association	dataset	threshold value	standardized value
hsa-miR-551a	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
496100466_PCx_probable Alzheimer's disease_no TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.51369
anterior (rostral) cingulate (medial prefrontal) cortex_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.03468
TEAD1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.6379
primary somatosensory cortex (area S1, areas 3,1,2)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.35347
SCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.17573
CP in midlateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.31821
central nucleus of inferior colliculus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.06748
primary auditory cortex (core)_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.02538
NCI-H187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.990838
NCI-H2810	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.852629
G361	CCLE Cell Line Gene CNV Profiles	1.0	1.71008
HOXA5	JASPAR Predicted Transcription Factor Targets	1.0	null
spleen	GTEx Tissue Gene Expression Profiles	-1.0	-0.868974
ventrolateral prefrontal cortex_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.06204
hippocampus (hippocampal formation)_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.930224
hsa-miR-4459	TargetScan Predicted Conserved microRNA Targets	1.0	0.714812
ES-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.972434
hsa-miR-4780	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
ERF::FOXO1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.7629
FOS::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	48.4664
KARPAS-620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.918785
PHOX2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.0359
OCI-LY-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.931797
NFE2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.9627
HNF1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.5438
DANG	CCLE Cell Line Gene CNV Profiles	1.0	2.3563
CTCF_LNCaP clone FGC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hsa-miR-650	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
hsa-miR-4668-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
MEWO	CCLE Cell Line Gene CNV Profiles	-1.0	-1.77756
hsa-miR-4324	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
Endocrine gland	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.3158
496100418_TCx_no dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	6.30616
BCL6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.5408
hsa-miR-515-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
SET2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.38765
TGIF2LY	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.0819
KNS42	CCLE Cell Line Gene CNV Profiles	1.0	1.73435
BARX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.1303
upper (rostral) rhombic lip	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.61463
hsa-miR-125b	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
SP in granular insular cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.97546
primary auditory cortex (core)_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.865636
mediodorsal nucleus of thalamus_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.886376
hsa-miR-4253	TargetScan Predicted Conserved microRNA Targets	1.0	0.283838
GSE169205_3_v_1_sirt5_human	RummaGEO Gene Perturbation Signatures	1.0	null
SP in caudal hippocampal proper	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.837996
primary auditory cortex (core)_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.5618
ME-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.80008
hsa-miR-4709-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
lateral nucleus of pulvinar	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.01058
cytoplasmic part	LOCATE Predicted Protein Localization Annotations	1.0	null
Internal male genital organ	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
UACC-257	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.32229
posteroventral (inferior) parietal cortex_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.85497
hsa-miR-551b	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
hsa-miR-346	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
MEIS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.3659
SOX14	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.894
posteroventral (inferior) parietal cortex_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.12861
KYO1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32819
orbital frontal cortex_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.66697
STAT1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.8812
primary auditory cortex (core)_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.56655
CTCF	ENCODE Transcription Factor Targets	1.0	null
posterior (caudal) superior temporal cortex (area 22c)_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.49796
dorsolateral prefrontal cortex_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-3.10435
ETV5::DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.6379
VZ in hypothalamic portion	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.10627
DAN-G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26423
hsa-miR-324-5p	TargetScan Predicted Conserved microRNA Targets	1.0	0.212286
vagina	GTEx Tissue Gene Expression Profiles	-1.0	-0.868974
dorsal cochlear nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.52594
SG in inferolateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.09265
MYF6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.307
outer CP in primary visual cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.880499
CA9-22	COSMIC Cell Line Gene CNV Profiles	1.0	2.93899
IZ in caudal midinferior temporal cortex (area TF)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.86581
HCC1599	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.90055
hsa-miR-629	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
primary visual cortex (striate cortex, area V1/17)_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.857906
RCC4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.40645
ventral posterior lateral nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.885405
IGR39	CCLE Cell Line Gene CNV Profiles	1.0	1.63351
hsa-miR-198	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.921135
ventral medial nucleus of thalamus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.24084
NFATC3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.8715
SG in primary visual cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.02193
KELLY	CCLE Cell Line Gene CNV Profiles	-1.0	-1.5065
single-organism developmental process	GO Biological Process Annotations 2015	1.0	null
hsa-miR-125a-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
G-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.999727
IZ in primary somatosensory cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.40128
DB	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10182
primary motor cortex (area M1, area 4)_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.03388
primary visual cortex (striate cortex, area V1/17)_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.71246
NOMO1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.99728
gamete generation	GO Biological Process Annotations 2015	1.0	null
raphe magnus nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.73043
anterior amygdaloid area	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.911692
KYSE-150	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.852629
rostral part of entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.55297
HUH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.19301
Outer dense fiber	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.862
ZNF652	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.634
Whole body	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
ZBED2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.9522
outer CP in subgenual (subcallosal) cingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.13496
primary motor cortex (area M1, area 4)_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.06961
GTL-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.047
PANC0213	CCLE Cell Line Gene CNV Profiles	1.0	1.40351
dorsorostral division of MFC (area 32)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.833481
ETV2::FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.9715
posterior (caudal) superior temporal cortex (area 22c)_16 pcw_M_12879	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.66057
oculomotor nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.39517
spermatogenesis	GO Biological Process Annotations 2015	1.0	null
RHOXF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.7856
single organism reproductive process	GO Biological Process Annotations 2015	1.0	null
DUXA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.434
BNC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.6566
NCI-H446	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16745
JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.561
Sperm flagellum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.641
BATF::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.2881
EFO-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.63168
FOS::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.1928
striatum_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.4055
hsa-miR-514	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
hsa-miR-4518	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
dorsolateral prefrontal cortex_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.92665
Autism spectrum disorder or schizophrenia	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.769897
primary motor cortex (area M1, area 4)_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.23412
IZ in posteroinferior (ventral) parietal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.97608
periaqueductal gray substance, dorsolateral portion	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.25611
inferolateral temporal cortex (area TEv, area 20)_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.69481
primary somatosensory cortex (area S1, areas 3,1,2)_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.956641
TE8	CCLE Cell Line Gene CNV Profiles	1.0	1.44278
hsa-miR-4472	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
striatum_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.07445
hsa-miR-4779	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
kidney	GTEx Tissue Gene Expression Profiles	1.0	1.4666
ventrolateral prefrontal cortex_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.20017
FOSL1::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.2351
primary motor cortex (area M1, area 4)_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.03594
hsa-miR-3175	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
hsa-miR-4722-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
membrane part	GO Cellular Component Annotations 2015	1.0	null
hsa-miR-4706	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
MAFK	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.1011
SNU1076	CCLE Cell Line Gene CNV Profiles	1.0	1.83177
posterior (caudal) superior temporal cortex (area 22c)_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.29524
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.999727
ONECUT3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	53.5329
inferior colliculus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-2.06828
CAL27	CCLE Cell Line Gene CNV Profiles	1.0	1.55086
NFYC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.4937
orbital frontal cortex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.944093
MZ in dorsomedial frontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.42512
VZ in subcallosal region	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.970034
ZNF341	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.3513
NCI-H2009	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.986851
inferolateral temporal cortex (area TEv, area 20)_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.865636
SCC-25	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.40472
NCI-H522	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01776
hsa-miR-3150b-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
Testis	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
PITX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.261
Reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Spermatozoon	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.281
hsa-miR-3928	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
cell differentiation	GO Biological Process Annotations 2015	1.0	null
CREB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.8931
HOXA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.4704
lateral subdivision of BNST	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.858447
MDA-MB-415	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.991737
SU.86.86	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.991737
subthalamic nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.27917
primary auditory cortex (core)_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.3678
anterior (rostral) cingulate (medial prefrontal) cortex_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.20165
GSE160765_2_v_1_twist1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
FOSB::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.5429
orbital frontal cortex_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.973097
parasolitary nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.927485
NCI-H1693	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.32229
hsa-miR-623	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
PHOX2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	54.2253
HCC630	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09674
CMK	CCLE Cell Line Gene CNV Profiles	-1.0	-1.51396
SATB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.7888
NCIH524	CCLE Cell Line Gene CNV Profiles	-1.0	-1.90811
MSANTD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.1244
TAL1::TCF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.9545
HCC38	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22406
parafascicular nucleus of thalamus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.21741
C2BBE1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29361
PBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.7222
SEPTIN7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.22873
hypoglossal nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.884188
single-organism cellular process	GO Biological Process Annotations 2015	1.0	null
JIMT-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.06471
orbital frontal cortex_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.835694
orbital frontal cortex_16 pcw_M_12879	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.00381
anterior (rostral) cingulate (medial prefrontal) cortex_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.971071
HBL-100	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.930728
WDR75	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.22282
hsa-miR-4747-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
laterorostral part of entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.0105
ventricular (matrix) zone of pons	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.8492
496100419_TCx_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.39233
hsa-miR-3124-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
HCC1011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.918785
LOX-IMVI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.930728
GATA5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9745
striatum_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.17016
ventral lateral nucleus of thalamus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.39486
hsa-miR-4303	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
SNU216	CCLE Cell Line Gene CNV Profiles	1.0	1.35372
hsa-miR-320c	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
496100288_HIP_no dementia_TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.423
hsa-miR-3150a-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
striatum_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.11848
FOS	JASPAR Predicted Transcription Factor Targets	1.0	null
9+2 motile cilium	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.517
rostral presubiculum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.907617
intrinsic component of membrane	GO Cellular Component Annotations 2015	1.0	null
posterior (caudal) superior temporal cortex (area 22c)_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.13314
hsa-miR-93	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
Female reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
lateral hypothalamic area, anterior part	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.19404
KO52	CCLE Cell Line Gene CNV Profiles	-1.0	-2.67925
posterior (caudal) superior temporal cortex (area 22c)_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.992683
solitary nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.830496
hsa-miR-3612	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
CREB3L4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.9588
GSE152734,GSE152735_2_v_0_pbrm1_human	RummaGEO Gene Perturbation Signatures	1.0	null
hsa-miR-4513	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
intracellular membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
hsa-miR-1343	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
breast	GTEx Tissue Gene Expression Profiles	1.0	0.919645
hsa-miR-4424	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
primary motor cortex (area M1, area 4)_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.12151
layer III of caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.90269
ZNF324	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	55.2413
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
hsa-miR-4749-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
OVMANA	CCLE Cell Line Gene CNV Profiles	-1.0	-1.53353
superficial layers of olfactory entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.891292
EJM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26423
organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
GSE182921_0_v_1_slit2_human	RummaGEO Gene Perturbation Signatures	1.0	null
Ciliary membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.488
ZNF175	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.6558
SK-CO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.48012
NCI-H1373	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.851538
SW 948	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26423
FOXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.9831
NCIH1793	CCLE Cell Line Gene CNV Profiles	1.0	1.47926
primary somatosensory cortex (area S1, areas 3,1,2)_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.35347
YAPC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.851538
hsa-miR-1266	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
GSE160817_7_v_1_slamf6_human	RummaGEO Gene Perturbation Signatures	-1.0	null
U-698-M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.11042
SNU601	CCLE Cell Line Gene CNV Profiles	-1.0	-2.42446
orbital frontal cortex_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.77215
RORB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.5816
hsa-miR-548an	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
NFIC	JASPAR Predicted Transcription Factor Targets	1.0	null
FADU	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.91793
IZ in superolateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.926777
PGR	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.5772
midbrain reticular formation	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.871298
COLO 699	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.047
Intramolecular phosphotransferase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.653
NCI-H146	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.864985
MOLT-16 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.623
NCI-H2452	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.27928
SNU620	CCLE Cell Line Gene CNV Profiles	1.0	1.45206
CP in caudal hippocampus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-2.51531
MECOM	ChEA Transcription Factor Targets	1.0	null
COLO 857	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05739
hsa-miR-302e	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
hsa-miR-539	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
NFYA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.8222
Sperm flagellum	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.617
layer I of piriform cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.06939
SNU-601	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.64289
orbital frontal cortex_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.889241
BACH1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.1586
anterior (rostral) cingulate (medial prefrontal) cortex_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.56851
VZ in caudal hippocampal proper	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.899214
COLO 853	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.987957
OAW42	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.65965
BICR 22	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.00981
primary somatosensory cortex (area S1, areas 3,1,2)_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.24019
OVKATE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.00981
small intestine	GTEx Tissue Gene Expression Profiles	-1.0	-0.868974
HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.1687
496100426_PCx_no dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.68601
BATF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.1577
SP in dorsomedial frontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.1321
male gamete generation	GO Biological Process Annotations 2015	1.0	null
RERF-LC-OK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.864985
ATF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.7377
MKN-74	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2684
FOXO1::ELK3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.2663
HUH7	CCLE Cell Line Gene CNV Profiles	1.0	3.2803
multicellular organismal reproductive process	GO Biological Process Annotations 2015	1.0	null
agranular insular cortex (area Iag)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.11413
PPARD	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.0569
choroid plexus of the fourth ventricle	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.39103
medial subdivision of central nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-2.85238
ME1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.25489
inferolateral temporal cortex (area TEv, area 20)_23 yrs_M_12300	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.73791
CDX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.5965
496100472_PCx_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.31303
dorsal thalamus_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.24918
laterodorsal subdivision of area 8	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.20428
single-organism process	GO Biological Process Annotations 2015	1.0	null
BATF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.4646
hsa-miR-4447	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
hsa-miR-3974	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
PAX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.1612
indusium griseum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.66633
TCF7L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.4664
ARTN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.01491
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
hsa-miR-3120-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
SK-BR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.870614
FOSL1::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.824
ME-180	COSMIC Cell Line Gene CNV Profiles	1.0	2.93899
HEY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.965858
NCI-H1581	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0631
Gland	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
hsa-miR-384	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
hsa-miR-520d-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
primary motor cortex (area M1, area 4)_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.48261
496100416_FWM_dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.56949
SP in rostral perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.25123
ETV5::FOXO1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.0475
hsa-miR-587	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
SG in medial temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.962446
OVMANA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.70607
HUH-7	COSMIC Cell Line Gene CNV Profiles	1.0	2.93899
CMK115	CCLE Cell Line Gene CNV Profiles	-1.0	-1.56782
C2BBE1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44432
ventrolateral prefrontal cortex_10 mos_M_12977	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.825135
ME-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.85818
CEBPD	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.824
HOXD9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.2371
VAX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.5896
ATF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.2782
KMS-12-PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.24734
hsa-miR-4762-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
KYSE-450	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.919393
COR-L279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33471
intracellular organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
HGC-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07171
anterior (rostral) cingulate (medial prefrontal) cortex_13 pcw_M_12820	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.63829
SKM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.57655
ETV1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.7657
hsa-miR-320b	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
FOS::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.4861
MZ in dorsomedial extrastriate cortex (V2)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.20582
UCSD-242L	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.047
NCI-H1573	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.941767
SF767	CCLE Cell Line Gene CNV Profiles	1.0	1.44985
fallopian tube	GTEx Tissue Gene Expression Profiles	-1.0	-0.868974
MEF2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.7847
dorsal thalamus_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.825856
LHX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.8532
hsa-miR-514b-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
integral component of membrane	GO Cellular Component Annotations 2015	1.0	null
BACH2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	56.7405
FOXC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.6424
VZ in thalamic region	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.24205
PC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.91793
Male reproductive gland	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
intercalated nucleus of medulla	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.26106
membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
hsa-miR-3151	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
inner CP in temporal polar cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.13335
bladder	GTEx Tissue Gene Expression Profiles	1.0	1.03577
hsa-miR-320d	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
HOXC13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.0778
hsa-miR-323b-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
SOX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.6267
Domain of unknown function DUF4599	InterPro Predicted Protein Domain Annotations	1.0	null
sc1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.977
primary motor-sensory cortex (samples)_16 pcw_M_12879	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.84164
CDX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.0761
JIMT1	CCLE Cell Line Gene CNV Profiles	1.0	2.42653
rostral subdivision of paraventricular nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.16557
FOSL2::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	52.11
BC3C	CCLE Cell Line Gene CNV Profiles	1.0	1.40788
HGC27	CCLE Cell Line Gene CNV Profiles	1.0	1.36469
orbital frontal cortex_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.84918
SP in caudal perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.31168
dorsolateral prefrontal cortex_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.934703
COPS4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.15546
496100421_PCx_probable Alzheimer's disease_TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.43711
posteroventral (inferior) parietal cortex_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.21911
hippocampus (hippocampal formation)_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.937177
anterior (rostral) cingulate (medial prefrontal) cortex_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.987362
F36P	CCLE Cell Line Gene CNV Profiles	-1.0	-1.51241
DUX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.9364
NUDUL1	CCLE Cell Line Gene CNV Profiles	1.0	1.37085
MEWO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.81547
FOSB::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.4008
Male reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
NCIH2228	CCLE Cell Line Gene CNV Profiles	1.0	1.5873
SIX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.2723
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
primary somatosensory cortex (area S1, areas 3,1,2)_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.889241
BICR 78	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.35599
paravermis of cerebellum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.0791
BV173	CCLE Cell Line Gene CNV Profiles	-1.0	-1.51009
TGIF2LX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.5606
MECOM-23826213-KASUMI-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.990838
HOS	CCLE Cell Line Gene CNV Profiles	1.0	1.65131
Gonad	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
HOXA10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.5311
MZ in rostral entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.51119
EPLC-272H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.931797
NCI-H1666	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.930728
biological_process	GO Biological Process Annotations 2015	1.0	null
COLO 829	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.17707
A-427	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.047
caudal division of IPC (area 39)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.877468
hsa-miR-4784	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
ELK1::HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.0237
hsa-miR-4769-3p	TargetScan Predicted Conserved microRNA Targets	1.0	0.568687
Phosphomannomutase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.653
lateral intermediate part of entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.05774
EOL1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.67962
MDAMB453	CCLE Cell Line Gene CNV Profiles	-1.0	-2.0605
G120	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.3865
NU-DUL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.8562
SET-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.86454
transient Purkinje cell clusters	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.592
EFO27	CCLE Cell Line Gene CNV Profiles	1.0	1.3598
HCC1569	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.047
MKN-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.047
KYSE-140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.864985
MKN-45	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.52928
NCI-H2228	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.24734
MDAMB157	CCLE Cell Line Gene CNV Profiles	-1.0	-1.82241
Female reproductive gland	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
interpositus (intermediate) nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.00764
hsa-miR-4489	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
A1207	CCLE Cell Line Gene CNV Profiles	1.0	1.43437
ONECUT1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.57
primary somatosensory cortex (area S1, areas 3,1,2)_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.26288
medioventral part of putamen	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.50562
reproductive process	GO Biological Process Annotations 2015	1.0	null
SW 1990	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.8128
OAW28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.824075
hsa-miR-128	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
intracellular part	LOCATE Predicted Protein Localization Annotations	1.0	null
primary auditory cortex (core)_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.10137
SK-MEL-31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33471
hsa-miR-4642	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
FOSL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.8968
OCI-LY-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21926
KELLY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.95529
hippocampus (hippocampal formation)_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.16909
YY1	JASPAR Predicted Transcription Factor Targets	1.0	null
SRF	JASPAR Predicted Transcription Factor Targets	1.0	null
Egg yolk	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.48
FOSL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.3718
SW1990	CCLE Cell Line Gene CNV Profiles	-1.0	-2.3321
hsa-miR-506	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
hsa-miR-320e	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
microbody	LOCATE Predicted Protein Localization Annotations	1.0	null
IZ in medial temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.11979
mediodorsal nucleus of thalamus_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.01312
JURLMK1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.56567
anterior (rostral) cingulate (medial prefrontal) cortex_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.99864
hsa-miR-320a	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
G44	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14923
principal sensory nucleus of trigeminal nerve	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.857146
GR-M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.58118
PBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.0738
primary auditory cortex (core)_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.833692
ventrolateral prefrontal cortex_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.43969
K-562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.047
CREM	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.682
OVOL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.4824
MHH-ES-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21926
Urogenital system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
FOSL1::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.8304
NFATC4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.7694
PMC8481886-Table_2.xlsx-A_subsets-AF_MSC_UdRPC_MSC	Rummagene Transcription Factor Associations 2026	1.0	null
GSE202434,GSE202438_2_v_14_talazoparib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
496100438_PCx_possible Alzheimer's disease_no TBI_88_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.31049
internal segment of globus pallidus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.73726
hsa-miR-124	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
inferolateral temporal cortex (area TEv, area 20)_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.4553
PK-45P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.58946
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10141
hsa-miR-625	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.921135
hsa-miR-4429	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
posterior (caudal) superior temporal cortex (area 22c)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.58507
posterior hypothalamic nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.40269
HMBOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.2478
PROP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.296
amygdaloid complex_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.12249
MG-63	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10271
SRY	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.0357
ZNF766	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.9633
G111	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07053
ERF::HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.0764
ZIM3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.5399
496100469_TCx_no dementia_TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.09969
hsa-miR-4319	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
CMK86	CCLE Cell Line Gene CNV Profiles	-1.0	-1.78891
OVKATE	CCLE Cell Line Gene CNV Profiles	1.0	1.79286
MKN-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07171
IZ in inferolateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.902847
hsa-miR-576-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
ZNF677	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.5319
MZ in dorsomedial parietal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.12074
RORC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.6674
PECAPJ15	CCLE Cell Line Gene CNV Profiles	1.0	2.20893
hsa-miR-4735-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
cuneate nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.32389
Adult acute lymphocytic leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.05
hsa-miR-4271	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
FOXD2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	55.146
hsa-miR-519e	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
ZNF680	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.3085
developmental process	GO Biological Process Annotations 2015	1.0	null
SNU489	CCLE Cell Line Gene CNV Profiles	1.0	1.37209
SOX13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.3306
CACO-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.824075
Motile cilium	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.328
orbital frontal cortex_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.12902
HT-115	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21926
CAL 27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03718
IZ in lateral temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.8134
hsa-miR-647	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
hsa-miR-4724-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
KE-37 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.62
posterior (caudal) superior temporal cortex (area 22c)_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.945786
hsa-miR-4699-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
COLO 320DM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.903242
496100367_FWM_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.00706
cerebellar cortex_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.993324
CEBPB	JASPAR Predicted Transcription Factor Targets	1.0	null
hsa-miR-4653-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
NFYA	JASPAR Predicted Transcription Factor Targets	1.0	null
MZ in midlateral extrastriate cortex (area 19)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.98955
PE01	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33471
peroxisome	LOCATE Predicted Protein Localization Annotations	1.0	null
cellular process	GO Biological Process Annotations 2015	1.0	null
JUN::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.0538
DMS 79	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.27928
cellular_component	GO Cellular Component Annotations 2015	1.0	null
hsa-miR-3605-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
SF268	CCLE Cell Line Gene CNV Profiles	1.0	1.74134
hsa-miR-3064-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.921135
496100420_PCx_probable Alzheimer's disease_no TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.68052
hippocampus (hippocampal formation)_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.940816
cellular developmental process	GO Biological Process Annotations 2015	1.0	null
JDP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	55.9652
hsa-miR-4710	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
orbital frontal cortex_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.27022
primary motor-sensory cortex (samples)_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.63149
G96	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07171
dorsolateral prefrontal cortex_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.92267
NUGC2	CCLE Cell Line Gene CNV Profiles	1.0	1.36143
FOSL2::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	63.0773
PE/CA-PJ15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.78651
ATM_KD_GSE54268_663_human_MCF-10A	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
skw3	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.624
hippocampus (hippocampal formation)_16 pcw_M_12287	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.30862
SG in ventrolateral prefrontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.942846
SOX8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.328
facial nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.53836
VZ in caudal subicular cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.08315
VENTX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.0882
PEER	CCLE Cell Line Gene CNV Profiles	-1.0	-1.43738
hsa-miR-944	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
MZ in primary visual cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.41593
hsa-miR-2110	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
496100460_TCx_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.11238
ZFP42	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.1478
496100520_HIP_no dementia_TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	9.28482
FOSL2::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	58.5956
TCF7L2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.3032
dorsal raphe nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.05244
FOS	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.049
layer III of rostral entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.36429
inferolateral temporal cortex (area TEv, area 20)_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.34792