association dataset threshold value standardized value pontine reticular formation, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.856229 NCIH2291 CCLE Cell Line Gene CNV Profiles -1.0 -2.4301 hippocampus (hippocampal formation)_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.12196 Prostate adenocarcinoma_PRAD_TCGA-KK-A7B2-01A-12R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null inner portion of medial ganglionic eminence Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.992641 Head and Neck squamous cell carcinoma_HNSC_TCGA-CR-7399-01A-11R-2016-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZIM3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 36.0193 CA3 field, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.826957 hsa-miR-4699-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.40969 TP63-23658742-EP156T-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null H3K27me3_BJ_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-DU-7012-01A-11R-2027-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Adult T-cell lymphoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.321 TCEAL3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.58548 RAD21_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null primary somatosensory cortex (area S1, areas 3,1,2)_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.88363 Spondylometaphyseal dysplasia Sedaghatian type DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.117 CPC-N Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.951182 Sarcoma_SARC_TCGA-DX-A6BE-01A-41R-A32Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ACADM CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.09221 amygdalohippocampal transition zone, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.6232 pyramidal layer of rostral subiculum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.869813 precentral gyrus, right, bank of the precentral sulcus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.960104 MM485 DepMap CRISPR Gene Dependency 1.0 3.15432 AGS Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.860311 HEY cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.563 Sarcoma_SARC_TCGA-DX-AB2Z-01A-11R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TGBC52TKB DepMap CRISPR Gene Dependency 1.0 2.28911 SCN4B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.21655 abnormality of the nervous system GWASdb SNP-Phenotype Associations 1.0 0.488332 TMEM143 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.05978 IKBIP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.96488 amygdaloid complex_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.53794 haptoglobin-hemoglobin complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.684 H3K9me3_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null T98G Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.10198 YMB-1-E Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.29589 Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-5359-01A-01R-1436-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GATA3-26560356-CHIP-SEQ-TH1-HUMAN ChEA Transcription Factor Targets 2022 1.0 null TBX3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 26.1606 METTL9 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.162 cortico-medial group, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.15708 H3K9me3_U2OS_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null JUN-26020271-SMOOTH-MUSCLE-HUMAN ChEA Transcription Factor Targets 2022 1.0 null WDR5B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.63597 RAD21_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null adrenal gland HPA Tissue Protein Expression Profiles 1.0 0.966326 Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7JV-01A-11R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null mediodorsal nucleus of thalamus_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.994344 RAD21 ENCODE Transcription Factor Targets 1.0 null PMC8752721-42003_2021_2991_MOESM4_ESM.xlsx-Fig3_E2F2-gene_E2F2 Rummagene Transcription Factor Associations 2026 1.0 null hsa-miR-4697-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.7397 GNAO1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.49127 hsa-miR-3190 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.965816 intracellular organelle LOCATE Predicted Protein Localization Annotations 1.0 null Prostate adenocarcinoma_PRAD_TCGA-YL-A8HO-01A-11R-A36G-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null posterior (caudal) superior temporal cortex (area 22c)_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.73702 Adrenocortical carcinoma_ACC_TCGA-OR-A5JV-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null VPS29 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.47563 small intestine HPA Tissue Protein Expression Profiles 1.0 0.966326 testis TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7425-11A-01R-2081-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Nervous system TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 AIF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.9415 Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A3B8-01A-31R-A20F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TestisIntersitial BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 2.2603 GSE159678_4_v_2_chloroquine_human RummaGEO Drug Perturbation Signatures 1.0 null ABC-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 3.16493 intracellular part LOCATE Predicted Protein Localization Annotations 1.0 null DorsalRootGanglion BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 0.959752 MSX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.4335 ETV5::FIGLA JASPAR Predicted Human Transcription Factor Targets 2025 1.0 42.2212 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5191-01A-01R-1426-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MSX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.6628 TBCD CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.15795 Pancreatic adenocarcinoma_PAAD_TCGA-HZ-8637-01A-11R-2404-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-EE-A3JE-06A-11R-A20F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null primary visual cortex (striate cortex, area V1/17)_10 mos_M_12977 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.79385 GSE152441,GSE152442_6_v_3_folic acid_human RummaGEO Drug Perturbation Signatures -1.0 null A549 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.904545 Female reproductive gland TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 MZ in caudal perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.42564 EZH2_myotube_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-77-7335-11A-01R-2045-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GSE152441,GSE152442_0_v_3_folic acid_human RummaGEO Drug Perturbation Signatures -1.0 null SLC5A6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.38869 limitans nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.862858 Sarcoma_SARC_TCGA-SI-A71P-01A-12R-A33J-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PALD1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.92898 VZ in caudal cingulate neocortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.854712 GSE152441,GSE152442_6_v_5_folic acid_human RummaGEO Drug Perturbation Signatures -1.0 null BHLHE40 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.5698 orbital frontal cortex_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.959308 HDLM2 CCLE Cell Line Gene CNV Profiles -1.0 -1.58794 KP-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.892649 TBX4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 29.2851 496100474_FWM_possible Alzheimer's disease_TBI_89_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 3.85287 RASGRP4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.0951 CTCF_endothelial cell of umbilical vein_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCC70 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.988117 CTCF_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null RHOC CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.92389 QTRT2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.59371 PMC11309649-medi-103-e37185-s002.xlsx-Sheet1-FOS_FOS Rummagene Transcription Factor Associations 2026 1.0 null NAP1L4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.13119 Lung squamous cell carcinoma_LUSC_TCGA-43-5670-11A-01R-2125-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GSE133516_0_v_6_kat7_human RummaGEO Gene Perturbation Signatures 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-21-1076-01A-01R-0692-07,TCGA-21-1076-01A-02R-0692-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-22-5481-11A-01R-1949-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Brain Lower Grade Glioma_LGG_TCGA-HT-7473-01A-11R-2027-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HCC38 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.4895 hsa-miR-3185 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.55165 OCT4-20526341-ESCS-HUMAN ChEA Transcription Factor Targets 2022 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-GF-A4EO-06A-12R-A24X-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PMC10933434-44319_2024_69_MOESM2_ESM.xls-HRV16-UV_vs_MI-Ensembl_MITF Rummagene Transcription Factor Associations 2026 1.0 null GSE152441,GSE152442_1_v_2_folic acid_human RummaGEO Drug Perturbation Signatures 1.0 null TFEB JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.5578 ARNT2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.17 H3K9me3_myotube_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null dorsolateral prefrontal cortex_17 pcw_F_12880 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -2.14609 EZH2 ENCODE Transcription Factor Targets 1.0 null GALNT7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.59607 muscle GTEx Tissue Gene Expression Profiles -1.0 -1.10936 NCI-H727 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.19082 H3K9me3_osteoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-WN-A9G9-01A-12R-A37K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_fibroblast of mammary gland_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ZR-75-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.29644 lateral medullary reticular group, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.969061 PSN1 CCLE Cell Line Gene CNV Profiles 1.0 1.44656 ZNF746 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.15254 Bladder Urothelial Carcinoma_BLCA_TCGA-DK-A2I4-01A-11R-A21D-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MDAMB361 DepMap CRISPR Gene Dependency 1.0 6.84856 H3K9me3_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Pheochromocytoma and Paraganglioma_PCPG_TCGA-S7-A7WV-01A-11R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Mean platelet volume GWAS Catalog SNP-Phenotype Associations 2025 1.0 3.22218 Adrenocortical carcinoma_ACC_TCGA-OR-A5K6-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCCSTCK140 CCLE Cell Line Gene Expression Profiles -1.0 -1.47109 AGXT CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.47511 COV362 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.36224 Brain TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 abnormal kidney morphology IMPC Knockout Mouse Phenotypes 1.0 null SLC27A1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.8402 LYRM7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.95925 Skin sarcoidosis DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.396 Brain Lower Grade Glioma_LGG_TCGA-S9-A7R2-01A-21R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null testis_7e HPA Tissue Sample Gene Expression Profiles 1.0 1.29191 spleen GTEx Tissue Gene Expression Profiles 1.0 1.20903 Acute Myeloid Leukemia_LAML_TCGA-AB-2948-03A-01T-0740-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null male reproductive system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null BT549 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 1.45512 HOXB13 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 32.7396 JHUEM3 CCLE Cell Line Gene Expression Profiles -1.0 -1.46234 KPNYN DepMap CRISPR Gene Dependency 1.0 2.09129 posteroventral (inferior) parietal cortex_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.962443 layer VI of caudal entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.51995 Prostate adenocarcinoma_PRAD_TCGA-J9-A8CM-01A-11R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null lateral hypothalamic area, anterior part Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.00137 PANC 08.13 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.46932 ML-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.64846 ZFP28 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.79605 RPMI-7951 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.092 Brain Lower Grade Glioma_LGG_TCGA-FN-7833-01A-11R-2090-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZEB1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.4997 G118 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.40758 THP1 CCLE Cell Line Gene CNV Profiles -1.0 -2.02531 SP in caudal hippocampal proper Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.24223 NOL11 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 5.9248 PMC10363146-41598_2023_38681_MOESM1_ESM.pdf-369-TTF1_TTF1 Rummagene Transcription Factor Associations 2026 1.0 null urogenital system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null KOSC2 DepMap CRISPR Gene Dependency 1.0 4.84158 PANO1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.81654 inferolateral temporal cortex (area TEv, area 20)_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.11309 Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-4857-01A-01R-1305-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4697-01A-01R-1277-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null FOXD2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 40.9656 Developmental disorder of mental health DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 0.505 HCC1493 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.87836 SKBR3 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.671617 Pancreatic adenocarcinoma_PAAD_TCGA-IB-7652-01A-11R-2156-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null subcallosal cingulate gyrus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.07467 Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-5358-01A-01R-1514-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TestisGermCell BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 1.31354 NR4A1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.5783 NCI-H1373 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.2219 HOXA10 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 23.1982 Neuro D MotifMap Predicted Transcription Factor Targets 1.0 null hippocampus (hippocampal formation)_16 pcw_M_12879 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.10495 SMC3_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null testis_4a HPA Tissue Sample Gene Expression Profiles 1.0 1.16666 HCC1428 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -1.10419 UM-UC-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.904545 HES6 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.2617 Rectum adenocarcinoma_READ_TCGA-AF-2690-01A-02R-1736-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Brain Lower Grade Glioma_LGG_TCGA-HT-8013-01A-11R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-A4-7915-01A-11R-2204-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CAS-1 COSMIC Cell Line Gene Mutation Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-6019-01A-11R-1686-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Systemic lupus erythematosus GWAS Catalog SNP-Phenotype Associations 2025 1.0 0.752288 Skin Cutaneous Melanoma_SKCM_TCGA-EE-A3JH-06A-11R-A21D-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZNF324 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 33.7355 JUN ENCODE Transcription Factor Targets 1.0 null PMC9894241-pnas.2211429119.sd05.xlsx-G6_REST-Dataset_S6_Differentially_expressed_genes_in_G1-G8_REST Rummagene Transcription Factor Associations 2026 1.0 null RCC10RGB DepMap CRISPR Gene Dependency 1.0 2.67322 H3K9me3_A549_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GSE94849_6_v_4_pinometostat_human RummaGEO Drug Perturbation Signatures -1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4985-01A-01R-1334-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung adenocarcinoma_LUAD_TCGA-44-6148-11A-01R-1858-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K27me3_fibroblast of lung_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-FG-A70Y-01A-12R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZNF175 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 37.5251 NCI-H345 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.22544 CTCF_GM20000_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EW22 DepMap CRISPR Gene Dependency 1.0 3.55824 GBGT1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.12307 medial habenular nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -2.1516 NCI-H2052 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.904545 appendix HPA Tissue Gene Expression Profiles 1.0 0.956966 LASV_FML29_8hr_24069471_GSE41300 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 1.49059 testis HPA Tissue Protein Expression Profiles 1.0 0.966326 mediodorsal nucleus of thalamus_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.951683 HCC202 COSMIC Cell Line Gene Mutation Profiles 1.0 null HCC202 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.765134 Brain Lower Grade Glioma_LGG_TCGA-HT-7601-01A-11R-2090-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Brain Lower Grade Glioma_LGG_TCGA-VM-A8C8-01A-11R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCIH1435 CCLE Cell Line Gene Expression Profiles 1.0 1.41876 Skin Cutaneous Melanoma_SKCM_TCGA-DA-A3F8-06A-11R-A20F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null LBX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 13.1552 PMC11461876-42003_2024_6975_MOESM5_ESM.xlsx-Supplementary_Data_3-Supplementary_Data_3_Differentially_Expressed_Genes_HSE_THP1_UV_Vs_HSE_THP1_GLI2 Rummagene Transcription Factor Associations 2026 1.0 null Lung adenocarcinoma_LUAD_TCGA-50-5932-11A-01R-1755-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Sarcoma_SARC_TCGA-DX-A3M2-01A-21R-A22K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MGA JASPAR Predicted Human Transcription Factor Targets 2025 1.0 29.9388 amygdalohippocampal transition zone, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.12589 H3K79me2_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-2K-A9WE-01A-11R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null interstitial nucleus of Cajal, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 2.88428 SW982 COSMIC Cell Line Gene Mutation Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-55-6979-11A-01R-1949-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCIH2141 CCLE Cell Line Gene Expression Profiles -1.0 -2.52706 496100547_HIP_no dementia_no TBI_82_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.03892 CtIP_DEPLETION_GDS2189_122_human_MCF10A mammary epithelial cells (MECs) GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4712-01A-01R-1503-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-56-8309-11A-01R-2296-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-KR-A7K8-01A-11R-A33J-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cuneate nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.24343 SNAI1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 23.3844 Prostate adenocarcinoma_PRAD_TCGA-XJ-A9DI-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null JUND-26020271-SMOOTH-MUSCLE-HUMAN ChEA Transcription Factor Targets 2022 1.0 null Adrenocortical carcinoma_ACC_TCGA-OR-A5LG-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ITFG2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.46308 DOK DepMap CRISPR Gene Dependency 1.0 2.39916 TP63-22573176-HFKS-HUMAN ChEA Transcription Factor Targets 2022 1.0 null GCNT2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.01919 Acute Myeloid Leukemia_LAML_TCGA-AB-2956-03A-01T-0740-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null lateral hypothalamic area, anterior region, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.67368 Lung squamous cell carcinoma_LUSC_TCGA-34-7107-11A-01R-1949-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MDAMB415 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -0.648001 Yaws DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.08 Lung squamous cell carcinoma_LUSC_TCGA-77-7142-11A-01R-2045-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null COV504 DepMap CRISPR Gene Dependency 1.0 2.99592 cochlear nuclei Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.842169 animal TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-33-4587-11A-01R-2125-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZBTB18 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 21.3986 SNU324 CCLE Cell Line Gene CNV Profiles -1.0 -1.77142 JHOS4 CCLE Cell Line Gene CNV Profiles 1.0 1.5074 caudal prosubiculum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.909665 GATA1-21571218-MEGAKARYOCYTES-HUMAN ChEA Transcription Factor Targets 2022 1.0 null inner CP in subgenual (subcallosal) cingulate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.51323 Lung adenocarcinoma_LUAD_TCGA-05-5420-01A-01R-1628-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TBX20 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 29.4315 SNUC1 CCLE Cell Line Gene Expression Profiles 1.0 1.46628 Prostate adenocarcinoma_PRAD_TCGA-EJ-7794-01A-11R-2118-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HCC827 DepMap CRISPR Gene Dependency 1.0 2.40928 MYC_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null U937 CCLE Cell Line Gene Expression Profiles 1.0 1.72401 testis_7d HPA Tissue Sample Gene Expression Profiles 1.0 1.32454 Bladder Urothelial Carcinoma_BLCA_TCGA-BT-A20O-01A-21R-A14Y-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cellular_component COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.098109 SMC3 ENCODE Transcription Factor Targets 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-58-8386-11A-01R-2296-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null EOMES JASPAR Predicted Human Transcription Factor Targets 2025 1.0 32.1388 SNU1214 CCLE Cell Line Gene Expression Profiles -1.0 -3.37633 nicotine dependence GWASdb SNP-Disease Associations 1.0 0.57331 KYSE-70 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.10381 lung GTEx Tissue Gene Expression Profiles 1.0 0.908131 AR-25329375-VCAP-HUMAN ChEA Transcription Factor Targets 2022 1.0 null Brain Lower Grade Glioma_LGG_TCGA-DU-A5TR-01A-11R-A28M-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Specific developmental disorder DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 0.505 I-II Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.00674 HEY2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.5485 GR-M Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.997543 GBX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.5807 internal male genital organ TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null temporal pole, right, superior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.40665 TP63-23658742-EP156T-HUMAN ChEA Transcription Factor Targets 2022 1.0 null HCC1011 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.03948 Head and Neck squamous cell carcinoma_HNSC_TCGA-CR-6487-01A-11R-1873-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null posteroventral (inferior) parietal cortex_1 yrs_F_12830 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.32603 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A45W-01A-11R-A24Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null pituitary GTEx Tissue Gene Expression Profiles -1.0 -2.10021 orbital frontal cortex_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.89046 facial nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -2.22598 Liver BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.05814 inferolateral temporal cortex (area TEv, area 20)_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.13528 ZNF75D JASPAR Predicted Human Transcription Factor Targets 2025 1.0 22.9165 496100484_FWM_no dementia_no TBI_86_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.04808 SG in lateral temporal-occipital cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 3.13342 CRO-AP3 COSMIC Cell Line Gene Mutation Profiles 1.0 null ventrolateral prefrontal cortex_16 pcw_M_12879 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.963432 LDHB CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.84392 Myelomonocytic leukemia cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.797 HOXD9 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.0772 IZ in primary auditory cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.09217 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4799-01A-01R-1305-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null KLE DepMap CRISPR Gene Dependency 1.0 3.04373 NCI-H292 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.70155 RUNX1 ChEA Transcription Factor Targets 1.0 null NCIH929 CCLE Cell Line Gene CNV Profiles -1.0 -1.72227 Kidney renal papillary cell carcinoma_KIRP_TCGA-B1-A656-01A-11R-A31O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung adenocarcinoma_LUAD_TCGA-91-6836-11A-01R-1858-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Platelet Mean Volume Determination (Procedure) DisGeNET Gene-Phenotype Associations 1.0 null COLO-668 COSMIC Cell Line Gene Mutation Profiles 1.0 null MPC1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.54159 primary somatosensory cortex (area S1, areas 3,1,2)_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.10239 testis_7b HPA Tissue Sample Gene Expression Profiles 1.0 1.09087 JUND ENCODE Transcription Factor Targets 1.0 null Prostate adenocarcinoma_PRAD_TCGA-YL-A9WJ-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null LS123 DepMap CRISPR Gene Dependency 1.0 2.78916 NCI-H1915 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.29578 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7433-01A-11R-2132-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PL4 DepMap CRISPR Gene Dependency 1.0 5.08139 GSE239688_4_v_0_canagliflozin_human RummaGEO Drug Perturbation Signatures 1.0 null ZNF414 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.12029 medial mammillary nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.90273 caudal portion of VFC (area 44) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.18812 whole body TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 GATA1-21571218-MEGAKARYOCYTES-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-91-6849-11A-01R-1949-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Pancreatic adenocarcinoma_PAAD_TCGA-IB-7651-01A-11R-2156-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Brain Lower Grade Glioma_LGG_TCGA-HW-A5KK-01A-11R-A27Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null b92 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.984 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-DS-A1OD-01A-11R-A14Y-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Prostate adenocarcinoma_PRAD_TCGA-SU-A7E7-01A-22R-A33R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CHAGOK1 CCLE Cell Line Gene CNV Profiles -1.0 -1.67584 SNU213 CCLE Cell Line Gene Expression Profiles -1.0 -2.19715 NB4 CCLE Cell Line Gene Expression Profiles 1.0 1.90607 parietal neocortex_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.6184 NCIH226 CCLE Cell Line Gene CNV Profiles -1.0 -1.49448 PMC10933434-44319_2024_69_MOESM2_ESM.xls-HRV16-UV_vs_MI-Associated_Gene_Name_MITF Rummagene Transcription Factor Associations 2026 1.0 null TBX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 26.2077 Skin Cutaneous Melanoma_SKCM_TCGA-FR-A44A-06A-11R-A24X-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null male reproductive system TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 NCIH292 CCLE Cell Line Gene CNV Profiles -1.0 -1.72489 Lung adenocarcinoma_LUAD_TCGA-73-4676-11A-01R-1755-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null RUNX1-22897851-JUKARTE6-1-HUMAN ChEA Transcription Factor Targets 2022 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-ER-A19P-06A-11R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BHY CCLE Cell Line Gene CNV Profiles 1.0 1.40529 Urinary system TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 1.0 1.039 hut102 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.291 PMC9013323-13577_2022_685_MOESM9_ESM.docx-12-AEBP1_AEBP1 Rummagene Transcription Factor Associations 2026 1.0 null Lung adenocarcinoma_LUAD_TCGA-50-5930-11A-01R-1755-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SOX4 MotifMap Predicted Transcription Factor Targets 1.0 null Prostate adenocarcinoma_PRAD_TCGA-EJ-8468-01A-21R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null EPOR CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.96372 HCC89 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.938527 PFSK1 DepMap CRISPR Gene Dependency 1.0 2.27094 CDX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 23.3923 inner CP in temporal polar cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.31257 Mesothelioma_MESO_TCGA-SH-A7BC-01A-11R-A34F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MTARC1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.92453 Brain Lower Grade Glioma_LGG_TCGA-DU-7006-01A-11R-2027-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null COLO-824 COSMIC Cell Line Gene Mutation Profiles 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-ER-A19S-06A-11R-A18U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-7068-01A-11R-2081-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cuneiform nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.823937 PMC12214745-41598_2025_95903_MOESM1_ESM.pdf-6-RORC_RORC Rummagene Transcription Factor Associations 2026 1.0 null spinal trigeminal nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.00809 GSE214931_2_v_5_temozolomide_human RummaGEO Drug Perturbation Signatures -1.0 null HCC33 CCLE Cell Line Gene Expression Profiles -1.0 -1.68267 urogenital system TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 Barr body COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.694 primary auditory cortex (core)_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -2.32687 Urogenital system TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 Disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.093 Head and Neck squamous cell carcinoma_HNSC_TCGA-CR-7376-01A-11R-2132-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null blood GTEx Tissue Gene Expression Profiles 1.0 1.88704 Bladder Urothelial Carcinoma_BLCA_TCGA-CF-A3MG-01A-11R-A20F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null IHH cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.581 NCI-H1435 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.988773 TLX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.2022 hsa-miR-4697-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 0.965816 TBX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 24.274 PRPF19 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.28571 GNG14 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.14554 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4354-01A-02R-1289-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CAPS CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.29796 HCC33 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.29589 posterior (caudal) superior temporal cortex (area 22c)_16 pcw_M_12287 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.28616 cellular_component GO Cellular Component Annotations 2015 1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2873-03A-01T-0735-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null paracentral lobule, posterior part, right, bank of cingulate sulcus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.15824 LAMB1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.35801 Endocrine gland TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 PSMD10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.66364 Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5988-01A-11R-1672-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Ventral pallidus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.16885 PMC12518476-10067_2025_7574_MOESM8_ESM.xlsx-Sheet1-Up_regulated_DEGs_of_KD_AR Rummagene Transcription Factor Associations 2026 1.0 null laterorostral part of entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.45683 Brain Lower Grade Glioma_LGG_TCGA-HT-7680-01A-11R-2256-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Prostate adenocarcinoma_PRAD_TCGA-KK-A7B0-01A-11R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MED10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.49974 SBF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.80218 PSN1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.859137 Adrenocortical carcinoma_ACC_TCGA-OR-A5J1-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null 496100483_FWM_possible Alzheimer's disease_TBI_100+_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 3.827 RGS11 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.21761 MEIS2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 29.4202 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A7CM-01A-11R-A33Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-BA-5557-01A-01R-1514-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-GU-A762-01A-11R-A33J-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null paraventricular nucleus of hypothalamus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.48598 HCC2302 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.10198 HCC2688 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.10381 pineal gland Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.846202 MDAMB453 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 1.17376 Male reproductive system TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 inner SZ in superolateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.857646 gland TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 PMC12751804-12916_2025_4527_MOESM1_ESM.xlsx-ST5-Supplementary_Table_5_MR_and_colocalization_results_shown_together_NR3C2 Rummagene Transcription Factor Associations 2026 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-ER-A19W-06A-41R-A239-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCI-H716 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.31056 RARA::RXRG JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.7771 rostral subdivision of paraventricular nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.07888 ACAA1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.29844 FAM86B2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.43507 NR3C2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.5613 PMC4196925-pone.0109760.s005.xlsx-Supp_Table_1_Genes_in_immune_mo-ETS2_mod_ETS2 Rummagene Transcription Factor Associations 2026 1.0 null HCC202 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.956188 Head and Neck squamous cell carcinoma_HNSC_TCGA-P3-A5Q5-01A-11R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GSE134375_3_v_2_stat3_human RummaGEO Gene Perturbation Signatures -1.0 null Brain stem TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 HMY-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.904545 Lung squamous cell carcinoma_LUSC_TCGA-43-6771-11A-01R-1820-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null raphe magnus nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.24522 DAUDI cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.599 ZNF667 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.5991 HCC1569 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.97853 Bladder Urothelial Carcinoma_BLCA_TCGA-GD-A6C6-01A-21R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null callosal sling Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.910122 496100340_TCx_possible Alzheimer's disease_no TBI_100+_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.90909 Attention deficit hyperactivity disorder DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 0.505 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-IR-A3LH-01A-21R-A213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null male reproductive gland TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 CCK81 DepMap CRISPR Gene Dependency 1.0 4.70376 KU1919 CCLE Cell Line Gene Expression Profiles -1.0 -1.547 H3K27ac_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null COLO 206F Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.00305 EFM-192C Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.955514 YY1 MotifMap Predicted Transcription Factor Targets 1.0 null Platelet distribution width GWAS Catalog SNP-Phenotype Associations 2025 1.0 1.1301 Rectum adenocarcinoma_READ_TCGA-CI-6621-01A-11R-1830-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GSE202434,GSE202438_12_v_14_talazoparib_human RummaGEO Drug Perturbation Signatures -1.0 null dorsal lateral geniculate nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.3089 SNU-484 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.914129 external granular (germinal) layer of lower rhombic lip Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.805 H3K36me3_CD14-positive monocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ZNF384 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 142.574 Pheochromocytoma and Paraganglioma_PCPG_TCGA-S7-A7WQ-01A-12R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Sarcoma_SARC_TCGA-QQ-A8VG-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GRANTA519 CCLE Cell Line Gene CNV Profiles -1.0 -1.45086 Liver hepatocellular carcinoma_LIHC_TCGA-DD-A1EG-01A-11R-A213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null central gray of the pons, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.33019 SNAI3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.2541 SMIM1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.67912 NCIH716 CCLE Cell Line Gene CNV Profiles -1.0 -1.5248 paracentral lobule, posterior part, left, lateral bank of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.03097 SIGM5 CCLE Cell Line Gene Expression Profiles 1.0 1.50458 NCI-H1648 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.8472 OSRC2 CCLE Cell Line Gene CNV Profiles 1.0 1.50649 Head and Neck squamous cell carcinoma_HNSC_TCGA-D6-6515-01A-21R-1873-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ELK1::HOXA1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.6049 H3118 DepMap CRISPR Gene Dependency 1.0 3.69831 MV411 CCLE Cell Line Gene Expression Profiles 1.0 1.65267 OVCA-420 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.232 SHMT1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.235 ERF::HOXB13 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 21.0275 PMC4026482-pone.0097702.s010.xlsx-LPS_1_8FC_12hour-Symbol_IRF6 Rummagene Transcription Factor Associations 2026 1.0 null amygdaloid complex_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.964566 superior colliculus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.05659 SALL4-22934838-CD34+-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null HSC39 DepMap CRISPR Gene Dependency 1.0 3.42114 Kidney renal papillary cell carcinoma_KIRP_TCGA-2Z-A9J5-01A-21R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MZ in orbital frontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.949744 YMB-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.29589 ETV2::HOXB13 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.3682 Kidney Chromophobe_KICH_TCGA-KO-8405-01A-11R-2315-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null transient Purkinje cell clusters Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.20488 496100620_FWM_possible Alzheimer's disease_no TBI_90-94_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.32907 SNU-398 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.10198 KP4 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.03948 TFAP2C JASPAR Predicted Transcription Factor Targets 1.0 null EVSA-T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.93393 Platelet Component Distribution Width Measurement DisGeNET Gene-Phenotype Associations 1.0 null Sarcoma_SARC_TCGA-DX-A6YZ-01A-12R-A355-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null DLX6 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 13.8658 CardiacMyocytes BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -2.22253 PRRX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.035 polymorphic layer of rostral subiculum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.25513 SP in granular insular cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.01095 reproductive system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null EFCAB6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.00577 Kidney renal papillary cell carcinoma_KIRP_TCGA-A4-7997-01A-11R-2204-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Uterine Carcinosarcoma_UCS_TCGA-N9-A4Q7-01A-11R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null upper (rostral) rhombic lip Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.09423 MOLM13 CCLE Cell Line Gene Expression Profiles 1.0 1.70491 SCRT1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.4022 Lung squamous cell carcinoma_LUSC_TCGA-22-5471-11A-01R-1635-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HSOS1 DepMap CRISPR Gene Dependency 1.0 3.65467 retina BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -0.858507 Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5879-01A-11R-1592-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null KNS-62 COSMIC Cell Line Gene Mutation Profiles 1.0 null FAM120B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.85166 medial habenular nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.7139 HS939-T COSMIC Cell Line Gene Mutation Profiles 1.0 null Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GS-A9TV-01A-11R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CD34+ BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -0.977389 CTCF_HeLa-S3_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null brain stem TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null SALL4-22934838-CD34+-HUMAN ChEA Transcription Factor Targets 2022 1.0 null Uterine Carcinosarcoma_UCS_TCGA-ND-A4WA-01A-12R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HCC1500 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.13605 hsa-miR-562 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.0155 EEF1AKMT3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.88869 H3K9me3_mononuclear cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H322T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.8439 HDAC2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null FOXC1 JASPAR Predicted Transcription Factor Targets 1.0 null PMC3644282-1471-2164-14-110-S3.xls-Contextual_Gene_Set_Ref_Can-ZNF205_ZNF205 Rummagene Transcription Factor Associations 2026 1.0 null reticular nucleus of thalamus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.836116 ZNF257 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 74.4837 lateral group of nuclei, right, dorsal division Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.890401 NCIH441 CCLE Cell Line Gene CNV Profiles -1.0 -2.30938 primary motor-sensory cortex (samples)_16 pcw_M_12879 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.928567 Dyggve-Melchior-Clausen disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.134 layer IIIu of area 35r Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.991024 vestibular nuclei, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.01387 planum polare, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.15431 ELK1::HOXB13 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.0665 CTCF_kidney epithelial cell_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CIB1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.38548 Cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.074 cell part LOCATE Predicted Protein Localization Annotations 1.0 null ventrolateral prefrontal cortex_12 pcw_F_12835 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.984197 tissues, cell types and enzyme sources TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 HES1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.4464 layer III of area 35c Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.28023 ISX JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.7653 hsa-miR-4720-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.07142 GSE152699,GSE152723_3_v_2_vemurafenib_human RummaGEO Drug Perturbation Signatures -1.0 null pedunculo(pontine) tegmental nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.17318 lateral habenular nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.61932 ETV1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 37.7201 LBP-1 MotifMap Predicted Transcription Factor Targets 1.0 null inferior olive, medial nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.853543 H3K9me3_HepG2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-Y8-A898-01A-11R-A355-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null temporal pole, right, medial aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.12798 CAL-85-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.61187 UACC893 DepMap CRISPR Gene Dependency 1.0 7.20838 mammillary body, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.19448 VMRCRCW CCLE Cell Line Gene CNV Profiles -1.0 -1.96266 NCI-H1975 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.904545 CTCF_endothelial cell of umbilical vein_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H2030 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.07461 alitretinoin_homo sapiens_gpl6480_gse43090 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null VAV2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.45258 SKRC20 CCLE Cell Line Gene Expression Profiles -1.0 -1.76641 Bladder Urothelial Carcinoma_BLCA_TCGA-DK-A3WY-01A-11R-A22U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Fer TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.022 NCIH854 CCLE Cell Line Gene CNV Profiles 1.0 1.81141 CTCF_B cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GSE186471_1_v_0_carnosol_human RummaGEO Drug Perturbation Signatures -1.0 null midbrain raphe nuclei Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.841681 hsa-miR-711 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.99187 PMC12659123-12864_2025_12285_MOESM12_ESM.xlsx-Table_S12-Table_S12_Differentially_expressed_genes_after_SPI1_knockdown_SPI1 Rummagene Transcription Factor Associations 2026 1.0 null ZBED6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.72652 posteroventral (inferior) parietal cortex_13 pcw_F_12834 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.50822 H3K9me3_endothelial cell of umbilical vein_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null ERF::FIGLA JASPAR Predicted Human Transcription Factor Targets 2025 1.0 39.0769 TBX5 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 37.9642 SUDHL8 CCLE Cell Line Gene CNV Profiles 1.0 1.93444 NAA40 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.71521 endocrine gland TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 RUNX1-21571218-MEGAKARYOCYTES-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null CTCF_K562_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-Y8-A8S1-01A-11R-A37K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CP in midlateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.83301 CTCF_lung_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5187-01A-01R-1426-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SNU668 CCLE Cell Line Gene Expression Profiles -1.0 -2.81845 TE1 CCLE Cell Line Gene Expression Profiles -1.0 -1.48647 ALX3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 13.3455 outer CP in primary visual cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.03341 SCC-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.70155 NCIH1373 CCLE Cell Line Gene CNV Profiles -1.0 -1.72207 G96 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.09401 H3K27me3_Mobilized CD34 Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null 496100548_HIP_no dementia_TBI_95-99_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.13353 enlarged kidney MGI Mouse Phenotype Associations 2023 1.0 null MAPKBP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.37815 TCCSUP CCLE Cell Line Gene Expression Profiles -1.0 -1.7048 RPMI7951 CCLE Cell Line Gene Expression Profiles 1.0 1.35588 CA4 field, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.942722 8305C CCLE Cell Line Gene CNV Profiles 1.0 1.45685 EN1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.1633 hsa-miR-4799-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.07142 Brain Lower Grade Glioma_LGG_TCGA-FG-6691-01A-11R-1896-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null WM983B CCLE Cell Line Gene CNV Profiles 1.0 1.65382 Skin Cutaneous Melanoma_SKCM_TCGA-ER-A2NH-06A-11R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCIH1869 CCLE Cell Line Gene CNV Profiles -1.0 -1.32021 Sarcoma_SARC_TCGA-QQ-A5VD-01A-21R-A32Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ABC-1 COSMIC Cell Line Gene CNV Profiles 1.0 2.93899 Lung squamous cell carcinoma_LUSC_TCGA-77-7138-11A-01R-2045-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2965-03A-01T-0734-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null amygdaloid complex_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.86279 Kidney Chromophobe_KICH_TCGA-KL-8332-01A-11R-2315-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null JVM3 DepMap CRISPR Gene Dependency 1.0 2.97833 ZNF410 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 29.5133 Sarcoma_SARC_TCGA-DX-A8BP-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-BD-A2L6-11A-21R-A213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCI-H1793 COSMIC Cell Line Gene Mutation Profiles 1.0 null ZNF416 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 21.3768 periaqueductal gray substance, dorsolateral portion Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.66915 RERF-LC-OK Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.997877 CTCF ENCODE Transcription Factor Targets 1.0 null Prostate adenocarcinoma_PRAD_TCGA-CH-5751-01A-11R-1580-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SW1271 COSMIC Cell Line Gene Mutation Profiles 1.0 null organelle LOCATE Predicted Protein Localization Annotations 1.0 null EXO5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.79295 Pheochromocytoma and Paraganglioma_PCPG_TCGA-S7-A7X2-01A-12R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ADAMTS7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.53493 HOP-92 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.836669 RUNX1-21571218-MEGAKARYOCYTES-HUMAN ChEA Transcription Factor Targets 2022 1.0 null plasma membrane LOCATE Predicted Protein Localization Annotations 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-ED-A5KG-01A-11R-A27V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MFE280 DepMap CRISPR Gene Dependency 1.0 4.82098 RETREG2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.51505 NOMO1 CCLE Cell Line Gene Expression Profiles 1.0 2.81134 496100480_HIP_no dementia_TBI_88_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.42001 H3K27me3_SK-N-SH_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null nervous system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null PHACTR2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.47187 LTBP3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.38235 H2AFZ_keratinocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Prostate adenocarcinoma_PRAD_TCGA-HC-7210-01A-11R-2118-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PrefrontalCortex BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.08936 TRIM33_KD_GDS4071_449_human_HMEC-TR mammary epithelial cell line GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null hindbrain TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null mediodorsal nucleus of thalamus_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.22213 JAK2_mutant_40_GSE11003 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations 1.0 1.8385 H3K9me3_H1-hESC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null THP-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.70155 CHAGO-K-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.70155 HMOX1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.4093 anterior (rostral) cingulate (medial prefrontal) cortex_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.93682 JUN_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null postcentral gyrus, right, inferior lateral aspect of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.965422 GSE152441,GSE152442_0_v_4_folic acid_human RummaGEO Drug Perturbation Signatures -1.0 null TBX18 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 42.5514 Brain Lower Grade Glioma_LGG_TCGA-RY-A847-01A-11R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Central nervous system TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 superior rostral gyrus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.40807 496100409_FWM_no dementia_TBI_85_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 3.6859 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-DG-A2KM-01A-11R-A180-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MKNK2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.89495 Skin Cutaneous Melanoma_SKCM_TCGA-D3-A3C8-06A-12R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Testis BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 1.55362 oculomotor nuclear complex, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.0219 PHOX2B JASPAR Predicted Human Transcription Factor Targets 2025 1.0 52.5173 PMC8020666-pnas.2015855118.sd09.xlsx-LPS_4_human_DRSG_higherRes-Ensemble_gene_id_IRF6 Rummagene Transcription Factor Associations 2026 1.0 null duodenum HPA Tissue Protein Expression Profiles 1.0 0.966326 Prostate adenocarcinoma_PRAD_TCGA-CH-5752-01A-11R-1580-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Prostate adenocarcinoma_PRAD_TCGA-HC-A6AN-01A-11R-A30B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null central nervous system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null SG in rostral entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.91876 Esophagus - Gastroesophageal Junction GTEx Tissue Gene Expression Profiles 2023 1.0 7.20123 HCC1428 CCLE Cell Line Gene CNV Profiles -1.0 -3.21049 Prostate adenocarcinoma_PRAD_TCGA-HC-7233-01A-11R-2118-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null chr20_1527355_A_G_b38 GTEx eQTL 2025 1.0 1.51135 CAL-148 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.951182 HCC1428 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.59353 male reproductive gland TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null head TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null GRN CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.95262 CDX4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.6315 subgranular zone of caudal dentate gyrus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.02979 orbital frontal cortex_18 yrs_M_12984 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.92163 precentral gyrus, right, superior lateral aspect of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.895102 BT549 CCLE Cell Line Gene Expression Profiles 1.0 1.84967 polymorphic layer of caudal subiculum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.01919 H2AFZ ENCODE Transcription Factor Targets 1.0 null striatum_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.35697 corpus callosum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.11994 Kidney TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 1.0 1.039 PANC0813 CCLE Cell Line Gene CNV Profiles -1.0 -1.82236 Lung adenocarcinoma_LUAD_TCGA-38-4632-11A-01R-1755-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null OVK18 CCLE Cell Line Gene Expression Profiles -1.0 -1.52414 female reproductive system TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 PDZD4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.76407 Liver hepatocellular carcinoma_LIHC_TCGA-DD-A1EC-01A-21R-A131-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_fibroblast of dermis_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SK-MEL-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.50879 XPO4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.81688 NCI-H1838 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.903139 ILVBL CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.04153 medulla oblongata TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null Prostate adenocarcinoma_PRAD_TCGA-HC-8266-01A-11R-2263-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null abducens nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.901162 Kidney renal papillary cell carcinoma_KIRP_TCGA-B1-5398-01A-02R-1592-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HCC1419 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -1.05064 CSB-26484114-CHIP-SEQ-FIBROBLAST-HUMAN ChEA Transcription Factor Targets 2022 1.0 null primary visual cortex (striate cortex, area V1/17)_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.12005 HCC1569 CCLE Cell Line Gene CNV Profiles 1.0 1.62897 CTCF_endothelial cell of umbilical vein_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null FXR MotifMap Predicted Transcription Factor Targets 1.0 null tissues, cell types and enzyme sources TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 chr20_1555750_C_T_b38 GTEx eQTL 2025 1.0 1.62894 PREP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.98091 GSE152699,GSE152723_3_v_1_vemurafenib_human RummaGEO Drug Perturbation Signatures -1.0 null Immunoglobulin-like domain InterPro Predicted Protein Domain Annotations 1.0 null anterior nucleus of pulvinar Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.26802 CHGB CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.34995 amygdaloid complex_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.938809 Kidney renal papillary cell carcinoma_KIRP_TCGA-IA-A83T-01A-11R-A355-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ventrolateral prefrontal cortex_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.20271 oe19 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.549 Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-G8-6326-01A-11R-2213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-FR-A7UA-06A-32R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SHISA2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.07408 DOK Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.908027 ZNF184 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 35.539 HSC3 DepMap CRISPR Gene Dependency 1.0 2.12331 caudal subdivision of medial nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.29315 phenotypic abnormality GWASdb SNP-Phenotype Associations 1.0 0.028232 VRK1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.22328 GSE185519_6_v_2_gilteritinib_human RummaGEO Drug Perturbation Signatures 1.0 null HCC2935 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.83046 mammillary body, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.828068 Brain Lower Grade Glioma_LGG_TCGA-HT-8110-01A-11R-2404-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GATA1 ChEA Transcription Factor Targets 1.0 null COLO 699 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.13605 Lung adenocarcinoma_LUAD_TCGA-49-4490-11A-01R-1858-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null primary auditory cortex (core)_13 pcw_F_12834 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -2.02949 ZNF317 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 29.421 G44 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.05264 TNFRSF25 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.28211 GSE120612_6_v_1_etoposide_human RummaGEO Drug Perturbation Signatures -1.0 null Kibra-Ex-Mer complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.889 Lung adenocarcinoma_LUAD_TCGA-55-6975-11A-01R-1949-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Sarcoma_SARC_TCGA-DX-A23V-01A-11R-A29R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MIXL1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 13.2643 Prostate adenocarcinoma_PRAD_TCGA-CH-5769-11A-01R-1580-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Pheochromocytoma and Paraganglioma_PCPG_TCGA-RM-A68W-01A-11R-A35K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PMC11426526-ppat.1012555.s014.xlsx-DEG_DC_C91-PL_LPS_vs_DC_Jurkat-DEG_MDDC_C91-PL_LPS_vs_MDDC_Jurkat_IRF6 Rummagene Transcription Factor Associations 2026 1.0 null ZNF558 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 81.0916 Brain Lower Grade Glioma_LGG_TCGA-DU-A7TD-01A-12R-A34F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MACIR CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.32669 BHY Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.997543 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EA-A3QD-01A-32R-A22U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Plateletcrit GWAS Catalog SNP-Phenotype Associations 2025 1.0 1.5 Head and Neck squamous cell carcinoma_HNSC_TCGA-CR-6481-01A-11R-1873-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BRCA1_DEPLETION_GDS3791_38_human_Hela GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null BXPC-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.91807 principal sensory nucleus of trigeminal nerve Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.35021 KG1C CCLE Cell Line Gene Expression Profiles 1.0 2.8466 outer CP in orbital frontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.06311 NKX2-4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 21.4584 496100515_HIP_dementia_TBI_90-94_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.07779 Immunoglobulin-like fold InterPro Predicted Protein Domain Annotations 1.0 null PMC11303399-41398_2024_3044_MOESM1_ESM.pdf-10-IRF8_IRF8 Rummagene Transcription Factor Associations 2026 1.0 null P31FUJ CCLE Cell Line Gene Expression Profiles 1.0 2.09697 MDAMB435S CCLE Cell Line Gene Expression Profiles 1.0 1.7722 Lung squamous cell carcinoma_LUSC_TCGA-90-7767-11A-01R-2125-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null IST-MEL1 COSMIC Cell Line Gene Mutation Profiles 1.0 null disease GWASdb SNP-Disease Associations 1.0 0.023925 ZNF354A JASPAR Predicted Human Transcription Factor Targets 2025 1.0 79.8078 Lung adenocarcinoma_LUAD_TCGA-L4-A4E6-01A-11R-A24H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Pheochromocytoma and Paraganglioma_PCPG_TCGA-W2-A7HE-01A-11R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null brain TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null Gland TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 posteroventral (inferior) parietal cortex_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.921694 Liver hepatocellular carcinoma_LIHC_TCGA-GJ-A3OU-01A-31R-A38B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ARIH1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.17187 Lung squamous cell carcinoma_LUSC_TCGA-43-6773-11A-01R-1949-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null 496100642_PCx_possible Alzheimer's disease_TBI_90-94_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.39102 Lung squamous cell carcinoma_LUSC_TCGA-56-8201-11A-01R-2247-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GSE196117_1_v_8_clarithromycin_human RummaGEO Drug Perturbation Signatures 1.0 null TP63 ChEA Transcription Factor Targets 1.0 null SG in dorsolateral prefrontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -2.08097 Lung squamous cell carcinoma_LUSC_TCGA-56-8083-11A-01R-2247-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PMC4858740-ncomms11473-s2.xls-HAdV-D9_Cr1b_Library_2-Hit_name_CENPX Rummagene Transcription Factor Associations 2026 1.0 null Gonad TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 CLN3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.05811 JUN_01_172 KnockTF Gene Expression Profiles with Transcription Factor Perturbations 1.0 1.17102 CP in caudal hippocampus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.3462 OSC-19 COSMIC Cell Line Gene CNV Profiles 1.0 2.93899 tissues, cell types and enzyme sources TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null JUND_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-BT-A3PH-01A-11R-A220-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null VZ in dorsomedial parietal cortex (area 7m) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.871513 SALL4 ChEA Transcription Factor Targets 1.0 null Prostate adenocarcinoma_PRAD_TCGA-EJ-5503-01A-01R-1580-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Medulla oblongata TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 Liver hepatocellular carcinoma_LIHC_TCGA-2V-A95S-01A-11R-A37K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null posterior group of nuclei, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.916049 Mitotic spindle pole COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.589 inferior olivary complex, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.21167 Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5096-01A-01R-1420-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_K562_hg19_7 ENCODE Transcription Factor Binding Site Profiles 1.0 null 721_B_lymphoblasts BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -0.832689 SG in granular insular cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.45234 SG in posterior frontal cortex (motor cortex) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.41176 central medullary reticular group, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.89253 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A6JZ-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GSE178267_2_v_0_vemurafenib_human RummaGEO Drug Perturbation Signatures -1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4176-01A-02R-1289-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TBXT JASPAR Predicted Human Transcription Factor Targets 2025 1.0 36.0612 Adrenocortical carcinoma_ACC_TCGA-OR-A5K2-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null caudal presubiculum (postsubiculum) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.871135 inferior colliculus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.64332 Lung squamous cell carcinoma_LUSC_TCGA-85-7710-11A-01R-2125-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hsa-miR-4488 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.921135 Disease DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 0.505 Testis TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 EFO-27 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.05088 PMC4026482-pone.0097702.s010.xlsx-LPS_1_8FC_24hour-Symbol_IRF6 Rummagene Transcription Factor Associations 2026 1.0 null 496100472_PCx_possible Alzheimer's disease_TBI_100+_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.22103 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-VS-A94Z-01A-11R-A38B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HCC2998 DepMap CRISPR Gene Dependency 1.0 2.27968 COLO680N CCLE Cell Line Gene Expression Profiles -1.0 -1.54959 transverse gyri, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.978556 928 MEL Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.904545 GSE152441,GSE152442_1_v_5_folic acid_human RummaGEO Drug Perturbation Signatures 1.0 null testis_7f HPA Tissue Sample Gene Expression Profiles 1.0 1.3131 Kidney renal clear cell carcinoma_KIRC_TCGA-A3-3378-01A-02R-1325-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Reproductive system TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 postcentral gyrus, right, bank of the posterior central sulcus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.44849 A-Netherlands-602-2009(H1N1)_12Hour_None_GSE40844 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.52416 KARPAS-1106P Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.860311 TP63-22573176-HFKS-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null orbital frontal cortex_13 pcw_F_12834 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.16724 Lung squamous cell carcinoma_LUSC_TCGA-51-4081-11A-01R-1758-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null 19139136-TableS3 GeneSigDB Published Gene Signatures 1.0 null TBR1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 32.2056 tretinoin_homo sapiens_gpl6244_gds4180 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-CW-6090-01A-11R-1672-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Birk-Barel syndrome DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.129 RAB5C CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.18609 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5198-01A-01R-1426-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null posterior (caudal) superior temporal cortex (area 22c)_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.849157 TIPARP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.45461 AVPI1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.80393 MZ in posteroventral (inferior) parietal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.967403 Sarcoma_SARC_TCGA-VT-A80J-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SIX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.5108 Brain Lower Grade Glioma_LGG_TCGA-FG-A4MU-01B-11R-A28M-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCI-H2171 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.990345 H3K9me3_NT2-D1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null striatum_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.972964 Liver hepatocellular carcinoma_LIHC_TCGA-MR-A8JO-01A-12R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6938-01A-11R-1915-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PMC3419980-leu201249x2.xls-RUNX1-ETO_siRE_ChIPSeq_peaks_ge-gene_name_RUNX1 Rummagene Transcription Factor Associations 2026 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-BD-A3EP-11A-12R-A22L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Sarcoma_SARC_TCGA-UE-A6QT-01A-12R-A32Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Brain Lower Grade Glioma_LGG_TCGA-HW-A5KM-01A-11R-A27Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ABC1 CCLE Cell Line Gene CNV Profiles 1.0 3.26358 substantia nigra, pars reticulata, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.42459 paracentral lobule, anterior part, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.46403 Lung adenocarcinoma_LUAD_TCGA-55-7728-01A-11R-2187-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-43-6647-11A-01R-1820-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CRBN CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.40974 RT-112 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.05088 NCI-H1666 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.17636 hsa-miR-4635 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.55165 layer V of area 35c Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.889093 Immunoglobulin V-set domain InterPro Predicted Protein Domain Annotations 1.0 null LS DepMap CRISPR Gene Dependency 1.0 2.28266 FBXO27 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.90672 primary visual cortex (striate cortex, area V1/17)_18 yrs_M_12984 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.13908 Lung adenocarcinoma_LUAD_TCGA-50-5939-11A-01R-1628-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null IGLON5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.44853 GSE163275_1_v_0_irf8_human RummaGEO Gene Perturbation Signatures -1.0 null Lung adenocarcinoma_LUAD_TCGA-44-5645-11A-01R-1628-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null FLYWCH2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.98809 superior frontal gyrus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.847412 dorsal motor nucleus of the vagus (vagal nucleus) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.41469 TBX19 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 26.5489 dorsolateral prefrontal cortex_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.51322 IZ in caudal midinferior temporal cortex (area TF) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.96638 Lassa Fever Virus_8hr_24069471_GSE41300 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.7957 SCH DepMap CRISPR Gene Dependency 1.0 3.84969 Thyroid BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -0.830382 PL21 CCLE Cell Line Gene Expression Profiles 1.0 1.61662 basomedial nucleus (accessory basal nucleus) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.881889 Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-A6V1-01A-12R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZSCAN9 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.80728 cerebellar cortex_17 pcw_F_12880 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.13443 Lung adenocarcinoma_LUAD_TCGA-44-6778-11A-01R-1858-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SK-MES-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.893297 MFE296 DepMap CRISPR Gene Dependency 1.0 8.03692 Skin Cutaneous Melanoma_SKCM_TCGA-D3-A2JH-06A-11R-A18T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HCC1319 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.10198 NCIH650 CCLE Cell Line Gene CNV Profiles -1.0 -2.18996 GTL-16 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.13605 HSC4 DepMap CRISPR Gene Dependency 1.0 2.82799 inferolateral temporal cortex (area TEv, area 20)_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.53794 U-937 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.4613 Acute Myeloid Leukemia_LAML_TCGA-AB-2833-03A-01T-0734-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Edinger-Westphal nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 2.07052 hippocampus (hippocampal formation)_24 pcw_M_12288 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.09108 indusium griseum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.5073 fastigial nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.23036 Lung adenocarcinoma_LUAD_TCGA-49-6745-11A-01R-1858-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null 496100362_FWM_no dementia_no TBI_78_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 3.13524 FAM167B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.50122 orbital frontal cortex_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.20414 outer CP in caudal perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.91206 GRM CCLE Cell Line Gene CNV Profiles 1.0 1.52391 gonad TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 L33 CCLE Cell Line Gene Expression Profiles -1.0 -2.22514 SNU-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.28017 NCI-H596 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.03883 orbital frontal cortex_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 3.30679 DGKE CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.3781 disease of mental health GWASdb SNP-Disease Associations 1.0 0.042956 PL-21 COSMIC Cell Line Gene Mutation Profiles 1.0 null ventrolateral prefrontal cortex_17 pcw_F_12880 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.09371 posterior hypothalamic nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.56062 Immunoglobulin subtype InterPro Predicted Protein Domain Annotations 1.0 null primary visual cortex (striate cortex, area V1/17)_17 pcw_F_12880 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.05406 Kidney Chromophobe_KICH_TCGA-KN-8425-01A-11R-2315-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null RAD21_HCT116_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null PMC8020666-pnas.2015855118.sd09.xlsx-LPS_4_human_DRSG_higherRes-Hg_gene_id_IRF6 Rummagene Transcription Factor Associations 2026 1.0 null GLI3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 36.6018 lateral tuberal nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.50242 CTCF_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null YD15 CCLE Cell Line Gene Expression Profiles -1.0 -1.62403 DAZAP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.89667 EMX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.3951 SG in caudal entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.05595 membrane LOCATE Predicted Protein Localization Annotations 1.0 null OVCA 420 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.997543 primary auditory cortex (core)_18 yrs_M_12984 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.1743 DETROIT 562 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.997877 ventrolateral prefrontal cortex_37 yrs_M_12303 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.887656 Lung squamous cell carcinoma_LUSC_TCGA-43-7657-11A-01R-2125-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cytoplasmic part LOCATE Predicted Protein Localization Annotations 1.0 null ZNF140 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 40.0386 GSE228106_0_v_2_paclitaxel_human RummaGEO Drug Perturbation Signatures 1.0 null ETV2::FIGLA JASPAR Predicted Human Transcription Factor Targets 2025 1.0 39.8174 Prostate adenocarcinoma_PRAD_TCGA-HC-7079-01A-11R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null DB Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.82594 NCI-H889 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.852443 SU-DHL-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.36224 outer CP in inferolateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.972255 NTAQ1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.54537 U937 CCLE Cell Line Gene CNV Profiles 1.0 1.56763 Endometrial stromal tumor DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.21 gland TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null anterior orbital gyrus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.910388 LCK CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.67369 HCV JFH1_96Hour-Huh7_5_1c2_None_GSE29889 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.22857 hippocampus (hippocampal formation)_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.40259 outer CP in subgenual (subcallosal) cingulate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.88661 496100385_TCx_dementia_no TBI_84_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 3.38352 BCPAP CCLE Cell Line Gene Expression Profiles 1.0 1.51074 Lung adenocarcinoma_LUAD_TCGA-55-6983-11A-01R-1949-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null female reproductive system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null JL-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.05428 reuniens nucleus (medioventral nucleus) of thalamus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.01523 hippocampus (hippocampal formation)_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.889843 primary auditory cortex (core)_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.83901 OCIAML2 CCLE Cell Line Gene Expression Profiles 1.0 2.06314 Sarcoma_SARC_TCGA-X6-A8C3-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Brain Lower Grade Glioma_LGG_TCGA-E1-A7YN-01A-11R-A34F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null gallbladder HPA Tissue Protein Expression Profiles 1.0 0.966326 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5178-01A-01R-1426-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null central nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.2703 stratum lacunosum-moleculare of rostral CA1 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.50233 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-ZJ-A8QR-01A-11R-A37O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Disease of mental health DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 0.505 MDA-MB-330 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.997877 HUO9 DepMap CRISPR Gene Dependency 1.0 2.32536 Acute Myeloid Leukemia_LAML_TCGA-AB-2969-03A-01T-0734-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Brain Lower Grade Glioma_LGG_TCGA-E1-5303-01A-01R-1470-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null female reproductive gland TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 H3K27me3_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MZ in midcingulate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.92206 Bladder Urothelial Carcinoma_BLCA_TCGA-K4-A5RJ-01A-11R-A28M-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-SX-A7SM-01A-11R-A355-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TestisSeminiferousTubule BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 1.16315 IM95 DepMap CRISPR Gene Dependency 1.0 6.79851 Lung squamous cell carcinoma_LUSC_TCGA-22-5478-11A-11R-1635-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PKNOX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 26.4734 primary motor cortex (area M1, area 4)_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 2.43702 DANG CCLE Cell Line Gene Expression Profiles 1.0 1.37841 ZNFX1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.19589 Prostate adenocarcinoma_PRAD_TCGA-CH-5738-01A-11R-1580-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null posteroventral (inferior) parietal cortex_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.32599 ESS1 CCLE Cell Line Gene Expression Profiles 1.0 1.46894 GSE223609,GSE223610_0_v_2_kdm6a_human RummaGEO Gene Perturbation Signatures -1.0 null Lung adenocarcinoma_LUAD_TCGA-38-4626-11A-01R-1758-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null RD CCLE Cell Line Gene Expression Profiles -1.0 -2.33509 RBMS2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.59716 RCM-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.17574 Organ system cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.043 HCC1500 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -0.913665 Lung squamous cell carcinoma_LUSC_TCGA-22-4593-11A-01R-1820-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null superior occipital gyrus, right, inferior bank of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.02397 PAX3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 30.061 EFM-19 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.10381 Pancreatic adenocarcinoma_PAAD_TCGA-HZ-A4BK-01A-11R-A26U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MOB1B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.1121 cingulum bundle, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.8878 RARA::RXRA JASPAR Predicted Human Transcription Factor Targets 2025 1.0 36.2609 cerebellar cortex_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.858005 Lung squamous cell carcinoma_LUSC_TCGA-56-7730-11A-01R-2125-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-ER-A19O-06A-11R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null DLX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 13.4372 hypoglossal nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.54881 CEBPB ENCODE Transcription Factor Targets 1.0 null HOXB2::ELK1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.8044 posterior (caudal) superior temporal cortex (area 22c)_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.17983 CTCF_A549_hg19_9 ENCODE Transcription Factor Binding Site Profiles 1.0 null GSE152441,GSE152442_6_v_4_folic acid_human RummaGEO Drug Perturbation Signatures -1.0 null L33 DepMap CRISPR Gene Dependency 1.0 3.506 inferolateral temporal cortex (area TEv, area 20)_18 yrs_M_12984 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.72013 MYC ENCODE Transcription Factor Targets 1.0 null GSE172458_0_v_1_cisplatin_human RummaGEO Drug Perturbation Signatures 1.0 null HT1197 CCLE Cell Line Gene CNV Profiles 1.0 2.09134 FAM72B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.71919 CTCF_spleen_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null UNCX JASPAR Predicted Human Transcription Factor Targets 2025 1.0 13.2945 KIF20A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.53773 interpositus (intermediate) nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.830541 Lung adenocarcinoma_LUAD_TCGA-44-6145-11A-01R-1858-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null RCM1 DepMap CRISPR Gene Dependency 1.0 4.70508 Nrd1 complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.565 DNPH1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.93831 SP in dorsomedial frontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.00939 RKN CCLE Cell Line Gene Expression Profiles 1.0 2.40952 UPCISCC029A DepMap CRISPR Gene Dependency 1.0 3.09883 KYSE520 CCLE Cell Line Gene CNV Profiles 1.0 1.92265 MYC_KD_GSE22139_685_human_medulloblastoma GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null Sarcoma_SARC_TCGA-DX-A3U6-01A-11R-A29R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Pheochromocytoma and Paraganglioma_PCPG_TCGA-SR-A6MZ-01A-11R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4699-01A-01R-1277-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null T-cell lymphoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.903 Lung squamous cell carcinoma_LUSC_TCGA-77-8007-11A-01R-2187-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null frontal pole, right, superior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.06348 Lung squamous cell carcinoma_LUSC_TCGA-51-4080-11A-01R-1758-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null RMGI DepMap CRISPR Gene Dependency 1.0 2.23609 PMC4269325-NIHMS634665-supplement-supp_table4.xls-H3K27me3_TRIM37_KD-Unnamed_2_AR Rummagene Transcription Factor Associations 2026 1.0 null SNU1076 CCLE Cell Line Gene CNV Profiles 1.0 2.50624 Lung squamous cell carcinoma_LUSC_TCGA-39-5040-11A-01R-2125-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Rat-2 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.55 OKAJIMA Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.955514 ONECUT3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 60.8772 basomedial nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.945818 MRC2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.47498 HCC1937 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 2.3445 TBX15 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 49.8476 COV504 CCLE Cell Line Gene Expression Profiles -1.0 -1.50494 Bladder Urothelial Carcinoma_BLCA_TCGA-2F-A9KQ-01A-11R-A38B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ELF1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 39.1073 RMGI CCLE Cell Line Gene Expression Profiles 1.0 1.62191 Prostate adenocarcinoma_PRAD_TCGA-EJ-5508-01A-02R-1580-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null OTX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.7768 female reproductive gland TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null paraterminal gyrus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.85298 DMS454 CCLE Cell Line Gene CNV Profiles 1.0 1.8784 SG in midlateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.27099 8305C CCLE Cell Line Gene Expression Profiles 1.0 2.25298 RH18 CCLE Cell Line Gene Expression Profiles -1.0 -1.46551 placenta HPA Tissue Protein Expression Profiles 1.0 0.966326 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7097-01A-11R-2016-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B2-4098-01A-02R-1325-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hsa-miR-320e TargetScan Predicted Nonconserved microRNA Targets 1.0 0.843347 Pheochromocytoma and Paraganglioma_PCPG_TCGA-S7-A7WX-01A-11R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung adenocarcinoma_LUAD_TCGA-91-6829-11A-01R-1858-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCIH3255 CCLE Cell Line Gene Expression Profiles -1.0 -1.55666 SKBR3 CCLE Cell Line Gene CNV Profiles 1.0 1.35149 RAD21_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null STAT3 MotifMap Predicted Transcription Factor Targets 1.0 null GSE94849_6_v_2_pinometostat_human RummaGEO Drug Perturbation Signatures -1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5894-01A-11R-1592-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BHLHE41 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.2603 substantia innominata, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.00578 Skin Cutaneous Melanoma_SKCM_TCGA-D3-A51F-06A-11R-A266-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-DA-A1IB-06A-11R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PMC4498179-srep11671-s1.pdf-178-PRDM5_PRDM5 Rummagene Transcription Factor Associations 2026 1.0 null hsa-miR-4726-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.07142 LC1SQ DepMap CRISPR Gene Dependency 1.0 4.15122 NCIH322 CCLE Cell Line Gene CNV Profiles -1.0 -1.90796 PMC12019518-ao5c02459_si_002.xlsx-Table_S3-Table_S3_Screening_of_genes_that_are_commonly_upregulated_in_cells_on_stiff_substrate_and_down-regulated_by_KD_of_UBE2A_B_AR Rummagene Transcription Factor Associations 2026 1.0 null Lymphoma_burkitts(Raji) BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.9282 HPAF-II Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.61187 ARC complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.59 PPIH CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.89792 Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-5679-01A-11R-1541-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null LRCH4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.26642 KYSE-520 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.10381 Urinary tract TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 1.0 1.039 HCC4006 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.988773 vacuole LOCATE Predicted Protein Localization Annotations 1.0 null FGFR3_knockdown_174_GSE41035 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -1.86761 Brain Lower Grade Glioma_LGG_TCGA-S9-A6U0-01A-12R-A32Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-DD-A1EE-11A-11R-A131-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null subgenual (subcallosal) division of MFC (area 25) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.32076 KYSE220 DepMap CRISPR Gene Dependency 1.0 2.32461 Lung squamous cell carcinoma_LUSC_TCGA-22-5489-11A-01R-1635-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null 496100338_HIP_probable Alzheimer's disease_no TBI_79_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.31908 PMC7786291-Table_1.xlsx-Table_S1-Supplementary_table_1_ETV7-related_genes_in_the_TCGA_SKCM_data_set_ETV7 Rummagene Transcription Factor Associations 2026 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5169-01A-01R-1426-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SUIT2 CCLE Cell Line Gene CNV Profiles -1.0 -1.48384 Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2M8-06A-12R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZNF341 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.0069 TTC1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.35869 Female reproductive system TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 membrane-bounded organelle LOCATE Predicted Protein Localization Annotations 1.0 null 496100287_TCx_no dementia_TBI_90-94_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.07096 amygdaloid complex_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -2.32879 Lung adenocarcinoma_LUAD_TCGA-44-6146-11A-01R-1858-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PSS008 DepMap CRISPR Gene Dependency 1.0 2.44088 hippocampus (hippocampal formation)_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.917267 CEBPB_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null abnormal kidney morphology MGI Mouse Phenotype Associations 2023 1.0 null Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A70G-01B-11R-A35K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney Failure, Chronic HuGE Navigator Gene-Phenotype Associations 1.0 null HEC59 CCLE Cell Line Gene CNV Profiles -1.0 -1.37556 substance dependence GWASdb SNP-Disease Associations 1.0 0.218383 Skin Cutaneous Melanoma_SKCM_TCGA-HR-A2OH-06A-11R-A18U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Internal male genital organ TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 lateral habenular nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 2.32979 lytic vacuole LOCATE Predicted Protein Localization Annotations 1.0 null Lung adenocarcinoma_LUAD_TCGA-35-4122-01A-01R-1107-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GSE159678_4_v_3_chloroquine_human RummaGEO Drug Perturbation Signatures 1.0 null endocrine gland TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null HCC1954 CCLE Cell Line Gene CNV Profiles 1.0 1.42945 orbital frontal cortex_8 pcw_M_13058 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.41948 SKMEL3 CCLE Cell Line Gene CNV Profiles 1.0 1.61915 lysosome LOCATE Predicted Protein Localization Annotations 1.0 null CTCF_cardiac fibroblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null DBTRG05MG DepMap CRISPR Gene Dependency 1.0 2.22989 RH18 CCLE Cell Line Gene CNV Profiles 1.0 1.3803 GSE217776,GSE217829_2_v_6_sgf29_human RummaGEO Gene Perturbation Signatures 1.0 null posteroventral (inferior) parietal cortex_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.26425 CTCF_kidney epithelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MONOMAC1 CCLE Cell Line Gene Expression Profiles 1.0 1.63698 Pancreatic adenocarcinoma_PAAD_TCGA-HZ-8003-01A-21R-2204-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null intracellular membrane-bounded organelle LOCATE Predicted Protein Localization Annotations 1.0 null SUM1315MO2 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.749516 Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4816-01A-01R-1503-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Head TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 NR3C1-27076634-BEAS2B-HUMAN-LUNG-INFLAMMATION ChEA Transcription Factor Targets 2022 1.0 null H3K27me3_Breast Myoepithelial Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null G292CLONEA141B1 CCLE Cell Line Gene Expression Profiles -1.0 -2.06956 Liver hepatocellular carcinoma_LIHC_TCGA-BC-A10Y-11A-11R-A131-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HAND2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.7473 Lung adenocarcinoma_LUAD_TCGA-44-2668-11A-01R-1758-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ANKRD13A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.59421 NCIH2887 DepMap CRISPR Gene Dependency 1.0 2.30529 KYSE-140 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.997877 Kidney renal clear cell carcinoma_KIRC_TCGA-A3-3319-01A-02R-1325-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-DD-A4NH-01A-11R-A27V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null 496100497_FWM_no dementia_TBI_95-99_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.69599 SNU-216 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.362 Liver hepatocellular carcinoma_LIHC_TCGA-DD-A39V-01A-11R-A213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HDAC2 ENCODE Transcription Factor Targets 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-R2-A69V-01A-11R-A32P-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-BB-7861-01A-11R-2232-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4338-01A-01R-1289-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null occipital neocortex_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.9084 SP in perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.843434 Adrenocortical carcinoma_ACC_TCGA-OR-A5J8-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null reproductive system TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 TERF1 Pathway Commons Protein-Protein Interactions 1.0 null Adrenocortical carcinoma_ACC_TCGA-OR-A5KT-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung adenocarcinoma_LUAD_TCGA-38-4625-11A-01R-1758-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hsa-miR-4270 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.0155 Disease of anatomical entity DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.042 CTCF_GM13977_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K9me3_fibroblast of lung_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null rostral subdivision of medial nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.00717 ARAF CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.26561 Lung squamous cell carcinoma_LUSC_TCGA-60-2709-11A-01R-1820-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null gracile nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.57651 Mesothelioma_MESO_TCGA-LK-A4O4-01A-11R-A34F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2932-03A-01T-0740-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ETV6 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.0849 Prostate adenocarcinoma_PRAD_TCGA-KK-A8I8-01A-11R-A36G-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null dorsolateral prefrontal cortex_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.53274 CTCF_epithelial cell of proximal tubule_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-49-4512-11A-01R-1858-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Myelencephalon TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 NCI-H2030 COSMIC Cell Line Gene Mutation Profiles 1.0 null anterior (rostral) cingulate (medial prefrontal) cortex_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.11309 cerebellar cortex_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.86958 Head and Neck squamous cell carcinoma_HNSC_TCGA-T2-A6WZ-01A-21R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ventral posterior medial nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.30123 HCC4011 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.893297 Lung squamous cell carcinoma_LUSC_TCGA-56-7222-11A-01R-2045-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZR75B Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -1.38269 testis_7a HPA Tissue Sample Gene Expression Profiles 1.0 1.27357 Brain Lower Grade Glioma_LGG_TCGA-DU-8161-01A-11R-2256-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5462-01A-01R-1503-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null THP1 CCLE Cell Line Gene Expression Profiles 1.0 1.98898 posterior (caudal) superior temporal cortex (area 22c)_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.04888 ZNF853 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.47111 Hindbrain TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 all GWASdb SNP-Phenotype Associations 1.0 0.028214 granular layer of rostral dentate gyrus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.935048 Kidney renal papillary cell carcinoma_KIRP_TCGA-4A-A93Y-01A-11R-A37K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null internal male genital organ TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 inferolateral temporal cortex (area TEv, area 20)_21 pcw_M_12886 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.05303 KYSE-520 COSMIC Cell Line Gene CNV Profiles 1.0 2.93899 Lung adenocarcinoma_LUAD_TCGA-44-3396-11A-01R-1758-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CP66-MEL COSMIC Cell Line Gene Mutation Profiles 1.0 null HCC38 CCLE Cell Line Gene CNV Profiles 1.0 2.33451 Lung squamous cell carcinoma_LUSC_TCGA-22-5482-11A-01R-1635-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PPARG CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.83096 OVCA-429 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.191 PTK7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.95954 cingulum bundle, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.98401 Sarcoma_SARC_TCGA-K1-A6RT-01A-32R-A33J-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ventromedial hypothalamic nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.854412 Prostate adenocarcinoma_PRAD_TCGA-KK-A59V-01A-11R-A29R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null substance-related disorder GWASdb SNP-Disease Associations 1.0 0.130199 SW837 CCLE Cell Line Gene CNV Profiles -1.0 -1.32079 Lung adenocarcinoma_LUAD_TCGA-44-6777-11A-01R-1858-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Pancreatic adenocarcinoma_PAAD_TCGA-H6-A45N-11A-12R-A26U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null posteroventral (inferior) parietal cortex_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.2544 icSARA deltaORF6_7Hour_23365422_GSE33267 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.84958 R3HDM1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.68173 FECH CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.81011 Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A43P-01A-31R-A23W-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CR-7382-01A-11R-2132-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Brain Lower Grade Glioma_LGG_TCGA-HT-7676-01A-11R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null testis TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null IZ in primary visual cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.859599 EZH2_keratinocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null subcallosal cingulate gyrus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.03574 C3A CCLE Cell Line Gene CNV Profiles 1.0 1.37 HES2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.2797 CTCF_HepG2_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CR-7395-01A-11R-2016-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null KS1 CCLE Cell Line Gene CNV Profiles -1.0 -1.32859 Rectum adenocarcinoma_READ_TCGA-F5-6702-01A-11R-1830-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null RAX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 13.2769 TestisLeydigCell BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 1.0516 frontal pole, right, inferior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -2.02385 Lung adenocarcinoma_LUAD_TCGA-95-7043-01A-11R-1949-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null dorsolateral prefrontal cortex_23 yrs_M_12300 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.03171 urinary bladder HPA Tissue Gene Expression Profiles 1.0 0.866821 PROP1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 42.4557 COLO-783 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.904545 hsa-miR-4441 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.0155 SKN3 DepMap CRISPR Gene Dependency 1.0 3.63347 HS766T CCLE Cell Line Gene Expression Profiles 1.0 1.5367 NCI-H522 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.11422 MTRES1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.07783 RAD21_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Male reproductive gland TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 substantia nigra, pars compacta, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.15017 OCILY18 DepMap CRISPR Gene Dependency 1.0 2.6002 Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-5327-01A-01R-1686-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null myelencephalon TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null Prostate adenocarcinoma_PRAD_TCGA-J9-A52B-01A-11R-A26U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-43-3394-11A-01R-1758-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Solid cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.874 RAD21_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NFE2L2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.44222 NCI-H1694 COSMIC Cell Line Gene Mutation Profiles 1.0 null cellular_component LOCATE Predicted Protein Localization Annotations 1.0 null KYAE1 DepMap CRISPR Gene Dependency 1.0 9.25928 GSE202434,GSE202438_7_v_14_talazoparib_human RummaGEO Drug Perturbation Signatures -1.0 null gonad TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null SG in inferolateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.64362 NCCMPNST1C1 DepMap CRISPR Gene Dependency 1.0 2.12266 dorsolateral prefrontal cortex_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.28151 extracellular region GO Cellular Component Annotations 2015 1.0 null PANC1 CCLE Cell Line Gene Expression Profiles 1.0 1.41867 Adult T-cell lymphoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.994 ONS-76 COSMIC Cell Line Gene Mutation Profiles 1.0 null GSE172189_0_v_1_venetoclax_human RummaGEO Drug Perturbation Signatures 1.0 null PPARA::RXRA JASPAR Predicted Human Transcription Factor Targets 2025 1.0 24.9327 CALU-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.892649 Prostate adenocarcinoma_PRAD_TCGA-HC-7231-01A-11R-2118-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-HE-7128-01A-11R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null whole body TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null M07E DepMap CRISPR Gene Dependency 1.0 4.73588 CTCF_HepG2_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null spinal (inferior) vestibular nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.30989 HOXD12::ELK1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.006 Whole body TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 CJUN-26792858-CHIP-SEQ-BT549-HUMAN ChEA Transcription Factor Targets 2022 1.0 null NKX2-5 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.5652 POLR2AphosphoS5_HL-60_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GSE228106_3_v_2_paclitaxel_human RummaGEO Drug Perturbation Signatures 1.0 null H3K36me3_Peripheral Blood Mononuclear Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-43-7658-11A-01R-2125-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2981-03B-01T-0748-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null bone marrow HPA Tissue Gene Expression Profiles 1.0 0.918354 ETV7 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 23.9136 LUDLU1 CCLE Cell Line Gene CNV Profiles 1.0 1.77508 Skin Cutaneous Melanoma_SKCM_TCGA-DA-A3F2-06A-11R-A20F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cochlear nuclei, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -2.1838 CTCF_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MZ in midinferior temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.12818 NCI-H441 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.30972 maturity-onset diabetes of the young type 5 DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.224 primary visual cortex (striate cortex, area V1/17)_24 pcw_M_12288 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.882559 CCDC85C CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.2567 Rectum adenocarcinoma_READ_TCGA-AG-3725-11A-01R-1736-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null lateral medullary reticular group, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.865625 BT483 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -1.44242 Excretory gland TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 1.0 1.039 PMC8851354-Table_6.xlsx-STAT3-bound_genes_GM12878-Supplementary_Table_6_STAT3-bound_unique_genes_in_GM12878_cells_STAT3 Rummagene Transcription Factor Associations 2026 1.0 null posteroventral (inferior) parietal cortex_10 mos_M_12977 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.915997 IZ in posteroinferior (ventral) parietal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.825514 SHANK3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.40561 NCI-H2170 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.997543 Disease of cellular proliferation DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.069 8MGBA CCLE Cell Line Gene Expression Profiles -1.0 -1.94896 CTCF_GM12878_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null RAD21_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null L-540 COSMIC Cell Line Gene Mutation Profiles 1.0 null NCI-H510A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.997543 GSE223609,GSE223610_0_v_1_kdm6a_human RummaGEO Gene Perturbation Signatures -1.0 null STRN CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.89266 Head and Neck squamous cell carcinoma_HNSC_TCGA-CR-6478-01A-11R-1873-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null animal TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 NRF2-31884422-A549-HUMAN-LUNG-CARCINOMA ChEA Transcription Factor Targets 2022 1.0 null NCI-H650 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.05699 D502MG DepMap CRISPR Gene Dependency 1.0 5.48691 MFAP3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.9641 H4K20me1_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null HOP-62 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.19082 GSE190555,GSE190557_2_v_3_chd4_human RummaGEO Gene Perturbation Signatures 1.0 null CCK81 CCLE Cell Line Gene CNV Profiles -1.0 -1.61167 SNU216 CCLE Cell Line Gene CNV Profiles 1.0 2.23269 Lung squamous cell carcinoma_LUSC_TCGA-56-7579-11A-01R-2045-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null enlarged kidney IMPC Knockout Mouse Phenotypes 1.0 null ESD CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.8107 Pheochromocytoma and Paraganglioma_PCPG_TCGA-P7-A5NY-05A-11R-A35K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null occipital pole, left, lateral aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.916317 DU-145 COSMIC Cell Line Gene Mutation Profiles 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-GU-A766-01A-11R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null extracellular region COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.098109 NCI-H322T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.8439 NCI-H1573 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.05699 CTV-1 COSMIC Cell Line Gene Mutation Profiles 1.0 null supraoptic nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.841723 G61 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.61438 Heart BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.31145 SG in primary somatosensory cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -2.67744 primary somatosensory cortex (area S1, areas 3,1,2)_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.45098 hsa-miR-3140-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 0.965816 CTCF_osteoblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-H7-A76A-01A-51R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null primary motor cortex (area M1, area 4)_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.25992