association	dataset	threshold value	standardized value
SPTSSA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.98175
FOXD2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	63.8133
GATA6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.1932
UBTF	ENCODE Transcription Factor Targets	1.0	null
SMAD5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.9565
TNFRSF18	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.14957
MEF2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	64.8084
H2AFZ_CD14-positive monocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RAB33B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.11228
ADAM17	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.1056
FOXP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.27859
H2AFZ_endothelial cell of umbilical vein_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CEBPB_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SKOV3	CCLE Cell Line Gene CNV Profiles	-1.0	-1.51402
CLDN23	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.76884
GSE148692,GSE148695_7_v_4_satb2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
PANC 05.04	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.831056
hsa-miR-23a	TargetScan Predicted Conserved microRNA Targets	1.0	1.26663
PMC4387713-supp_gad.255984.114_Table_S5.xlsx-S5F-Up_H3K27me3_DPY30_KD-Unnamed_12_AR	Rummagene Transcription Factor Associations 2026	1.0	null
CUTA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.00712
THEMIS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.26901
SLC19A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4521
SH4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.4443
FOXK1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.4962
hsa-miR-1305	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
FOXO6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.8563
FASTK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.2174
UACC-812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.95867
PHOX2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.6868
HIP1R	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.80264
Cloacal exstrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.766
Foxl2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.5399
NCIH446	DepMap CRISPR Gene Dependency	1.0	2.06864
GSE127790_6_v_3_zcchc8_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
EPLC272H	DepMap CRISPR Gene Dependency	1.0	2.25572
GSE94849_1_v_0_pinometostat_human	RummaGEO Drug Perturbation Signatures	1.0	null
FOXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.38
CDO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.48134
BACH1	ENCODE Transcription Factor Targets	1.0	null
hsa-miR-4286	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
CEBPB_IMR-90_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCIH841	CCLE Cell Line Gene CNV Profiles	-1.0	-2.55085
KYSE-520	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.82721
hsa-miR-1321	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
CALCOCO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.39741
IVD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.30347
Anchored component of membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.044
ARTN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.01491
TF1	CCLE Cell Line Gene CNV Profiles	1.0	1.839
ZNF202	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47465
ABCA3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.42927
PMC8528285-pbio.3001085.s010.xlsx-Fig_7A-MAX_WT_TESTES_MAX	Rummagene Transcription Factor Associations 2026	1.0	null
NCIH1355	CCLE Cell Line Gene CNV Profiles	-1.0	-1.89395
DMS 273	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.95867
SAP30	ENCODE Transcription Factor Targets	1.0	null
HT55	DepMap CRISPR Gene Dependency	1.0	6.65585
HCC4011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.922114
hsa-miR-499a-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
HDAC2_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H1651	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04577
MITF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.0984
SW626	DepMap CRISPR Gene Dependency	1.0	2.49296
X-linked recessive disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.045
SIX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.7326
CTCF_LNCaP clone FGC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
LBP-1	MotifMap Predicted Transcription Factor Targets	1.0	null
Anchored component of plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.349
EGR1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KAT2B_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SKMES1	CCLE Cell Line Gene CNV Profiles	1.0	2.02208
NCI-H510A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.874561
BSPRY	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82643
Six4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	16.2011
496100376_FWM_probable Alzheimer's disease_TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.85528
HT-29	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2602
hsa-miR-4739	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
NCI-N417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.24057
BIN67	DepMap CRISPR Gene Dependency	1.0	6.18146
PANC 02.03	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11462
PPP6R2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17179
Hmga1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	48.1303
496100380_FWM_no dementia_no TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.74333
H3K9ac_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
YY1	ENCODE Transcription Factor Targets	1.0	null
DMS 53	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.827955
496100542_PCx_no dementia_no TBI_82_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.47892
Extrinsic component of external side of plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.937
TCF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.0631
MDAMB453	CCLE Cell Line Gene CNV Profiles	1.0	1.72839
HT-55	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.90508
SOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.5274
Nr2f6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	51.8809
WDR74	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51042
A3KAW	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39796
RNA polymerase II termination complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.964
FOXA3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.8096
DMS454	CCLE Cell Line Gene CNV Profiles	1.0	2.36415
External side of plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.942
GSE107505_0_v_2_nanog_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
CHD2_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PHF8	ENCODE Transcription Factor Targets	1.0	null
KCI-MOH1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.82721
Tracheal epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.741
MDA-MB-453	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.19301
MDAMB415	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
SEMG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.05634
PMC11923433-BLOOD_BLD-2024-025618-mmc2.xlsx-S3_Specific_genes_in_CEBPA-dm-Supplemental_Table_3_The_subtype-specific_enriched_marker_genes_in_CEBPA-dm_subtype_patients_CEBPA	Rummagene Transcription Factor Associations 2026	1.0	null
NCIH196	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32621
Alx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	27.5458
PHF8_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SUDHL10	DepMap CRISPR Gene Dependency	1.0	2.53984
496100613_TCx_possible Alzheimer's disease_TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.83317
PKNOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.3898
NCO2	DepMap CRISPR Gene Dependency	1.0	4.38677
BARX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.3746
LNZ308	CCLE Cell Line Gene CNV Profiles	1.0	1.44147
TWIST1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.32192
SNU-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.90508
GSE148692,GSE148695_1_v_3_satb2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
NCI-H1623	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.874561
Bladder exstrophy-epispadias-cloacal exstrophy complex	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.501
NPAS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47334
COLO 800	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.81045
KCNIP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.27456
H3K27ac_K562_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Nkx3-2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	20.1132
COLO 741	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.996149
USF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.4909
ENDOG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.5815
FASN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17242
Atf3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	16.7206
SLC39A3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69703
GATA4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.2307
NAT9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04823
HCFC1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H1435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.985286
RCOR1_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BHLHE40	ENCODE Transcription Factor Targets	1.0	null
RERF-LC-KJ	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.922114
RCC10RGB	DepMap CRISPR Gene Dependency	1.0	2.38932
MKN45	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44707
MAZ_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FOXG1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.2002
TAL1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HEC50B	CCLE Cell Line Gene CNV Profiles	1.0	1.57074
HSPA12B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69252
POU5F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.2684
MIA PACA-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.922114
POLR2A_H1-hESC_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SNU620	DepMap CRISPR Gene Dependency	1.0	6.7156
GSE211983_0_v_2_nicotine_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
NCIH2073	CCLE Cell Line Gene CNV Profiles	-1.0	-2.20507
GATA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.0626
COLO 794	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.968181
GSE94849_6_v_0_pinometostat_human	RummaGEO Drug Perturbation Signatures	1.0	null
Nr2e3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	15.0435
A1CF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82003
HCC1143	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.90508
NR2F2_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FLAD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.56376
ERI3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15483
SIX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.4774
H3K27me3_megakaryocyte_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FOSL1::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.9607
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.21807
Nr1h2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	30.9352
CEBPE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47669
MAF::NFE2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.7734
CAPN5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.53962
TBC1D13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41185
SUM 1315M02	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.891206
UMUC16	DepMap CRISPR Gene Dependency	1.0	2.60653
OCI-M1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.32493
ZNF677	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.9152
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02826
ZNF184	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.5184
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.27132
hsa-miR-3924	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
59M	CCLE Cell Line Gene CNV Profiles	-1.0	-1.4541
GSE165647_0_v_3_cry2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
CDCA7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.87035
KLE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.9027
VPS37C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.33419
FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.377
CTCF_GM10248_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PSIP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90579
H3K4me1_HepG2_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
hsa-miR-4428	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
CHD2	ENCODE Transcription Factor Targets	1.0	null
bone marrow	HPA Tissue Protein Expression Profiles	1.0	2.04572
TEF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.70206
H3K4me1_CH12.LX_mm9_4	ENCODE Histone Modification Site Profiles	1.0	null
496100358_HIP_no dementia_TBI_95-99_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.51317
GNAS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.20104
496100335_PCx_no dementia_TBI_81_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.40868
496100363_TCx_no dementia_TBI_95-99_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.70342
Spz1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.6667
PUM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.01743
APPL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92487
cellular_component	GO Cellular Component Annotations 2015	1.0	null
TE5	CCLE Cell Line Gene CNV Profiles	-1.0	-1.52067
EZH2_endothelial cell of umbilical vein_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
WDR75	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.22282
THAP9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.54927
IGR1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.3624
BHLHA15	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.6
FOXP3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.4187
SK-MES-1	COSMIC Cell Line Gene CNV Profiles	1.0	3.12177
NCI-H1838	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.922114
spleen	GTEx Tissue Gene Expression Profiles	1.0	1.01564
MAFK_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hsa-miR-4306	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
BICR18	CCLE Cell Line Gene CNV Profiles	1.0	1.57052
NR2F2	ENCODE Transcription Factor Targets	1.0	null
FOXP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.7249
CAL-85-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.01918
T-47D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.922114
EB2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2375
496100583_PCx_dementia_TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.58892
HCC2279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19222
NCIH1693	CCLE Cell Line Gene CNV Profiles	1.0	2.16678
salivary gland	GTEx Tissue Gene Expression Profiles	-1.0	-0.839668
Arid5a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	29.4002
GTL-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.935188
hsa-miR-4676-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
NCI-H441	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.82721
Duodenal atresia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.513
FOXK2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.496
HCC1569	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.21807
Anchored component of external side of plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.984
ZSCAN4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	54.0524
SK-MEL-31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07019
NCIH2227	CCLE Cell Line Gene CNV Profiles	-1.0	-1.8155
HCFC1	ENCODE Transcription Factor Targets	1.0	null
P3H4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.73438
H3K4me1_CH12.LX_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
HCC1937	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.81045
WICH complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.936
BCL6B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.4158
CAS1	DepMap CRISPR Gene Dependency	1.0	2.35531
Wolf-Hirschhorn syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.16
C32TG	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33458
H3K27me3_megakaryocyte_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SRCAP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.54436
TBL1XR1_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hsa-miR-4773	TargetScan Predicted Conserved microRNA Targets	1.0	0.714812
NCIH2030	CCLE Cell Line Gene CNV Profiles	1.0	1.46333
SOX15	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.4427
UBTF_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SNF8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.08996
RMUG-S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.985286
MS751	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.83186
FOXP4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.2163
RCM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26096
G130	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.874561
NCIH1651	CCLE Cell Line Gene CNV Profiles	-1.0	-1.72161
hsa-miR-4309	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
496100566_FWM_no dementia_no TBI_82_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.10876
ZBED1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.7132
POU2F1::SOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.4156
UROD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.66679
OUMS27	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36728
HCC1359	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.49187
PK-59	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.985286
LDB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.52993
ARPC5L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.00981
DNAJC16	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.71075
DCAF12L2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.05593
CBX3_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H2AFZ_fibroblast of dermis_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EP300	ENCODE Transcription Factor Targets	1.0	null
AU565	CCLE Cell Line Gene CNV Profiles	-1.0	-1.92178
SW 403	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.43739
ZNF667	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.4374
hsa-miR-4775	TargetScan Predicted Conserved microRNA Targets	1.0	0.23348
SOX21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.4568
WWC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.24497
RORA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	49.6022
COLO792	DepMap CRISPR Gene Dependency	1.0	3.08371
POU2F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.7183
integral component of membrane	GO Cellular Component Annotations 2015	1.0	null
CDX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.2151
SCC4	CCLE Cell Line Gene CNV Profiles	1.0	3.2803
MDAMB453	DepMap CRISPR Gene Dependency	1.0	3.22698
TXN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75591
SYDE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.18305
PRKAA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.64492
496100653_PCx_probable Alzheimer's disease_no TBI_82_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.54709
CAPAN1	DepMap CRISPR Gene Dependency	1.0	3.85993
Integral component of external side of plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.412
T98G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.827955
BAIAP2L2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.68041
GSE148692,GSE148695_5_v_3_satb2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
496100628_FWM_dementia_TBI_77_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.45896
MEF2C	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	55.0652
NR1I2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.7948
NR4A2::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.9257
ME-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.9027
Factor VIII deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.932
GSE208350_4_v_1_fgfr1_human	RummaGEO Gene Perturbation Signatures	1.0	null
hsa-miR-3198	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
GSE94849_7_v_0_pinometostat_human	RummaGEO Drug Perturbation Signatures	1.0	null
SEPTIN7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.22873
intrinsic component of membrane	GO Cellular Component Annotations 2015	1.0	null
CEBPB_K562_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
membrane	GO Cellular Component Annotations 2015	1.0	null
PA1	DepMap CRISPR Gene Dependency	1.0	3.1135
ZNF214	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.7307
SREBF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.2056
H3K4me1_CH12.LX_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
OVCA 429	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.933905
Sox17	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	20.1419
MOLM-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11462
NCIH1755	DepMap CRISPR Gene Dependency	1.0	2.02047
Coronary atherosclerotic plaque	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.746
YAMATO	DepMap CRISPR Gene Dependency	1.0	3.90794
membrane part	GO Cellular Component Annotations 2015	1.0	null
hsa-miR-450b-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
SW 780	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.831731
C75	DepMap CRISPR Gene Dependency	1.0	2.01871
THNSL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.32999
GSE183271_5_v_0_nicotinamide_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
MYF6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1247
GSE122101,GSE122103_3_v_1_ssu72_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
TRPS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9853
USF3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.19076
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.67769
FOXE1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	82.4495
UM-UC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.921357
MAFG::NFE2L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.7324
Intellectual disability	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.236
interleukin-9 receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.068
SPCS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.7594
SNUC5	CCLE Cell Line Gene CNV Profiles	1.0	1.38778
FOXD1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.3
ZNF490	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.35451
TPST2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.56041
FADS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.72995
NR1I3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.2092
ZNF391	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.29373
MAFK	ENCODE Transcription Factor Targets	1.0	null
G121	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07019
FU97	CCLE Cell Line Gene CNV Profiles	-1.0	-1.58767
L1CAM	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12821
Bladder exstrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.564
hsa-miR-185	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
POLR2A_HGPS cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FOXO1::FLI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.8438
496100346_FWM_no dementia_TBI_81_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.83249
RERFGC1B	DepMap CRISPR Gene Dependency	1.0	3.66983
MM485	DepMap CRISPR Gene Dependency	1.0	2.62853
Cauda epididymis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.909
H3K4me2_K562_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
GSE79291_1_v_2_streptozotocin_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
CEBPB_A549_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
FOXO4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.4149
496100591_TCx_dementia_TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.48445
BT474	CCLE Cell Line Gene CNV Profiles	-1.0	-1.68223
TMEM160	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.66574
H2AFZ_osteoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PATZ1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.60777
HCC1937	CCLE Cell Line Gene CNV Profiles	-1.0	-1.51695
SW948	CCLE Cell Line Gene CNV Profiles	-1.0	-1.3861
MDA-MB-231	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.874561
hsa-miR-2054	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
MTF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61078
hsa-miR-4742-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
External side of cell wall	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.38
ANKRD16	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.85327
BHLHE40_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MAFF	ENCODE Transcription Factor Targets	1.0	null
hsa-miR-4758-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
TMEM201	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.67941
SCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09626
GSE85565_1_v_0_tcf21_human	RummaGEO Gene Perturbation Signatures	-1.0	null
ZFP91	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.64534
496100657_FWM_probable Alzheimer's disease_no TBI_82_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	7.78623
NCIH1373	CCLE Cell Line Gene CNV Profiles	1.0	1.35546
JEKO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.985286
hsa-miR-146b-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
OVCAR-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.67632
HEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.933233
FOXA1	ENCODE Transcription Factor Targets	1.0	null
SNU182	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33469
Neuro D	MotifMap Predicted Transcription Factor Targets	1.0	null
OVCAR433	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.50419
hsa-miR-4644	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
SNU-398	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.827955
Alx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	35.0489
TCF7L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.8662
TFAP4::FLI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.7977
hsa-miR-3189-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
RORC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.0659
hsa-miR-1289	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
CHD1	ENCODE Transcription Factor Targets	1.0	null
SETDB1	ENCODE Transcription Factor Targets	1.0	null
HUH1	CCLE Cell Line Gene CNV Profiles	1.0	1.53366
hsa-miR-3164	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
STAT3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.3718
MX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.976052
heart	GTEx Tissue Gene Expression Profiles	1.0	0.869363
hsa-miR-758	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
EGR1	ENCODE Transcription Factor Targets	1.0	null
VILL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.3517
POU3F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.5414
T47D	CCLE Cell Line Gene CNV Profiles	-1.0	-1.64657
GSE107505_3_v_2_nanog_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Rxra	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	38.1159
496100369_PCx_no dementia_TBI_95-99_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.57745
PSMG3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.2836
TCF7L2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7469
CLDN12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.26915
Nr1h3::Rxra	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	24.2206
Pou5f1::Sox2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	66.4694
EZH2_mammary epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
U266B1	CCLE Cell Line Gene CNV Profiles	1.0	1.65131
NDUFA4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.5554
MOGGUVW	DepMap CRISPR Gene Dependency	1.0	3.68594
MDA-MB-330	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.50419
BNC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.4379
Ppara	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.2607
MT-CYB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9444
GSE148692,GSE148695_2_v_4_satb2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
EP300_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CEBPB	ENCODE Transcription Factor Targets	1.0	null
hsa-miR-891b	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
hsa-miR-569	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
PRMT7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.66408
Esrrg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	19.5237
RPMI7951	CCLE Cell Line Gene CNV Profiles	-1.0	-1.58414
SMZ1	DepMap CRISPR Gene Dependency	1.0	2.00945
CHD1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hsa-miR-129-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
Arx	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	19.405
FOXA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.3393
Sox5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.3306
TRIM59	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.73951
SW837	CCLE Cell Line Gene CNV Profiles	1.0	2.59998
plasma membrane	GO Cellular Component Annotations 2015	1.0	null
NCIH1869	DepMap CRISPR Gene Dependency	1.0	3.08142
WM88	CCLE Cell Line Gene CNV Profiles	-1.0	-2.0918
POLR2A	ENCODE Transcription Factor Targets	1.0	null
ZNF384	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	167.822
TAPBPL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.50104
HCC38	CCLE Cell Line Gene CNV Profiles	1.0	1.88689
eGFP-JUND_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.61424
T84	DepMap CRISPR Gene Dependency	1.0	2.35904
GSE183271_1_v_0_nicotinamide_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
NRIP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15024
External side of cell outer membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.299
C16orf87	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.01454
FOXP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.6606
ERI2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60162
SETDB1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EFM-192A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2602
TUHR10TKB	CCLE Cell Line Gene CNV Profiles	1.0	1.41192
DMS114	CCLE Cell Line Gene CNV Profiles	-1.0	-1.73896
Sox7	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	21.0251
ONECUT3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	60.5233
496100368_PCx_probable Alzheimer's disease_no TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.71927
ZNF354A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	96.6124
EOMES	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.51252
TP53	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.0425
GSE211286_1_v_3_tcf12_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
EZH2	ENCODE Transcription Factor Targets	1.0	null
MXD3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.40061
Nr1h4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.3849
496100434_HIP_no dementia_TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.11183
OCUM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19298
FOXC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.7593
BRWD3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.67141
ARMC5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.18335
ZSCAN16	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.3381
G112	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.827955
RERFLCAD2	CCLE Cell Line Gene CNV Profiles	1.0	2.11006
HOXD9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.3659
Intestinal atresia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.278
PMC8528285-pbio.3001085.s010.xlsx-Fig_S7B-GENE_LIST_UPLOADED_TO_ENRICHR_MAX_WT_TESTES_874_GENES_MAX	Rummagene Transcription Factor Associations 2026	1.0	null
HS695T	CCLE Cell Line Gene CNV Profiles	1.0	1.51146
496100479_FWM_no dementia_TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.15366
DMRT3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.0145
hsa-miR-4756-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
CBX3	ENCODE Transcription Factor Targets	1.0	null
DNAJC10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.41909
CTCF_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MKN-45	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.90508
YY1_K562_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DCP1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.22866
BHY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.874561
EJM	CCLE Cell Line Gene CNV Profiles	1.0	1.59625
RGL4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78106
POU3F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.9527
Specific developmental disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.067
SAP30_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
L3MBTL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78113
ZNF558	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	101.569
496100448_TCx_possible Alzheimer's disease_no TBI_88_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.22587
KML1	DepMap CRISPR Gene Dependency	1.0	2.2333
hsa-miR-7	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
NDUFA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.01001
H4K20me1_HeLa-S3_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me1_K562_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
KP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18336
OUMS-23	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.874561
hsa-miR-23c	TargetScan Predicted Conserved microRNA Targets	1.0	1.26663
HOXA10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.5915
GSE198165,GSE198166_0_v_2_zfp266_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
EB1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.78398
SNU-620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11394
NB6	DepMap CRISPR Gene Dependency	1.0	4.55393
Intrinsic component of external side of plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.894
FOXA1_T47D_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hsa-miR-4503	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
SW837	COSMIC Cell Line Gene CNV Profiles	1.0	3.12177
PK-8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.36992
NIHOVCAR3	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33047
A673	DepMap CRISPR Gene Dependency	1.0	2.29307
Axonemal microtubule	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.961
TBL1XR1	ENCODE Transcription Factor Targets	1.0	null
Dux	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	15.6515
COQ6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9681
hsa-miR-874	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
CSTB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.47677
hsa-miR-550b	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
RRAGC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.89341
EZH2_fibroblast of dermis_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DUSP28	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.48641
NCIH1975	DepMap CRISPR Gene Dependency	1.0	2.09916
GSE163862_1_v_3_cisplatin_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
HPAC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.922114
FOXS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.6123
SKBR3	CCLE Cell Line Gene CNV Profiles	-1.0	-1.95648
SW579	CCLE Cell Line Gene CNV Profiles	1.0	1.32984
hsa-miR-3688-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
KAT2B	ENCODE Transcription Factor Targets	1.0	null
GSE180200,GSE180201_2_v_0_qpctl_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
ETV2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.1702
TIAL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.21924
hsa-miR-371-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
RRM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.64818
PK45H	CCLE Cell Line Gene CNV Profiles	1.0	1.77738
GSE224877_3_v_0_pctp_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
NCI-H1299	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.996149
ZSCAN29	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.0292
OVISE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04577
GSE107505_1_v_2_nanog_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
FOXC1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.7152
FOXD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	112.145
cell part	GO Cellular Component Annotations 2015	1.0	null
FOS::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.8219
Cohen syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.339
ZNF334	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.7893
hsa-miR-23b	TargetScan Predicted Conserved microRNA Targets	1.0	1.26663
UNC93B1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.11127
SNU216	CCLE Cell Line Gene CNV Profiles	1.0	1.45691
PMC8528285-pbio.3001085.s010.xlsx-Fig_7E-MAX_WT_TESTES_MAX	Rummagene Transcription Factor Associations 2026	1.0	null
PROKR2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.72705
ZEB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4742
HCC1599	CCLE Cell Line Gene CNV Profiles	1.0	1.88929
NCI-H2170	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.874561
THRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.3407
H4C1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17355
CTCF	ENCODE Transcription Factor Targets	1.0	null
H3K9me1_K562_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
ZBTB5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.48334
RCOR1	ENCODE Transcription Factor Targets	1.0	null
WIDR	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26096
Developmental disorder of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.004
MAZ	ENCODE Transcription Factor Targets	1.0	null
hsa-miR-1208	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
Rarb	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	58.7236
MBD3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.10047
H3K9ac_K562_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
NR2C2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69322
LOU-NH91	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.992991
496100331_TCx_probable Alzheimer's disease_TBI_100+_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.91893
SCC4	DepMap CRISPR Gene Dependency	1.0	21.547
FOXA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.6788
H3K4me3_K562_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
MG-63	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.27218
PPARGC1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83415
HSF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.836
SMAD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.593
SUDHL10	CCLE Cell Line Gene CNV Profiles	1.0	1.68834
ZFP42	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.5696
AKR1A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.28876
OVSAHO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.874561
TEF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.2221
TAL1	ENCODE Transcription Factor Targets	1.0	null
MAFF_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MCFD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82258
PURA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.2762
HDAC2	ENCODE Transcription Factor Targets	1.0	null
ZNF644	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.46021
LCLC-97TM1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.946477
BACH1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC193	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.5828
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.44913
496100495_FWM_no dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.89662
EFM-192C	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.5842