association	dataset	threshold value	standardized value
IQGAP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.88009
Sox6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	40.3253
RELA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.5556
GSE136869_1_v_0_lpar2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE141726,GSE141733_1_v_0_angiotensin ii_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
MSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.9505
Dlx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	74.2217
PMC7794364-41540_2020_161_MOESM3_ESM.xlsx-U87MG_Unique_-_PPH2_predictions-Gene_Sym_SMAD9	Rummagene Transcription Factor Associations 2026	1.0	null
496100374_HIP_possible Alzheimer's disease_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.33452
ACP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.85563
Endocrine gland	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
GSE161864,GSE161866_0_v_2_ror2_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE126127_5_v_3_prmt1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE111660_4_v_3_prdm16_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
ERF::FIGLA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.5581
E2F4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.6425
Zfx	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	43.831
MTX3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.5489
Sperm plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.814
GSE126345_7_v_5_hcrt_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Female reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
MIXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.0452
Sox3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	71.7763
GSE173873_4_v_6_stra8_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE58724_3_v_4_oxymetholone_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
Dux	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	21.6335
GSE241036_0_v_1_ethanol_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
Stat5b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	46.0601
PBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.7778
LHX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.2386
FOS::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.4125
PKNOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.8253
LHX5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.8102
Ppara	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	73.8324
496100431_FWM_no dementia_TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.24622
GSE165548_2_v_13_gemcitabine_human	RummaGEO Drug Perturbation Signatures	1.0	null
DUS1L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52379
GSE158595_0_v_1_e4f1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE169571_3_v_2_dexamethasone_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
LBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.8793
GSE153064,GSE153065_1_v_2_hdac3_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
HOXB7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.8017
Zic1::Zic2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	58.761
PSRC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.48982
GSE169571_0_v_1_dexamethasone_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
Ascl2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	73.9766
POC1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51569
AFF3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.46554
RAX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.1637
GSE196671_5_v_1_obox4_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Rfx6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	43.6499
HOXD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.0399
Dlx5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	66.6394
FOSL1::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.022
GSE149075_1_v_9_foxa2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Ptf1a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	109.886
GSE94849_7_v_0_pinometostat_human	RummaGEO Drug Perturbation Signatures	1.0	null
NR4A1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.3541
RORC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.5097
GSE154074_5_v_0_bleomycin_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE118617,GSE118619_0_v_1_foxp1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Intracellular organelle	COMPARTMENTS Experimental Protein Localization Evidence Scores 2025	1.0	2.165
HOXA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.1011
Prdm5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	108.843
PMC11426526-ppat.1012555.s011.xlsx-DEG_MDDC_Jurkat_LPS_vs_MDDC_JK-Unnamed_5_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
S100A11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51074
Stat6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	59.9492
GSE210885_3_v_7_klf4_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Six4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	55.3155
HINT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78723
NPPC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.09419
GCNT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.01919
ATP5PO	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.76476
BRWD3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.67141
GSE112860_5_v_8_prdm16_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
9+2 motile cilium	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.533
VPS37D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95311
F8A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.52433
GSE199204,GSE211619_4_v_3_glutamine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE210770_0_v_1_foxp1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Nfe2l2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	28.9876
GSE129293_0_v_1_chd4_human	RummaGEO Gene Perturbation Signatures	1.0	null
Stat5a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	82.3137
chr9_34729993_G_A_b38	GTEx eQTL 2025	1.0	1.65213
FUT4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.66544
Vdr	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	42.498
MAP3K12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.62414
GSE126345_9_v_3_hcrt_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE169571_3_v_4_dexamethasone_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
HOXA6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.8136
Hoxd13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	68.8464
E2F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.3691
Yy1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	80.8034
GSE215351,GSE215794_2_v_3_kdm8_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Spermatozoon	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.474
GSE220813_0_v_1_zfp750_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Six3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	40.8439
496100352_FWM_no dementia_no TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.52387
Hoxa13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	74.3346
GSE248858_4_v_3_tcpobop_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
Cytoplasm	COMPARTMENTS Experimental Protein Localization Evidence Scores 2025	1.0	2.091
Msgn1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	74.0166
SEC16A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.97598
Internal male genital organ	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
GSE196671_5_v_8_obox4_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
ZNF454	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.22296
TAGLN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78441
TMTC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07501
CHTF8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.76378
VAX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.5731
Stat4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	78.4835
HNF4A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.7959
GSE98755,GSE98756_1_v_0_fbxl19_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
SKOR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.93502
Nr1h3::Rxra	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	86.5902
PMC12717993-MEC-34-e17796-s002.xlsx-ST12_WGS_RFMix_genes_2_anc-Unnamed_14_KLF6	Rummagene Transcription Factor Associations 2026	1.0	null
Erg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	66.5615
PMC4269325-NIHMS634665-supplement-supp_table4.xls-H3K27me3_TRIM37_KD-Unnamed_2_AR	Rummagene Transcription Factor Associations 2026	1.0	null
GSE111660_2_v_5_prdm16_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
FOSL1::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.6089
Foxf1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	29.2329
Nr5a2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	64.5719
GSE89032,GSE89033_0_v_1_sfpq_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
496100577_FWM_probable Alzheimer's disease_TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.64914
WM-115 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.843
GSE133213_9_v_15_znrf3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE112860_0_v_7_prdm16_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Spz1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.75
Hnf1a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	58.3283
membrane-bounded organelle	COMPARTMENTS Experimental Protein Localization Evidence Scores 2025	1.0	2.165
CD200	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.55404
Cornified envelope	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.203
GSE116354,GSE117379_2_v_4_cox2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE139987_1_v_2_rosiglitazone_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
Rxra	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	36.3852
PMC12616242-can-24-3452_supplementary_table_s2_suppst2.xlsx-Down_bins-Down_bins_loosing_H3K27me3_in_hpMSC-EWSR1_FLI1_FLI1	Rummagene Transcription Factor Associations 2026	1.0	null
NR3C2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.2974
ATP6V0D1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.23053
GSE211286_4_v_6_tcf12_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Tcf21	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	36.2464
Prdm15	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	27.5047
GSE216147_2_v_1_rbm20_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
J-82 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.134
Foxn1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	38.7507
Irf1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	138.876
EVX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.5498
GSE190186,GSE190188_8_v_5_apoe_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE70883,GSE71179_0_v_1_pbx1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Isl1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	48.5033
GSE205070_2_v_5_mertk_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Chronic inflammatory diseases (ankylosing spondylitis, Crohn's disease, psoriasis, primary sclerosing cholangitis, ulcerative colitis) (pleiotropy)	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.822185
GSE254848_4_v_13_ptges_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE181003_1_v_0_selinexor_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE213632_3_v_5_acod1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
CCZ1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.74446
Pou5f1::Sox2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	165.165
GSE58724_1_v_0_oxymetholone_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE148200_3_v_2_gemcitabine_human	RummaGEO Drug Perturbation Signatures	1.0	null
MEOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.4433
Arid5a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	66.9458
GSE137177_2_v_0_folic acid_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
GSE188870,GSE188871_0_v_5_kat7_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSTP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.87093
GSE123372,GSE123373_10_v_2_mecp2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE202434,GSE202438_10_v_1_talazoparib_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE69244_1_v_0_j147_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
PHF7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.82433
Nr2e1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	48.0801
Gata3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	79.149
HNF4G	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7121
GSE87404,GSE87812_1_v_3_hoxa9_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
BCL6B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.0165
GSE103068_5_v_7_volasertib_human	RummaGEO Drug Perturbation Signatures	1.0	null
Mafb	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	96.875
Hmx2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	57.5755
YAE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.5319
GSE58724_3_v_0_oxymetholone_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
Nobox	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	83.1316
HIF3A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.09506
GSE58724_1_v_4_oxymetholone_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
Dlx2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	66.2438
GSE164521_0_v_1_nitric oxide_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
ADAM17	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.1056
GSE70499_4_v_6_bmal1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Stat2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	164.064
CREBRF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96022
BATF::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.7759
TBX20	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12984
STN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.66008
GSE205070_2_v_7_mertk_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Nfatc2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	78.1544
GSE165636_0_v_4_tofacitinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
496100316_TCx_no dementia_TBI_79_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.25706
ETNK2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.84148
TLX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.9113
GSE152432_1_v_4_zrsr2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
RCHY1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60952
GSE188870,GSE188871_0_v_3_kat7_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE65617_5_v_3_aire_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
MEOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.7815
VSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.1133
GSE205070_2_v_9_mertk_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
496100571_FWM_dementia_TBI_81_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.59185
Msx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	82.6006
Lhx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	52.7371
AGAP5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.6201
GSE148200_4_v_2_gemcitabine_human	RummaGEO Drug Perturbation Signatures	1.0	null
EVX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.4074
RAX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.9445
LGALSL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.57105
Alx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	60.1683
ATN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.37464
496100495_FWM_no dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.33356
GSE228894_0_v_2_rnmt_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.3373
Stat5a::Stat5b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	69.8067
ARHGAP4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.37029
GSE169571_5_v_4_dexamethasone_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
Urogenital system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Male reproductive gland	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
CAMK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.57927
Nkx2-1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	39.2652
Reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Dynein axonemal particle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.104
Hmx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	81.6312
Arid3b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	43.2064
Pparg::Rxra	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	89.0349
GSE213153_1_v_0_ulixertinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
ARGFX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.1541
ZNF8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.6673
FBXO28	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.2558
GSE211286_4_v_3_tcf12_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE114992,GSE114993_9_v_5_irf5_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
PMC11772884-41421_2024_747_MOESM6_ESM.xlsx-7_DEGs_USF2-KO_vs_control-Gene_Symbol_USF2	Rummagene Transcription Factor Associations 2026	1.0	null
MAEL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.87154
496100405_TCx_probable Alzheimer's disease_no TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.56789
BNC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.842
NUDT11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.2198
GBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.1062
KIF12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.09943
Seminal plasma	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.981
Thap11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	34.4636
OTX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.7007
TCF7L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.2673
Nkx3-2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	50.4713
PMC11903305-41586_2024_8507_MOESM3_ESM.xlsx-Table_S1_MAF-Hugo_Symbol_MAF	Rummagene Transcription Factor Associations 2026	1.0	null
GSE200352_9_v_6_pparg_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE180200,GSE180201_2_v_0_qpctl_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
CLDN6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.18135
GSE146894_3_v_8_hira_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Dmbx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.9433
Lhx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	44.4714
GSE211126_3_v_0_hapln1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE143944_2_v_3_ribociclib_human	RummaGEO Drug Perturbation Signatures	1.0	null
NR3C1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.7754
VAX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.8493
Sperm fibrous sheath	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.193
HAND2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7473
Arid3a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	62.8519
GSE226316_4_v_2_tead2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.3517
Rarg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	157.787
Lef1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	86.6457
496100484_FWM_no dementia_no TBI_86_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.30622
ZNF845	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96376
GSE63048_11_v_8_morc1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
HOXD4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.3698
GSE148200_3_v_5_gemcitabine_human	RummaGEO Drug Perturbation Signatures	1.0	null
Testis	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
GSE88819_7_v_10_tug1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE201520_8_v_3_inhba_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
496100412_FWM_possible Alzheimer's disease_TBI_87_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.95479
MSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.2012
GSE151829,GSE151831_7_v_0_aire_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GATA4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.5084
GSE182921_0_v_1_slit2_human	RummaGEO Gene Perturbation Signatures	1.0	null
ZNF677	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.8374
HOXB3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.2348
C1orf216	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04149
Height	GWAS Catalog SNP-Phenotype Associations 2025	1.0	1.43979
GSE112995,GSE132079_1_v_0_ezh2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE179036_1_v_0_trim24_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE168458_1_v_3_disulfiram_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
Arx	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	54.0034
BARX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.7378
NOTO	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.7364
RORA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.0311
Outer dense fiber	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.321
Pax7	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	35.1568
GSE108675_3_v_0_slc1a4_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE224556,GSE224557_6_v_1_aire_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Shox2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	80.5448
SOX10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.4891
GSE211126_3_v_4_hapln1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE246461,GSE246463_5_v_0_mecp2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Flagellate	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.383
HL-7702 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.714
GSE138024_2_v_3_rgs4_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Foxl2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	46.706
GSE94849_3_v_2_pinometostat_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE101239_3_v_2_valproic acid_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
GSE240386,GSE242143_8_v_4_morc2_human	RummaGEO Gene Perturbation Signatures	1.0	null
GSE92457_9_v_10_ethanol_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
GSE180200,GSE180201_15_v_1_qpctl_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Peritubular contractile cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.635
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
BATF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.7242
FOSL2::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.6776
PMC4774101-13024_2016_87_MOESM3_ESM.xlsx-Table_S9-COMMON_DEGs_IN_AT_LEAST_3_OUT_OF_4_CONDITIONS_TCF23	Rummagene Transcription Factor Associations 2026	1.0	null
496100458_FWM_no dementia_no TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.25508
Lhx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	39.4
GSE199541_2_v_4_mbd2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
HOXA4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.3627
Hand1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	30.6111
NDUFS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.5249
GSE236003_1_v_3_ubr5_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSTK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57886
RCN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.00088
Sperm flagellum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.558
Spi1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	140.697
Gfi1b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.1204
GSE126345_9_v_10_hcrt_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GIPC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77349
THAP4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.33347
Transitional cell carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.788
FOS::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.459
MSX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.32543
GSE183335,GSE183351_1_v_0_lin28b_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE237040_6_v_1_notch3_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Gli2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	40.2456
GSE188870,GSE188871_1_v_3_kat7_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Alx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	65.7277
Bcl11b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	61.6941
GSE63048_11_v_6_morc1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Gonocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.615
GSE65617_2_v_3_aire_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
PBX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.7799
ALX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.12
496100411_FWM_no dementia_no TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.83593
Nr2f6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	91.5977
HOXB4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.6446
ZSCAN21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.1299
GSE241036_0_v_3_ethanol_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE188869,GSE188871_2_v_3_kat7_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Hand1::Tcf3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	64.6552
GSE126127_5_v_4_prmt1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Sox5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	59.0887
POU6F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.2382
Lhx8	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	68.3684
Nr1h4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	37.1282
Rarb	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	183.641
GSE171712_0_v_1_scgb1a1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.2641
Foxo3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	44.1974
Nfat5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	65.691
PMC11426526-ppat.1012555.s014.xlsx-DEG_DC_Jurkat_LPS_vs_DC_JK-Unnamed_5_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
RBPJ	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.7435
Organelle	COMPARTMENTS Experimental Protein Localization Evidence Scores 2025	1.0	2.165
496100317_FWM_no dementia_no TBI_81_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.04227
BBS12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.84468
nucleus	GO Cellular Component Annotations 2025	1.0	null
intracellular membrane-bounded organelle	GO Cellular Component Annotations 2025	1.0	null
BATF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.8646
TSC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.27181
IFFO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40232
PPP1R16B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.00698
GSE112860_3_v_4_prdm16_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Intracellular membrane-bounded organelle	COMPARTMENTS Experimental Protein Localization Evidence Scores 2025	1.0	2.165
E2F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.489
ZNF136	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.5845
ACSS3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.2007
Nfatc1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	39.2757
CRIP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51607
PLCD3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.27922
GSE114992,GSE114993_0_v_5_irf5_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
ALKBH2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.00212
NEUROD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.32131
Zic3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	80.0176
GSE103068_0_v_7_volasertib_human	RummaGEO Drug Perturbation Signatures	1.0	null
LM3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.605
Prdm14	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	65.2439
PDX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.4841
GSE147834_1_v_0_doxorubicin_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
GSE65617_5_v_1_aire_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Nr1h3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	56.3167
Dlx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	75.7549
Tbx6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	63.0211
Npas4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	31.5786
MAFA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.9534
CLIP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96647
GSE88819_1_v_8_tug1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE202603_3_v_2_bhlhe40_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE200352_10_v_6_pparg_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE171837_3_v_1_bortezomib_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
Sperm flagellum	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.633
Sox11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	93.4964
MAF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.3191
PMC13082837-NIHMS2159075-supplement-3.xlsx-DataTable5_Methylation_LMS-UCSC_RefGene_Name_TP63	Rummagene Transcription Factor Associations 2026	1.0	null
EN1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.1026
HOXA7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.0079
Gonad	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Neurod2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	72.4543
GSE241701_1_v_0_daxx_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Mecom	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	44.963
FOSB::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.4458
GSE164306_5_v_0_tsc1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
HRH3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.13004
COASY	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.11307
GSE147366_1_v_4_med13_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE214442_0_v_1_pak4_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
496100396_HIP_probable Alzheimer's disease_no TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.00783
ZNF675	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.4933
GSE128730_4_v_1_neratinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
Psp	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.917
ZNF75A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.3493
Flagellum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.422
Bach1::Mafk	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	38.7895
GSE104022_1_v_0_tamoxifen_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
OTUD5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.14525
Elf5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	46.2003
Dmrt1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	61.0019
E2F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.4672
Esrrg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	101.371
Sox1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	63.3091
Zfp809	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	54.5832
GSE123372,GSE123373_1_v_2_mecp2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Runx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	65.82
GSE216273,GSE216292_14_v_2_palbociclib_human	RummaGEO Drug Perturbation Signatures	1.0	null
Ikzf3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	61.612
GSE139987_1_v_0_rosiglitazone_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
Male reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
HOXB5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7463
GSE114992,GSE114993_7_v_5_irf5_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
496100401_FWM_probable Alzheimer's disease_TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.1139
GSE103068_0_v_3_volasertib_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE216273,GSE216292_0_v_2_palbociclib_human	RummaGEO Drug Perturbation Signatures	1.0	null
NKX2-8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.79801
496100494_HIP_no dementia_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.02016
LHX9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.4365
PMC11426526-ppat.1012555.s014.xlsx-DEG_DC_C91-PL_LPS_vs_DC_Jurkat-Unnamed_5_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
ELF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7584
FOSL2::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.6995
Creb5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	34.4108
ZNF418	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.1872
GSE235945_1_v_0_pikfyve_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE158431_5_v_7_pioglitazone_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
SEC61A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.81406
GSE113106_2_v_1_dnm2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Hmga1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	102.591
Zic2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	103.566
TUFM	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.14783
POU1F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.6335
SOX21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.3601
Golgi apparatus	COMPARTMENTS Experimental Protein Localization Evidence Scores 2025	1.0	2.091
EMX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.832
Atoh1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	68.6251
SCAP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.5748
IRF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.1972
GSE119701_0_v_1_phf7_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE155830_1_v_0_fkbp5_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
PRRX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.7488
ABHD17B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.77244
GSE145915_0_v_1_pcm1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE211126_1_v_0_hapln1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GATA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.4699
GSE145915_3_v_2_pcm1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
496100334_PCx_probable Alzheimer's disease_no TBI_79_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.15184
Foxj2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	77.4771
GSE125007,GSE125008_6_v_0_uhrf1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE113106_2_v_4_dnm2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Plagl1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	36.5053
PMC7794364-41540_2020_161_MOESM3_ESM.xlsx-NSP_Unique_-_PPH2_predictions-Gene_Sym_SMAD9	Rummagene Transcription Factor Associations 2026	1.0	null
GSE159084_0_v_1_dexamethasone_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
GSE210885_5_v_7_klf4_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE114992,GSE114993_1_v_5_irf5_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
KCTD6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.70334
GSE87404,GSE87812_1_v_0_hoxa9_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE199255,GSE199356_4_v_5_pds5a_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Nr1h2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	80.3119
GSE101546_3_v_5_setdb1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Hoxa11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	29.7103
DLX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.5974
Nr5a1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	98.1182
NGFR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63267
CSRP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75291
Sperm principal piece	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.494
GSE248659_1_v_0_klf5_human	RummaGEO Gene Perturbation Signatures	1.0	null
GSE148252_2_v_6_npas4_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.1439
Hmx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	70.064
HOXA3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.6288
NKX6-1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.3265
Ar	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	113.105
Sperm connecting piece	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.65
Female reproductive gland	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
MLKL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.83276
Rhox11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	36.6893
GSE92457_9_v_12_ethanol_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
SLC18B1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78651
GSE153137,GSE153140_2_v_0_mettl5_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE210885_2_v_1_klf4_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Mafg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	29.6779
PWWP2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.7444
SOX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.5222
HOXC4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.1456
GSE171837_0_v_3_bortezomib_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
LCMT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.99876
SELENON	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60743
ANKRD65	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91072
Zfp335	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	60.75
FOXN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.16462
GSE149264,GSE149267_2_v_1_trp53_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
HOXC8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.7623
Endomembrane system	COMPARTMENTS Experimental Protein Localization Evidence Scores 2025	1.0	2.091
Hic1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	27.0002
GSE216273,GSE216292_0_v_8_palbociclib_human	RummaGEO Drug Perturbation Signatures	1.0	null
Acrosomal vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.254
Sox17	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	85.6126
Nucleus	COMPARTMENTS Experimental Protein Localization Evidence Scores 2025	1.0	2.165
GSE103068_5_v_4_volasertib_human	RummaGEO Drug Perturbation Signatures	1.0	null
ZKSCAN1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.718
UNCX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.002
FOSL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.7649
GSE101546_3_v_4_setdb1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
ETV7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.3053
Whole body	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Foxo1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	43.2501
GSE239747_1_v_3_lrp6_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
EMX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.9119
GSE253799_0_v_1_matn3_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE103068_0_v_4_volasertib_human	RummaGEO Drug Perturbation Signatures	1.0	null
MID1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.06925
GSE70499_5_v_6_bmal1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE169571_0_v_2_dexamethasone_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE188870,GSE188871_0_v_2_kat7_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Prdm4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	44.5021
NKX6-2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.7724
Motile cilium	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.344
POU2F1::SOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.1329
GSE202434,GSE202438_6_v_1_talazoparib_human	RummaGEO Drug Perturbation Signatures	1.0	null
Foxj3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	88.0928
ARTN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.01491
LZTS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83518
GSE87404,GSE87812_2_v_0_hoxa9_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
RIOX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.49196
HOXA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.4037
FOSL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.556
DVL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.11516
PEPD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86401
VSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.4635
Gli1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	54.027
HOXA5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.4504
Gland	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
SEMA4C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.23244
UBE2O	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8098
GSE210885_2_v_4_klf4_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE146074_9_v_7_ly6e_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Smad4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	56.792
Sox7	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	82.8227
ISX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.774
Atf1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	22.2006
GSE241036_4_v_2_ethanol_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
PDCD11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36035
GSE211126_1_v_4_hapln1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Nr2e3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	70.913
HOXB2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.7383
RXRA::VDR	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9
PMC8684775-CTM2-11-e640-s002.xlsx-Sheet1-Table_S3_MAF_file_of_the_CCS_samples_MAF	Rummagene Transcription Factor Associations 2026	1.0	null