56343971_PLX-4032_HT29_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SERPINB2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00536662
LN340	CCLE Cell Line Gene Expression Profiles	-1.0	-2.37967
Gonadal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.652
Superior colliculus, motor related, intermediate gray layer, sublayer c	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.26965
dorsolateral prefrontal cortex_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.56622
BRD-K78755361	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.41729
endoderm	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.578416
Neurodegenerative disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.288
lambdoid septal zone	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-3.78837
SNURF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89246
essential	GeneRIF Biological Term Annotations	1.0	null
inner SZ in posteror frontal cortex (motor cortex)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.14799
SOX2	ChEA Transcription Factor Targets	1.0	null
hepatoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.071927
LNCAP-CLONE-FGC	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Morbid obesity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.614
Muscular atrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.691
VOGLIBOSE	DGIdb Drug Targets 2026	1.0	1.65412
SNG-M	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PMC8836071__F9	PFOCR Pathway Figure Associations 2024	1.0	null
PMC7710791__F2	PFOCR Pathway Figure Associations 2024	1.0	null
Vein disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.586
PMC8170419__F3	PFOCR Pathway Figure Associations 2024	1.0	null
nuclear	GeneRIF Biological Term Annotations	1.0	null
CD86	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00613723
Mood disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.997
beta-fructofuranosidase activity	GO Molecular Function Annotations 2015	1.0	null
GSE148692,GSE148695_7_v_4_satb2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
MS4A14	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00496318
Hyperlipidemia	DisGeNET Gene-Disease Associations	1.0	null
PMC10746608-427_2023_709_MOESM4_ESM.xlsx-SOX2_targets_enrichment-Unnamed_436_SOX2	Rummagene Transcription Factor Associations 2026	1.0	null
Dystrophia	DisGeNET Gene-Disease Associations	1.0	null
JHOM2B	CCLE Cell Line Gene Expression Profiles	1.0	2.40499
caco-2/15 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.73062
BRD-K19492738	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.73129
JVM-3	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K57080016_selumetinib_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K75869048	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.0871
MPP3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0073661
OAW-42	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GM97	BioGPS Cell Line Gene Expression Profiles	1.0	1.67882
BRD-K42789863	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.00239
Brain Lower Grade Glioma_LGG_TCGA-FG-5963-02A-12R-A29R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K84203638_4-[(1-methyl-2-oxo-1,2-dihydroquinolin-4-yl)oxy]-N-(4-methylpyridin-2-yl)butanamide_HT29_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
duodenal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.525955
GCG	Pathway Commons Protein-Protein Interactions	1.0	null
ganglioneuroma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.384451
NCI-H2196	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.959279
Alcohol dependence	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.292
cell projection	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
stomach cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.123305
BRD-K59670689	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.49033
NCI-H2066	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HOP-92	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PMC3018162__F1	PFOCR Pathway Figure Associations 2023	1.0	null
Median preoptic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.33792
Type 2 diabetes mellitus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.486
lytic vacuole	LOCATE Predicted Protein Localization Annotations	1.0	null
primary auditory cortex (core)_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.42775
BRD-K65496998	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.4636
ZR751	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.641795
GSE199255,GSE199356_0_v_5_pds5a_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
tail of caudate	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.83249
PMC8423434-mmc7.xlsx-SOX2_HENSM-Genes_n_2733_SOX2	Rummagene Transcription Factor Associations 2026	1.0	null
IL6ST	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00555875
NCI-H1793	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K94194278	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.71319
MDM4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00619901
Residual stage of open angle glaucoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.082
BRD-K61978712	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.16723
hsa-miR-520b	TargetScan Predicted Conserved microRNA Targets	1.0	1.26663
Congenital disorder of glycosylation type IIb	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.896
Hyperglycemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.381
genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.218715
RL95-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
TLK1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0052027
D-Fructose	HMDB Metabolites of Enzymes	1.0	null
MRPL19	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00619583
Parkinson Disease	DisGeNET Gene-Disease Associations	1.0	null
BRD-K87779720	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.44625
celecoxib_homo sapiens_gpl8300_gse11237	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
events	GeneRIF Biological Term Annotations	1.0	null
BRD-K03449891_foretinib_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
JHH5	CCLE Cell Line Gene Expression Profiles	1.0	1.67561
Skin Callus	DisGeNET Gene-Disease Associations	1.0	null
NCIH2170	CCLE Cell Line Gene CNV Profiles	-1.0	-1.40352
Sucrose	HMDB Metabolites of Enzymes	1.0	null
COLO-680N	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Pigmentation disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.153
DAPP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00841982
BRD-K22878149_sb 205607_MCF7_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
A172	CCLE Cell Line Gene Expression Profiles	-1.0	-1.62976
Prostate adenocarcinoma_PRAD_TCGA-CH-5766-01A-11R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K18334106	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.25471
NOP10	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00533758
BRD-K63504496	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.12408
BRD-K31059261	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.05023
BRD-K24595067	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.15645
PMC6072467__F4	PFOCR Pathway Figure Associations 2024	1.0	null
layer 6 of PrS	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.62074
superficial stratum of r7Lim	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.10412
Perturb_7755_KD_NOLC1_SRP316009	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	11.4684
Obstructive sleep apnea	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.506
Pyelonephritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.303
PMC8106838__F1	PFOCR Pathway Figure Associations 2023	1.0	null
Adenoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.005
colonic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.67312
TRIM33_KD_GDS4071_449_human_HMEC-TR mammary epithelial cell line	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
SLC22A12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00576007
Lysosomal acid lipase deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.082
CCDC88B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52977
PRKCB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.49644
gastric cardia carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.605762
BRD-K49865102_PD-0325901_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
UPB1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00590891
SW1271	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Hyperthyroidism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.335
HT1376	CCLE Cell Line Gene CNV Profiles	1.0	1.52572
ECC2	DepMap CRISPR Gene Dependency	1.0	2.1097
Intestinal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.835
periventricular part of StrSe	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.54505
BRD-K04238122	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.69387
BRD-K07812227	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.60891
ZNF347	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95936
PMC2880289__F6	PFOCR Pathway Figure Associations 2024	1.0	null
PMC9476852__F6	PFOCR Pathway Figure Associations 2024	1.0	null
Macular retinal edema	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.414
intracellular organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.838728
brush border	GO Cellular Component Annotations 2015	1.0	null
DICER1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00964355
BRD-K76100122	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.08466
PMC5629025-elife-27159-fig1-data1.xlsx-Direct_AR_target_genes-Common_down-regulated_genes_AR	Rummagene Transcription Factor Associations 2026	1.0	null
hsa-miR-3691-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
ZNF445	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15565
hsa-miR-302a	TargetScan Predicted Conserved microRNA Targets	1.0	1.11641
Eye degenerative disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.122
HER2_KO_GDS4056_567_human_breast biopsies	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
Thrombosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.505
Bladder Urothelial Carcinoma_BLCA_TCGA-GV-A3JX-01A-11R-A20F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC11384093-mmc1.xlsx-886-drug_target-VDR_VDR	Rummagene Transcription Factor Associations 2026	1.0	null
intermediate stratum of DgSe	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.13538
Lipid storage disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.517
candidiasis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.121881
HEC-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
colorectal cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.201943
SCCPDH	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00563331
NCIH23	CCLE Cell Line Gene CNV Profiles	-1.0	-2.07722
cellular_component	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.2921
Retrosplenial area, dorsal part, layer 6a	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.76327
actin cytoskeleton	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.326078
PMC6935452__F2	PFOCR Pathway Figure Associations 2024	1.0	null
STAT3-23295773-U87-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
X-linked monogenic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.814
PMC4085347__F3	PFOCR Pathway Figure Associations 2024	1.0	null
SK-LU-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BCL2L12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.30589
SH3GL2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0048289
P30-OHK	COSMIC Cell Line Gene Mutation Profiles	1.0	null
KNS-42	COSMIC Cell Line Gene Mutation Profiles	1.0	null
urinary tract	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.361527
Peripheral nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.593
Variable age at onset electroclinical syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.616
intermediate stratum of r8Lim	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.11176
GSE203308_7_v_5_brf1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Disorder of sexual development	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.205
RCC-JW	COSMIC Cell Line Gene Mutation Profiles	1.0	null
primary somatosensory cortex (area S1, areas 3,1,2)_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.80461
hsa-miR-548c-3p	TargetScan Predicted Conserved microRNA Targets	1.0	1.45615
BRD-K58041870	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.87552
primary metabolic process	GO Biological Process Annotations 2015	1.0	null
colorectum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.86204
RDH11	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00463536
Uterus	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.21856
PMC3730684__F1	PFOCR Pathway Figure Associations 2023	1.0	null
HSD17B7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00499049
CD2AP	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00571828
midline nuclear complex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.37836
TE-11	COSMIC Cell Line Gene Mutation Profiles	1.0	null
LUZP1-20508642-ESCS-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
Leukodystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.179
rostral putamen	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.882046
lysosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.435775
hnf1betar177x	GeneRIF Biological Term Annotations	1.0	null
extracellular organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
enterocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.49442
Cervix disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.256
Brachydactyly	DisGeNET Gene-Disease Associations	1.0	null
studies	GeneRIF Biological Term Annotations	1.0	null
NCI-H660	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PMC4178306__F5	PFOCR Pathway Figure Associations 2023	1.0	null
Congenital heart disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.031
myofibroblast cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.490619
Malabsorption, Ctcae	DisGeNET Gene-Phenotype Associations	1.0	null
Organ system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.196
Pyelitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.333
PMC3018162__F1	PFOCR Pathway Figure Associations 2024	1.0	null
outer CP in rostral cingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.843213
parasitic protozoa infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.442418
Hyperinsulinism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.455
BRD-K09951645_dabrafenib_HT29_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Congenital disorder of glycosylation	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.374
pallidal septum	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.23014
GSE208096_1_v_0_progesterone_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-IA-A83V-01A-11R-A355-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K08753635	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.56952
PMC3875243__F1	PFOCR Pathway Figure Associations 2023	1.0	null
HCC1569	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Epididymitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.325
primary auditory cortex (core)_25 pcw_F_12948	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.2625
carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.64857
Primary visual area, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.30248
oocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.361005
NCR3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00537864
VZ in dorsomedial extrastriate cortex (V2)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.872673
BCLAF1_01_214	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.77529
CSAD	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00448042
PMC7816290__F7	PFOCR Pathway Figure Associations 2023	1.0	null
extracellular region part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
occluding junction	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.528388
BL-41	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Glycogen storage disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.39
BRD-K65633211	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.76684
affects	GeneRIF Biological Term Annotations	1.0	null
JHH-7	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Gastric Cardia Adenocarcinoma	DisGeNET Gene-Disease Associations	1.0	null
Digestion and absorption	Reactome Pathways 2024	1.0	null
Perturb_119_KD_Fto_SRP314220	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-20.0
BRD-K34561361	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.14969
ATG16L1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00569066
Amyotrophic lateral sclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.224
MYLK3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00500203
PANC-08-13	COSMIC Cell Line Gene Mutation Profiles	1.0	null
disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.16649
Retinal degeneration	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.096
m1 part of paranigral nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.16641
extracellular vesicular exosome	GO Cellular Component Annotations 2015	1.0	null
Adenocarcinoma	DisGeNET Gene-Disease Associations	1.0	null
Hyperplasia	CTD Gene-Disease Associations	1.0	1.56459
PMC6615902__F4	PFOCR Pathway Figure Associations 2023	1.0	null
Perturb_7782_KD_ASCC3_SRP023199	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	20.0
MN-60	COSMIC Cell Line Gene Mutation Profiles	1.0	null
periventricular stratum of m2ADL	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.29101
late endosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.182422
arsenic trioxide_homo sapiens_gpl201_gse48441	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
animal	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Diabetic neuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.258
BRD-K04680784	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.60143
lateral superior olive	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.94939
SOX17_OE_GDS3300_124_human_HESC (CA1 and CA2)	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
NCI-H1436	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K95885906_HEXAMETHYLQUERCETAGETIN_HCC515_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K45631723	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.17666
PMC4590705-13062_2015_86_MOESM1_ESM.xlsx-Gene_A_-_TP53-Unnamed_20_TP53	Rummagene Transcription Factor Associations 2026	1.0	null
esophagus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.499223
glycocalyx	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.454418
small intestine cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.0462
Respiratory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.359
duodenum	HPA Tissue Protein Expression Profiles	1.0	1.71998
Nose disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.163
rostral subdivision of paraventricular nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.31417
fetus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.062259
OCIP5X	DepMap CRISPR Gene Dependency	1.0	2.08129
MAFK	ENCODE Transcription Factor Targets	1.0	null
JHH6	CCLE Cell Line Gene CNV Profiles	-1.0	-1.56746
Hemorrhage	CTD Gene-Disease Associations	1.0	1.02596
hsa-miR-302d	TargetScan Predicted Conserved microRNA Targets	1.0	1.11641
colonic adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.08135
ENPP2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00529485
SW1088	CCLE Cell Line Gene Expression Profiles	-1.0	-1.47632
connective tissue disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.044578
intermediate stratum of m1AD	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.89006
superficial stratum of r9BL	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.03649
PLA2G1B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00607242
epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.38093
OAW28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.33075
EDNRA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00766707
BRD-K13402127	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.23975
NB-4	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Arteriosclerotic cardiovascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.345
BRD-K25193509	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.01145
BRD-K57080016_selumetinib_HT29_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K45350681	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.21631
STAG2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.54334
Normocytic anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.146
Peripheral vascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.087
XXYLT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61614
SRD5A1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00808304
PMC5806469__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Dengue disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.055
primary oocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.629101
PPP4R2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00555562
GR-ST	COSMIC Cell Line Gene Mutation Profiles	1.0	null
lower	GeneRIF Biological Term Annotations	1.0	null
Intermediate coronary syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.819
BRD-K96768352	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.32665
NCI-H23	COSMIC Cell Line Gene Mutation Profiles	1.0	null
KNS-62	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32309
EKVX	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Barrett'S Adenocarcinoma	DisGeNET Gene-Disease Associations	1.0	null
Varicose veins	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.646
dorsal septopreoptic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.16978
BRD-K37470774	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.31094
RRM1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00745729
Carbohydrate metabolic disorder	DISEASES Curated Gene-Disease Association Evidence Scores 2025	1.0	5.0
effects	GeneRIF Biological Term Annotations	1.0	null
Rectal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.437
Perturb_16916_KD_Maf1_SRP375944	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	9.38166
GSE211286_7_v_6_tcf12_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
deficiency	GeneRIF Biological Term Annotations	1.0	null
cytoskeletal part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.338128
PLS3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00672298
r1 part of ventral parvicellular reticular formation	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.18348
MDA-MB-361	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PMC6377303-NIHMS1504983-supplement-2.xlsx-AR_signature-To_AR	Rummagene Transcription Factor Associations 2026	1.0	null
membrane raft	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.703507
mRNA_SOX9_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
CHP-212	COSMIC Cell Line Gene Mutation Profiles	1.0	null
diabetes mellitus	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.552851
PMC4775314__F3	PFOCR Pathway Figure Associations 2024	1.0	null
Pneumonia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.543
GSE165122_0_v_3_metformin_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
Nonalcoholic Steatohepatitis	DisGeNET Gene-Disease Associations	1.0	null
primary somatosensory cortex (area S1, areas 3,1,2)_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.0003
GSE148695,GSE167284_2_v_1_satb2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
CLINDAMYCIN-PO4	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.62178
kinetic	GeneRIF Biological Term Annotations	1.0	null
ATXN7L1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.44808
vector	GeneRIF Biological Term Annotations	1.0	null
BRD-A19037878_trichostatin A_HCC515_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TRIM69	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00580171
BRD-K94888615	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.4182
Skin Cutaneous Melanoma_SKCM_TCGA-DA-A1HW-06A-11R-A18U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
IGLL1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0044936
BRD-K12524155	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.00289
retention	GeneRIF Biological Term Annotations	1.0	null
Alcohol use disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.151
esophageal carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.552851
Head and Neck squamous cell carcinoma_HNSC_TCGA-P3-A5QA-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
OSC20	DepMap CRISPR Gene Dependency	1.0	3.74918
BRD-K75618633	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.11423
Varicocele	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.321
Malnutrition	DisGeNET Gene-Disease Associations	1.0	null
PMC6071020__F5	PFOCR Pathway Figure Associations 2024	1.0	null
CCRT CEM	BioGPS Cell Line Gene Expression Profiles	1.0	2.41625
CXCL12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00373668
Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A71D-01A-12R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC10951899-mmc1.pdf-7-ZNF804A_ZNF804A	Rummagene Transcription Factor Associations 2026	1.0	null
Alpha-D-Glucose	HMDB Metabolites of Enzymes	1.0	null
PTGER3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0067383
leaf lamina	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.162299
CLU	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00613642
PMC7772402__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Peripheral artery disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.73
intracellular	GeneRIF Biological Term Annotations	1.0	null
Human immunodeficiency virus infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.421
Primary somatosensory area, barrel field, layer 5	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.18629
Hepatobiliary disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.428
TRPT1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0055183
BRD-K41895714_AS-605240_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
JHU-022	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Prenatal Exposure Delayed Effects	CTD Gene-Disease Associations	1.0	1.53481
BRD-K75688032	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.51151
BRD-K11113009	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.28203
intracellular part	GO Cellular Component Annotations 2015	1.0	null
Sucrase-Isomaltase Deficiency, Congenital	DisGeNET Gene-Disease Associations	1.0	null
BRD-K82919339	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.61922
PMC6425986__F4	PFOCR Pathway Figure Associations 2024	1.0	null
laterostriatal stripe	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.17791
inferior olive, medial nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-2.1655
BRD-K08995282	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.25656
oral candidiasis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.255946
BRD-K78247419	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.16139
PMC7273480__F9	PFOCR Pathway Figure Associations 2024	1.0	null
PMC4742115__F5	PFOCR Pathway Figure Associations 2024	1.0	null
PMC10661700-41525_2023_383_MOESM2_ESM.xlsx-Supp_Table2_ChinaMAP_GCR-SYMBOL_NR3C1	Rummagene Transcription Factor Associations 2026	1.0	null
TUBA1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.92201
A-431	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.959279
PMC4829553__F3	PFOCR Pathway Figure Associations 2024	1.0	null
CORO1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.32936
Sudden Infant Death Syndrome	DisGeNET Gene-Disease Associations	1.0	null
SARM1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00557299
Head and Neck squamous cell carcinoma_HNSC_TCGA-KU-A6H8-01A-21R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MEL-JUSO	COSMIC Cell Line Gene Mutation Profiles	1.0	null
gut	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
TUBA1C	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00692858
MT-CO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.78704
Cardiomyopathy_Myocardial tissue_GSE5406	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-2.43611
oglycan	GeneRIF Biological Term Annotations	1.0	null
CELGOSIVIR	DGIdb Drug Targets 2026	1.0	1.65412
golgi-associated vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.186397
bed nucleus of the stria terminalis, medioseptal division	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.22058
CW-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K23598860	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.0101
extracellular region	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.185469
KP-N-YS	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SNX11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.76945
KYSE-180	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CardiacMyocytes	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.55362
ABC-1	COSMIC Cell Line Gene CNV Profiles	1.0	2.06505
Nucleus ambiguus, ventral division	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.08082
intracellular membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
culture condition	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.469211
Spinal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.327
ODC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.34512
gut	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.324605
BRD-K06261202	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.66396
GPR141	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00762483
UACC-257	GDSC Cell Line Gene Expression Profiles	-1.0	-1.48379
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-4722-01A-01R-1436-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Muscle Damage	DisGeNET Gene-Phenotype Associations	1.0	null
PRKACA	KEA Substrates of Kinases	1.0	null
viscus	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
NCI-H1651	COSMIC Cell Line Gene Mutation Profiles	1.0	null
superficial layers of caudal presubiculum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.74194
HIVEP2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00531286
KCNA6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00445932
Diabetic ketoacidosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.371
BRD-K54606188_(+)-JQ1_HA1E_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
POMC	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00772249
SNU-C2B	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K02927989	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.59657
Glycogen storage diseases	Reactome Pathways 2014	1.0	null
H2AC11	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00532705
Gestational diabetes	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.262
cell part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.33467
HCT-15	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H1573	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-HC-A631-01A-11R-A29R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
giardiasis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.995283
HCC1954	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04644
FU97	COSMIC Cell Line Gene Mutation Profiles	1.0	null
OVKATE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13006
Gonorrhea	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.542
PMC7905684__F1	PFOCR Pathway Figure Associations 2023	1.0	null
Pyoderma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.066
Central nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.609
SNU283	CCLE Cell Line Gene Expression Profiles	1.0	1.71342
PMC12048643-44318_2025_409_MOESM3_ESM.xlsx-regulonTargets-HNF1A_HNF1A	Rummagene Transcription Factor Associations 2026	1.0	null
CHEK2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00838029
ddpiv	GeneRIF Biological Term Annotations	1.0	null
Dysentery	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.208
Psoriasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.026
rostral ventrolateral reticular area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.12503
PMC7925335__F2	PFOCR Pathway Figure Associations 2024	1.0	null
voglibose	CTD Gene-Chemical Interactions	1.0	null
EHBP1L1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.71285
GBP5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00636519
Coronary stenosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.075
PMC5808955__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Cystic Fibrosis	DisGeNET Gene-Disease Associations	1.0	null
Lateral septal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.26965
Urinary system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.424
Cholera	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.138
PL-21	COSMIC Cell Line Gene Mutation Profiles	1.0	null
hungarian	GeneRIF Biological Term Annotations	1.0	null
upper (rostral) rhombic lip	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.959773
state	GeneRIF Biological Term Annotations	1.0	null
RARB	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00456497
orbital frontal cortex_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.977586
urogenital system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.326432
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.93279
Disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.295
KYSE-180	COSMIC Cell Line Gene CNV Profiles	1.0	2.06505
Skin disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.027
Colitis	DisGeNET Gene-Disease Associations	1.0	null
vomeralnasalorgan.VMO.	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.912379
G6PD	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00463927
nutritional deficiency disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.064317
hsa-miR-4686	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
Immune system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.363
ABCB1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00657699
Food allergy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.375
SOX2-21211035-LN229_GBM-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-EJ-5516-01A-01R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Respiratory Failure	DisGeNET Gene-Disease Associations	1.0	null
UBQLN4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0059505
Carbohydrate metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.694
EXTL2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00580202
GSE156667_0_v_1_lrrc8a_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
PMC5749411__F5	PFOCR Pathway Figure Associations 2024	1.0	null
SPRING1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.79308
Uterine disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.39
Extrinsic cardiomyopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.034
AKT1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00256757
biosynthesis	GeneRIF Biological Term Annotations	1.0	null
Gangliosidosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.845
GJC1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00617257
adenoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.184424
rectal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.053
differentiation	GeneRIF Biological Term Annotations	1.0	null
BRD-K98431828	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.41349
Perturb_9257_KO_Il17a_ERP107271	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	7.92047
Collagen disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.062
Neonatal diabetes	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.209
IPC-298	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.37224
BRD-K71817712	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.29875
GM2 gangliosidosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.694
BT-20	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PMC4348787__F7	PFOCR Pathway Figure Associations 2023	1.0	null
BRD-K68970089	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.22408
U-2 OS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.12346
Phenylketonuria	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.351
organ system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.384822
Precancerous Conditions	CTD Gene-Disease Associations	1.0	1.17497
hsa-miR-590-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
diabetes	GeneRIF Biological Term Annotations	1.0	null
Duchenne muscular dystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.541
single-organism metabolic process	GO Biological Process Annotations 2015	1.0	null
superficial stratum of r5Tr	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.04047
Sucrase-isomaltase deficiency	ClinVar Gene-Phenotype Associations	1.0	null
BICR18	CCLE Cell Line Gene CNV Profiles	1.0	1.32842
SMAD4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.5566
Primary visual area, layer 6a	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.08869
colorectal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.649718
Wholebrain	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.48045
MZ in rostral midinferior temporal cortex (area 36)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.91931
endosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.321201
transcription	GeneRIF Biological Term Annotations	1.0	null
whole body	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
r6 part of parvocellular medial vestibular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.01533
BRD-K43594798	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.0026
membrane-bounded vesicle	GO Cellular Component Annotations 2015	1.0	null
onchocerciasis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.305948
BRD-K16478699_PLX-4720_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
medial amygdala, anteroventral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.10459
RSPO1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00718553
ventrolateral prefrontal cortex_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.32924
CCK-81	COSMIC Cell Line Gene Mutation Profiles	1.0	null
myofibroblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.20119
SLC8A1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0050024
600MPE	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.900244
Constipation	DisGeNET Gene-Phenotype Associations	1.0	null
Developmental disorder of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.593
NCI-H446	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H2198	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16466
small intestine	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.36652
ADCY9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51073
r2 part of lateral pontine nuclei	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.30395
cell-cell junction	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.52675
Communication disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.148
NCI-H727	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.834428
primary motor cortex (area M1, area 4)_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.63934
LRRC4C	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00589532
NCI-H716	Sanger Dependency Map Cancer Cell Line Proteomics	1.0	2.29644
plant form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.077844
type 2 diabetes mellitus	DISEASES Experimental Gene-Disease Association Evidence Scores	1.0	0.052255
Kidney Chromophobe_KICH_TCGA-KO-8407-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MIFEPRISTONE	DGIdb Drug Targets 2026	1.0	0.551375
SW1116	GDSC Cell Line Gene Expression Profiles	1.0	1.70978
COLO-792	COSMIC Cell Line Gene Mutation Profiles	1.0	null
layer IIIa of caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.862463
dorsolateral SC part of the periaqueductal gray	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.4759
NCI-H2172	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.1001
Intellectual disability	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.201
barrett's adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.069
SHMT2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00516312
colorectal adenocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.9118
NR3C1	ChEA Transcription Factor Targets	1.0	null
BRD-K42247636	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.26387
nervous system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
Heart conduction disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.832
PMC8298376__F5	PFOCR Pathway Figure Associations 2024	1.0	null
caveola	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.256925
SNUC4	CCLE Cell Line Gene Expression Profiles	1.0	1.75451
colonic adenocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.940066
BRD-K69543414	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.19606
PNP	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00315972
Rectum adenocarcinoma_READ_TCGA-AG-3732-01A-11R-1660-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE188870,GSE188871_4_v_3_kat7_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
H513	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HNF1B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00561304
Autoimmune disease of skin and connective tissue	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.195
histiocytosis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.119967
SHROOM3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00887479
percent	GeneRIF Biological Term Annotations	1.0	null
cytoplasm	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
dorsal part of m1A	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.77759
cell type cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.524974
Neuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.674
type	GeneRIF Biological Term Annotations	1.0	null
BRD-K65107903	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.11638
intermediate stratum of r6Tr	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.0457
BRD-K86373784	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.86659
filariasis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.160387
LN18	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.20626
OCI-AML2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00095
SJRH30	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PMC3730684__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Glaucoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.216
IRF2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00513899
abdominal symptom	HPO Gene-Disease Associations	1.0	null
Hyperinsulinemic hypoglycemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.82
plant	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.063077
CD58	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0054298
Substance dependence	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.349
BRD-K78828094	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.45426
Major Depressive Disorder	DisGeNET Gene-Disease Associations	1.0	null
OCI-M1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22591
Periodontal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.291
Congenital sucrase-isomaltase deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.225
Neoplasms	CTD Gene-Disease Associations	1.0	1.28058
SNU119	CCLE Cell Line Gene Expression Profiles	-1.0	-1.62958
Barrett Epithelium	DisGeNET Gene-Disease Associations	1.0	null
phenotype	GeneRIF Biological Term Annotations	1.0	null
head	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
Myopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.436
extracellular matrix part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.051007
female reproductive system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
lateral septal nucleus, dorsal part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.38814
epitope	GeneRIF Biological Term Annotations	1.0	null
BRD-K18629365	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.62081
r5 part of the oral Sp5 subnucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.04047
U2904	DepMap CRISPR Gene Dependency	1.0	2.16171
digestion	GO Biological Process Annotations 2015	1.0	null
Sphingolipidosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.458
HCT-116	COSMIC Cell Line Gene Mutation Profiles	1.0	null
mdck cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.541377
BRD-K70057550	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05657
MTR	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00434218
POU3F2	ChEA Transcription Factor Targets	1.0	null
all	GWASdb SNP-Phenotype Associations	1.0	0.029619
Dermatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.686
functional gastric disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.264431
SNRPG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.3201
r9 portion of ambiguous motor nucleus (postmigratory)	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.37873
EC-GI-10	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Parasitic protozoa infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.792
cytoplasmic part	GO Cellular Component Annotations 2015	1.0	null
responsible	GeneRIF Biological Term Annotations	1.0	null
Primary visual area, layer 4	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.17791
transport	GeneRIF Biological Term Annotations	1.0	null
GSE96641_3_v_4_esrp2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
hnf1alphat539fsdelc	GeneRIF Biological Term Annotations	1.0	null
PRKD1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00491863
Intestinal disaccharidase deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.865
BRD-K88934376	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.12628
PANC0504	CCLE Cell Line Gene CNV Profiles	-1.0	-1.52639
Steatotic liver disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.253
TESK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.02564
colon adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.95996
lateral (parvicellular) part of MD	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.03249
SET	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0081821
Diabetic autonomic neuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.606
Autoimmune disease of musculoskeletal system	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.745
Diabetic macular edema	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.083
PMC5808955__F1	PFOCR Pathway Figure Associations 2023	1.0	null
QRICH1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00714286
BRD-K41604824	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.61814
BRD-K68247783	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.00881
sucrase-isomaltase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	2.4674
Autonomic nervous system neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.041
membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.26604
Hirata disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.928
Oligospermia	CTD Gene-Disease Associations	1.0	1.29256
Viral infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.1
Skin cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.048
Neuroblastoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.041
external granular (germinal) layer of lower rhombic lip	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.52302
nervous system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.042936
ABL1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00418617
hypersensitivity reaction disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.268687
BRD-K37507671	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.39451
organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
AMPD2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00667802
BRD-K43654313	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.65283
ChIP_TBX3_20139965	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
parasitic infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.460506
hydrolase activity, hydrolyzing o-glycosyl compounds	GO Molecular Function Annotations 2015	1.0	null
Cell type cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.951
Silent myocardial infarction	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.02
Sleep apnea	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.706
duodenum	HPA Tissue Gene Expression Profiles	1.0	1.49275
Mesothelioma_MESO_TCGA-SC-A6LM-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC12172627-NIHMS2085635-supplement-5.xlsx-E2F1_GENIE_Results-Unnamed_1_E2F1	Rummagene Transcription Factor Associations 2026	1.0	null
Cholestasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.021
subpallial septum	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.13538
plantlet	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.190408
Medial septal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.54505
sucrose	GeneRIF Biological Term Annotations	1.0	null
plicamycin	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.06775
Fabry Disease	DisGeNET Gene-Disease Associations	1.0	null
Eating disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.204
Respiratory failure	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.96
EPHB2_drugactivation_228_GSE26523	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.36422
Primary visual area, layer 2/3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.58097
cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
NCI-H1792	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ileal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.291008
GNRHR	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00814125
liminal part of the r5 alar plate	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.03872
Ileus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.416
vesicle	GO Cellular Component Annotations 2015	1.0	null
GSE165122_2_v_3_metformin_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
BRD-K81418486_vorinostat_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
intracellular organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.348725
BRD-K47690679	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.3268
SLC30A3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00750561
striatum_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.046
PMC8161999__F6	PFOCR Pathway Figure Associations 2024	1.0	null
SCAMP5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0066438
supragenual nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.082
BRD-K51791049	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.16375
BRD-K74948793	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.62103
SLC25A24	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78319
GSE73381,GSE73382_0_v_1_hira_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Aspirin allergy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.121
BRD-K26852477	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.73691
SARC9371	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SW403	DepMap CRISPR Gene Dependency	1.0	5.31454
biological_process	GO Biological Process Annotations 2015	1.0	null
Disease by infectious agent	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.379
Candidiasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.074
superficial stratum of r5BL	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.00525
mantle zone of DTTh	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.05044
ALDH1A1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00427073
SUZ12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00353457
SF295	GDSC Cell Line Gene Expression Profiles	-1.0	-1.99923
hsa-miR-4633-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
anterior amygdaloid area	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.17583
CP in midlateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.65752
IFNAR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89248
antropyloric mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.179609
BFTC-905	COSMIC Cell Line Gene CNV Profiles	1.0	2.06505
TNFAIP8L2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00441701
BRD-K99962919	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.04409
P63_DEPLETION_GDS2534_63_human_ME180 cervical carcinoma cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
CHST1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00640368
TT	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Autoimmune disease of gastrointestinal tract	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.758
PMC11926233-41540_2025_507_MOESM1_ESM.pdf-16-RORA_RORA	Rummagene Transcription Factor Associations 2026	1.0	null
shoot	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.070279
PMC7887593-ADVS-8-2003526-s002.xlsx-TT_AR_vs_BR-Gene_name_AR	Rummagene Transcription Factor Associations 2026	1.0	null
Lateral reticular nucleus, magnocellular part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.88336
endocrine pancreas	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.118307
BRD-K30821056	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.1724
BRD-K86630280	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.24763
DTX2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04954
BRD-K88977610	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.66935
gastrointestinal tract	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
hsa-miR-4735-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
NCI-H1693	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.32477
lateral portion of the shell	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.00392
PMC5066615-supp_30.18.2093_Supplemental_Table_S1.xlsx-GR_YBX1_and_HRSP1_down_1_5_fold-Unnamed_1_YBX1	Rummagene Transcription Factor Associations 2026	1.0	null
cerebellar cortex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.842231
reproductive system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.23362
CRCP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.81753
plasma membrane raft	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.256925
hepatocyte	GeneRIF Biological Term Annotations	1.0	null
Cognitive disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.206
GABRG2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0054917
spanning component of plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.233101
VTCN1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00847315
PMC9942993-pone.0281645.s002.xlsx-AR-as_non-adaptive-ENSEMBL_AR	Rummagene Transcription Factor Associations 2026	1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2807-03A-01T-0734-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K91470977	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.27039
celiac disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.851173
BRD-K49005954	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.44291
U266B1	CCLE Cell Line Gene Expression Profiles	-1.0	-1.80547
clinical	GeneRIF Biological Term Annotations	1.0	null
TC-YIK	GDSC Cell Line Gene Expression Profiles	1.0	2.26034
Anxiety disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.119
SERPINB8	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00648073
BRD-K95672029	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.18922
Liver cirrhosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.847
Factor VIII deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.156
Lung squamous cell carcinoma_LUSC_TCGA-56-8082-01A-11R-2247-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Neuro D	MotifMap Predicted Transcription Factor Targets	1.0	null
nutrition disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.246098
BRD-K24970278	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.19025
ABI3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00671489
Abducens nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.54505
NCI-H810	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.68846
Neoplasm Metastasis	DisGeNET Gene-Phenotype Associations	1.0	null
periventricular stratum of r3Lim	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.1453
19356222-SuppTable2	GeneSigDB Published Gene Signatures	1.0	null
LDHC	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00662633
Dumping syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.255
intracellular part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.841482
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13973
hsa-miR-520e	TargetScan Predicted Conserved microRNA Targets	1.0	1.26663
germ cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.161273
HIPK1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00512553
LILRA4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00686613
Hypertrophic Obstructive Cardiomyopathy	DisGeNET Gene-Disease Associations	1.0	null
non-alcoholic fatty liver	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.296
NCI-H510A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.908985
PMC7952134__F4	PFOCR Pathway Figure Associations 2024	1.0	null
PMC8660617__F14	PFOCR Pathway Figure Associations 2024	1.0	null
membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.790564
AP1AR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92057
Superior colliculus, motor related, deep gray layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.5262
TRPM2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00603176
Myocarditis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.023
TM31	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36319
Postpiriform transition area, layers 3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.04349
p1 portion of the paranigral nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.76957
Ovarian dysfunction	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.757
Physical disorder	DISEASES Curated Gene-Disease Association Evidence Scores 2025	1.0	5.0
SNU668	DepMap CRISPR Gene Dependency	1.0	5.23512
intestinal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.053
DKKL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.93193
DTX3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.32094
NCI-H2030	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MAP3K14	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0064928
RHOXF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.31705
r2 part of prepontine raphe nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.4759
nucleus of the central acoustic tract	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.73347
Kidney renal clear cell carcinoma_KIRC_TCGA-B8-5551-01A-01R-1541-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Fabry disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.411
fibroblast cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.093408
Diabetes mellitus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.61
BRD-K73523458	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.64072
Hematologic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.637
BRD-K65564503	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.21897
Perturb_118_KD_Fto_SRP314220	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-20.0
abomasum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.107824
DGKZ	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00727037
Endosulfan	CTD Gene-Chemical Interactions	1.0	null
PMC4046179__F5	PFOCR Pathway Figure Associations 2024	1.0	null
GSE169697,GSE169725_1_v_4_prrx1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
KCNJ6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0061843
hsa-miR-539	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
r6 part of trigeminal transition zone	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.24087
SUM52PE	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.15792
Prostate adenocarcinoma_PRAD_TCGA-HC-7736-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ventral paracommissural tectal nucleus, m1 part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.89006
r6 (gustatory) part of solitary complex	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.19424
FZD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.56835
parvocellular part of the r9LRt	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.15314
ESRRG	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00682044
glucosidase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	2.4674
CW-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles	1.0	null
BRD-K42271016	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.26042
Nervous system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.211
oculomotor nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.923107
ovary	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.89309
superficial stratum of Hb	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.11653
BRD-K53896147	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.50828
HCC1500	CCLE Cell Line Gene CNV Profiles	-1.0	-1.92871
PPARD	ChEA Transcription Factor Targets	1.0	null
Spinal nucleus of the trigeminal, oral part, middle dorsomedial part, ventral zone	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.40028
MOLT4	BioGPS Cell Line Gene Expression Profiles	1.0	0.88033
GSE188870,GSE188871_4_v_2_kat7_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
VZ in septal region	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.40874
BRD-K33005275	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.29857
NCIH1385	CCLE Cell Line Gene Expression Profiles	1.0	1.84966
NUGC-3	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Disease	Reactome Pathways 2014	1.0	null
disease	GWASdb SNP-Disease Associations	1.0	0.0263
Heart disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.566
GSE148692,GSE148695_2_v_4_satb2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
ALVA31	BioGPS Cell Line Gene Expression Profiles	1.0	0.984238
BRD-K05070188	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.29568
CHD4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00580384
r5 part of A5 noradrenergic cell group	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.26452
abnormality of the gastrointestinal tract	HPO Gene-Disease Associations	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-WB-A81S-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Nasopharyngitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.902
disease of metabolism	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.728547
BRD-K75981085	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.47264
BRD-K95121261	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.14126
Cell type benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.452
PMC5859839__F11	PFOCR Pathway Figure Associations 2023	1.0	null
SLC18A1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00526548
NUDT22	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.46131
ZNF436	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.14298
magnocellular (medial) division of MD	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.71285
hrt-18 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.971552
BRD-K71944493	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.61594
competent	GeneRIF Biological Term Annotations	1.0	null
GSE198165,GSE198166_5_v_10_zfp266_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
liver cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.071522
BRD-K16686330	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.30257
Coronary Heart Disease	DisGeNET Gene-Disease Associations	1.0	null
PMC4348787__F7	PFOCR Pathway Figure Associations 2024	1.0	null
PMC9942993-pone.0281645.s002.xlsx-AR-as_all-ENSEMBL_AR	Rummagene Transcription Factor Associations 2026	1.0	null
respiratory system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.612152
PMC6127811__F2	PFOCR Pathway Figure Associations 2024	1.0	null
AXL	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00611291
GSE91015_0_v_1_aire_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Dextrin	HMDB Metabolites of Enzymes	1.0	null
GSE206400_1_v_0_nusinersen_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
CNTN4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00606046
primary auditory cortex (core)_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.937484
BICR 31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.27212
BRD-K38831170	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.45602
DPH1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.98231
ITGB3BP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.09375
Muscular dystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.868
MSR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00676451
SN12C	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K52913754	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.10122
PMC9491322__F10	PFOCR Pathway Figure Associations 2024	1.0	null
Functional diarrhea	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.226
NCI-H1437	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.843084
P-type trefoil	InterPro Predicted Protein Domain Annotations	1.0	null
Enterocyte_Large intestine_Human	CellMarker Gene-Cell Type Associations	1.0	null
BRD-K86884344	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.09678
sw-480 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.237513
Lung carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.228
PMC5766549__F4	PFOCR Pathway Figure Associations 2024	1.0	null
ulcerative colitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.381852
NCI-H1395	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.834428
golgi apparatus part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.231315
BRD-K20435953	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.32185
hsa-miR-520a-3p	TargetScan Predicted Conserved microRNA Targets	1.0	1.11641
BRD-K09635314_-666_NOMO1_6.0_h_80.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PMC4742115__F5	PFOCR Pathway Figure Associations 2023	1.0	null
BRD-K76210487	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.73158
NB7	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Autosomal recessive disease	DISEASES Curated Gene-Disease Association Evidence Scores 2025	1.0	5.0
Cervical cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.242
PMC6891791__F4	PFOCR Pathway Figure Associations 2023	1.0	null
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.19156
Acquired immunodeficiency syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.397
lateral septal nucleus, intermedio-intermediate part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.19537
cytoskeleton	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.409869
beta-fructofuranosidase activity	GO Molecular Function Annotations 2023	1.0	null
BRD-K11620284	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.35636
HSPA1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69775
Digestion of dietary carbohydrate	Reactome Pathways 2014	1.0	null
GSE203308_14_v_5_brf1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
BRD-A19500257_geldanamycin_A549_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
DEF8	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00614492
BRD-K71109636	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.96401
PMC12048643-44318_2025_409_MOESM3_ESM.xlsx-regulonTargets-JUN_JUN	Rummagene Transcription Factor Associations 2026	1.0	null
GSE165122_2_v_1_metformin_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
ARPC4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00384459
raphe magnus nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.872537
IGF1_OE_GDS3484_540_human_MCF-7	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
remaining	GeneRIF Biological Term Annotations	1.0	null
BRD-K02562327_-666_MCF7_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
intracellular organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
BRD-A84923154	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05881
SF295	COSMIC Cell Line Gene Mutation Profiles	1.0	null
posteroventral (inferior) parietal cortex_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.34367
FOXA1-33576154-HUMAN-LIVER-PROSTATECANCER	ChEA Transcription Factor Targets 2022	1.0	null
mRNA_NIPBL_20720539	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.27133
Hypoglycemic coma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.607
BRD-K29246335	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.54743
HCC1395	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.88799
SIGIRR	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00613219
BRD-K55852567	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01401
BRD-K74855272	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.48079
BRD-K07029108	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.06527
hsa-miR-26b-5p	MiRTarBase microRNA Targets	1.0	null
Meckel's diverticulum	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.098
JEKO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.31046
BRD-K94580036_-666_HEPG2_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
parvicellular interstitial nucleus of the posterior commissure	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.03831
NCI-H226	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.53372
ZNF610	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.44176
dorsolateral prefrontal cortex_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.15865
DTYMK	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00323289
Prostate adenocarcinoma_PRAD_TCGA-KK-A8II-01A-11R-A36G-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Nutrition disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.93
OlfactoryBulb	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.01966
BRD-K66707905	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.16809
Obesity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.928
r5 (gustatory) part of solitary complex	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.26965
Autonomic nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.802
enteroendocrine cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.824431
r6 part of ventral gigangocellular reticular area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.04967
MEWO	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HSD11B2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00662888
NCIH1048	CCLE Cell Line Gene CNV Profiles	-1.0	-2.3514
r4 liminal central gray	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.24876
H2AC12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00542236
Amyloidosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.097
gastrointestinal tract	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.35809
chaperone	GeneRIF Biological Term Annotations	1.0	null
Amino acid metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.473
Retrosplenial area, dorsal part, layer 6b	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.53968
Acarbose	DrugBank Drug Targets	1.0	null
LRRC37A2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00507464
BATF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.0286
GSE116433_1_v_0_glucosamine_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
ZFX_02_172	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	4.16993
Asthma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.87
BRD-K34004579	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.14491
HCC4017	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.948419
NCI-H441	COSMIC Cell Line Gene Mutation Profiles	1.0	null
abnormality of the abdominal organs	HPO Gene-Disease Associations	1.0	null
multicellular organismal process	GO Biological Process Annotations 2015	1.0	null
BRD-K68530167	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.44026
Supplemental somatosensory area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.21532
crypt	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.10005
Alzheimer Disease	DisGeNET Gene-Disease Associations	1.0	null
BRD-K77713205	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.42744
COVID-19	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.714
Prostate adenocarcinoma_PRAD_TCGA-2A-A8VT-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.545
posterior (caudal) superior temporal cortex (area 22c)_26 pcw_F_12949	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.911735
hnf1beta	GeneRIF Biological Term Annotations	1.0	null
caudal portion of VFC (area 44)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.916852
Mediodorsal nucleus of the thalamus, medial part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.16978
Orbital area, ventrolateral part, layer 2/3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.1998
Myocardial infarction	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.473
intrinsic component of plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.767715
esophageal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.34384
EZH2_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lens disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.721
dorsolateral prefrontal cortex_37 yrs_M_12303	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.29827
BRD-K23326916	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.07318
SW684	COSMIC Cell Line Gene Mutation Profiles	1.0	null
mantle zone of r8Lim	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.38115
Prostate adenocarcinoma_PRAD_TCGA-CH-5788-01A-11R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K30220159	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.02878
SNU738	CCLE Cell Line Gene Expression Profiles	-1.0	-1.81386
Urinary tract infection	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.051
Supplemental somatosensory area, layer 6b	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.51623
BRD-A19633847_PERHEXILINE MALEATE_HEPG2_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ZNF217	ChEA Transcription Factor Targets	1.0	null
medial vestibular nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.52994
OVCAR-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.63368
Sarcoma_SARC_TCGA-DX-A3UB-01A-11R-A30C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Superior olivary complex, lateral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.72821
intestine	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.41646
Acute myocardial infarction	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.744
SG in caudal perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.30027
Inherited metabolic disorder	DISEASES Curated Gene-Disease Association Evidence Scores 2025	1.0	5.0
glycogen storage disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.354131
Hemorrhoid	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.714
RASSF8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04097
nimesulide	CTD Gene-Chemical Interactions	1.0	null
intracellular membrane-bounded organelle	GO Cellular Component Annotations 2015	1.0	null
BRD-K49530286	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.04312
vacuole	LOCATE Predicted Protein Localization Annotations	1.0	null
VAL	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PMC3071979__F2	PFOCR Pathway Figure Associations 2023	1.0	null
MOG	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00784352
phenotypic abnormality	GWASdb SNP-Phenotype Associations	1.0	0.029653
molecular layer of rostral subiculum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.907388
Angioedema	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.021
BRD-K41895714_AS-605240_HT29_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
single-organism process	GO Biological Process Annotations 2015	1.0	null
animal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.64006
CD40	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00393187
BRD-K68580555	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.04574
lateral hypothalamic area, anterior part	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.990952
BRD-A15086915	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.13415
KANSL1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00683193
DLG5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71069
AIF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9415
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
HSC4	CCLE Cell Line Gene CNV Profiles	1.0	2.47923
Osteoporosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.842
extracellular vesicle	GO Cellular Component Annotations 2015	1.0	null
C2BBe1	GDSC Cell Line Gene Expression Profiles	1.0	1.69925
small intestine	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
Pelvic varices	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.788
YIPF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.2497
hsa-miR-4666-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
BRD-K16715205	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.48464
organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.894868
BRD-K67141726	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.69375
NAMALWA	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Diseases of carbohydrate metabolism	Reactome Pathways 2024	1.0	null
hsa-miR-548b-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
BRD-K04462989	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.25861
brush border	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
AMPD1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0059613
LAMA-84	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SMPD1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00499297
NCI-H810	COSMIC Cell Line Gene CNV Profiles	1.0	2.06505
BRD-K23860926	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.01702
BRD-K68937579	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.8753
Perturb_3417_KO_Cdx2_SRP093647	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	20.0
stomach	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.535833
non-Hodgkin lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.12
ZNF513	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00570591
deep white layer of SC	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.24876
membrane part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
Cerebral degeneration	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.13
CREB_DEPLETION_GDS3487_41_human_K562 myeloid leukemia cell line	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
PKP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00638248
BRD-K54132860	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.08552
abnormality of the genitourinary system	HPO Gene-Disease Associations	1.0	null
BCL6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.98631
golgi apparatus	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.991225
lung	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.62991
hypocotyl	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.081288
sporozoan form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.111052
preoptic	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-2.70238
colon cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.682294
disrupts	GeneRIF Biological Term Annotations	1.0	null
STX4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0056202
BRD-A20463452	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.24355
Nucleus ambiguus, dorsal division	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.03251
OVCAR-8	GDSC Cell Line Gene Expression Profiles	-1.0	-2.54104
SNU175	CCLE Cell Line Gene Expression Profiles	1.0	2.01096
Perturb_15966_KO_Tbet_SRP063567	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-4.63467
Gastroparesis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.762
KYAT1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00505559
superficial stratum of r3BI	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.11221
PMC2866657-pone.0010547.s001.xls-ERG-high-GENES_UPREGULATED_IN_ERGhigh_ERG	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-K67950754	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.16891
BRD-K25757432	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.74151
GSE223008_5_v_3_calhm6_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
H2BC12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00803764
secondary oocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.664775
Autoimmune disease of the nervous system	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.341
JHH7	CCLE Cell Line Gene Expression Profiles	1.0	1.79973
colonic cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.799791
GJB4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00492252
NCI-H2085	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Glycogen storage disease I	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.374
PMC2792912__F6	PFOCR Pathway Figure Associations 2024	1.0	null
Schindler disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.036
Urticaria	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.128
culture medium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.726507
Thymus	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.6055
dorsolateral prefrontal cortex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.66902
RSKR	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00577376
small_intestine	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	2.2603
OC314	CCLE Cell Line Gene Expression Profiles	-1.0	-1.51786
PIM3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00545027
Pallidum, dorsal region	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.16114
Connective tissue disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.233
Viral hepatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.06
would	GeneRIF Biological Term Annotations	1.0	null
extracellular membrane-bounded organelle	GO Cellular Component Annotations 2015	1.0	null
VSTM1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00685064
ZNF397	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.52813
periventricular stratum of r4Lim	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.24876
SOX2-21211035-LN229-GBM	ChEA Transcription Factor Targets 2022	1.0	null
Breast disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.71
PMC7281113__F2	PFOCR Pathway Figure Associations 2024	1.0	null
PMC7784996__F3	PFOCR Pathway Figure Associations 2024	1.0	null
SNU719	CCLE Cell Line Gene Expression Profiles	1.0	1.55038
rectum	HPA Tissue Gene Expression Profiles	1.0	0.881263
SNU869	CCLE Cell Line Gene CNV Profiles	1.0	3.25528
r5 part of parvocellular medial vestibular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.08869
RLN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.55566
ARTN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.01491
Anteromedial nucleus, ventral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.85916
carbohydrate metabolism disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.574605
BRD-K77119472	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.26262
SMG1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00554887
epithelial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.58289
excretory gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.312232
Lymphatic system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.446
MOLT-16	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PMC6627624__F7	PFOCR Pathway Figure Associations 2024	1.0	null
PMC2880289__F6	PFOCR Pathway Figure Associations 2023	1.0	null
MDAMB134VI	CCLE Cell Line Gene CNV Profiles	1.0	1.98152
Gastrointestinal system benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.534
IRF7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00552878
PMC3870072__F4	PFOCR Pathway Figure Associations 2024	1.0	null
Primary bacterial infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.784
GSE171837_3_v_2_bortezomib_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
primary somatosensory cortex (area S1, areas 3,1,2)_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.08584
BRD-K78344913	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.81079
CD248	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90024
AKT1_knockout_213_GSE39699	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	1.62696
r7 part of trigeminal transition zone	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.39833
PMC5831949__F3	PFOCR Pathway Figure Associations 2024	1.0	null
Coronary Artery Disease	DisGeNET Gene-Disease Associations	1.0	null
Galactosemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.072
pyloric mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.319498
SNU1033	CCLE Cell Line Gene CNV Profiles	1.0	1.40945
kidney disease	GWASdb SNP-Disease Associations	1.0	1.23741
mucous cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.39467
Starvation	DisGeNET Gene-Phenotype Associations	1.0	null
BRD-K13089873	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.08072
plant embryo	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.079127
villus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.16708
PIGW	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00714617
rectum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.237267
PGR	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00565369
BRD-K19139070	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.44898
Pancreatic adenocarcinoma_PAAD_TCGA-HZ-7924-01A-11R-2156-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GRIK5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00592102
sucrose alpha-glucosidase activity	GO Molecular Function Annotations 2023	1.0	null
Perturb_16917_KD_Maf1_SRP375944	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	20.0
caco2	GeneRIF Biological Term Annotations	1.0	null
Perturb_6669_KO_FGFR3/FGFR4_SRP386785	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	5.0529
stratum radiatum of caudal CA1	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.5636
PMC7460641__F3a	PFOCR Pathway Figure Associations 2024	1.0	null
BRD-K10704442	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.00612
sucrose alpha-glucosidase activity	GO Molecular Function Annotations 2015	1.0	null
colonic cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.02466
PMC8355560__F2	PFOCR Pathway Figure Associations 2024	1.0	null
OVTOKO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22436
SELE	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00687483
Osteoarthritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.44
HT-115	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PMC7258858__F1	PFOCR Pathway Figure Associations 2024	1.0	null
NCIH1355	CCLE Cell Line Gene Expression Profiles	-1.0	-2.4705
PMC6815035__F5	PFOCR Pathway Figure Associations 2024	1.0	null
Physical disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.788
Niemann-Pick disease type A	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.295
all	HPO Gene-Disease Associations	1.0	null
RB1_KD_GSE50532_660_human_OSTEOBLASTS	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
GLB1L3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.88995
seedling	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.079127
Prostate adenocarcinoma_PRAD_TCGA-CH-5737-01A-11R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MMP28	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00611798
Lateral reticular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.00224
r8 part of lateral reticular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.86873
PUS3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83635
CDC25C	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00547081
OGDHL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.757
LB647-SCLC	COSMIC Cell Line Gene Mutation Profiles	1.0	null
eis	GeneRIF Biological Term Annotations	1.0	null
Scopolamine	DrugBank Drug Targets	1.0	null
BRD-K69038251	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.17377
BRD-K07501326	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.07479
PIGG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.98229
GRANTA-519	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.40487
LAMP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00474392
t67-small-intestine_consensus	MoTrPAC Rat Endurance Exercise Training	1.0	1.33148
BRD-K39016838	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.48776
PMC6627624__F7	PFOCR Pathway Figure Associations 2023	1.0	null
GSS	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00513127
inner SZ in superolateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.424
PMC8859251__F9	PFOCR Pathway Figure Associations 2024	1.0	null
BRD-K63803358	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.09108
OVISE	COSMIC Cell Line Gene Mutation Profiles	1.0	null
reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.057695
Entorhinal area, lateral part, layer 5	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.32433
PMC3811010__F3	PFOCR Pathway Figure Associations 2023	1.0	null
PMC5629025-elife-27159-fig1-data1.xlsx-Direct_AR_target_genes-Common_genes_AR	Rummagene Transcription Factor Associations 2026	1.0	null
RUNX2-22187159-PCA-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
FXR2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95255
Symphysis Pubis Dysfunction	DisGeNET Gene-Disease Associations	1.0	null
BRD-K98474331	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.28402
NDUFA13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.29155
Muscular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.395
Impotence	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.542
external encapsulating structure	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.084501
BRD-K44265418	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.51243
MAPK3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00428323
BRD-K46152990	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.65505
PMC9942993-pone.0281645.s002.xlsx-AR_as_all_as_maintained-SYMBOL_AR	Rummagene Transcription Factor Associations 2026	1.0	null
TEF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.70206
PMC2576041__F9	PFOCR Pathway Figure Associations 2023	1.0	null
vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.671593
systemic mycosis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.059736
GSE148692,GSE148695_1_v_4_satb2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
BRD-K79517375	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.09397
Perturb_15371_KD_TP53_SRP294453	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-20.0
constitutive	GeneRIF Biological Term Annotations	1.0	null
BRD-K45799338	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.24841
Vaginal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.255
exocrine pancreas	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.540981
DB	CCLE Cell Line Gene CNV Profiles	-1.0	-1.71054
Lafora disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.76
GSE223008_5_v_1_calhm6_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
CAPAN-1	COSMIC Cell Line Gene CNV Profiles	1.0	2.06505
Gaucher's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.38
lymphatic system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.069509
KCNS1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00461405
BRD-K47620421	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.12148
PD-128907	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.03144
HTR1E	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00759224
PMC5961061__F1	PFOCR Pathway Figure Associations 2023	1.0	null
PMC8995879-Table_1.xlsx-exome_variants_MAF_0_01-Gencode_34_hugoSymbol_MAF	Rummagene Transcription Factor Associations 2026	1.0	null
Epilepsy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.572
DBNDD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78191
intermediate stratum of PalSe	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.19537
colon	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.94411
PLCXD3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00452805
Tooth disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.063
BRD-K02783902	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.42739
BRD-K14121002	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.53375
AR_01_323	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	2.62416
substitution	GeneRIF Biological Term Annotations	1.0	null
cortex	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.931099
stomach carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.133929
TUBB4A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00767315
vacuole	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.4676
ZNF484	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.49019
naringenin	CTD Gene-Chemical Interactions	1.0	null
UBOX5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00474226
Thyroid gland disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.666
OVCA 429	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.96781
CHRNB4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00591662
Adermatoglyphia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.221
PMC7710791__F2	PFOCR Pathway Figure Associations 2023	1.0	null
SLAMF8	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00803676
BRD-K20259776	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.01235
hippocampus (hippocampal formation)_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.827174
NCI-H1993	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K00381858	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.31357
Monogenic disease	DISEASES Curated Gene-Disease Association Evidence Scores 2025	1.0	5.0
Peptic ulcer disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.403
monogenic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.191719
HCC4011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.842217
membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
importance	GeneRIF Biological Term Annotations	1.0	null
GP1BA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00545687
central nervous system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
GSE164494_1_v_2_rab22a_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
t61-colon_female_2w	MoTrPAC Rat Endurance Exercise Training	1.0	2.36166
BRD-K94637240	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.2393
primary auditory cortex (core)_16 pcw_M_12287	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.991248
autonomic nervous system neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.124967
GSE126621,GSE126920_1_v_0_dppa4_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Anterior olfactory nucleus, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.12455
PMC9658582__F5	PFOCR Pathway Figure Associations 2024	1.0	null
OVCA433	COSMIC Cell Line Gene CNV Profiles	1.0	2.06505
Nephritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.181
AGTPBP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69208
hindlimb	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.066938
GALE	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00497732
Frontal pole, layer 2/3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.77625
GRPR	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00705354
BRD-K53662389	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.43913
AtrioventricularNode	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.907525
Disease of metabolism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.657
intrinsic component of membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
barrett's esophagus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.15274
PMC4750533__F1	PFOCR Pathway Figure Associations 2024	1.0	null
BRD-K61414850	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.63794
GATA2-21186366-BM-HSCS-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
EHMT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92291
KMT2E	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96052
PMC3419980-leu201249x2.xls-RUNX1-ETO_siRE_ChIPSeq_peaks_ge-gene_name_RUNX1	Rummagene Transcription Factor Associations 2026	1.0	null
ATXN7L2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00637923
ZNF217-24962896-MCF-7-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
BRD-K88317944_VU0420364-1_HT29_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
AKT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.73399
GNA15	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0039285
CML-T1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K86025005	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.13282
magnocellular diagonal band nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.04706
Bladder disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.577
PMC8435905__F1	PFOCR Pathway Figure Associations 2024	1.0	null
BRD-K47584662	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.21695
BRD-K17315445	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.0569
NSD2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00546518
protozoan form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.07349
inner SZ in medial temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.4571
TAS2R60	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00754674
Hypoglycemia	DisGeNET Gene-Disease Associations	1.0	null
MDAMB436	CCLE Cell Line Gene CNV Profiles	-1.0	-1.55463
PMC5120243__F5	PFOCR Pathway Figure Associations 2023	1.0	null
Gerstmann-Straussler-Scheinker Disease	DisGeNET Gene-Disease Associations	1.0	null
amniotic cavity	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.198478
Coronary Arteriosclerosis	DisGeNET Gene-Disease Associations	1.0	null
BRD-K94817443	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05621
Gout	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.879
SLC15A1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00513836
subapical complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.335864
Drug-Induced Liver Injury	CTD Gene-Disease Associations	1.0	1.49839
intermediate stratum of IC	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.13095
microvillus	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.69768
NCI-H740	COSMIC Cell Line Gene Mutation Profiles	1.0	null
peripheral nervous system neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.06996
epithelioma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.50575
Type 1 diabetes mellitus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.377
intercalated nucleus of medulla	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.934612
mRNA_RAD21_21589869	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
Synucleinopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.791
BRD-K58140298	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.3179
plasma membrane part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
Acne	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.148
INSULIN, REGULAR, HUMAN	DGIdb Drug Targets 2026	1.0	0.254481
Infertility	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.614
GHRL	Pathway Commons Protein-Protein Interactions	1.0	null
polysensory temporal cortex (area 22p)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.828112
PMC7880998-41467_2021_21255_MOESM8_ESM.xlsx-Sup_Data_5_TWIST_Panel-Gene_Name_TWIST1	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-K07437885	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.2379
SkeletalMuscle	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.834593
symptoms	GeneRIF Biological Term Annotations	1.0	null
Adrenal gland hyperfunction	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.116
JHU-029	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MCM10	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00850166
KYSE-270	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.50985
OVCAR-5	GDSC Cell Line Gene Expression Profiles	1.0	1.90596
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A4NE-01A-11R-A27V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Perturb_15395_KD_RB1_SRP271262	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-20.0
UACC-893	COSMIC Cell Line Gene Mutation Profiles	1.0	null
mucous gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.36405
Anus disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.447
BRD-K64890080_BI 2536_SKMEL1_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HCC-44	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Acidosis, Lactic	DisGeNET Gene-Phenotype Associations	1.0	null
IFNB1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00515507
TOV-112D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.54444
PMC3439136__F2	PFOCR Pathway Figure Associations 2024	1.0	null
Colon carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.239
caco-2/tc7 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.319863
Lateral reticular nucleus, parvicellular part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	3.87794
HUH-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PPP2R2C	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00490372
IZ in caudal midinferior temporal cortex (area TF)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.27577
BRD-K65737790	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.93614
PMC5278230__F7	PFOCR Pathway Figure Associations 2024	1.0	null
Insulin Resistance	DisGeNET Gene-Phenotype Associations	1.0	null
BRD-K27109474	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.00039
Metal metabolism disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.139
MKN7	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.27164
PMC7917105__F4	PFOCR Pathway Figure Associations 2023	1.0	null
PMC10661700-41525_2023_383_MOESM2_ESM.xlsx-Supp_Table8_gnomAD_AFR_GCR-SYMBOL_NR3C1	Rummagene Transcription Factor Associations 2026	1.0	null
Lymphatic system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.363
CCNA2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00514903
superficial stratum of r6Tr	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.01841
explained	GeneRIF Biological Term Annotations	1.0	null
Neuronal ceroid lipofuscinosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.494
Nasal cavity disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.015
leukemia	GeneRIF Biological Term Annotations	1.0	null
PMC12619835-41467_2025_66007_MOESM12_ESM.xlsx-KLF5_activated_H3K27ac_T3M4-Nearest_Gene_Name_KLF5	Rummagene Transcription Factor Associations 2026	1.0	null
Ovarian cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.06
tight junction	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.49418
BRD-K42769174	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.34768
Cystic fibrosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.617
Bronchopulmonary dysplasia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.221
ACO1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00518659
BRD-K42776812	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.19432
tissues, cell types and enzyme sources	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
PMC5741957__F3	PFOCR Pathway Figure Associations 2024	1.0	null
r6 part of spinal trigeminal nucleus, pars oralis	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.01971
dorsal tier of thalamus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.05044
Entorhinal area, lateral part, layer 3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.37143
NUGC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.8575
sucrose metabolic process	GO Biological Process Annotations 2023	1.0	null
TALL1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32836
hsa-miR-520d-3p	TargetScan Predicted Conserved microRNA Targets	1.0	1.11641
POFUT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.62525
CALU3	CCLE Cell Line Gene Expression Profiles	-1.0	-1.68678
BOLA3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.48403
membrane-bounded vesicle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
loss	GeneRIF Biological Term Annotations	1.0	null
MYC-20876797-MEDULLOBLASTOMA-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
PMC12238561-42003_2025_8460_MOESM2_ESM.xlsx-IDs_S01_LF_C1_3h-Unnamed_5_LTF	Rummagene Transcription Factor Associations 2026	1.0	null
Thoracic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.712
medial pretectal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.15319
cis-golgi network	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.565092
Heart	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.22076
NB1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
orbital frontal cortex_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.922688
SK-MEL-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
mantle zone of StrSe	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.0839
POLR1B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00625893
PMC3000288__F1	PFOCR Pathway Figure Associations 2023	1.0	null
CSNK1G1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00602891
NCIH716	CCLE Cell Line Gene Expression Profiles	1.0	3.40843
Fallopian tube disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.38
KELLY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.936159
PKD2L1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00509993
MYBL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.79108
empty	GeneRIF Biological Term Annotations	1.0	null
MNDA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00521475
IGROV-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Azoospermia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.547
PMC12224929-ADVS-12-2416784-s006.xlsx-DEG_circGLIS3_KD-Unnamed_6_AR	Rummagene Transcription Factor Associations 2026	1.0	null
RUNX2	ChEA Transcription Factor Targets	1.0	null
IZ in midlateral extrastriate cortex (area 19)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.21455
Kidney renal papillary cell carcinoma_KIRP_TCGA-IA-A40Y-01A-11R-A24Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CLEC17A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00654312
FAM200B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00644
TESK2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00629914
salicyl-alcohol	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.29806
autosomal genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.202618
SLC22A18AS	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00668231
BRD-K32916996	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05426
BRD-K16991828	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.03929
BRD-K90408478	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.62119
account	GeneRIF Biological Term Annotations	1.0	null
SW1783	CCLE Cell Line Gene CNV Profiles	-1.0	-1.82434
LU-165	COSMIC Cell Line Gene Mutation Profiles	1.0	null
carbohydrate metabolism disease	DISEASES Experimental Gene-Disease Association Evidence Scores	1.0	0.052255
GSE65617_0_v_4_aire_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
SUV39H1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00462858
BRD-K78978845	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.60853
VMRCLCP	CCLE Cell Line Gene CNV Profiles	1.0	1.55119
TMEM156	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00532808
BRD-K67896259	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.19438
BRD-K38118226	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.51379
unchanged	GeneRIF Biological Term Annotations	1.0	null
Sandhoff disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.48
superficial stratum of r10BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.4144
L-540	COSMIC Cell Line Gene Mutation Profiles	1.0	null
U2OS	CCLE Cell Line Gene CNV Profiles	-1.0	-1.40235
Abnormality Of Metabolism/Homeostasis	DisGeNET Gene-Phenotype Associations	1.0	null
NCI-H2170	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.908985
Impaired Glucose Tolerance	DisGeNET Gene-Phenotype Associations	1.0	null
anterior (rostral) cingulate (medial prefrontal) cortex_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.33388
Irritable bowel syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.713
lateral part of Med	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.02236
Rigid spine muscular dystrophy 1	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.329
RPMI-8402	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GSE44157,GSE44163_3_v_0_nr6a1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
ITM2C	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00452104
malabsorption	HPO Gene-Disease Associations	1.0	null
APOB	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00545765
hnf1alpha	GeneRIF Biological Term Annotations	1.0	null
plasma membrane region	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.008503
BICR10	DepMap CRISPR Gene Dependency	1.0	3.84026
GIMAP8	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00600164
ACTL6A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00695957
Pancreatic adenocarcinoma_PAAD_TCGA-HZ-7289-01A-11R-2156-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HARA	CCLE Cell Line Gene Expression Profiles	1.0	1.52397
PMC2792912__F6	PFOCR Pathway Figure Associations 2023	1.0	null
BRD-K35196805	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.20643
KYSE-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.90311
LS1034	DepMap CRISPR Gene Dependency	1.0	2.70632
Microcytic anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.087
EFM-19	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.966165
GOLGA5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82395
HS 38.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06415
Ptosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.247
autosomal recessive disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.323365
OVCAR-5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.01091
jejunal epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.625465
ZNF93	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.7929
Metabolic dysfunction-associated steatohepatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.673
GSE211286_1_v_5_tcf12_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
BICR 22	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.61262
Vascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.883
Leukocyte disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.295
Lupus erythematosus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.08
Obstructive Azoospermia	DisGeNET Gene-Disease Associations	1.0	null
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
SI	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00759454
Pancreatic adenocarcinoma_PAAD_TCGA-3A-A9I7-01A-21R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Substance abuse	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.308
PMC7430827-12864_2020_6933_MOESM4_ESM.xlsx-Sheet1-Additional_file_4_Table_S4_A_list_of_3_062_genes_containing_locus_where_only_KD_had_non-synonymous_SNPs_compared_to_other_duck_breeds_AR	Rummagene Transcription Factor Associations 2026	1.0	null
201T	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Long QT syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.104
phenotypic abnormality	HPO Gene-Disease Associations	1.0	null
BRD-K67036882	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.26493
STEEP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.31272
organism form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.02951
AOC3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00525731
Sleep disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.73
SP in rostral perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.30443
Metabolism	Reactome Pathways 2014	1.0	null
BRD-K81418486_vorinostat_HCC515_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Lateral septal nucleus, ventral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.44571
BRD-K11663430_-666_MCF7_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K88936403	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.32148
PMC3597489__F4	PFOCR Pathway Figure Associations 2024	1.0	null
CW2	CCLE Cell Line Gene Expression Profiles	1.0	1.40901
molecular_function	GO Molecular Function Annotations 2015	1.0	null
hsa-miR-576-5p	TargetScan Predicted Conserved microRNA Targets	1.0	1.45615
ABHD8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90799
Medial group of the dorsal thalamus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.34985
SHISA5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00490776
BRD-K51937785	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.21545
Lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.34
FLO-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PMC7266663__F7	PFOCR Pathway Figure Associations 2023	1.0	null
mantle zone of IC	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.19424
PMC8875669__F2	PFOCR Pathway Figure Associations 2024	1.0	null
Respiratory system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.558
intestinal epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.37896
carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.50669
contribute	GeneRIF Biological Term Annotations	1.0	null
other source	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.748753
RARA_KD_GDS4065_42_human_MCF-7	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
Carbuncle	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.303
Toxic encephalopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.42
Duodenal ulcer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.081
BRD-K32272500	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.46774
PMC3317213__F4	PFOCR Pathway Figure Associations 2023	1.0	null
SLC30A4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0061715
abnormality of the intestine	HPO Gene-Disease Associations	1.0	null
CNN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.93656
ESC_J1_UP_LATE.V1	MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations	-1.0	null
CATSPER2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00507734
heterozygosity	GeneRIF Biological Term Annotations	1.0	null
SLC25A4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00334994
alimentary canal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.33517
FBXO22	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00654825
gastrointestinal system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.606543
MARK3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00476417
X-linked dominant disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.472
Sucrase-isomaltase deficiency, congenital	CTD Gene-Disease Associations	1.0	2.88009
COLO 680N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.965083
Allergic contact dermatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.062
PMC7350255__F8	PFOCR Pathway Figure Associations 2024	1.0	null
orbital frontal cortex_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.282
BICR22	COSMIC Cell Line Gene CNV Profiles	1.0	2.06505
BRD-K00078503	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.32474
Fibrosis	CTD Gene-Disease Associations	1.0	1.21076
PMC3444437__F9	PFOCR Pathway Figure Associations 2024	1.0	null
PMC5013308__F5	PFOCR Pathway Figure Associations 2024	1.0	null
medial subdivision of area 10	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-2.32961
PMC4590705-13062_2015_86_MOESM1_ESM.xlsx-Gene_A_-_TP53-Unnamed_4_TP53	Rummagene Transcription Factor Associations 2026	1.0	null
MZ in posterior parahippocampal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.18021
BRD-K33287655	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.25701
superficial stratum of r5Lim	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.05494
NCI-H835	COSMIC Cell Line Gene Mutation Profiles	1.0	null
plasma membrane region	GO Cellular Component Annotations 2015	1.0	null
whole body	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.63456
BRD-K75143842	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.46029
Squamous cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.035
RDH8	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00767401
tissues, cell types and enzyme sources	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.64106
PMC6345743__F5	PFOCR Pathway Figure Associations 2023	1.0	null
ht-29 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.17757
liver	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.484766
PMC4829553__F4	PFOCR Pathway Figure Associations 2024	1.0	null
BRD-K97493608	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.20256
Gastritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.521
Renal glycosuria	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.205
CL40	CCLE Cell Line Gene Expression Profiles	1.0	1.39251
Myositis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.274
BRD-K73635724	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.33845
rare	GeneRIF Biological Term Annotations	1.0	null
DHRS3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00607522
SNU-475	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08877
PMC7035310__F3	PFOCR Pathway Figure Associations 2024	1.0	null
AMY2A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00588294
G130	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.908985
Functional gastric disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.17
KYSE-220	COSMIC Cell Line Gene Mutation Profiles	1.0	null
glucose metabolism disease	DISEASES Experimental Gene-Disease Association Evidence Scores	1.0	0.052255
BRD-K59518944	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.74771
cystic fibrosis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.491215
Pheochromocytoma and Paraganglioma_PCPG_TCGA-WB-A81W-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC6151767__S27	PFOCR Pathway Figure Associations 2023	1.0	null
membrane region	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.130739
bemegride-3051	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
KINGS-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
primary visual cortex (striate cortex, area V1/17)_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.861106
maturity-onset diabetes of the young type 2	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.043
Mucopolysaccharidosis VI	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.645
intestinal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.646165
MKN-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.88677
SORD	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0078531
SSTR4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00408514
POPDC3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.010309
Inherited metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.681
ATG5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00639211
posterior cortical nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.830921
callosal sling	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.877994
GOT1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00498001
PMC7868698__F2	PFOCR Pathway Figure Associations 2024	1.0	null
KYSE270	CCLE Cell Line Gene CNV Profiles	1.0	1.65471
Acquired metabolic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.975
dorsorostral division of MFC (area 32)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.03286
BRD-K62203376	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.03444
gut cavity	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.560449
macromolecular complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.558457
TE6	CCLE Cell Line Gene CNV Profiles	1.0	1.37888
STK31	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0119005
inner SZ in midlateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.35229
spanning component of membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.233101
inferolateral temporal cortex (area TEv, area 20)_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.12522
nucleus of the stria terminalis, medial division, anterior part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.44571
NCI-H630	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-QT-A5XP-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DMS 273	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.965083
Pancreatic cystadenoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.61
orbital frontal cortex_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.32243
Female reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.802
single-multicellular organism process	GO Biological Process Annotations 2015	1.0	null
NCIH1781	CCLE Cell Line Gene Expression Profiles	1.0	1.457
YAP1	ChEA Transcription Factor Targets	1.0	null
TMIGD2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00626741
PMC9942993-pone.0281645.s002.xlsx-AR_as_non-adaptive_as_maint-ENSEMBL_AR	Rummagene Transcription Factor Associations 2026	1.0	null
Nutritional deficiency disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.331
Pancreatic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.521
CEBPB-26923725-CHIP-SEQ-MACROPHAGESS-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
BRD-K99525048	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.66205
FOXA1-27270436-LNCAP-HUMAN-PROSTATE-CARCINOMA	ChEA Transcription Factor Targets 2022	1.0	null
Cholelithiasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.187
PMC9124206-41419_2022_4940_MOESM8_ESM.xlsx-DEG_PACA-CA-geneName_PTF1A	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-K09250647	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.21604
HLCS	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00524164
TMEM88_KD_GSE43805_682_human_hES cells differentiated along the cardiac lineage	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
binding	GO Molecular Function Annotations 2015	1.0	null
amygdaloid complex_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.15777
18927283-Table2b	GeneSigDB Published Gene Signatures	1.0	null
Nephrosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.024
hsa-miR-3163	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
integument	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.84607
basolateral plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.205059
NCI-H187	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CLIC2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00789428
BRD-K78347804	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.33484
AN3-CA	COSMIC Cell Line Gene Mutation Profiles	1.0	null
RNASE6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00689765
organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.345692
Enzyme Inhibition Disorder	DisGeNET Gene-Phenotype Associations	1.0	null
Latent autoimmune diabetes in adults	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.365
SIPA1L3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0062666
BRD-K63668467	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.37081
BRD-K60946512	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.35484
Cystitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.231
AKR1A1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00593738
BRD-K78668110	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.0939
septohypothalamic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.77759
BRD-K73723329	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.28632
lytic vacuole	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.435775
Myoclonic epilepsy of Lafora	Reactome Pathways 2014	1.0	null
amnion	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.136858
JHU011	DepMap CRISPR Gene Dependency	1.0	2.04096
Acarbose	HMDB Metabolites of Enzymes	1.0	null
BRD-K41895714_AS605240_HT29_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Congenital structural myopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.26
Small intestine_CT1_absorptive	HuBMAP ASCT+B Annotations	1.0	null
Ischemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.929
sphingolipidosis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.083583
Cortical Cataract	DisGeNET Gene-Disease Associations	1.0	null
striatal septum	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.03819
PRKCB	Hub Proteins Protein-Protein Interactions	1.0	null
PMC4815041-NIHMS715090-supplement-Supplementary_Table_10.xlsx-CCF_DP_clustering-Hugo_Symbol_PITX1	Rummagene Transcription Factor Associations 2026	1.0	null
lateral part of r8B	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.04005
SK-MG-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
corpus callosum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.09593
MGAT2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0084008
BRD-K40532221	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.41313
PMC9942993-pone.0281645.s002.xlsx-AR-as_non-adaptive-SYMBOL_AR	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-K69073616	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.11099
NCI-H1915	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K49630153_NCGC00183226-01_A549_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NCI-H2810	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23157
digestive gland	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
bronchoalveolar system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.891798
PMC10810548-pone.0289518.s002.xlsx-SOM_w_identifiers-target_gene_GRHL3	Rummagene Transcription Factor Associations 2026	1.0	null
Large intestine cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.833
PMC3294166__F8	PFOCR Pathway Figure Associations 2024	1.0	null
hsa-miR-4461	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
MAC2A	DepMap CRISPR Gene Dependency	1.0	2.22186
core2	GeneRIF Biological Term Annotations	1.0	null
Metabolic acidosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.547
Brain stem infarction	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.028
Gallbladder disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.07
SB-228357	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.13405
BRD-K47794327	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.18741
PCI-30	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K22537050	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.09204
ZR7530	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.62306
PMC4085347__F3	PFOCR Pathway Figure Associations 2023	1.0	null
BRD-K79568363	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.7912
BRD-K30103771	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.23454
Glycogen storage disease V	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.514
Aspartylglucosaminuria	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.323
BRD-K15128331	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.00032
SHCBP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.66041
PMC4222698__F2	PFOCR Pathway Figure Associations 2024	1.0	null
SKN	COSMIC Cell Line Gene Mutation Profiles	1.0	null
periventricular stratum of r4Ve	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.25893
NCI-H661	COSMIC Cell Line Gene Mutation Profiles	1.0	null
mantle zone of AOD	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.12733
primary motor-sensory cortex (samples)_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.08408
BRD-K74148702_curcumin_JHUEM2_6.0_h_48.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
KCTD3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69071
lateral tuberal nuclei	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.05289
Intestinal obstruction	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.635
SW1463	CCLE Cell Line Gene Expression Profiles	1.0	1.90684
autoimmune disease of gastrointestinal tract	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.779841
CTBP1-25329375-LNCAP-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
carbohydrate metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.614356
PMC7826004__F3	PFOCR Pathway Figure Associations 2023	1.0	null
Hemolytic anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.171
B-cell lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.039
PCK2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00688084
PPARD-21283829-MYOFIBROBLAST-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
PMC11903305-41586_2024_8507_MOESM3_ESM.xlsx-Table_S1_MAF-Hugo_Symbol_MAF	Rummagene Transcription Factor Associations 2026	1.0	null
PMC7509150__F5	PFOCR Pathway Figure Associations 2023	1.0	null
Lactose intolerance	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.945
MED23	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00807109
BRD-K87167435	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.24271
fetal membrane	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.082685
DND-41	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Insulin Resistance	CTD Gene-Disease Associations	1.0	1.24275
Wolman disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.008
RC-K8	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Vitamin B12 deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.656
Prostate adenocarcinoma_PRAD_TCGA-EJ-7312-01B-21R-A32O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC4021575__F3	PFOCR Pathway Figure Associations 2024	1.0	null
duodenum	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
Psychotic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.015
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GR-7351-01A-11R-2213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K25646425	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.43053
r3 part of lateral pontine nuclei	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.11086
SCC-15	COSMIC Cell Line Gene Mutation Profiles	1.0	null
TCF12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00653568
SENP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.5584
Heart Failure	DisGeNET Gene-Disease Associations	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-F7-A50I-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
UNC5C	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00707857
OC-314	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Uridine diphosphate glucose	HMDB Metabolites of Enzymes	1.0	null
Centronuclear myopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.261
caco-2/bbe cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.782725
Cardiomyopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.1
GCT	COSMIC Cell Line Gene Mutation Profiles	1.0	null
caco-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.28378
gastroenteritis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.587054
mineral metabolism disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.079208
Pancreas disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.334
ATP5F1C	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00472606
SCC-3	COSMIC Cell Line Gene Mutation Profiles	1.0	null
membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
RBM18	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60138
KANK1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.006133
GSE131377_1_v_0_spocd1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
KAT5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00564135
nectary	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.188615
Esophageal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.074
Leprosy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.208
lateral septal nucleus, intermedio-dorsal part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.46121
BRD-K12343830	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.19962
Retinal vascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.303
small intestine epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.858837
Perturb_3797_KO_BRG1_SRP165661	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-20.0
PMC12238561-42003_2025_8460_MOESM2_ESM.xlsx-IDs_S23_LF_C1_24h-Unnamed_5_LTF	Rummagene Transcription Factor Associations 2026	1.0	null
protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.53906
embryonic structure	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.603697
Uterine Carcinosarcoma_UCS_TCGA-N5-A59E-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K73075421	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.15049
Head and Neck squamous cell carcinoma_HNSC_TCGA-BA-4075-01A-01R-1436-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HCC2998	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CRTAM	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00558099
CYB5D1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00974021
MAP3K20	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.35766
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2901
PMC12048643-44318_2025_409_MOESM3_ESM.xlsx-regulonTargets-HNF4A_HNF4A	Rummagene Transcription Factor Associations 2026	1.0	null
KE-37	COSMIC Cell Line Gene Mutation Profiles	1.0	null
acquired metabolic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.617877
Brain Lower Grade Glioma_LGG_TCGA-FG-5963-01A-11R-1708-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cytoplasmic part	LOCATE Predicted Protein Localization Annotations	1.0	null
BRD-K74056311	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.40523
LPCAT1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00612763
Gastrointestinal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.768
BRD-A22502289	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.14062
PRKCB	KEA Substrates of Kinases	1.0	null
PDE1A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00474305
U-87-MG	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCIH508	CCLE Cell Line Gene Expression Profiles	1.0	2.00433
rectal cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.053
nucleus	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.270068
PMC7826004__F3	PFOCR Pathway Figure Associations 2024	1.0	null
BRD-K93486666	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.07155
Kidney disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.721
mantle zone of PalSe	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.22058
gastroesophageal reflux disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.231102
membrane-bounded organelle	GO Cellular Component Annotations 2015	1.0	null
BRD-K44834268	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.64039
Diarrhea	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.79
BRD-K25187028	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.18475
Perturb_3833_KO_Satb2_SRP307575	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	20.0
Autosomal genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.519
ZFP91	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.64534
BRD-K49676673	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.0563
Electroclinical syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.333
KIF21A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.18678
BRD-K32974773	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.31807
ETV5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.05633
Becker Muscular Dystrophy	DisGeNET Gene-Disease Associations	1.0	null
CBX6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0043272
BRD-K04272258	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.61287
BRD-K15160749	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.15432
pyramidal layer of taenia tecta	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.05044
MDST8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2219
PMC6151767__F27	PFOCR Pathway Figure Associations 2024	1.0	null
Opportunistic mycosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.149
SCIMP	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00540745
intestinal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.67805
SCN9A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00616373
Fungal infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.28
whole plant	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.06313
smallintestine	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	2.09859
Congenital myopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.363
TE-9	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Aspirin	CTD Gene-Chemical Interactions	1.0	null
Intercalated nucleus of amygdala	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.19777
BRD-K04853698_LDN-193189_HS578T_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K41389177	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.16846
SNU16	CCLE Cell Line Gene Expression Profiles	1.0	1.37328
large intestine	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.87908
Colonic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.767
JMSU1	CCLE Cell Line Gene CNV Profiles	1.0	1.61048
TPR	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00393678
Vulvovaginal candidiasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.051
posterior (caudal) superior temporal cortex (area 22c)_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.05405
GLYCTK	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0077171
PMC11161988-12906_2024_4523_MOESM3_ESM.pdf-32-PA2G4_PA2G4	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-K94962942	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.62024
SHH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.52199
TE-6	COSMIC Cell Line Gene CNV Profiles	1.0	2.06505
pancreas disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.112141
SNU16	DepMap CRISPR Gene Dependency	1.0	2.34761
Brain Lower Grade Glioma_LGG_TCGA-DU-5851-01A-13R-1896-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
apical plasma membrane	GO Cellular Component Annotations 2015	1.0	null
SP in caudal hippocampal proper	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.878367
periventricular stratum of PO1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.00436
extracellular vesicular exosome	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
PMC5749411__F5	PFOCR Pathway Figure Associations 2023	1.0	null
Female reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.391
BRD-K73227372	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.42541
BRD-A89067742_HTS 10765_A549_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.06
NKX3-1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00820432
T-T	COSMIC Cell Line Gene Mutation Profiles	1.0	null
intermolecular	GeneRIF Biological Term Annotations	1.0	null
Weight Loss	CTD Gene-Disease Associations	1.0	1.15526
endocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.604904
SF295	CCLE Cell Line Gene Expression Profiles	-1.0	-2.41322
Glucose metabolism disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.646
Heart valve disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.403
Fucosidosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.264
Kidney renal papillary cell carcinoma_KIRP_TCGA-A4-7915-01A-11R-2204-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H1105	COSMIC Cell Line Gene Mutation Profiles	1.0	null
external globus pallidum	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.00986
NB1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35345
well	GeneRIF Biological Term Annotations	1.0	null
TDRD12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00797654
urinary system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.369373
PMC11511846-42003_2024_7078_MOESM3_ESM.xlsx-ST18-Unnamed_19_ST18	Rummagene Transcription Factor Associations 2026	1.0	null
MED1_OE_GDS4846_11_human_LNCaP prostate cancer cell	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
BRD-K73125678	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.37129
sucrose catabolic process	GO Biological Process Annotations 2023	1.0	null
Systemic mycosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.148
COIL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.22744
RPMI-8866	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Prostatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.044
Biliary tract disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.261
Diabetic polyneuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.343
OVCAR-8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-3.64461
CD248	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00563253
Cervix - Ectocervix	GTEx Tissue Gene Expression Profiles 2023	1.0	7.19797
KARPAS-422	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Crohn's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.404
OCIM1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.53407
HT115	CCLE Cell Line Gene Expression Profiles	1.0	1.57856
colorectal adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.0744
BRD-K58323923	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.02147
abducens motor nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.37572
larabinose	GeneRIF Biological Term Annotations	1.0	null
Lactic acidosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.416
BRD-K63462027	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.2369
agranular insular cortex (area Iag)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.835045
HNF1B_OE_GDS1499_253_human_HEK293 embryonic kidney cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
hsa-miR-3653	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
PMC5418358__F2	PFOCR Pathway Figure Associations 2023	1.0	null
Arteriosclerosis obliterans	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.192
CSPG4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.83569
benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.253831
sucrose degradation	HumanCyc Pathways	1.0	null
iec-6 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.09606
HCC1569	CCLE Cell Line Gene Expression Profiles	-1.0	-1.54902
BRD-K50140147_NVP-TAE684_A549_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
cos-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.328628
Gastrointestinal system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.03
RDES	CCLE Cell Line Gene CNV Profiles	-1.0	-1.47257
FOXL1	JASPAR Predicted Transcription Factor Targets	1.0	null
SLC12A4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00566767
Type 1 diabetes mellitus_T lymphocyte_GSE10586	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.59408
HCC-78	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PMC10645393-jci-133-169200-s102.xlsx-Table_S14_AR-V_DNA-PK_DEGs-Unnamed_4_AR	Rummagene Transcription Factor Associations 2026	1.0	null
glucosidase activity	GO Molecular Function Annotations 2015	1.0	null
Lateral septal complex	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.30248
BRD-K52989901	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.80465
Progressive myoclonus epilepsy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.624
membrane part	GO Cellular Component Annotations 2015	1.0	null
Glycogen metabolism disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.39
BRD-K30214140	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.46679
MEWO	CCLE Cell Line Gene CNV Profiles	1.0	2.07307
AR-21915096-LNCAP-1F5-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Irritable Bowel Syndrome	DisGeNET Gene-Disease Associations	1.0	null
RUNX2-22187159-PCA-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
TRIM27	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00532659
hydrolase activity, acting on glycosyl bonds	GO Molecular Function Annotations 2015	1.0	null
BT20	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.741581
LGALS16	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00444413
GSE142019,GSE142021_1_v_3_ythdf2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Mineral metabolism disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.204
Neuromuscular junction disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.04
DMS 53	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.867026
BRD-K78856515	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.2733
Autosomal genetic disease	DISEASES Curated Gene-Disease Association Evidence Scores 2025	1.0	5.0
TE14	CCLE Cell Line Gene CNV Profiles	1.0	2.42265
SPDEF	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00637705
Aortic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.087
BRD-K33734659	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.87931
ABC1	CCLE Cell Line Gene Expression Profiles	-1.0	-2.14955
alpha-1,4-glucosidase activity	GO Molecular Function Annotations 2023	1.0	null
ARNT-22903824-MCF7-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
PFKFB3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00738869
ACHN	BioGPS Cell Line Gene Expression Profiles	-1.0	-0.899423
primary somatosensory cortex (area S1, areas 3,1,2)_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.936276
PMC8208619__F6	PFOCR Pathway Figure Associations 2024	1.0	null
catalytic complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.051463
Scoliosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.301
Congenital Bilateral Aplasia Of Vas Deferens	DisGeNET Gene-Disease Associations	1.0	null
BRD-K45472595	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.24062
BRD-K91577886	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.38363
KDM3A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0058192
PMC3489928__F4	PFOCR Pathway Figure Associations 2024	1.0	null
BRD-K16621460	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.78182
Vulvovaginitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.074
ES5	COSMIC Cell Line Gene Mutation Profiles	1.0	null
primary motor cortex (area M1, area 4)_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.25575
SNU503	CCLE Cell Line Gene CNV Profiles	1.0	1.37803
hippocampus (hippocampal formation)_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.928076
PMC4021575__F3	PFOCR Pathway Figure Associations 2023	1.0	null
19351846-SuppTable2	GeneSigDB Published Gene Signatures	1.0	null
BRD-K84073439	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.23456
TGW	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Lysosomal storage disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.705
Glucose	MW Enzyme Metabolite Associations	1.0	null
RUNX2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00651246
COLO-668	COSMIC Cell Line Gene Mutation Profiles	1.0	null
periventricular stratum of r5Tr	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.26965
alimentary canal	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
CTBP2-25329375-LNCAP-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
GSE147210_2_v_5_kmt2d_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Brain ischemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.619
PMC3087601__F1	PFOCR Pathway Figure Associations 2024	1.0	null
BRD-K71625503	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.4141
KCND3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00692186
RPMI 8226	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.671
SNU-1040	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Isolated elevated serum creatine phosphokinase levels	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.319
P2RY4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00583951
CAL120	DepMap CRISPR Gene Dependency	1.0	4.29986
Hepatocellular carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.624
BRD-K30674442	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.02969
Hemoglobinopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.192
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A51R-06A-11R-A266-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SLC39A14	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00746997
result	GeneRIF Biological Term Annotations	1.0	null
Breast Neoplasms	CTD Gene-Disease Associations	1.0	1.1908
Globus pallidus, external segment	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.08869
Primary Adenocarcinoma Of Lower Third Of Esophagus Due To Barrett Esophagus	DisGeNET Gene-Disease Associations	1.0	null
Atrial Fibrillation New Onset	DisGeNET Gene-Disease Associations	1.0	null
PMC7772402__F1	PFOCR Pathway Figure Associations 2023	1.0	null
PMC8573099__F6	PFOCR Pathway Figure Associations 2024	1.0	null
MKN7	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21048
intracellular part	LOCATE Predicted Protein Localization Annotations	1.0	null
Acrokeratoelastoidosis Of Costa	DisGeNET Gene-Disease Associations	1.0	null
PMC6206292__F3	PFOCR Pathway Figure Associations 2023	1.0	null
small molecule metabolic process	GO Biological Process Annotations 2015	1.0	null
SP140	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00516116
GSE149264,GSE149267_9_v_1_trp53_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
PMC7868698__F2	PFOCR Pathway Figure Associations 2023	1.0	null
periventricular stratum of m2AD	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.42038
SNCA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00749024
CAL-85-1	COSMIC Cell Line Gene CNV Profiles	1.0	2.06505
BRD-K28932860	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.8584
PMC8106838__F1	PFOCR Pathway Figure Associations 2024	1.0	null
FCGR1BP	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00441939
extracellular	GeneRIF Biological Term Annotations	1.0	null
FU97	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02732
MC-CAR	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GSE140200_1_v_0_trim59_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE215351,GSE215794_1_v_3_kdm8_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Brain infarction	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.617
PMC9327801__F9	PFOCR Pathway Figure Associations 2024	1.0	null
BRD-A10662413_Prenylamine lactate_PC3_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
LN-18	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Balanoposthitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.203
BRD-K66419338	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.51999
BRD-K50836978_Purvalanol A_HCC515_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Glycogen storage disease VI	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.241
Congenital sucrase-isomaltase deficiency	DISEASES Curated Gene-Disease Association Evidence Scores 2025	1.0	5.0
Epididymis disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.323
prostate	GTEx Tissue Gene Expression Profiles	1.0	0.924942
Thoracic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.696
SCN3A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00671609
mesoderm	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.396465
BRD-K69932463_AZD-8055_SKBR3_3_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
PMC8582123-13073_2021_996_MOESM3_ESM.xlsx-PITX1-HIT_PITX1	Rummagene Transcription Factor Associations 2026	1.0	null
SIRPG	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00672364
dorsal thalamus_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.34994
XCL2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00747631
plasma membrane region	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.133756
intracellular	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.887981
SOX2-18692474-MESCS-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
HNF1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.99249
orbital frontal cortex_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.936554
Multiple Polyps	DisGeNET Gene-Disease Associations	1.0	null
PMC10661700-41525_2023_383_MOESM2_ESM.xlsx-Supp_Table5_gnomAD_SAS_GCR-SYMBOL_NR3C1	Rummagene Transcription Factor Associations 2026	1.0	null
PHACTR2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0054871
Hematopoietic system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.945
liver cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.06611
NR1I3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00569224
CXCL9	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00516037
KSR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00725239
DAN-G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04272
PCI-30	COSMIC Cell Line Gene CNV Profiles	1.0	2.06505
BRD-K29458283_Chlorambucil_MCF7_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
AHR-22903824-MCF-7-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
CD74	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00729842
OVCA 432	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.671
Liver cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.782
Diseases of metabolism	Reactome Pathways 2024	1.0	null
Genetic disease	DISEASES Curated Gene-Disease Association Evidence Scores 2025	1.0	5.0
MFE-280	COSMIC Cell Line Gene CNV Profiles	1.0	2.06505
STAT3_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Pancreatic Neoplasms	CTD Gene-Disease Associations	1.0	1.08762
NCI-H2126	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K88313926	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.37715
BRD-K54285478	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.11427
KYSE-270	COSMIC Cell Line Gene Mutation Profiles	1.0	null
dorsal preisthmic part of periaqueductal gray	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.42038
Fructose	MW Enzyme Metabolite Associations	1.0	null
HCC1897	CCLE Cell Line Gene CNV Profiles	1.0	1.55999
membrane region	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.006199
OXTR	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00697189
CP in retrosplenial cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.962303
PNPT1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00560158
animal	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
Immune system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.327
disaccharide catabolic process	GO Biological Process Annotations 2023	1.0	null
BRD-K56470219	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.48464
primary auditory cortex (core)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.02023
SSU72	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8657
amygdaloid complex_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.58113
catalytic activity	GO Molecular Function Annotations 2015	1.0	null
Breast carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.155
X-linked recessive disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.733
subparafascicular nucleus of thalamus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.44092
GABPA_01_190	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	9.97164
BRD-K21180458	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.2013
Hepatitis B	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.364
STREPTOZOCIN	DGIdb Drug Targets 2026	1.0	0.287674
BRD-K71073890	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.21601
X-linked myopathy with excessive autophagy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.552
BRD-K55018894	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.04051
Kidney renal papillary cell carcinoma_KIRP_TCGA-A4-7584-01A-11R-2139-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Essential hypertension	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.053
immune system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.235616
Medial amygdalar nucleus, anterodorsal part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.02236
Auditory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.05
BRD-K49208610	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.42878
Male reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.423
NCI-SNU-16	GDSC Cell Line Gene Expression Profiles	1.0	1.66857
disease of anatomical entity	GWASdb SNP-Disease Associations	1.0	0.030356
JVM3	CCLE Cell Line Gene CNV Profiles	1.0	1.88502
Urolithiasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.001
ZNF217-24962896-MCF7-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
non-langerhans-cell histiocytosis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.169812
BRD-K44298652	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.30649
MUC20	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00521868
cerebellar cortex_23 yrs_M_12300	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.950461
CXXC5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.33635
UACC-62	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SLAMF1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00546663
BRD-K49391713	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.26487
Atherosclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.344
Perturb_9608_KO_Sirt7_SRP223932	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-5.56626
SEMA4C	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00677711
BRD-K71672234	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.00866
cellular_component	GO Cellular Component Annotations 2015	1.0	null
Intestinal saccharidase deficiencies	Reactome Pathways 2024	1.0	null
PPARD-21283829-MYOFIBROBLAST-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Proteinuria	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.709
stomach disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.220424
hsa-miR-372	TargetScan Predicted Conserved microRNA Targets	1.0	1.11641
Pheochromocytoma and Paraganglioma_PCPG_TCGA-WB-A81J-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
elicits	GeneRIF Biological Term Annotations	1.0	null
STAG2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0140533
GSE148692,GSE148695_7_v_0_satb2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
IL13RA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36743
hydrolase activity	GO Molecular Function Annotations 2015	1.0	null
TE10	CCLE Cell Line Gene Expression Profiles	-1.0	-1.68344
PRKACA	Hub Proteins Protein-Protein Interactions	1.0	null
Sebaceous gland disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.134
gastrointestinal tract	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
SLC22A4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00616559
mRNA_GATA3_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
RELA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00383621
pyramidal layer of caudal subiculum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.22279
MFSD2A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00497855
PMC7816290__F7	PFOCR Pathway Figure Associations 2024	1.0	null
RCC10RGB	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GRM2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00531274
mody	GeneRIF Biological Term Annotations	1.0	null
Intestinal infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.192
SAMD4B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.59913
PIK3CA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00863611
Thyroid cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.152
JHH5	CCLE Cell Line Gene CNV Profiles	1.0	1.85453
Specific developmental disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.566
Adrenoleukodystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.08
RB_P107_DN.V1	MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations	1.0	null
C75	DepMap CRISPR Gene Dependency	1.0	3.22534
vitelline membrane	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.945656
NCIH1993	DepMap CRISPR Gene Dependency	1.0	4.95566
Edema	CTD Gene-Disease Associations	1.0	1.23233
medioventral part of putamen	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.29919
membrane part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.36088
mRNA_SOX2_17515932	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
PMC2820080__F4	PFOCR Pathway Figure Associations 2024	1.0	null
Adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.485
superficial stratum of AOD	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.12779
root	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.064849
Postgastrectomy syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.238
indusium griseum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.936099
Integumentary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.036
Depressive disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.998
caudal ganglionic eminence_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.21721
GSTM1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00754697
BRD-K81706364	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.00118
SHMT1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0100769
BRD-K35945596	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01354
BRD-K98938484	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.31532
PMC9468207__F6	PFOCR Pathway Figure Associations 2024	1.0	null
MDAMB453	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.41493
inferolateral temporal cortex (area TEv, area 20)_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.66499
whole body	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
posterior (caudal) superior temporal cortex (area 22c)_19 pcw_F_12885	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.40825
Pheochromocytoma and Paraganglioma_PCPG_TCGA-WB-A820-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC9942993-pone.0281645.s002.xlsx-AR_as_all_as_maintained-ENSEMBL_AR	Rummagene Transcription Factor Associations 2026	1.0	null
Coronavirus infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.732
BRD-K71799778_BML-259_SW620_6.0_h_80.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GSE133691_2_v_0_lgr5_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
glycogen metabolism disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.353763
BFTC-905	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.96781
16289389-TableS1	GeneSigDB Published Gene Signatures	1.0	null
Monogenic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.556
BICR22	CCLE Cell Line Gene CNV Profiles	1.0	1.89432
gastrointestinal cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.78522
cell projection part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.50622
LYL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.29617
MBD4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00520817
IFNA14	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00429442
LASP1NB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.80581
Acute pancreatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.678
pancreas	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
BRD-K05277255	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.03892
GMPPB	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00653645
NKM-1	GDSC Cell Line Gene Expression Profiles	1.0	1.43483
trophozoite	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.214954
BRD-K63401195	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.38977
mantle zone of m1AD	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.77759
Obesity	DisGeNET Gene-Disease Associations	1.0	null
dyspepsia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.307033
H3255	COSMIC Cell Line Gene Mutation Profiles	1.0	null
intermediate stratum of r1Lim	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.18348
GJC2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00568969
PMC9133251__F6	PFOCR Pathway Figure Associations 2024	1.0	null
GNA12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00553138
VPS4A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0038198
HCC2998	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.06868
K562	BioGPS Cell Line Gene Expression Profiles	1.0	1.12869
Stomach disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.788
PMC6277783__F2	PFOCR Pathway Figure Associations 2023	1.0	null
BRD-K29652917	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.00127
GSE189653,GSE203344_5_v_3_fluoxetine_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
ENTPD3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00627362
Tuberculosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.542
acquired metabolic disease	DISEASES Experimental Gene-Disease Association Evidence Scores	1.0	0.052255
Digestion	Reactome Pathways 2024	1.0	null
orbital frontal cortex_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.80461
Intestinal Metaplasia	DisGeNET Gene-Phenotype Associations	1.0	null
FCRL6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00436335
periventricular stratum of r5Ve	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.08869
colon carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.841344
Prostate adenocarcinoma_PRAD_TCGA-G9-6366-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Congenital disorder of glycosylation type IIa	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.076
Distal myopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.095
PMC5268776__F12	PFOCR Pathway Figure Associations 2024	1.0	null
PMC5941175__F4	PFOCR Pathway Figure Associations 2024	1.0	null
Chronic Lymphocytic Leukemia	DisGeNET Gene-Disease Associations	1.0	null
posterior part of Int	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.06073
BRD-K71138333	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.31749
RBMS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.10183
hyperglycemia	GeneRIF Biological Term Annotations	1.0	null
hydroxytoluic-acid	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.99134
Head and Neck squamous cell carcinoma_HNSC_TCGA-TN-A7HI-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Organ system benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.486
Kidney Diseases	CTD Gene-Disease Associations	1.0	1.35676
ESR2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65575
r7 part of the nucleus of Roller	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.0594
Perturb_9602_KO_Eed_SRP328167	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-20.0
PMC10645393-jci-133-169200-s102.xlsx-Table_S14_AR-V_DNA-PK_DEGs-Supplementary_Table_14_Overlapping_DEG_list_from_CWR22Rv1-AR-EK_cells_depleted_of_AR-V7_and_treated_with_DNA-PK_inhibitor_NU5455_AR	Rummagene Transcription Factor Associations 2026	1.0	null
NOMO-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SOAT1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00591626
cell part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
Uterine Carcinosarcoma_UCS_TCGA-N8-A56S-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lower respiratory tract disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.299
Arteriosclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.384
adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.70147
BRD-K09635314_-666_NCIH1694_6.0_h_80.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
esophageal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.769441
GSE164494_1_v_2_angiotensin ii_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
CAPAN-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16466
MMP20	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0043891
HS746T	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Insulinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.617
LP-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.844336
golgi apparatus	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
SERPINI1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00621566
BRD-K37269981	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.13888
participates	GeneRIF Biological Term Annotations	1.0	null
Nucleus of the brachium of the inferior colliculus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.06876
layer 1 of AOD cortex	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.55736
lysosomal storage disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.052998
colonocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.71009
IFNL3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00475007
Tremor	DisGeNET Gene-Phenotype Associations	1.0	null
organic substance metabolic process	GO Biological Process Annotations 2015	1.0	null
Prediabetes syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.856
CACNB2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00604264
amino acid metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.087712
PMC5013308__F5	PFOCR Pathway Figure Associations 2023	1.0	null
urinary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.044071
Hypertrophic cardiomyopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.297
POLR2A	ENCODE Transcription Factor Targets	1.0	null
KNS-62	COSMIC Cell Line Gene CNV Profiles	1.0	2.06505
Diabetes	DisGeNET Gene-Disease Associations	1.0	null
skeletal system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052074
anterior (rostral) cingulate (medial prefrontal) cortex_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.876284
PTP4A3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00772884
folding	GeneRIF Biological Term Annotations	1.0	null
Gastroparesis	DisGeNET Gene-Disease Associations	1.0	null
PMC12619835-41467_2025_66007_MOESM13_ESM.xlsx-Sheet1-T3M4_KLF5_activated_H3K27ac_KLF5	Rummagene Transcription Factor Associations 2026	1.0	null
diagonal part of septum	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.03831
esophagus adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.831099
Motor neuron disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.345
BRD-K15343038	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.05502
PMC2576041__F9	PFOCR Pathway Figure Associations 2024	1.0	null
extracellular membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
CHL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.844336
isthmic portion of paranigral nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.40762
CKM	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00819502
extracellular organelle	GO Cellular Component Annotations 2015	1.0	null
Multiple sclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.238
integral component of membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
IGR-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
outer CP in subgenual (subcallosal) cingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.29401
Bone remodeling disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.83
H3K27me3_cardiac mesoderm_hg19_8	ENCODE Transcription Factor Binding Site Profiles	1.0	null
periventricular stratum of SeDg	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.22058
inherited metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.452585
BRD-K92712671	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.18776
brain	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
Brain disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.526
SREBF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8847
PMC7917105__F4	PFOCR Pathway Figure Associations 2024	1.0	null
superficial stratum of r2Lim	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.20686
MRK-NU-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K63024248	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.18978
PMC5352183-oncotarget-08-624-s009.xlsx-Table_S20-1_indicates_that_the_gene_is_both_a_TP53-MW_and_a_TP53-MSN_gene_in_the_correponding_cancer_and_0_indicates_not_TP53	Rummagene Transcription Factor Associations 2026	1.0	null
CPSF7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95285
PMC7702050__F2	PFOCR Pathway Figure Associations 2023	1.0	null
GMNN	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00486789
heart	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	0.8813
PMC4051124-1471-2164-15-256-S11.XLSX-WES_MSMD-STAT1-Target_STAT1	Rummagene Transcription Factor Associations 2026	1.0	null
integral component of membrane	GO Cellular Component Annotations 2015	1.0	null
CA46	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ADGRE5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00549124
BRD-K13781734	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.2347
abnormality of metabolism/homeostasis	HPO Gene-Disease Associations	1.0	null
Adrenal gland disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.09
Tay-Sachs disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.467
OVKATE	CCLE Cell Line Gene CNV Profiles	1.0	1.37379
BRD-K19085288	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.0277
Pancreatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.07
CAMSAP2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00420154
orbital frontal cortex_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.882326
Mediodorsal nucleus of the thalamus, lateral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.10959
SMCO4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00715282
BRD-K53199675	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.2198
hypersensitivity reaction type ii disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.306672
inner SZ in ventromedial extrastriate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.0437
amygdaloid complex_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.2372
BPH-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
r7 portion of ambiguous motor nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.10412
temporal muscle trigeminal motor cell group	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.38947
dorsolateral prefrontal cortex_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.01879
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
HCC60	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.83181
PTGS1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0063875
Pheochromocytoma and Paraganglioma_PCPG_TCGA-P7-A5NX-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NFATC4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00512954
PMC5016207__F2	PFOCR Pathway Figure Associations 2024	1.0	null
Intestinal volvulus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.276
leaf base	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.438739
EOMES_OE_GDS5077_65_human_RUES2	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
PMC9900921__F7	PFOCR Pathway Figure Associations 2024	1.0	null
Collecting Duct Carcinoma Of The Kidney	DisGeNET Gene-Disease Associations	1.0	null
WDR62	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.74021
CDCA5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50633
mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.94515
Digestion of dietary carbohydrate	Reactome Pathways 2024	1.0	null
BRD-K90313630	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.23287
znf148_21828133_erythroblast_lof_human_gpl571_gse31092	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.006706
BRD-K98095706	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.08664
HDGFL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.30705
RRM2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8246
intestine	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
Multiple Chronic Conditions	DisGeNET Gene-Disease Associations	1.0	null
Perturb_8451_KD_EphA2_SRP237314	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	7.87506
OVCAR4	CCLE Cell Line Gene CNV Profiles	1.0	1.63389
SORL1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00484265
cell	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.33467
LB1047-RCC	GDSC Cell Line Gene Expression Profiles	-1.0	-1.44672
multi-organism process	GO Biological Process Annotations 2015	1.0	null
out	GeneRIF Biological Term Annotations	1.0	null
CADOES1	CCLE Cell Line Gene CNV Profiles	1.0	1.67157
Pheochromocytoma and Paraganglioma_PCPG_TCGA-SQ-A6I4-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DG-75	COSMIC Cell Line Gene Mutation Profiles	1.0	null
cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.635135
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-4740-01A-01R-1436-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
primary auditory cortex (core)_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.970873
BRD-K75243062	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.12012
Angiokeratoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.132
MYO1C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.85119
SOX9_01_308	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	2.07192
m2 part of paranigral nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.26073
Spinal nucleus of the trigeminal, oral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.53528
UACC-62	GDSC Cell Line Gene Expression Profiles	-1.0	-1.98675
POLR3K	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00366832
mediodorsal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.12363
jejunum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.13151
PMC4590705-13062_2015_86_MOESM1_ESM.xlsx-Gene_A_-_TP53-Unnamed_8_TP53	Rummagene Transcription Factor Associations 2026	1.0	null
layer 3 of LOT	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.67305
Mucopolysaccharidosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.346
PMC4775314__F3	PFOCR Pathway Figure Associations 2023	1.0	null
BRD-K91593159	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.54979
primary visual cortex (striate cortex, area V1/17)_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.862969
alimentary canal	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
GSE201042_6_v_0_ptpmt1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
ZIC4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.73269
Polyneuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.484
SK-MEL-5	COSMIC Cell Line Gene Mutation Profiles	1.0	null
celecoxib_homo sapiens_gpl8300_gds3384	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Prostate adenocarcinoma_PRAD_TCGA-G9-6384-01A-11R-1789-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Musculoskeletal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.514
outer CP in rostral perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.22368
BST2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00492406
rostral part of entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.870497
ZFHX3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00735922
inflorescence	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.063179
BRD-K42650945	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.31843
hsa-miR-607	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
hsa-miR-4263	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
hippocampus (hippocampal formation)_16 pcw_M_12879	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.282
BICRAL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.27205
MDAMB175VII	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.753831
Massive Osteolyses	DisGeNET Gene-Disease Associations	1.0	null
stratum pyramidale of rostral CA2	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.06688
zuclopenthixol-4261	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
U-2932	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.06234
Orbital area, ventrolateral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.03384
Diabetic retinopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.33
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-4726-01A-01R-1436-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PARK7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00639557
GSE63048_11_v_12_morc1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
calcium metabolism disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.118428
niemann-pick disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.232489
IL5RA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0059842
Prostate adenocarcinoma_PRAD_TCGA-YL-A8SH-01B-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Weight Gain	CTD Gene-Disease Associations	1.0	1.03678
urogenital system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.23362
Perturb_15370_KD_TP53_SRP294453	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-20.0
Dental caries	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.236
H2AFZ_CD14-positive monocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SuperiorCervicalGanglion	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.22922
BRD-K78395012	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.2934
periaqueductal gray substance, dorsolateral portion	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.10094
GP2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00738376
cytoplasmic membrane-bounded vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.159658
Prostate adenocarcinoma_PRAD_TCGA-HC-7210-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KPL-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07672
PMC9433211__F2	PFOCR Pathway Figure Associations 2024	1.0	null
congenital	GeneRIF Biological Term Annotations	1.0	null
SALL4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.85981
membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
microtubule	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.186397
cell projection	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.86624
fidelity	GeneRIF Biological Term Annotations	1.0	null
PMC8040901__F2	PFOCR Pathway Figure Associations 2024	1.0	null
BRD-K45245001	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.17806
rough endoplasmic reticulum	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.304771
HCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26638
BRD-K99749624_linifanib_HA1E_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
extracellular region part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.045059
BRD-K16044155	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.01835
ICAM2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00442558
PMC8709197__F7	PFOCR Pathway Figure Associations 2024	1.0	null
paneth cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.14963
NCI-H1568	COSMIC Cell Line Gene Mutation Profiles	1.0	null
LIPC	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00756012
TGBC24TKB	GDSC Cell Line Gene Expression Profiles	1.0	2.12196
Giardiasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.442
r4 part of parvocellular medial vestibular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.26965
Glycoproteinosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.082
PMC8636667__F1	PFOCR Pathway Figure Associations 2024	1.0	null
PMC7509150__F5	PFOCR Pathway Figure Associations 2024	1.0	null
Spinal muscular atrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.11
BRD-K64788035	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.18393
Perturb_16526_KO_Ahrr_SRP318414	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	2.7233
common	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-512-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
small intestine	HPA Tissue Gene Expression Profiles	1.0	1.43323
Gastroenteritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.418
Mucopolysaccharidosis III	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.862
Hepatobiliary system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.782
CDCA7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00715701
BCPAP	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HOP-92	GDSC Cell Line Gene Expression Profiles	-1.0	-2.18577
PMC3317213__F4	PFOCR Pathway Figure Associations 2024	1.0	null
STAT3	ChEA Transcription Factor Targets	1.0	null
Vaginitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.043
BRD-K69443135	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.23092
BRD-K77709215	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.22574
sucrase-isomaltase deficiency, congenital	OMIM Gene-Disease Associations	1.0	null
BRD-K21620541	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.15996
NBN	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00584807
KARPAS-45	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Peptic Ulcer	DisGeNET Gene-Disease Associations	1.0	null
Ulcerative colitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.476
GSE190534,GSE190536_0_v_3_cyclophosphamide_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
PPP1R14B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00775633
PMC10957566__F2	PFOCR Pathway Figure Associations 2024	1.0	null
S1PR5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00681564
BRD-K58270905	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.00897
ventrolateral prefrontal cortex_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.940083
PE/CA-PJ15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02732
Metachromatic leukodystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.61
PPP1R15A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0061366
Triangular nucleus of septum	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.03249
AKR1C4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00555735
PMC7305081-10120_2020_1045_MOESM1_ESM.xlsx-Tab2-Mutation-MAF_MAF	Rummagene Transcription Factor Associations 2026	1.0	null
cell projection membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	2.11294
MDA MB435	BioGPS Cell Line Gene Expression Profiles	1.0	1.30485
ACKR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.31968
polysaccharide digestion	GO Biological Process Annotations 2015	1.0	null
Metabolism of carbohydrates	Reactome Pathways 2014	1.0	null
intermediate pretectal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.09543
digestive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.694537
PRDM14-20953172-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Glucose intolerance	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.244
Wolff-Parkinson-White syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.261
Parasitic infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.782
cuboid bone	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.331194
Chronic obstructive pulmonary disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.814
KYSE180	CCLE Cell Line Gene CNV Profiles	1.0	1.3947
cell periphery	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
SFRP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00506633
maturity-onset diabetes of the young	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.546
HCC202	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Hepatic Cirrhosis_Liver_GSE6764	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-1.69712
Contact dermatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.169
NCI-H146	COSMIC Cell Line Gene Mutation Profiles	1.0	null
KCNIP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.29427
BRD-K56001384_A8674_MCF7_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TE-15	COSMIC Cell Line Gene Mutation Profiles	1.0	null
D-245MG	COSMIC Cell Line Gene Mutation Profiles	1.0	null
gut mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.568025
PMC5961061__F1	PFOCR Pathway Figure Associations 2024	1.0	null
TM6SF1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00706305
SIHA	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Short bowel syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.585
HT-1197	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K63134971	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.07778
Medial amygdalar nucleus, anteroventral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.50651
CRAT	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00562181
intracellular organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
LUC7L2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.39472
retina	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.46784
BRD-K32223081	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.2259
Perturb_9258_KO_Mr1_ERP107271	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	2.99164
A172	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.33903
Migraine	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.171
Demyelinating disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.248
Background diabetic retinopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.093
intracellular organelle	GO Cellular Component Annotations 2015	1.0	null
BRD-K74148702_curcumin_HT29_24.0_h_48.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-CH-5744-01A-11R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PDLIM1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00397849
GSE77795_0_v_3_pparg_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
MEF2A	JASPAR Predicted Transcription Factor Targets	1.0	null
hippocampus (hippocampal formation)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.826363
HSP90B1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00623006
Bone disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.213
doxorubicin_homo sapiens_gpl550_gds846	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
FOXC1	JASPAR Predicted Transcription Factor Targets	1.0	null
D-Glucose	HMDB Metabolites of Enzymes	1.0	null
BRD-K59870481	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.49866
small intestine	HPA Tissue Protein Expression Profiles	1.0	1.71998
disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.893359
HCC2270	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.866329
r8 portion of ambiguous motor nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.54682
CCDC86	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00439884
carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.653276
mode of inheritance	HPO Gene-Disease Associations	1.0	null
FEN1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00572492
PMC9671114__F6	PFOCR Pathway Figure Associations 2024	1.0	null
NADK2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07369
BRD-K92879007	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.21139
stipule	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.635167
SLC1A6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00896955
BRD-K78162975	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.57415
cytoplasm	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.763617
Reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.59
SF3A2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00654065
Cardiac arrest	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.18
Atopic dermatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.043
Movement disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.14
Diabetes Mellitus	DisGeNET Gene-Disease Associations	1.0	null
Isomaltose	MW Enzyme Metabolite Associations	1.0	null
plasma membrane part	GO Cellular Component Annotations 2015	1.0	null
HS 766T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.75018
TNFRSF11A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00607652
BRD-K97761115	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.55272
PMC1134985__F3	PFOCR Pathway Figure Associations 2023	1.0	null
Malaria	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.669
CXCR5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00515732
hsa-miR-323-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.921135
periventricular stratum of m1AD	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.95897
GSE148692,GSE148695_7_v_3_satb2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
PMC3411424__F4	PFOCR Pathway Figure Associations 2024	1.0	null
Coronary artery disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.636
A-427	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.33986
SLC5A3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00447057
Nephrolithiasis	DisGeNET Gene-Disease Associations	1.0	null
urinary system disease	GWASdb SNP-Disease Associations	1.0	0.252163
HSC4	DepMap CRISPR Gene Dependency	1.0	12.2579
PMC6891791__F4	PFOCR Pathway Figure Associations 2024	1.0	null
GSE147210_3_v_4_kmt2d_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Bacterial infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.064
GSE158431_2_v_0_pioglitazone_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
ARF5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.48558
MMP9	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00714456
colonic epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.816904
AGO4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.7121
H3K4me3_Caco-2_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
snoutepidermis	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.23074
Bed nucleus of the accessory olfactory tract	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.52644
Atrial fibrillation	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.784
Muscle tissue disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.432
GSE133691_1_v_3_lgr5_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
NCI-H2342	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Cryptorchidism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.015
PMC8100412__F9	PFOCR Pathway Figure Associations 2024	1.0	null
Gaucher Disease	DisGeNET Gene-Disease Associations	1.0	null
PTGER4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0070548
NCI-H358	COSMIC Cell Line Gene Mutation Profiles	1.0	null
hsa-miR-302b	TargetScan Predicted Conserved microRNA Targets	1.0	1.11641
early endosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.158882
HUO-3N1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GSE148692,GSE148695_2_v_3_satb2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
cytoplasmic part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.738263
microvillus membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.91465
superficial stratum of m1AD	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.54505
RS11846	BioGPS Cell Line Gene Expression Profiles	1.0	0.920959
BRD-K21423050	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.98452
PMC7594527__F1	PFOCR Pathway Figure Associations 2024	1.0	null
MYC-20876797-MEDULLOBLASTOMA-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
Bone structure disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.267
Danon disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.076
residue	GeneRIF Biological Term Annotations	1.0	null
BRD-K94441233_mevastatin_PC3_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HT-144	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03442
BRD-K44131977	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.02865
Kidney failure	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.562
BRD-K14087001	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.13301
BRD-K00086692	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.33825
OVCA433	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SFMBT1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00740018
cluster	GeneRIF Biological Term Annotations	1.0	null
GAST	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00808747
SK-MES-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.949033
pancreatic duct	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.75495
PMC5278230__F7	PFOCR Pathway Figure Associations 2023	1.0	null
mody5	GeneRIF Biological Term Annotations	1.0	null
posterior (caudal) superior temporal cortex (area 22c)_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.02284
ARNT-22903824-MCF-7-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
NCI-H2052	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.948419
PON1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00694556
LS-411N	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ARH-77	COSMIC Cell Line Gene Mutation Profiles	1.0	null
investigation	GeneRIF Biological Term Annotations	1.0	null
ME-180	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Perturb_3804_KO_Cftr_SRP067491	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	6.14589
BRD-K54272776	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.20813
Lung disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.203
FASLG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.10088
cell type benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.221793
NO-10	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H2172	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Lipodystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.152
IKZF4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.68904
HCC15	CCLE Cell Line Gene CNV Profiles	-1.0	-1.58211
SOX2-18692474-MEFS-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
targeting	GeneRIF Biological Term Annotations	1.0	null
MMP23B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00625195
Generalized Glycogen Storage Disease Of Infants	DisGeNET Gene-Disease Associations	1.0	null
celecoxib	CTD Gene-Chemical Interactions	1.0	null
Proliferative diabetic retinopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.523
BRD-K52850071_-666_ASC_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Urinary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.728
PMC11666716-41698_2024_782_MOESM1_ESM.pdf-2-PRDM10_PRDM10	Rummagene Transcription Factor Associations 2026	1.0	null
starch and sucrose metabolism	KEGG Pathways	1.0	null
Prostate cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.408
ANKRD10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.52311
Bladder Urothelial Carcinoma_BLCA_TCGA-HQ-A2OF-01A-11R-A26T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Congestive heart failure	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.132
protein-energy malnutrition	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.078
limb	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.062301
extracellular region	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
CORL23	DepMap CRISPR Gene Dependency	1.0	2.32015
BRD-K76068355	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.45717
kidney cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.214202
SELENOM	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00555395
BRD-K44078665	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.01445
Mucopolysaccharidosis type IIIB	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.713
PMC9124206-41419_2022_4940_MOESM8_ESM.xlsx-DEG_PACA-CA-ID_PTF1A	Rummagene Transcription Factor Associations 2026	1.0	null
intracellular non-membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.364331
Intrinsic cardiomyopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.132
Hypertension	DisGeNET Gene-Disease Associations	1.0	null
FOXA1-25552417-VCAP-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Cerebrovascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.599
SNU-407	Sanger Dependency Map Cancer Cell Line Proteomics	-1.0	-2.01805
BRD-K60701773	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.02882
GPX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52893
exocrine pancreatic insufficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.690694
PMC9065266__F2	PFOCR Pathway Figure Associations 2024	1.0	null
Dengue Fever	DisGeNET Gene-Disease Associations	1.0	null
TBX3	ChEA Transcription Factor Targets	1.0	null
colorectal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.053
Fetallung	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.75647
GSE142019,GSE142021_10_v_3_ythdf2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
BRD-K67873600	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.22683
alpha-glucosidase activity	GO Molecular Function Annotations 2015	1.0	null
SLC26A1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00404092
TPH1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00589356
BRD-A39996500_radicicol_A375_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
oligo-1,6-glucosidase activity	GO Molecular Function Annotations 2015	1.0	null
BRD-K19381111	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.03734
VPREB3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00552779
GSE148695,GSE167281_2_v_1_satb2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Teeth hard tissue disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.09
SNU-216	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.935278
CBLIF	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00532447
extracellular vesicle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.057922
BRD-K77987907	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.3841
nephrolithiasis	HPO Gene-Disease Associations	1.0	null
GSE227891_2_v_3_ethanol_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
gastrointestinal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.23907
alkaptonuria	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.1541
ZMYM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.70065
BBC3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00575019
HCC2885	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.32477
OR2L3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00566552
SR	COSMIC Cell Line Gene Mutation Profiles	1.0	null
compound	GeneRIF Biological Term Annotations	1.0	null
ZCCHC12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00497602
catalytically	GeneRIF Biological Term Annotations	1.0	null
BRD-K15341710	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.36405
layer III of caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.5494
LYSMD4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90691
superficial stratum of r8Lim	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.54774
Lung squamous cell carcinoma_LUSC_TCGA-39-5027-01A-21R-1820-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
r10 part of the inferior olive	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.53285
Pneumatosis cystoides intestinalis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.545
pterigoid muscle trigeminal motor cell group	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.2825
Chromosomal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.045
PMC9577160__F2	PFOCR Pathway Figure Associations 2024	1.0	null
IZ in caudal perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-2.53185
hsa-miR-532-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
Breast cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.694
SNU-175	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HCC1395	CCLE Cell Line Gene CNV Profiles	-1.0	-2.20311
PMC6722120__F4	PFOCR Pathway Figure Associations 2024	1.0	null
abnormality of the genitourinary system	GWASdb SNP-Phenotype Associations	1.0	0.081137
plumule	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.082239
SU-DHL-8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.62268
head and face region of M1	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.57696
POLR3A_01_139	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	3.72489
intermediate part of StrSe	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.46121
NCI-H1688	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-JW-A69B-01A-11R-A32P-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K21363211	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.99214
Primary visual area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.61819
gastric mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.117081
abetalipoproteinemia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.307033
PMC5539260__F7	PFOCR Pathway Figure Associations 2024	1.0	null
Syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.996
Liver disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.418
BRD-K64890080_BI 2536_HCC515_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
KYSE-450	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Myasthenia gravis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.076
PMC3919509-NIHMS471461-supplement-3.xls-Table_S1-TP53_TP53	Rummagene Transcription Factor Associations 2026	1.0	null
Primary somatosensory area, upper limb, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.19537
BRD-K14019014	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.22232
CTV-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Balanitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.196
EZH2	ENCODE Transcription Factor Targets	1.0	null
cell part	GO Cellular Component Annotations 2015	1.0	null
SDK1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00587826
NFKBIE	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00638149
Prostate disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.465
posterior (caudal) superior temporal cortex (area 22c)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.6276
apical junction complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.572994
BRD-A38030642_cyclosporin A_VCAP_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Urethritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.103
pancreas	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.559254
BRD-A26095496_CLOBETASOL PROPIONATE_HCC515_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
EW22	DepMap CRISPR Gene Dependency	1.0	3.30511
Hepatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.883
Congenital lactase deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.739
four	GeneRIF Biological Term Annotations	1.0	null
Andersen-Tawil syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.139
GSE148692,GSE148695_1_v_3_satb2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-IZ-A6M9-01A-11R-A31O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
OVCAR-8	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.27164
BHY	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K37803976	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.45171
CNIH1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9102
BRD-K88472400	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.57572
cerebellar cortex_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.887925
enzyme	GeneRIF Biological Term Annotations	1.0	null
icSARS CoV_7Hour_None_GSE37827	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.73836
HT3	DepMap CRISPR Gene Dependency	1.0	17.136
NCIH2172	CCLE Cell Line Gene CNV Profiles	-1.0	-1.58749
Lung adenocarcinoma_LUAD_TCGA-49-6742-01A-11R-1858-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cos cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.312232
POU3F2-20337985-501MEL-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
r8 part of ventral parvicellular reticular formation	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.11221
outer CP in lateral temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.87386
Mucopolysaccharidosis Ih	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.048
Peripheral nervous system neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.016
inferior colliculus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.856399
six	GeneRIF Biological Term Annotations	1.0	null
MCC13	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H2347	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SNU-81	COSMIC Cell Line Gene Mutation Profiles	1.0	null
adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.792951
CTB-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCCIT	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Hypertension	CTD Gene-Disease Associations	1.0	1.56607
SLC35E1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12272
SH3GLB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69872
dorsolateral prefrontal cortex_26 pcw_F_12949	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.64185
CILP	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00626105
VZ in superolateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.0261
OAZ3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00486705
Mucopolysaccharidosis I	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.985
Retrosplenial area, ventral part, layer 6b	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	3.16764
GJD2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00575959
extracellular region part	GO Cellular Component Annotations 2015	1.0	null
Nephrolithiasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.422
Small intestine_CT1_absorptive	HuBMAP ASCT+B Augmented with RNA-seq Coexpression	1.0	null
dorsal part of m2A	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.42038
Leukemialymphoblastic(MOLT-4)	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.08772
PFKFB1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00639056
Perturb_3706_OE_Hif2a_SRP316426	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-13.9088
hsa-miR-4668-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
GSTA3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00504588
Perturb_9601_KO_Satb2_SRP307576	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	20.0
BRD-K52202153	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.01914
lateral part of the lateral habenular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.11653
CHP-126	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CAL-39	COSMIC Cell Line Gene CNV Profiles	1.0	2.06505
VCAM1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0103993
small intestine mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.487496
GSE196318_0_v_1_xpo4_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
embryo	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.535833
Testis	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.826761
gastric cardia adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.632384
BRD-K44287054	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.19178
vesicle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
MICU2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.81631
ZNF638	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.55007
15814623-Table3	GeneSigDB Published Gene Signatures	1.0	null
primary motor cortex (area M1, area 4)_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.40615
disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.667947
MAP2K2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00550287
VSIG10	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00710768
GSE148193_1_v_0_satb2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
apical plasma membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
hypolipoproteinemia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.131251
BRD-K75076471	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.31329
DSCAML1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00531516
inflammatory bowel disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.721673
primary auditory cortex (core)_23 yrs_M_12300	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.30996
abnormality of the abdomen	HPO Gene-Disease Associations	1.0	null
BRD-K22377875	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.18124
PMC12304111-41598_2025_13196_MOESM5_ESM.xlsx-Sheet_1-Table_S4_DEGs_Log2FC_1_and_p_adj_0_05_in_pancreatic_cancer_with_high_versus_low_OVOL1_expression_OVOL1	Rummagene Transcription Factor Associations 2026	1.0	null
NCI-H1048	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.48653
NCI-H2135	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Superior colliculus, motor related, deep white layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.5262
levothyroxine sodium-4069	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
superficial stratum of r2BI	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.30491
NCI-H146	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.49819
BRD-K85525164	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.66569
colonic cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.02413
Alzheimer's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.139
PMC9941047-41591_2022_2163_MOESM3_ESM.xlsx-ST12-Unnamed_1_KLF6	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-K95323755	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.77917
SCC9	DepMap CRISPR Gene Dependency	1.0	2.9148
KM-H2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
anterior olfactory area, dorsal part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.12733
PMC4033425__F3	PFOCR Pathway Figure Associations 2024	1.0	null
colon	GTEx Tissue Gene Expression Profiles	1.0	1.20379
GRK2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00784187
goblet cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.44497
OCI-M1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HOXB13-26457646-LNCAP-HUMAN-PROSTATE-CARCINOMA	ChEA Transcription Factor Targets 2022	1.0	null
BRD-K77273085	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01606
AHR	ChEA Transcription Factor Targets	1.0	null
BIN1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00685752
epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.74675
mantle zone of r8BL	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.04178
Renal Insufficiency	CTD Gene-Disease Associations	1.0	1.08407
AKR1C1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00521821
BRD-K78485176_Olmesartan_PC3_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
IL11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.08707
mantle zone of r5Lim	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.03782
TE1	CCLE Cell Line Gene Expression Profiles	-1.0	-1.65003
BRD-K46890865	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.2747
DEXAMETHASONE	DGIdb Drug Targets 2026	1.0	0.159434
GSE199255,GSE199356_6_v_1_pds5a_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.483
hippocampus (hippocampal formation)_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.18076
spinal (inferior) vestibular nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.49103
OVCAR433	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.49819
respiratory epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.969821
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4642-01B-01R-1305-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
parasitic helminthiasis infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.061595
PMC6615902__F4	PFOCR Pathway Figure Associations 2024	1.0	null
PMC7952134__F4	PFOCR Pathway Figure Associations 2023	1.0	null
Mucopolysaccharidosis type IIIA	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.702
PPARG	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00347465
SLC37A2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00541802
SNU81	CCLE Cell Line Gene Expression Profiles	1.0	1.64089
Cardiovascular system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.927
Colorectal adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.131
liminal part of the r8 alar plate	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.38261
Uterine cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.32
mantle zone of r9BL	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.01005
A2780	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-J9-A52B-01A-11R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K56429665_Calcipotriol_A375_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Diabetic cataract	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.15
HSP90AB1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00636529
SOX2-18692474-MESC-mouse	ChEA Transcription Factor Binding Site Profiles	1.0	null
calcinosis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.132204
lysosome	LOCATE Predicted Protein Localization Annotations	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-CH-5752-01A-11R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K52764062	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.68102
Water	HMDB Metabolites of Enzymes	1.0	null
GSE123887,GSE123888_3_v_1_hpgd_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
BRD-K47754225	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.48456
hippocampus (hippocampal formation)_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.11171
BRD-K60937893	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.58538
BRD-K05414181	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.06523
NCI-H716	GDSC Cell Line Gene Expression Profiles	1.0	1.81491
USP38	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78711
hepatoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.074701
Congenital disorder of glycosylation type II	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.41
COV504	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16466
organism form	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
HSD17B10	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00308557
CL34	CCLE Cell Line Gene Expression Profiles	1.0	1.43167
SIDT1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00708768
Perturb_4440_KO_Atoh1_SRP076034	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	1.82005
intermediate stratum of PPaA	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.03249
Carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.918
PMC11625982-AJH-100-10-s001.pdf-91-ZNF841_ZNF841	Rummagene Transcription Factor Associations 2026	1.0	null
CP in caudal subicular cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.4964
MDA-MB-453	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.934265
PMC10645393-jci-133-169200-s102.xlsx-Table_S14_AR-V_DNA-PK_DEGs-Unnamed_2_AR	Rummagene Transcription Factor Associations 2026	1.0	null
FOXA1-21915096-LNCAP-1F5-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
ATP1B2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00963078
NCVADR RES	BioGPS Cell Line Gene Expression Profiles	-1.0	-0.970358
HCN3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00667406
DB	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.19181
IL2RG	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00552431
GSE148692,GSE148695_5_v_3_satb2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Epithelial cell_Epithelium_Human	CellMarker Gene-Cell Type Associations	1.0	null
hsa-miR-373	TargetScan Predicted Conserved microRNA Targets	1.0	1.11641
SAA1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00859774
Sexual dysfunction	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.616
Hyperinsulinism	DisGeNET Gene-Disease Associations	1.0	null
PMC4166520__F1	PFOCR Pathway Figure Associations 2023	1.0	null
CD300A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00638547
BRD-K23203419	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.62392
SLC1A7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00490432
PMC9942993-pone.0281645.s002.xlsx-AR-as_all-SYMBOL_AR	Rummagene Transcription Factor Associations 2026	1.0	null
SW1463	GDSC Cell Line Gene Expression Profiles	1.0	2.69249
GSE107505_3_v_2_nanog_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
BRD-K12624449	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.06404
HCC827	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.908985
CHRNG	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00742201
Perturb_11444_KD_SLIRP_SRP069960	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-12.1681
BRD-K96170781	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.52126
hsa-miR-4282	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
BRD-K04875192	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.32836
HCC1599	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.32247
BT-549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26638
OVCAR-3	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GSE188870,GSE188871_4_v_5_kat7_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
SNU245	CCLE Cell Line Gene Expression Profiles	1.0	1.47135
BRD-K44916315	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.10457
substance-related disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.581
lateral septal nucleus, intermedio-ventral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.92253
superficial stratum of TTe	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.05044
Perturb_3820_KO_Satb2_SRP307573	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	20.0
PCI-38	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MOLT-4	COSMIC Cell Line Gene Mutation Profiles	1.0	null
disease by infectious agent	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.322637
PMC11276702__F7	PFOCR Pathway Figure Associations 2024	1.0	null
Glycogen storage disease II	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.616
NCIH1435	CCLE Cell Line Gene CNV Profiles	-1.0	-1.68497
ileum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.41676
IL11	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00632026
Barrett Esophagus	DisGeNET Gene-Disease Associations	1.0	null
ZNF607	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.63114
A427	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CACNA1H	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00765399
Alcoholic hepatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.103
Head and Neck squamous cell carcinoma_HNSC_TCGA-F7-8489-01A-31R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K50068274	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.63219
PANC 05.04	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.48839
BRD-K97086564	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.74395
MOCOS	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00623459
Kidney renal papillary cell carcinoma_KIRP_TCGA-GL-A9DC-01A-11R-A37K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
PMC6135464__F5	PFOCR Pathway Figure Associations 2024	1.0	null
kidney disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.046873
cardia	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.258917
MAPK6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00367851
Osmotic diarrhea	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.015
plasma membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
Niemann-Pick disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.801
Endocrine gland cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.932
Muscle Weakness	DisGeNET Gene-Phenotype Associations	1.0	null
CAL29	DepMap CRISPR Gene Dependency	1.0	2.58547
BRD-K90746817	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.18314
Paresis	DisGeNET Gene-Phenotype Associations	1.0	null
BRD-K49328983	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01239
Cholangitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.085
Mucopolysaccharidosis IVA	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.561
Colorectal carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.223
PMC8389562__F4	PFOCR Pathway Figure Associations 2024	1.0	null
hirschsprung's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.766351
pancreatic islet	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.122211
BRD-K57080016_-666_HT29_24.0_h_80.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
intracellular part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
ileocecum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.3645
BRD-K77697841	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.22826
inner CP in primary auditory cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.894228
non-membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.364331
periventricular stratum of r5BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.37572
CNTN5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00667215
SLC7A7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0068515
MDAMB415	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.704375
Skin hemangioma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.104
SW13	COSMIC Cell Line Gene Mutation Profiles	1.0	null
raphe obscurus nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.8731
End stage renal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.048
Metabolic dysfunction-associated steatotic liver disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.132
Hypothalamus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.21158
BRD-K69613314	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.31389
SW1088	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K42964952	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.17711
Disease	Reactome Pathways 2024	1.0	null
Cataract	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.721
Blood Spots	DisGeNET Gene-Disease Associations	1.0	null
KYSE270	DepMap CRISPR Gene Dependency	1.0	8.55624
anterior paraventricular nucleus of thalamus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.50879
KCNA7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00696274
Scheie syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.048
VWA1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00546358
BRD-A93393712_-666_HT29_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
cellsresults	GeneRIF Biological Term Annotations	1.0	null
Colon cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.715
embryo	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
Bed nuclei of the stria terminalis, posterior division, principal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.26965
opportunistic mycosis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.071188
H3255	COSMIC Cell Line Gene CNV Profiles	1.0	2.06505
BRD-K88156935	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.39833
primary motor-sensory cortex (samples)_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.881649
PMC4463661__F1	PFOCR Pathway Figure Associations 2023	1.0	null
lymphocytic	GeneRIF Biological Term Annotations	1.0	null
BRD-K29903249	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.09717
PMC10661700-41525_2023_383_MOESM2_ESM.xlsx-Supp_Table3_WBBC_GCR-SYMBOL_NR3C1	Rummagene Transcription Factor Associations 2026	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-EJ-5494-01A-01R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Necrosis	CTD Gene-Disease Associations	1.0	1.54111
ZNF106	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.84613
SOX17	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00870798
Dilated cardiomyopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.19
E2F7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.88793
CAD	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00383019
CCNB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.82664
PMC8740130__F6	PFOCR Pathway Figure Associations 2024	1.0	null
MAFK_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
endocrine system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.051892
colon	HPA Tissue Gene Expression Profiles	1.0	0.833057
rootlet	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.218398
IGLON5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00572068
Bile duct disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.25
Inner ear disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.045
GSE203308_8_v_10_brf1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
PRSS3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00419336
Lindane	CTD Gene-Chemical Interactions	1.0	null
hsa-miR-374a	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
GSE240027,GSE240030_5_v_4_atrx_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
S100A9	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00778449
greater	GeneRIF Biological Term Annotations	1.0	null
Hypothyroidism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.493
PMC12238561-42003_2025_8460_MOESM2_ESM.xlsx-IDs_S16_LF_C2_8h-Unnamed_5_LTF	Rummagene Transcription Factor Associations 2026	1.0	null
Perturb_1221_KO_Klf16/Maz/Sp1/Zbtb7a_SRP302435	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	15.9639
Perturb_9614_KO_Rprd1b_SRP241887	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	4.77142
origin	GeneRIF Biological Term Annotations	1.0	null
Colitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.715
EFO21	CCLE Cell Line Gene Expression Profiles	-1.0	-2.04246
hsa-miR-224	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.921135
Colorectal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.832
MRM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.1509
beta-D-Fructose	MW Enzyme Metabolite Associations	1.0	null
BRD-K95294904	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.27142
actin filament	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.317456
hsa-miR-302c	TargetScan Predicted Conserved microRNA Targets	1.0	1.11641
structure	GeneRIF Biological Term Annotations	1.0	null
Intestinal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.305
OCUB-M	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Renal fibrosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.079
TE-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
striatum_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.0916
PMC9942993-pone.0281645.s002.xlsx-AR_as_non-adaptive_as_maint-SYMBOL_AR	Rummagene Transcription Factor Associations 2026	1.0	null
lateral habenular nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.906452
Mucolipidosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.639
SNU-283	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Perturb_123_KD_Fto_SRP314220	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-20.0
PDE4B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00765957
axenic culture	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.265038
PMC6071020__F5	PFOCR Pathway Figure Associations 2023	1.0	null
IZ in midcingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.23463
Hypokalemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.206
PMC7273480__F9	PFOCR Pathway Figure Associations 2023	1.0	null
BRD-K88494268	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.32349
PMC6277783__F2	PFOCR Pathway Figure Associations 2024	1.0	null
fungal infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.050217
cytoplasmic vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.157578
PDGFRB	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00703179
SACROSIDASE	DGIdb Drug Targets 2026	1.0	6.6165
Anterior olfactory nucleus, external part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.48469
ADAM28	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00777724
GM1 gangliosidosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.749
BRD-K53308430_-666_VCAP_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SCLC-22H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23649
BRD-K14191038_JFD02227_MCF7_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
maturityonset	GeneRIF Biological Term Annotations	1.0	null
PMC6436215-13073_2019_626_MOESM2_ESM.xlsx-PCM-NFKB1_NFKB1	Rummagene Transcription Factor Associations 2026	1.0	null
COR-L47	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1967
Speech disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.088
PMC7258858__F1	PFOCR Pathway Figure Associations 2023	1.0	null
BRD-K26647686	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.67072
UBE2E2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00645621
Hypercholesterolemia	DisGeNET Gene-Disease Associations	1.0	null
megacolon	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.738676
PTPRJ	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00493997
Reperfusion Injury	DisGeNET Gene-Disease Associations	1.0	null
ZNF148_01_73	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	0.94802
BRD-K35544244	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.28428
Bed nuclei of the stria terminalis, anterior division, oval nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.13095
Perturb_17250_KO_Il17a_SRP069071	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-8.39334
NCI-H1770	COSMIC Cell Line Gene Mutation Profiles	1.0	null
IPC298	CCLE Cell Line Gene CNV Profiles	-1.0	-1.79117
PMC1134985__F3	PFOCR Pathway Figure Associations 2024	1.0	null
Atherosclerosis	CTD Gene-Disease Associations	1.0	1.05052
Autoimmune disease of central nervous system	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.239
PMC11530610-mmc3.xlsx-WGCNA-ZNF613_ZNF613	Rummagene Transcription Factor Associations 2026	1.0	null
PMC7350255__F8	PFOCR Pathway Figure Associations 2023	1.0	null
ACSS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.02435
Congenital muscular dystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.297
Disease of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.323
PMC12238561-42003_2025_8460_MOESM2_ESM.xlsx-IDs_S27_LF_C2_24h-Unnamed_5_LTF	Rummagene Transcription Factor Associations 2026	1.0	null
PMC8447736__F5	PFOCR Pathway Figure Associations 2024	1.0	null
central nucleus of the inferior colliculus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.13095
NPM1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00573695
CENPL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.20034
Muscular Dystrophy	DisGeNET Gene-Disease Associations	1.0	null
CDKL4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00689565
NCI-H1734	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.27969
intracellular	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.872266
BRD-K47988839	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.49952
PMC3489928__S4	PFOCR Pathway Figure Associations 2023	1.0	null
caudal subdivision of paraventricular nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.37171
ventrolateral prefrontal cortex_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.925449
Cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.266
YAP1-20516196-MESC-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
Perinatal necrotizing enterocolitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.377
BRD-K54467766	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.86758
Lateral septal nucleus, rostral (rostroventral) part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.54505
inferolateral temporal cortex (area TEv, area 20)_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.22441
anterior (rostral) cingulate (medial prefrontal) cortex_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.982481
NCI-H23	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.842217
BRD-A84481105_thioridazine_HT29_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
sucraseisomaltase	GeneRIF Biological Term Annotations	1.0	null
PMC6313860__F2	PFOCR Pathway Figure Associations 2024	1.0	null
apical part of cell	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.43951
membrane	GO Cellular Component Annotations 2015	1.0	null
PRKACA	Pathway Commons Protein-Protein Interactions	1.0	null
jejunal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.55843
intestine	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
cell surface	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.573828
LOVO	COSMIC Cell Line Gene Mutation Profiles	1.0	null
r3 liminal central gray	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.1453
Perturb_11362_KD_METTL3_SRP292229	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	3.25476
Pheochromocytoma and Paraganglioma_PCPG_TCGA-RW-A685-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Autoimmune disease of endocrine system	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.329
viscus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.95776
Hypertension	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.779
Gingival disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.011
duodenum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.03302
GSE124471,GSE124488_1_v_0_lats1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
flower	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.065363
BRD-A89554862	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.18654
Hypoglycemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.316
NCIH810	CCLE Cell Line Gene Expression Profiles	1.0	2.19707
PMC2586935__F4	PFOCR Pathway Figure Associations 2024	1.0	null
layer IIIu of area 35c	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.06782
lipid storage disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.062949
orbital frontal cortex_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.14229
HCC2185	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.00872
Urinary bladder cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.443
carbohydrate metabolic process	GO Biological Process Annotations 2015	1.0	null
almotriptan	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.30316
AHR-22903824-MCF7-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
PEO4	DepMap CRISPR Gene Dependency	1.0	2.84414
RFX8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.29898
PMC8009526__F1	PFOCR Pathway Figure Associations 2024	1.0	null
SU-DHL-4	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Retinal edema	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.419
M14	COSMIC Cell Line Gene Mutation Profiles	1.0	null
membrane region	GO Cellular Component Annotations 2015	1.0	null
BRD-K37687095_AZD-8330_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
FOSL1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00647051
BRD-K34985200	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.02176
Mucolipidosis II alpha/beta	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.476
adenocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.63856
endoplasmic reticulum	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.537827
BRD-A10188456_DEXAMETHASONE_HCC515_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Mucopolysaccharidosis type IVB	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.178
hsa-miR-520c-3p	TargetScan Predicted Conserved microRNA Targets	1.0	1.26663
layer 2 of LOT	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.49541
leaf	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.083775
dorsolateral prefrontal cortex_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.36996
abnormality of the urinary system	GWASdb SNP-Phenotype Associations	1.0	1.0833
Neuromuscular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.151
posteroventral (inferior) parietal cortex_16 pcw_M_12287	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.05405
t61-colon_female_8w	MoTrPAC Rat Endurance Exercise Training	1.0	7.73139
Hyperuricemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.802
BRD-K49584388	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.15445
BRD-K44576681	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.83261
NCI-H1435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.34439
pathogenesis	GO Biological Process Annotations 2015	1.0	null
20436685-ST6-2	GeneSigDB Published Gene Signatures	1.0	null
BRD-K47092271	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.9138
NCI-H810	GDSC Cell Line Gene Expression Profiles	1.0	2.86231
PMC11459127-pnas.2406837121.sd04.xlsx-Sheet1-AR_AR	Rummagene Transcription Factor Associations 2026	1.0	null
Congenital hemolytic anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.142
BRD-K06009608_-666_VCAP_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NCI-H1355	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PMC4082627-12864_2014_6197_MOESM8_ESM.xlsx-GATA3_only-Gene_Name_GATA3	Rummagene Transcription Factor Associations 2026	1.0	null
brush border	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	2.56184
DKC1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00615243
CPC-N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.872163
muscle	GTEx Tissue Gene Expression Profiles	-1.0	-1.05135
colonic mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.374993
BRD-K30214445	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.00654
Lung non-small cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.099
BRD-K15393664	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.54298
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6954-01A-11R-1915-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H345	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-GL-7966-11A-01R-2204-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TOR4A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.69423
20436685-ST4-1	GeneSigDB Published Gene Signatures	1.0	null
Major island of Calleja	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.23014
VGLL3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00388771
Sucrose	MW Enzyme Metabolite Associations	1.0	null
PMC7905684__F1	PFOCR Pathway Figure Associations 2024	1.0	null
PMC8766486-42003_2021_2990_MOESM3_ESM.xlsx-ST12-Unnamed_8_KLF6	Rummagene Transcription Factor Associations 2026	1.0	null
exocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.00676
superficial stratum of r1BI	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.32771
young	GeneRIF Biological Term Annotations	1.0	null
BRD-K60287130	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.42282
periventricular stratum of r6Tr	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.19424
GAS6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00664432
RASAL3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00511683
r8 part of linear nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.33689
nephrocalcinosis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.218715
ALOX5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00439476
GSE148692,GSE148695_7_v_6_satb2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.053
Anterior olfactory nucleus, dorsal part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.93987
NCIH226	CCLE Cell Line Gene CNV Profiles	-1.0	-1.9953
morphological abnormality of the gastrointestinal tract	HPO Gene-Disease Associations	1.0	null
Artery disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.877
adult	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.920344
PE01	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02732
BRD-A13133631_FLUOROMETHOLONE_HCC515_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PMC6588834__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Hemophilia B	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.458
BRD-K81418486_vorinostat_H1299_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Rheumatoid arthritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.643
PMC3444437__F9	PFOCR Pathway Figure Associations 2023	1.0	null
bone	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054809
Mediodorsal nucleus of thalamus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.29101
superficial stratum of r7BL	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.12365
disease	DISEASES Experimental Gene-Disease Association Evidence Scores	1.0	0.052255
Genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.606
NU-DUL-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PMC7521272__F4	PFOCR Pathway Figure Associations 2024	1.0	null
Organic acidemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.096
orbital frontal cortex_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.55959
Bronchitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.717
VMRC-MELG	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GRIK3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0051676
Sucrase Deficiency	DisGeNET Gene-Disease Associations	1.0	null
Diarrhea	DisGeNET Gene-Phenotype Associations	1.0	null
FASTKD2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00549949
phenylalanine	GeneRIF Biological Term Annotations	1.0	null
NEK4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00444289
pancreatic alpha cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.547724
SUM 52PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00368
EPHA10	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0074425
Hepatic encephalopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.211
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EK-A3GM-01A-11R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-A70407468_PSB 36_A375_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
TE8	CCLE Cell Line Gene Expression Profiles	-1.0	-1.84921
OVCAR8	CCLE Cell Line Gene CNV Profiles	-1.0	-2.59447
phosalone	CTD Gene-Chemical Interactions	1.0	null
BRD-K20718732_-666_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
layer 6a of PrS	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.61882
Colorectal Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
PMC2748802__F18	PFOCR Pathway Figure Associations 2023	1.0	null
Fatty Liver Disease	DisGeNET Gene-Disease Associations	1.0	null
PMC10526229__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Stomach cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.323
diarrhea	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.45704
TCF3/E2A-22897851-JUKARTE6-1-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
PMC4046179__F5	PFOCR Pathway Figure Associations 2023	1.0	null
PRSS36	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00861907
BRD-K16403365	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.36431
PDRG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92321
DLG3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0107358
NCI-H2196	COSMIC Cell Line Gene Mutation Profiles	1.0	null
lactose intolerance	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.02945
YY1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0057606
abnormality of the urinary system	HPO Gene-Disease Associations	1.0	null
PMC10661700-41525_2023_383_MOESM2_ESM.xlsx-Supp_Table4_gnomAD_EAS_GCR-SYMBOL_NR3C1	Rummagene Transcription Factor Associations 2026	1.0	null
SUV39H2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00487629
Xerosis	DisGeNET Gene-Disease Associations	1.0	null
stratum pyramidale of caudal CA3	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.74142
Lung adenocarcinoma_LUAD_TCGA-97-7941-01A-11R-2187-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RC-K8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.871199
superficial stratum of r8BL	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.59676
HCC33	CCLE Cell Line Gene CNV Profiles	1.0	1.79433
Autonomic neuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.909
colitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.381852
musculoskeletal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.04279
hsa-miR-549	TargetScan Predicted Conserved microRNA Targets	1.0	1.45615
PMC8670134__F2	PFOCR Pathway Figure Associations 2024	1.0	null
BRD-K41271559	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.82124
Anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.841
METTL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.81652
organic acidemia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.177576
HAPLN1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00524411
RHOU	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91677
lateral part of r9B	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.00874
L-363	COSMIC Cell Line Gene Mutation Profiles	1.0	null
dorsolateral preisthmic part of periaqueductal gray	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.29101
JHH-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
intrinsic component of membrane	GO Cellular Component Annotations 2015	1.0	null
PMC12238561-42003_2025_8460_MOESM2_ESM.xlsx-IDs_S05_LF_C2_3h-Unnamed_5_LTF	Rummagene Transcription Factor Associations 2026	1.0	null
apud cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.80563
Transient cerebral ischemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.76
amebiasis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.308118
PMC10545357-medi-102-e35220-s002.xlsx-intersection_targets-NR3C2_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
CNTN3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00436195
BEN	GDSC Cell Line Gene Expression Profiles	1.0	1.64392
BRD-A57762296	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.35364
CTXN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51411
PMC5016207__F2	PFOCR Pathway Figure Associations 2023	1.0	null
PMC7035310__F3	PFOCR Pathway Figure Associations 2023	1.0	null
Nasopharyngeal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.456
BRD-K97263385	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.35643
PMC4935219__F1	PFOCR Pathway Figure Associations 2024	1.0	null
amygdaloid complex_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.45958
abnormal renal morphology	HPO Gene-Disease Associations	1.0	null
organelle	GO Cellular Component Annotations 2015	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-DK-A3IV-01A-22R-A21D-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Postsubiculum, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.14374
PMC9105255__F6	PFOCR Pathway Figure Associations 2024	1.0	null
SLC2A2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00514133
PMC4166520__F1	PFOCR Pathway Figure Associations 2024	1.0	null
OLIG1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00788864
metabolic process	GO Biological Process Annotations 2015	1.0	null
TBX3-20139965-MESC-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
superficial stratum of r9Lim	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.37531
mesenchymal cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.244545
BRD-A35869383_ibrutinib_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
direct	GeneRIF Biological Term Annotations	1.0	null
Blood coagulation disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.351
CD3E	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00571494
MDAMB157	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.04212
MCCC1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00588527
layer I of piriform cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.31145
Lung squamous cell carcinoma_LUSC_TCGA-66-2754-01A-01R-0980-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TICAM2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0102781
BEN	CCLE Cell Line Gene Expression Profiles	1.0	2.65493
BRD-K10707948	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.42569
Primary immunodeficiency disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.305
ventrolateral periolivary nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.55896
intracellular membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.790564
LAX1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00581008
Kidney renal clear cell carcinoma_KIRC_TCGA-B8-4143-01A-01R-1188-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Breast adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.237
Arthritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.078
UMC-11	GDSC Cell Line Gene Expression Profiles	1.0	2.01243
autosomal recessive inheritance	HPO Gene-Disease Associations	1.0	null
COLO 829	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0772
IGR-37	COSMIC Cell Line Gene Mutation Profiles	1.0	null
diarrhea	HPO Gene-Disease Associations	1.0	null
striatum_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.59859
Paramedian lobule, granular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.15483
E2F1	JASPAR Predicted Transcription Factor Targets	1.0	null
Myeloid leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.04
SNU626	CCLE Cell Line Gene CNV Profiles	-1.0	-1.45934
MDAMB361	DepMap CRISPR Gene Dependency	1.0	3.35115
PMC8114929__F3	PFOCR Pathway Figure Associations 2024	1.0	null
attenuated	GeneRIF Biological Term Annotations	1.0	null
BRD-K45136330	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.41653
prevention	GeneRIF Biological Term Annotations	1.0	null
central nuclear group	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.18314
BRD-K55763052	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.13421
Entorhinal area, lateral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.34165
cell culture	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.749992
pilus	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.182422
CD8B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00754997
PMC10709143-41556_2023_1271_MOESM9_ESM.xls-Up_in_PAX7--Target_name_PAX7	Rummagene Transcription Factor Associations 2026	1.0	null
oligo-1,6-glucosidase activity	GO Molecular Function Annotations 2023	1.0	null
Galactose mutarotase-like domain	InterPro Predicted Protein Domain Annotations	1.0	null
BRD-K03188480	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.12517
Nucleus of the lateral olfactory tract, pyramidal layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.15159
hyperglycemia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.227988
ISTMES1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.67046
STAT3-23295773-U87-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
NR2F6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00385527
H2BC14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.29002
mesenchyme	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.404797
Becker muscular dystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.312
Bronchial disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.956
alpha-glucosidase activity	GO Molecular Function Annotations 2023	1.0	null
Familial hyperlipidemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.883
Dementia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.004
Autosomal recessive disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.623
Cerebral infarction	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.614
intestinal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.02777
SW1116	CCLE Cell Line Gene Expression Profiles	1.0	1.4992
filamentous actin	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.254017
ACARBOSE	DGIdb Drug Targets 2026	1.0	2.2055
IMPDH1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00590183
NCIH1734	CCLE Cell Line Gene CNV Profiles	1.0	1.52654
maintained	GeneRIF Biological Term Annotations	1.0	null
alpha-1,4-glucosidase activity	GO Molecular Function Annotations 2015	1.0	null
U266B1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.996228
INSM2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00969414
posterior (caudal) superior temporal cortex (area 22c)_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.985108
tarsal bone	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.163387
HT	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Autosomal dominant disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.622
short bowel syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.10636
Lymphnode	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.11873
COLO 320DM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.45912
KYSE-140	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K50271780	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.38365
Primary visual area, layer 5	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.203
Inflammatory bowel disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.978
COR-L23	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PMC7276545__F2	PFOCR Pathway Figure Associations 2023	1.0	null
ADRB1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00540322
Uterine Carcinosarcoma_UCS_TCGA-N5-A4RJ-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC7281325__F3	PFOCR Pathway Figure Associations 2024	1.0	null
laminin-1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.26385
determinant	GeneRIF Biological Term Annotations	1.0	null
nucleus of the lateral olfactory tract	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.19048
BFTC905	CCLE Cell Line Gene CNV Profiles	1.0	1.34018
primary motor cortex (area M1, area 4)_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.11507
columnar cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.950823
metacetamol	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.27372
BRD-K02024244	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.52268
PMC4750533__F1	PFOCR Pathway Figure Associations 2023	1.0	null
Obstructive lung disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.818
Tonsillitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.112
nectar	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.347408
SK-OV-3	COSMIC Cell Line Gene Mutation Profiles	1.0	null
layer V of area 35c	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.883405
BRD-K05104363_PD-184352_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K47776393	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.00987
gland	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.23362
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7414-01A-11R-2081-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PCGF2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00476939
ARNT	ChEA Transcription Factor Targets	1.0	null
TOV-21G	COSMIC Cell Line Gene Mutation Profiles	1.0	null
brush border membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.94531
GSE159423_1_v_0_il22_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Tauopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.137
ht-29 g cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.0828
BRD-K36997940	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.53278
SW948	CCLE Cell Line Gene CNV Profiles	1.0	2.19
BRD-K01286616	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.25869
BRD-K64376499	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.1647
gametocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.159568
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-4735-01A-01R-1436-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Hypertrophic Cardiomyopathy	DisGeNET Gene-Disease Associations	1.0	null
HCC95	CCLE Cell Line Gene CNV Profiles	1.0	1.48011
BRD-K74632893	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.99162
Kidney renal papillary cell carcinoma_KIRP_TCGA-DW-7837-01A-11R-2139-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC6206292__F3	PFOCR Pathway Figure Associations 2024	1.0	null
Glycogen Storage Disease	DisGeNET Gene-Disease Associations	1.0	null
trans-golgi network	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.695148
Parkinson's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.78
GP5D	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K50432649	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.42765
alpha-mannosidosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.63
Male reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.814
Prolactinoma	DisGeNET Gene-Disease Associations	1.0	null
Cholecystitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.143
BRD-K40621788	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.22183
ME-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
pancreas	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.0737
BRD-K39499927	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.1383
r2 part of the trigeminal motor nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.2078
glucose	GeneRIF Biological Term Annotations	1.0	null
PMC10661700-41525_2023_383_MOESM2_ESM.xlsx-Supp_Table7_gnomAD_AMR_GCR-SYMBOL_NR3C1	Rummagene Transcription Factor Associations 2026	1.0	null
POU3F2-20337985-501MEL-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-A4-8098-01A-11R-2404-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
STAT3	ENCODE Transcription Factor Targets	1.0	null
colorectal cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.05461
Perturb_10623_OE_Vcp_SRP214099	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	1.5029
DYRK2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00579816
IFIT3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00588644
BRD-K69918256	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.07125
Prostate adenocarcinoma_PRAD_TCGA-HC-7081-01A-11R-1965-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FUS-26573619-CHIP-SEQ-HEK293-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Isomaltose	HMDB Metabolites of Enzymes	1.0	null
hsa-miR-302e	TargetScan Predicted Conserved microRNA Targets	1.0	1.26663
cv-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.195151
pancreatic alpha cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.189151
plasma membrane part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.51864
TMEM88B_KD_GPL10558_471_human_cardiovascular progenitors cells differentiated from hES cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
inner CP in temporal polar cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.88085
Centronuclear myopathy X-linked	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.094
Bone resorption disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.841
PMC6345743__F5	PFOCR Pathway Figure Associations 2024	1.0	null
BRD-K21635266	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.54806
ES1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
internal globus pallidus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.37572
Secretory diarrhea	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.213
ANXA1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00346932
Interanteromedial nucleus of the thalamus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.44571
MM.1S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13006
CA6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00386724
IL13	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00888759
PMC4463661__F1	PFOCR Pathway Figure Associations 2024	1.0	null
PMC5741957__F3	PFOCR Pathway Figure Associations 2023	1.0	null
TADA3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69777
GLI1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82064
15273739-SuppTable2	GeneSigDB Published Gene Signatures	1.0	null
Sensory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.298
periventricular stratum of SC	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.50879
periaqueductal gray substance, ventral portion	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.0067
Acanthosis nigricans	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.178
Thalamus, polymodal association cortex related	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.2805
CTSK	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00586958
Prostate adenocarcinoma_PRAD_TCGA-EJ-5514-01A-01R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CLEC4G	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00512977
NR3C1-21868756-MCF10A-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
inner SZ in posterior parahippocampal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.09057
Glycoside hydrolase superfamily	InterPro Predicted Protein Domain Annotations	1.0	null
hsa-miR-3671	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
kidney	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.35334
PMC4935219__F1	PFOCR Pathway Figure Associations 2023	1.0	null
Diabetic angiopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.292
PMC12238561-42003_2025_8460_MOESM2_ESM.xlsx-IDs_S12_LF_C1_8h-Unnamed_5_LTF	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-K95111937	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.52761
CDK6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0069745
BRD-K19710723	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.25066
intrinsic component of membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.69427
ABCC9	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00823439
primary somatosensory cortex (area S1, areas 3,1,2)_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.875853
Hyperglycemia	CTD Gene-Disease Associations	1.0	1.04831
intestinal	GeneRIF Biological Term Annotations	1.0	null
BRD-K90675978	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.25061
REG1A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00473445
GSE244072_2_v_1_tfeb_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
glucose metabolism disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.574605
RELT	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0071309
KMH-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K87849910	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.05184
pernicious anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.167915
HMGB1P1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.3059