association	dataset	threshold value	standardized value
MDAMB231	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.19501
BRD-K15694916	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.8619
cycle	GeneRIF Biological Term Annotations	1.0	null
beta-escin-3890	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K00243272	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.20482
BRD-K64264263	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.04056
NU-DUL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28656
CUX1	ChEA Transcription Factor Targets	1.0	null
mayerrokitanskykusterhauser	GeneRIF Biological Term Annotations	1.0	null
drosophila	Phosphosite Textmining Biological Term Annotations	1.0	null
giant cell tumor cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.525166
JHH2	CCLE Cell Line Gene CNV Profiles	1.0	2.11344
remodeling	Phosphosite Textmining Biological Term Annotations	1.0	null
cell part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.585942
Sarcoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.332
COR-L279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09193
LY-294002-2687	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K81206010	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.51983
BRD-K79355381	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.91037
SG in temporal polar cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.53839
Ovarian cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.593
Autosomal genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.277
BRD-K64860451	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.39617
BRD-A62469171	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.44934
deep layers of caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.14683
LXFL529	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
Adult Germ Cell Tumor	DisGeNET Gene-Disease Associations	1.0	null
BRD-K78902613	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.55575
planum polare, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.1213
Disease of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.185
Hypogonadism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.512
BRD-K25773863	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.08979
CSNK2A1	Hub Proteins Protein-Protein Interactions	1.0	null
SG in inferolateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.58332
testis	HPA Tissue Protein Expression Profiles	1.0	0.917838
HS 895.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.940534
sertoli cell tumor	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.672324
gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.05237
Mayer-Rokitansky-Kuster-Hauser syndrome type 2	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.452
16247463-Table2	GeneSigDB Published Gene Signatures	1.0	null
BRD-K39981110	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.17582
BRD-K63119190	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.19171
Testicular germ cell cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.46
possible	GeneRIF Biological Term Annotations	1.0	null
BRD-K33204746	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.05001
cerebellum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.065958
rapid	GeneRIF Biological Term Annotations	1.0	null
intracellular organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.634586
kidney disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.053938
CI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04054
samples	GeneRIF Biological Term Annotations	1.0	null
progrowth	GeneRIF Biological Term Annotations	1.0	null
NCI-H2087	GDSC Cell Line Gene Expression Profiles	-1.0	-2.18787
CL-34	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.044
BRD-K19103068	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.26539
GP2D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.940534
Gonadal dysgenesis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.83
sex cord-stromal neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.406425
HCC1482	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.942006
BRD-K94790210	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.40006
BRD-K76788397	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.59414
Cell type benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.286
inner SZ in superolateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.07289
786O	CCLE Cell Line Gene CNV Profiles	1.0	1.42813
ZBTB33	ENCODE Transcription Factor Targets	1.0	null
olfactory bulb	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.94976
paraventricular nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.14552
intracellular	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.608663
interact	GeneRIF Biological Term Annotations	1.0	null
WM-115	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14437
BRD-K41306114	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.25202
Monogenic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.411
Embryonal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.833
USF1	ENCODE Transcription Factor Targets	1.0	null
UKE-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.044
Frasier syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.044
Appendix	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.23965
Brain Lower Grade Glioma_LGG_TCGA-HT-7690-01A-11R-2256-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K06611347	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.82316
M059J	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.38241
BRD-K16304302	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.91058
721_B_lymphoblasts	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.12613
Liver hepatocellular carcinoma_LIHC_TCGA-2Y-A9GS-01A-12R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
U-266	GDSC Cell Line Gene Expression Profiles	1.0	3.11867
Hepatobiliary disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.274
intracellular organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
Head and Neck squamous cell carcinoma_HNSC_TCGA-BA-5152-01A-02R-1873-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KMS21BM	CCLE Cell Line Gene CNV Profiles	-1.0	-1.82094
sex chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.68482
PMC4804643-13014_2016_623_MOESM2_ESM.xlsx-MI_GENES-ID_MITF	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-K52731958	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.23077
nucleus subceruleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.857301
prader-willi syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.222136
gonadoblastoma	GeneRIF Biological Term Annotations	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-HT-7467-01A-11R-2027-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
tandem	GeneRIF Biological Term Annotations	1.0	null
sertoli	GeneRIF Biological Term Annotations	1.0	null
dentate nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.01157
MFM-223	GDSC Cell Line Gene Expression Profiles	-1.0	-1.64722
superficial layers of olfactory entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.37579
BRD-K09903493	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.61633
betulinic acid-4101	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
elongating	GeneRIF Biological Term Annotations	1.0	null
Mesothelioma_MESO_TCGA-SH-A7BD-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K44416503	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.13162
BRD-K70594121	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.40788
Partial androgen insensitivity syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.324
downregulates	GeneRIF Biological Term Annotations	1.0	null
NCI-H1048	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04054
BRD-K00676343	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.03693
SK-N-AS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14437
BRD-K13038935	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.28021
collagen type vi trimer	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.44052
kinase	GeneRIF Biological Term Annotations	1.0	null
CUX1-19635798-MULTIPLE HUMAN CANCER CELL TYPES-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
spermatogenesis	GeneRIF Biological Term Annotations	1.0	null
precentral gyrus, right, bank of the central sulcus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.90186
BRD-K82674931	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.58057
SNU886	CCLE Cell Line Gene CNV Profiles	1.0	1.40848
BRD-K80424876	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.05821
germ cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.59622
male infertility	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.25428
prostate cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.664368
Seminoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.453
ARNT_01_315	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.59408
NFKB1	JASPAR Predicted Transcription Factor Targets	1.0	null
marker	GeneRIF Biological Term Annotations	1.0	null
women	GeneRIF Biological Term Annotations	1.0	null
BRD-K87386611	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.38861
HEC265	CCLE Cell Line Gene CNV Profiles	-1.0	-1.63726
Down syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.748
chromosomal	GeneRIF Biological Term Annotations	1.0	null
BRD-K07536006	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.21679
reproductive organ benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.094303
BRD-K61027868	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.10389
inner SZ in medial temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.971437
intracellular organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.260566
ck2	Phosphosite Textmining Biological Term Annotations	1.0	null
fastigial nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.44949
neoplastic	GeneRIF Biological Term Annotations	1.0	null
PE/CA-PJ15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09193
rostral division of OFCi (area 11)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.07113
NCI-H2106	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.11327
amrinone-2724	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
affected	GeneRIF Biological Term Annotations	1.0	null
limitans nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.957041
efficiency	GeneRIF Biological Term Annotations	1.0	null
Extragonadal seminoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.565
endocrine system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.070665
carried	GeneRIF Biological Term Annotations	1.0	null
homologue	GeneRIF Biological Term Annotations	1.0	null
Carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.612
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A43Y-01A-21R-A26T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Partial Chromosome Y Deletion	DisGeNET Gene-Phenotype Associations	1.0	null
inform	GeneRIF Biological Term Annotations	1.0	null
PMC10709143-41556_2023_1271_MOESM9_ESM.xls-Up_in_PAX7--Target_name_PAX7	Rummagene Transcription Factor Associations 2026	1.0	null
albendazole-oxide	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.13728
Swyer Syndrome	DisGeNET Gene-Disease Associations	1.0	null
Rectum adenocarcinoma_READ_TCGA-AG-3731-01A-11R-1736-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K35209334	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.12978
most	GeneRIF Biological Term Annotations	1.0	null
female reproductive gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
brain stem	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.057689
intracellular organelle	LOCATE Curated Protein Localization Annotations	1.0	null
metencephalon	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.064768
Organ system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.891
BRD-K10135449	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.89661
BRD-K38431962	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	5.55092
dna	GeneRIF Biological Term Annotations	1.0	null
y chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.89939
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.948991
proliferation	GeneRIF Biological Term Annotations	1.0	null
genetic	GeneRIF Biological Term Annotations	1.0	null
post	GeneRIF Biological Term Annotations	1.0	null
subgranular zone of rostral dentate gyrus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.60904
NCIH1651	CCLE Cell Line Gene CNV Profiles	1.0	2.28529
lateral hypothalamic area, anterior region, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	3.20538
outer CP in caudal perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.12106
gonad	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.74725
intracellular organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
BRD-K03791970	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.24736
BRD-A48228341	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.04176
ZBTB33_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K34797601	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-5.45855
whole plant	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053394
liver carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.312464
BRD-K98320707	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.37063
caudal subdivision of medial nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.896788
germ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.494136
BRD-K72060858	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.01426
BRD-K06220918	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.66943
dorsal lateral geniculate nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.35064
whole body	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
BRD-K47794327	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.28697
pre-eclampsia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.684
reproductive system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
Alveoli adenoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.151
chromatin	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.262025
BRD-K29756429	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.0131
acute kidney failure	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.157765
situ	GeneRIF Biological Term Annotations	1.0	null
WholeBlood	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.23739
pineal gland	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.50371
BRD-K80739863	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.16764
sox	GeneRIF Biological Term Annotations	1.0	null
embryonic stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.351856
GOS3	CCLE Cell Line Gene CNV Profiles	1.0	1.9672
transcriptional	GeneRIF Biological Term Annotations	1.0	null
MDA MB435	BioGPS Cell Line Gene Expression Profiles	1.0	1.67871
BRD-K34028745	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.20412
integument	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054662
BRD-K61795707	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.57048
BRD-K02190643	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.79841
Breast Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
Musculoskeletal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.255
hsa-miR-1914	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
provided	GeneRIF Biological Term Annotations	1.0	null
Denys-Drash syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.418
BRD-K87743988	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.14232
TFAP2A	JASPAR Predicted Transcription Factor Targets	1.0	null
647V	CCLE Cell Line Gene CNV Profiles	1.0	1.54994
MKN7	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36578
BRD-K10433727	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.35994
BRD-K78741913	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.07798
macromolecular complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.042371
Lower respiratory tract disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.05
DMS 454	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.865206
SP in lateral temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.26512
cervicovaginal fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.327896
BRD-K63270352	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.19238
silencing	GeneRIF Biological Term Annotations	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-VW-A8FI-01A-11R-A36H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hepatocellular	GeneRIF Biological Term Annotations	1.0	null
BRD-K19752998	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01456
BRD-K89338336	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.9881
egg	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.38552
SK-OV-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4498
IPC-298	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
BDCA4+_DentriticCells	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-2.30446
BRD-K12826618	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.48504
Granulosa cell tumor	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.36
Polycystic Ovary Syndrome_Skeletal muscle_GSE6798	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.51952
IM-95M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
peripheral blood	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.25858
Placenta accreta	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.14
Disorder of sexual development	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.639
GDM1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.40781
BRD-K32176914	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.51993
metacetamol	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.27801
Choriocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.593
BRD-K90697690	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.19679
urogenital system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-DU-A76O-01A-11R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K27229533	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	5.26302
hsa-miR-4680-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
Placenta disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.577
SZ in posterior parahippocampal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.25046
BRD-K42987166	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.75008
finnish	GeneRIF Biological Term Annotations	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-HT-8564-01A-11R-2404-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K96057608	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.08405
basomedial nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.88196
Brain Lower Grade Glioma_LGG_TCGA-HT-7856-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-A11814108	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.29617
female reproductive gland	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
prophase	GeneRIF Biological Term Annotations	1.0	null
ovary epithelial cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.106294
BRD-A84816049	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.16
metyrapone-4606	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
gland	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
BRD-K07988588	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.14763
Steroid inherited metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.893
parasubicular cortex (parasubiculum)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.13396
organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
introducing	GeneRIF Biological Term Annotations	1.0	null
straightforward	GeneRIF Biological Term Annotations	1.0	null
BRD-K14255526	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.65656
BRD-K47584662	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.45609
variant	GeneRIF Biological Term Annotations	1.0	null
BRD-K71671197	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.11784
BRD-K78088874	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.15415
Brain Lower Grade Glioma_LGG_TCGA-S9-A6U9-01A-11R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
strong	GeneRIF Biological Term Annotations	1.0	null
gastrointestinal system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.270464
PMC10528072-NIHMS1928302-supplement-5.xlsx-ASCL1-target_genes-ABAT_ASCL1	Rummagene Transcription Factor Associations 2026	1.0	null
organ system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.500379
allow	GeneRIF Biological Term Annotations	1.0	null
RPMI 8226	BioGPS Cell Line Gene Expression Profiles	1.0	0.948101
BRD-K22478004	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.37313
KPNSI9S	CCLE Cell Line Gene CNV Profiles	1.0	1.56738
lasalocid-3021	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CA46	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
Hepatocellular carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.274
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A3AB-06A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
nested	GeneRIF Biological Term Annotations	1.0	null
proposed	GeneRIF Biological Term Annotations	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-39-5021-01A-01R-1443-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
non-membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.750452
BRD-K18623962	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.54154
translation	GeneRIF Biological Term Annotations	1.0	null
combination	GeneRIF Biological Term Annotations	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-TQ-A7RR-01A-21R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
male reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
degradation	Phosphosite Textmining Biological Term Annotations	1.0	null
forms	GeneRIF Biological Term Annotations	1.0	null
BRD-K77591784	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.26614
BRD-K24748087	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.40038
COR-L279	GDSC Cell Line Gene Expression Profiles	1.0	2.37571
HIST2H2BE	Pathway Commons Protein-Protein Interactions	1.0	null
BRD-K27476975	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.18144
Urinary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.074
female reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.050799
NAMALWA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04054
RXRA_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K52476750	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.03332
tspx	GeneRIF Biological Term Annotations	1.0	null
184A1N4	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.29052
BRD-K43922968	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.07625
624 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.18996
KNS42	CCLE Cell Line Gene CNV Profiles	-1.0	-1.68043
they	GeneRIF Biological Term Annotations	1.0	null
factors	GeneRIF Biological Term Annotations	1.0	null
reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.42368
CORL47	CCLE Cell Line Gene CNV Profiles	1.0	1.56556
BRD-K87781745	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.17921
primordium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.808551
nervous	GeneRIF Biological Term Annotations	1.0	null
choroid plexus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.35743
oculomotor nuclear complex, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.859485
urogenital system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.34496
intracellular membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
residue	GeneRIF Biological Term Annotations	1.0	null
superficial layers of caudal presubiculum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.857639
HEC108	CCLE Cell Line Gene CNV Profiles	-1.0	-1.78066
number	GeneRIF Biological Term Annotations	1.0	null
Reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.296
Edinger-Westphal nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.39097
droperidol-4629	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Uterine cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.143
KRAS.600.LUNG.BREAST_UP.V1	MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations	1.0	null
BRD-K67905771	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.41854
dimorphisms	GeneRIF Biological Term Annotations	1.0	null
stratum pyramidale of rostral CA1	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.24198
CCRT CEM	BioGPS Cell Line Gene Expression Profiles	1.0	2.41625
LS180	CCLE Cell Line Gene CNV Profiles	-1.0	-1.74039
mixed gonadal dysgenesis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.872872
internal male genital organ	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
Prostate cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.722
Beta thalassemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.029
BRD-K42671261	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.02007
BRD-K21753319	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.10668
fluorescence	GeneRIF Biological Term Annotations	1.0	null
Liver disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.286
BRD-K02241673	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.40297
critical	GeneRIF Biological Term Annotations	1.0	null
BRD-K86630280	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.59519
sry	GeneRIF Biological Term Annotations	1.0	null
Asthma_Epithelial Cell_GSE4302	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.44076
Disease of metabolism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.114
CL-40	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
BRD-K32370845	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.62029
Brain Lower Grade Glioma_LGG_TCGA-DB-5275-01A-01R-1470-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ovarian cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.069029
superior frontal gyrus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.23975
BRD-A89554862	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.22862
inferior olive, medial nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.21538
du-145 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.293151
ZR751	CCLE Cell Line Gene CNV Profiles	-1.0	-2.17087
CHP-134	GDSC Cell Line Gene Expression Profiles	1.0	1.88738
BRD-K03902845	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.83895
NCIH460	CCLE Cell Line Gene CNV Profiles	1.0	1.33604
specific	GeneRIF Biological Term Annotations	1.0	null
Oligospermia	HuGE Navigator Gene-Phenotype Associations	1.0	null
BRD-K26217579	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.3369
BRD-A72515205	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.08588
USF1	JASPAR Predicted Transcription Factor Targets	1.0	null
laterodorsal part of putamen	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-3.03857
Adult Liver Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
transformation	GeneRIF Biological Term Annotations	1.0	null
hybridization	GeneRIF Biological Term Annotations	1.0	null
seminomas	GeneRIF Biological Term Annotations	1.0	null
intracellular part	LOCATE Predicted Protein Localization Annotations	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-AS-3777-01A-01R-0864-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Dysgerminoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.794
A-427	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.97372
BRD-K50271780	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.75185
fertility	GeneRIF Biological Term Annotations	1.0	null
BJAB	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04054
Bladder Urothelial Carcinoma_BLCA_TCGA-GU-A42P-01A-11R-A23W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
gonad	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
pregnancies	GeneRIF Biological Term Annotations	1.0	null
contributed	GeneRIF Biological Term Annotations	1.0	null
BRD-K54751293	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.02479
SOX11-23321250-Z138-A519-JVM2-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
chromatin	Phosphosite Textmining Biological Term Annotations	1.0	null
Mullerian Aplasia	DisGeNET Gene-Disease Associations	1.0	null
BRD-K22668106	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.107
couples	GeneRIF Biological Term Annotations	1.0	null
taken	GeneRIF Biological Term Annotations	1.0	null
roles	GeneRIF Biological Term Annotations	1.0	null
hindbrain	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.060522
BRD-K29745629	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.47209
KRAS.600_UP.V1	MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations	1.0	null
VIIB	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.879875
HS 746T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33072
male reproductive gland	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
potentiates	GeneRIF Biological Term Annotations	1.0	null
tissues, cell types and enzyme sources	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.992379
urinary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.048604
paracentral lobule, posterior part, right, lateral bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.44692
fallopian tube	GTEx Tissue Gene Expression Profiles	1.0	0.881071
kidney failure	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.129965
SP in medial temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.944797
inner portion of lateral ganglionic eminence	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.0106
Juvenile type testicular granulosa cell tumor	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.613
BRD-K15174326	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.75428
extracellular region part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.045601
Klinefelter syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.998
Primary immunodeficiency disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.035
Dysgerminoma	DisGeNET Gene-Disease Associations	1.0	null
BRD-K39087188	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.31405
abducens nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.901233
testisspecific	GeneRIF Biological Term Annotations	1.0	null
medial subdivision of central nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.27516
medial parabrachial nucleus,right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.01374
A-VN-1203-2004(H5N1)_Day1-10^3pfu_22074594_GSE33263	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-2.00449
CSNK2A1	Pathway Commons Protein-Protein Interactions	1.0	null
intracellular membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
der	GeneRIF Biological Term Annotations	1.0	null
Respiratory system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.053
cyclindependent	GeneRIF Biological Term Annotations	1.0	null
Achondroplasia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.211
endocrine gland	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
BRD-K14756138	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.11936
Uterine disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.272
vestibular nuclei, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	2.13453
COLO 794	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.850426
identifying	GeneRIF Biological Term Annotations	1.0	null
gonad	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
rostral ventral respiratory cell group	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.19669
Chromosome Deletion	HuGE Navigator Gene-Phenotype Associations	1.0	null
process	GeneRIF Biological Term Annotations	1.0	null
BRD-K52175660	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.13419
directing	GeneRIF Biological Term Annotations	1.0	null
capable	GeneRIF Biological Term Annotations	1.0	null
SK-MES-1	GDSC Cell Line Gene Expression Profiles	1.0	1.92881
HCC1534	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
U343	CCLE Cell Line Gene CNV Profiles	1.0	1.84406
hypogonadism	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.275089
untranslated	GeneRIF Biological Term Annotations	1.0	null
cellonly	GeneRIF Biological Term Annotations	1.0	null
BRD-K25866212	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.51442
Brain Lower Grade Glioma_LGG_TCGA-S9-A6WG-01A-11R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lipid metabolism disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.13
hydroxytoluic-acid	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-5.11987
STAT1	ChEA Transcription Factor Targets	1.0	null
Bipolar Disorder_frontal cortex_GSE5389	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.72268
diagnosis	GeneRIF Biological Term Annotations	1.0	null
BRD-K38240683	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.0239
17-beta hydroxysteroid dehydrogenase 3 deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.047
Congenital bilateral absence of vas deferens	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.105
exon	GeneRIF Biological Term Annotations	1.0	null
HS 839.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
RT-112	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04054
trochlear nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.879189
BRD-K85727265	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.50112
candidate	GeneRIF Biological Term Annotations	1.0	null
autosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.280716
viscus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.050471
WSU-NHL	GDSC Cell Line Gene Expression Profiles	1.0	1.86766
detected	GeneRIF Biological Term Annotations	1.0	null
EB1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.940534
MZ in posterodorsal (superior) parietal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.10733
emboliform nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.855021
intracellular part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
dermatofibroma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.523982
male reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.836017
stimulating	GeneRIF Biological Term Annotations	1.0	null
BRD-K12864860	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.05423
COV504	CCLE Cell Line Gene CNV Profiles	-1.0	-2.06874
dependent	GeneRIF Biological Term Annotations	1.0	null
risk	GeneRIF Biological Term Annotations	1.0	null
BRD-K54456668	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	5.01722
Disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.073
HCC4011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.825506
BRD-K51461946	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.58506
IZ in midlateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.2553
BRD-K78712486	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.27251
cell part	LOCATE Curated Protein Localization Annotations	1.0	null
Skin	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.839833
casein	Phosphosite Textmining Biological Term Annotations	1.0	null
rat	GeneRIF Biological Term Annotations	1.0	null
BRD-K86019347	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.12575
BRD-K90697694	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.31488
superior olivary complex, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.18794
gelsemine-4097	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
besides	GeneRIF Biological Term Annotations	1.0	null
mammillary body, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.852349
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.890909
tumorigenesis	GeneRIF Biological Term Annotations	1.0	null
BRD-K50146767	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.43289
EFO-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04054
BRD-A38066207	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.18637
BRD-K84518331	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.09911
KMS-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.28879
BRD-K68450812	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.23334
laterorostral part of entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.93027
gonadoblastoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	2.66337
wortmannin-389	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
AR	Pathway Commons Protein-Protein Interactions	1.0	null
Autosomal dominant adult-onset proximal spinal muscular atrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.178
SCC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
SNU1076	CCLE Cell Line Gene CNV Profiles	1.0	2.84764
BRD-K44696459	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.33822
nucleosome	GeneRIF Biological Term Annotations	1.0	null
BRD-K96198015	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.82222
COV318	CCLE Cell Line Gene CNV Profiles	-1.0	-1.76557
BRD-K24561725	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.15155
LN18	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.42864
evaluate	GeneRIF Biological Term Annotations	1.0	null
OV56	CCLE Cell Line Gene CNV Profiles	-1.0	-1.37419
HCC2935	CCLE Cell Line Gene CNV Profiles	1.0	1.41951
synthesis	GeneRIF Biological Term Annotations	1.0	null
reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
trichostatin A-3058	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
cell-line-tumor	Phosphosite Textmining Biological Term Annotations	1.0	null
vaginal epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.36526
hypophysis	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.077579
BRD-K50036850	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.3044
Esophagus - Gastroesophageal Junction	GTEx Tissue Gene Expression Profiles 2023	1.0	7.21239
CP in caudal hippocampus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.12627
Brain Lower Grade Glioma_LGG_TCGA-HT-A614-01A-11R-A29R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
complicated	GeneRIF Biological Term Annotations	1.0	null
Placental Insufficiency	DisGeNET Gene-Disease Associations	1.0	null
Testicular sex cord-stromal neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.362
male reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.62207
Reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.01
Small Testicle	DisGeNET Gene-Phenotype Associations	1.0	null
BRD-K40612106	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.18362
mild	GeneRIF Biological Term Annotations	1.0	null
Liver And Intrahepatic Biliary Tract Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
codon	GeneRIF Biological Term Annotations	1.0	null
membrane-bounded organelle	LOCATE Curated Protein Localization Annotations	1.0	null
BRD-K67096761	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.56929
Multiple Chronic Conditions	DisGeNET Gene-Disease Associations	1.0	null
A-VN-1203-2004(H5N1)_Day1-10^2pfu_22074594_GSE33263	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.85455
inner CP in posteror frontal cortex (motor cortex)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.0012
BRD-K45112293	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.31936
MCF 10A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
Male reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.24
RERF-LC-KJ	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.825506
Patau syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.758
Ovarian small cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.109
BRD-K21786986	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.07924
Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5894-01A-11R-1592-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cell part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
intracellular part	LOCATE Curated Protein Localization Annotations	1.0	null
spermatid	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.01112
membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
germ cell cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.02524
Hypogonadotropic hypogonadism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.261
SG in rostral perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.0348
STAT1-20625510-HELA-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
oncogenic	GeneRIF Biological Term Annotations	1.0	null
SK-MM-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4498
BRD-K05228434	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.3732
activities	GeneRIF Biological Term Annotations	1.0	null
ovarian disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.116606
SU-DHL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.11327
semen	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.04533
BRD-K24471810	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.27481
Spermatogenic failure	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.573
JUND_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cuneus, right, peristriate	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-2.1608
Brain Lower Grade Glioma_LGG_TCGA-DH-A669-01A-12R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SG in rostral entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.00747
encode	GeneRIF Biological Term Annotations	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-S9-A7QZ-01A-12R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
male reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.6141
CD56+_NKCells	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.12639
infertile	GeneRIF Biological Term Annotations	1.0	null
ylinked	GeneRIF Biological Term Annotations	1.0	null
Varicocele	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.388
SG in midlateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.91631
nucleus	GO Cellular Component Annotations 2023	1.0	null
reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.04377
female	GeneRIF Biological Term Annotations	1.0	null
BFTC-905	GDSC Cell Line Gene Expression Profiles	-1.0	-2.07009
BRD-K44027058	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.29756
vagina	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.364886
ATN-1	GDSC Cell Line Gene Expression Profiles	1.0	1.86276
nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052121
SG in primary somatosensory cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.88543
BRD-K34158806	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.66947
BRD-K41604824	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.48573
BRD-K94962942	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.71805
Brain germinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.755
epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053969
furazolidone-3019	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
intracellular	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
BRD-K25645002	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.24249
family	GeneRIF Biological Term Annotations	1.0	null
cell	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.585942
tgcts	GeneRIF Biological Term Annotations	1.0	null
support	GeneRIF Biological Term Annotations	1.0	null
extracellular	GeneRIF Biological Term Annotations	1.0	null
inner CP in midlateral extrastriate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.833391
transverse gyri, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.39386
nucleus	LOCATE Predicted Protein Localization Annotations	1.0	null
Primary ovarian insufficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.517
inner CP in temporal polar cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.43097
gonadal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.348246
men	GeneRIF Biological Term Annotations	1.0	null
184B5	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.493165
SUM 159PT	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.940534
NCIH810	CCLE Cell Line Gene CNV Profiles	1.0	1.33221
latamoxef-3028	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Mayer-Rokitansky-Kuster-Hauser syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.643
out	GeneRIF Biological Term Annotations	1.0	null
body of caudate	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.991097
EEF1A1	Pathway Commons Protein-Protein Interactions	1.0	null
testis	GeneRIF Biological Term Annotations	1.0	null
BRD-K77953978	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.38188
whole body	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Liver Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-43-6143-01A-11R-1820-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-HT-7873-01B-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K84334677	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.11509
Adult hepatocellular carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.31
Amenorrhea	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.552
BRD-K15160749	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.06563
apoptotic	GeneRIF Biological Term Annotations	1.0	null
occipito-temporal gyrus, left, superior bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.995303
layer III of caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.01223
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
MCF12A	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.773894
BRD-K18454119	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.41038
malignant teratoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.430017
certain	GeneRIF Biological Term Annotations	1.0	null
who	GeneRIF Biological Term Annotations	1.0	null
BRD-K96758498	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.11637
cytoplasm	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
VZ in caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.20708
inactivating	GeneRIF Biological Term Annotations	1.0	null
outer plexiform zone in extrastriate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.51797
BRD-K94385157	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.3532
daughter	GeneRIF Biological Term Annotations	1.0	null
slightly	GeneRIF Biological Term Annotations	1.0	null
E2F1	JASPAR Predicted Transcription Factor Targets	1.0	null
Dysgerminoma of ovary	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.632
hsa-miR-3140-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
harboring	GeneRIF Biological Term Annotations	1.0	null
SU-DHL-6	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14833
NCI-H2461	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.4105
HMY-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.825095
grgr	GeneRIF Biological Term Annotations	1.0	null
gametocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.19462
Brain Lower Grade Glioma_LGG_TCGA-DB-A64V-01A-11R-A29R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SZ in medial temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.946966
RXRA	ENCODE Transcription Factor Targets	1.0	null
gene-expression-regulation	Phosphosite Textmining Biological Term Annotations	1.0	null
anterior orbital gyrus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.48832
earliest	GeneRIF Biological Term Annotations	1.0	null
BRD-K73669270	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.56959
inner CP in rostral perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.11294
microenvironment	GeneRIF Biological Term Annotations	1.0	null
SUZ12_DEPLETION_GDS2445_119_human_embryonic fibroblasts	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
Gastrointestinal Carcinoid Tumor	DisGeNET Gene-Disease Associations	1.0	null
Disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.207
chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.938322
pcr	GeneRIF Biological Term Annotations	1.0	null
layer VI of caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.25248
SUM159PT	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.810977
G-402	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.942006
BRD-K45859834	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.15232
multiform (lateral) division of MD	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.134
Liver hepatocellular carcinoma_LIHC_TCGA-EP-A2KC-01A-11R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K83895653	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-5.8502
Ventral pallidus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.03489
Freemartinism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.625
subgenual (subcallosal) division of MFC (area 25)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.80905
BRD-K94442101	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.37818
Autosomal recessive disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.155
BRD-K47754225	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.16978
CL-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23871
melanoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.333218
HELA	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.18556
Mature teratoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.076
central medullary reticular group, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.87226
SkeletalMuscle	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	2.23552
leydig cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.253908
PMC10248509-Data_Sheet_5.CSV--GSE66724_DE-Genes_AND_GSE41177_DE-Genes_NOT_Autophagy_NOT_GSE58294_DE-genes_NR4A2	Rummagene Transcription Factor Associations 2026	1.0	null
EKVX	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.865206
seminoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.727738
paracentral lobule, posterior part, right, bank of cingulate sulcus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.48582
cuneate nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.901787
scrotum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.219707
Trichohepatoenteric Syndrome	DisGeNET Gene-Disease Associations	1.0	null
CardiacMyocytes	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.949836
Gonadal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.201
mouth	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.05376
Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A6H3-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
sexual	GeneRIF Biological Term Annotations	1.0	null
Chromosomal duplication syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.978
Ulnar nerve lesion	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.169
UBC	Pathway Commons Protein-Protein Interactions	1.0	null
SUM1315MO2	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.816806
individuals	GeneRIF Biological Term Annotations	1.0	null
disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.906909
BRD-K71093375	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.07275
Azoospermia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.537
BRD-K45677957	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.1029
female reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.18651
chromosomal part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.338884
impaired	GeneRIF Biological Term Annotations	1.0	null
PMC8025515-12859_2021_4105_MOESM12_ESM.xlsx-PW1-gene_stable_id_PEG3	Rummagene Transcription Factor Associations 2026	1.0	null
paracentral lobule, anterior part, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.055
KYSE-270	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.916242
Developmental disorder of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.193
BRD-K93486796	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.17748
BRD-K82019575	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.18957
alimentary canal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051541
BRD-A00776891	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.08631
testicular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.529994
BRD-K45732260	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.25683
BRD-K64730221	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.34151
BRD-K77074748	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.12009
did	GeneRIF Biological Term Annotations	1.0	null
globose nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.994182
mixed germ cell cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.295851
BRD-K99609051	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.3663
dermatofibroma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.287566
approach	GeneRIF Biological Term Annotations	1.0	null
SOX11	ChEA Transcription Factor Targets	1.0	null
BRD-K39815998	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.73754
cellular_component	LOCATE Curated Protein Localization Annotations	1.0	null
quality	GeneRIF Biological Term Annotations	1.0	null
BRD-K67177501	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.65135
SPI1_GM12891_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
appears	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-580	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
Brain Lower Grade Glioma_LGG_TCGA-FG-A6IZ-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC4521181-oncsis201520x8.pdf-50-CSRNP1_CSRNP1	Rummagene Transcription Factor Associations 2026	1.0	null
influences	GeneRIF Biological Term Annotations	1.0	null
occipital pole, left, superior aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.60222
Male reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.892
Inherited metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.075
respiratory system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054613
Prostate disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.72
female reproductive system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
BRD-K18888894	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.13824
KMS28BM	CCLE Cell Line Gene CNV Profiles	-1.0	-1.57841
cortico-medial group, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.58407
BRD-K44908610	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.71277
Intratubular Malignant Germ Cells	DisGeNET Gene-Disease Associations	1.0	null
BRD-K46619710	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.92919
Pseudohermaphroditism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.426
prerequisite	GeneRIF Biological Term Annotations	1.0	null
nucleus	LOCATE Curated Protein Localization Annotations	1.0	null
Tumor Progression	DisGeNET Gene-Phenotype Associations	1.0	null
loss	GeneRIF Biological Term Annotations	1.0	null
BRD-K07414059	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.17183
line	GeneRIF Biological Term Annotations	1.0	null
skin	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.063743
BRD-K46155894	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.51735
Varicose veins	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.069
Congenital adrenal hyperplasia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.91
Malignant ovarian germ cell neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.556
epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053264
SUM44PE	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.992855
KMS-26	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13413
seminiferous tubule	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.784388
BRD-K98938484	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.23916
BRD-K13206026	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.67668
Mesothelioma_MESO_TCGA-NQ-A638-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Artery disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.27
U-2932	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28656
Lung Injury_Lung Tissue_GSE1541	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.11857
Hematopoietic system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.136
BRD-K74302837	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.68187
hematopoietic system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.224645
hsa-miR-1298	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
g2m	GeneRIF Biological Term Annotations	1.0	null
nasopharynx	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.229839
outer SZ in orbital frontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.827985
central nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053
SW1710	CCLE Cell Line Gene CNV Profiles	-1.0	-1.371
SR786	CCLE Cell Line Gene CNV Profiles	-1.0	-1.53978
BT20	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.13296
Luteoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.311
46,XY sex reversal 1	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.014
BRD-K24369860	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.1098
low	GeneRIF Biological Term Annotations	1.0	null
GSK3B_knockdown_206_GDS4305	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	1.75192
praderwilli	GeneRIF Biological Term Annotations	1.0	null
intracellular non-membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.750452
turner	GeneRIF Biological Term Annotations	1.0	null
colchicine-4614	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Cardiovascular system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.337
BRD-K02024244	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.01288
brain ventricle	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.116692
chlorambucil-4523	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
modifications	GeneRIF Biological Term Annotations	1.0	null
BRD-K88977610	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.26879
analyzed	GeneRIF Biological Term Annotations	1.0	null
NCI-H2595	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0249
cell-nucleus	Phosphosite Textmining Biological Term Annotations	1.0	null
BRD-K08489825	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.11488
follows	GeneRIF Biological Term Annotations	1.0	null
Gonadal Dysgenesis	DisGeNET Gene-Disease Associations	1.0	null
BRD-K02972160	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.51037
been	GeneRIF Biological Term Annotations	1.0	null
Hepatobiliary system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.317
renewal	GeneRIF Biological Term Annotations	1.0	null
subclassification	GeneRIF Biological Term Annotations	1.0	null
Lung cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.055
Sickle cell anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.111
variations	GeneRIF Biological Term Annotations	1.0	null
stratum lacunosum-moleculare of rostral CA1	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.906953
BRD-K34624391	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.18538
enhance	GeneRIF Biological Term Annotations	1.0	null
BRD-K74211805	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.16945
premotor cortex (area 6)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.06112
Germinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.043
Germ cell and embryonal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.685
NCIH1963	CCLE Cell Line Gene CNV Profiles	1.0	1.53672
hypogonadism	GeneRIF Biological Term Annotations	1.0	null
BRD-K67556876	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.4438
intracellular membrane-bounded organelle	GO Cellular Component Annotations 2023	1.0	null
Syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.355
peptide	GeneRIF Biological Term Annotations	1.0	null
USF1_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
endocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.07706
eg	Phosphosite Textmining Biological Term Annotations	1.0	null
plant form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.059651
kinetin-6073	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
DV-90	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
Sex cord-gonadal stromal tumor	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.769
BRD-K40189164	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.07732
BRD-K72135530	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.28862
GSK3A_knockdown_201_GDS4305	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.63723
Male Sterility	DisGeNET Gene-Phenotype Associations	1.0	null
Gonadoblastoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.572
Nodular goiter	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.47
BRD-K06237859	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.16018
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
consequences	GeneRIF Biological Term Annotations	1.0	null
BRD-K81931105	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.34519
cell type cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.689893
Gastrointestinal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.361
BRD-K61278167	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.44986
PMC8995879-Table_1.xlsx-exome_variants_MAF_0_01-Gencode_34_hugoSymbol_MAF	Rummagene Transcription Factor Associations 2026	1.0	null
transgenic	GeneRIF Biological Term Annotations	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-QH-A6X3-01A-21R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Gastrointestinal system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.297
Obesity_Muscle - Striated (Skeletal) (MMHCC)_GSE5109	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-1.23545
internal male genital organ	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
BRD-K79324911	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.7066
BRD-K37071891	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.59502
dysgenetic	GeneRIF Biological Term Annotations	1.0	null
Specific developmental disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.043
IX, left, lateral hemisphere	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.47839
TF1	CCLE Cell Line Gene CNV Profiles	1.0	1.36317
transition	GeneRIF Biological Term Annotations	1.0	null
gigantocellular group, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.06506
Persistent Mullerian duct syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.389
neurohypophysis	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.141591
BRD-K36465335	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.14896
BRD-K35171408	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.30456
while	GeneRIF Biological Term Annotations	1.0	null
nucleolus	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.299569
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
Endocrine gland cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.329
inner SZ in posterior parahippocampal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.927672
Bronchial benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.101
Testicular Leydig cell tumor	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.364
NCIH1836	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39951
substantia nigra, pars reticulata, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.848559
endocrine gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
A3/KAW	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
stomach	HPA Tissue Protein Expression Profiles	1.0	1.75067
HCC38	CCLE Cell Line Gene CNV Profiles	-1.0	-2.03923
HCC1937	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.477107
andor	GeneRIF Biological Term Annotations	1.0	null
SARS-CoV MA15_Day4-PFU-10^3_None_GSE33266	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	2.26012
BRD-K30792491	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.27303
Brain Lower Grade Glioma_LGG_TCGA-DU-6397-01A-11R-1708-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K91596921	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.46344
BRD-K77324165	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.07481
VZ in lateral temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.831533
MALME 3M	BioGPS Cell Line Gene Expression Profiles	1.0	0.877407
gonocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.30973
gabexate-7357	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HUH-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.825095
Benign teratoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.017
Malignant Germ Cell Neoplasm	DisGeNET Gene-Disease Associations	1.0	null
protein-transport	Phosphosite Textmining Biological Term Annotations	1.0	null
Liver cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.333
G402	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44228
Skin Cutaneous Melanoma_SKCM_TCGA-EB-A3XC-01A-11R-A239-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
resulting	GeneRIF Biological Term Annotations	1.0	null
BRD-K18768614	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.30736
BRD-K26852477	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.1084
infertility, male	GAD Gene-Disease Associations	1.0	null
BRD-K95537020	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.97427
male reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.1841
medial superior olive	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.06744
Ovarian disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.677
controls	GeneRIF Biological Term Annotations	1.0	null
amenorrhea	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.289386
superior parietal lobule, left, inferior bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.987398
BRD-K18077898	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.37758
embryo	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.312595
brains	GeneRIF Biological Term Annotations	1.0	null
chaperone	GeneRIF Biological Term Annotations	1.0	null
TCF12	ENCODE Transcription Factor Targets	1.0	null
BRD-K43387144	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.84624
HBL-100	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.997695
testis	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
ECC12	CCLE Cell Line Gene CNV Profiles	1.0	1.58653
superior parietal lobule, left, superior bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.854128
BRD-K79833963	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.00375
BRD-K64640769	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.14864
Muscular dystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.004
BRD-K16695519	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.1267
mutationepigenetic	GeneRIF Biological Term Annotations	1.0	null
lncap	GeneRIF Biological Term Annotations	1.0	null
BRD-K35727000	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.35715
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2MD-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
LS1034	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.97372
lateral habenular nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.6807
DorsalRootGanglion	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.06129
BRD-K77832645	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.17939
mouse	GeneRIF Biological Term Annotations	1.0	null
Heart	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.17397
alexidine-3699	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
JUND	ENCODE Transcription Factor Targets	1.0	null
precentral gyrus, right, inferior lateral aspect of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.53312
BRD-K92191804	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.03899
Connective tissue disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.119
BRD-A65592966	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.52512
BRD-K40432489	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.05256
46,XX sex reversal	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.894
PMC5352183-oncotarget-08-624-s009.xlsx-Table_S20-1_indicates_that_the_gene_is_both_a_TP53-MW_and_a_TP53-MSN_gene_in_the_correponding_cancer_and_0_indicates_not_TP53	Rummagene Transcription Factor Associations 2026	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-P4-A5ED-11A-11R-A28H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
copy	GeneRIF Biological Term Annotations	1.0	null
animal	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
BRD-K89524688	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.79421
BRD-A26583774	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.08596
BRD-A25993094	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.38234
into	GeneRIF Biological Term Annotations	1.0	null
pattern	GeneRIF Biological Term Annotations	1.0	null
Gynecomastia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.011
Brain Lower Grade Glioma_LGG_TCGA-DB-5277-01A-01R-1470-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CSNK2A1	KEA Substrates of Kinases	1.0	null
Endocrine system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.049
combined	GeneRIF Biological Term Annotations	1.0	null
CAL-148	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.942006
Spermatocytoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.951
organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.628613
paraventricular nucleus of the hypothalamus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.978541
BRD-K15389388	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.40776
facial motor nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.6436
OCI-AML3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
Malignant Neoplasm	DisGeNET Gene-Disease Associations	1.0	null
testicular	GeneRIF Biological Term Annotations	1.0	null
USF2	JASPAR Predicted Transcription Factor Targets	1.0	null
internal female genital organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.478923
Brain Lower Grade Glioma_LGG_TCGA-DB-5273-01A-01R-1470-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K28932578	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.65581
tissues, cell types and enzyme sources	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
prominent	GeneRIF Biological Term Annotations	1.0	null
overexpression	GeneRIF Biological Term Annotations	1.0	null
genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.921323
male	GeneRIF Biological Term Annotations	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-GJ-A9DB-01A-11R-A37K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
androgen insensitivity syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.310652
mammillary body, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.28375
BRD-K18416855	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.76333
primary	GeneRIF Biological Term Annotations	1.0	null
HL-60	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28412
BRD-K63803358	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.08321
MDAMB134VI	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.80274
interstitial nucleus of Cajal, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.26028
MT-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.940534
Hypospadias	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.882
effect	GeneRIF Biological Term Annotations	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-HT-7875-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TCF12_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
bmi1_17452456_medulloblastoma_lof_human_gpl570_gds2724	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.098761
liver	GeneRIF Biological Term Annotations	1.0	null
events	GeneRIF Biological Term Annotations	1.0	null
Granulosa Cell Tumor	DisGeNET Gene-Disease Associations	1.0	null
BRD-K53094498	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.46704
cell type benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.4022
BRD-K60127720	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.09156
differentiation	GeneRIF Biological Term Annotations	1.0	null
BRD-K85294251	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.63378
MAX	JASPAR Predicted Transcription Factor Targets	1.0	null
NCI H23	BioGPS Cell Line Gene Expression Profiles	1.0	1.10431
BRD-K65875972	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.0908
BRD-K98408574	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.1217
Female reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.771
Childhood Germ Cell Tumor	DisGeNET Gene-Disease Associations	1.0	null
bergapten	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.47686
Mixed germ cell-sex cord neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.594
tspy	GeneRIF Biological Term Annotations	1.0	null
Adenocarcinoma	DisGeNET Gene-Disease Associations	1.0	null
Congenital Absence Of Germinal Epithelium Of Testes	DisGeNET Gene-Disease Associations	1.0	null
X-linked monogenic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.195
HCV JFH-1_12Hour_20200238_GSE20948	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.41445
reporter	GeneRIF Biological Term Annotations	1.0	null
BRD-K49005954	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.26632
BRD-K25757224	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.66617
upregulates	GeneRIF Biological Term Annotations	1.0	null
Ovarian benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.094
testicular cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.697911
STAT1-20625510-HELA-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
BRD-K30288714	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	5.04564
cyproheptadine-6740	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HS 255.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
BRD-K84932026	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.07561
transcripts	GeneRIF Biological Term Annotations	1.0	null
BRD-K20028734	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.30147
BRD-K71213946	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.29274
juvenile	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.234302
heterochromatin	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.381969
cellular_component	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.548947
T47D	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.20264
nrf1_22586274_liver_lof_mouse_gpl4134_gse35124	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.022006
BRD-K23503923	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.93674
EPHA4_drugactivation_229_GSE26523	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.46439
disorders	GeneRIF Biological Term Annotations	1.0	null
sertoli cell-only syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.483985
carries	GeneRIF Biological Term Annotations	1.0	null
Mesothelioma_MESO_TCGA-LK-A4NZ-01A-12R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
kidney	GTEx Tissue Gene Expression Profiles	1.0	1.16978
BRD-K72335238	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.45618
cell property	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.277197
hypoglossal nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.83935
hcc	GeneRIF Biological Term Annotations	1.0	null
Azoospermia	HuGE Navigator Gene-Phenotype Associations	1.0	null
urogenital system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
digitoxigenin-4217	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K37151525	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.14282
structural	GeneRIF Biological Term Annotations	1.0	null
contrasting	GeneRIF Biological Term Annotations	1.0	null
cefazolin-3686	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K03070961	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.42402
NCI-H510A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
BRD-K19381111	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.50394
Leydig cell tumor	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.73
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2GH-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.22
BRD-K21927299	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.9302
Carcinogenesis	DisGeNET Gene-Phenotype Associations	1.0	null
containing	GeneRIF Biological Term Annotations	1.0	null
intracellular membrane-bounded organelle	LOCATE Curated Protein Localization Annotations	1.0	null
BRD-K79937734	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.37214
Trophoblastic neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.278
ventral posterior inferior nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.954441
BRD-K34721572	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.25611
tspys	GeneRIF Biological Term Annotations	1.0	null
MM.1S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4498
BRD-K01022714	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.41268
microarray	GeneRIF Biological Term Annotations	1.0	null
specimens	GeneRIF Biological Term Annotations	1.0	null
Oligospermia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.701
BRD-K08607520	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.0127
BRD-K63212062	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.41447
postulated	GeneRIF Biological Term Annotations	1.0	null
BRD-K36737730	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.13367
Thoracic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.098
sulfathiazole-4183	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
gonads	GeneRIF Biological Term Annotations	1.0	null
RPMI 8226	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.825506
BRD-K67016489	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.17505
USF1_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
female reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.35858
targeting	GeneRIF Biological Term Annotations	1.0	null
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
SuperiorCervicalGanglion	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.845834
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
oct4	GeneRIF Biological Term Annotations	1.0	null
BRD-K67200393	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.7963
BRD-K57972271	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.66264
Cryptorchidism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.95
Carcinomatosis	DisGeNET Gene-Disease Associations	1.0	null
related	GeneRIF Biological Term Annotations	1.0	null
KASUMI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14833
Chromosomal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.909
BRD-K02159857	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.58206
procainamide-4602	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
spermatogonial	GeneRIF Biological Term Annotations	1.0	null
BRD-A91931411	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.17381
testis	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
infertility	GeneRIF Biological Term Annotations	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-18-3410-01A-01R-0980-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
malignant ovarian surface epithelial-stromal neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.11679
U87	BioGPS Cell Line Gene Expression Profiles	-1.0	-0.962123
BRD-K06537903	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.74362
Turner syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.57
Mixed germ cell cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.597
neurons	GeneRIF Biological Term Annotations	1.0	null
CD19+_BCells(neg._sel.)	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.18133
SUDHL8	CCLE Cell Line Gene CNV Profiles	-1.0	-1.54581
BRD-K41719231	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.03286
Brain Lower Grade Glioma_LGG_TCGA-DU-A7TA-01A-11R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Central nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.127
BRD-K89194869	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.13795
intracellular part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.636723
semen	GeneRIF Biological Term Annotations	1.0	null
BRD-K92725027	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.04632
Edwards syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.826
x chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.333225
PMC4804643-13014_2016_623_MOESM2_ESM.xlsx-Gene_List-MI_genes_MITF	Rummagene Transcription Factor Associations 2026	1.0	null
uterus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.214954
scos	GeneRIF Biological Term Annotations	1.0	null
spermatogonium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.4103
emboliform nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.22997
lateral ganglionic eminence	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.5109
hsa-miR-758	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.257652
OCI-LY-19	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
HCC630	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.940791
CD8+_Tcells	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.58571
BRD-K79568363	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.17127
develop	GeneRIF Biological Term Annotations	1.0	null
dichlorophen	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.32034
Melanoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.283
anchoring collagen complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.314091
endogenous	GeneRIF Biological Term Annotations	1.0	null
turner syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.50403
layer IIIa of caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.49404
BRD-K58248315	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.87646
BRD-K97493608	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.32945
BRD-K45153693	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.70233
prostate gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.730208
developmental	GeneRIF Biological Term Annotations	1.0	null
FOSL2_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K23835343	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.06503
Cryptorchidism	DisGeNET Gene-Disease Associations	1.0	null
BRD-K40219231	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.66121
BRD-K81884810	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.04853
IM-95	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04054
prostate	GeneRIF Biological Term Annotations	1.0	null
Testicular granulosa cell tumor	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.596
BRD-K23553911	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.74413
BRD-K44576681	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.20866
U118	BioGPS Cell Line Gene Expression Profiles	-1.0	-2.07845
paracentral lobule, posterior part, left, bank of cingulate sulcus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.30641
meiotic	GeneRIF Biological Term Annotations	1.0	null
BRD-K64862162	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.04075
had	GeneRIF Biological Term Annotations	1.0	null
acute kidney tubular necrosis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.226952
Cell type cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.889
NCIH1563	CCLE Cell Line Gene CNV Profiles	1.0	1.41887
transcription	GeneRIF Biological Term Annotations	1.0	null
BRD-K27864398	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.93998
BRD-K78603273	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.3339
MEG01	CCLE Cell Line Gene CNV Profiles	1.0	2.49945
BRD-K70518736	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.02886
spermatocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.09783
BRD-A86748098	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05414
BRD-K41271559	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.74652
Seminoma	DisGeNET Gene-Disease Associations	1.0	null
Ovarian germ cell cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.536
H3K9me3_Brain Germinal Matrix	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Triploidy Syndrome	DisGeNET Gene-Disease Associations	1.0	null
Infertility, Male	HuGE Navigator Gene-Phenotype Associations	1.0	null
fetal	GeneRIF Biological Term Annotations	1.0	null
promotes	GeneRIF Biological Term Annotations	1.0	null
BRD-K69528787	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.14055
Liver carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.272
KARPAS-422	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.940534
enhancements	GeneRIF Biological Term Annotations	1.0	null
BRD-K28079391	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.09212
prostate gland cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.66071
BRD-K23585987	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.97498
sex differentiation disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.138275
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-6022-01A-21R-1686-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
locus	GeneRIF Biological Term Annotations	1.0	null
Alzheimer Disease	DisGeNET Gene-Disease Associations	1.0	null
PANC-03-27	GDSC Cell Line Gene Expression Profiles	-1.0	-1.61825
BRD-K19693607	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.23254
used	GeneRIF Biological Term Annotations	1.0	null
testicular germ cell cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.57305
BRD-K86109840	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.71407
CFPAC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0249
Kidney Chromophobe_KICH_TCGA-KO-8404-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-FR-A726-01A-11R-A32P-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cytoplasm	LOCATE Curated Protein Localization Annotations	1.0	null
SB-228357	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.00521
BRD-A09975616	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.30997
almotriptan	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.50557
Breast cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.099
necessary	GeneRIF Biological Term Annotations	1.0	null
BRD-K85401814	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.05112
BRD-A27056524	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.08025
Complete androgen insensitivity syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.01
BRD-K49473928	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.59062
Hypogonadism	DisGeNET Gene-Disease Associations	1.0	null
BRD-K89719122	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.38541
46,XY sex reversal	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.238
Physical disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.531
abducens nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.22422
optimal	GeneRIF Biological Term Annotations	1.0	null
SU-DHL-5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14833
Oligospermia	DisGeNET Gene-Disease Associations	1.0	null
cancers	GeneRIF Biological Term Annotations	1.0	null
functions	GeneRIF Biological Term Annotations	1.0	null
blood	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.232317
interacting	GeneRIF Biological Term Annotations	1.0	null
FOSL2	ENCODE Transcription Factor Targets	1.0	null
interphase	GeneRIF Biological Term Annotations	1.0	null
BRD-K06873288	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.40282
BRD-K47998973	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.03425
SIN3A	ENCODE Transcription Factor Targets	1.0	null
clinical	GeneRIF Biological Term Annotations	1.0	null
lateral intermediate part of entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.14468
BRD-K68916730	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.30685
malebiased	GeneRIF Biological Term Annotations	1.0	null
SKBR3	CCLE Cell Line Gene CNV Profiles	-1.0	-1.60357
Brain Lower Grade Glioma_LGG_TCGA-HT-7677-01A-11R-2256-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SP1_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Teratoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.651
MZ in granular insular cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.927991
array	GeneRIF Biological Term Annotations	1.0	null
generated	GeneRIF Biological Term Annotations	1.0	null
gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
delay	GeneRIF Biological Term Annotations	1.0	null
BRD-K07928699	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.61797
BRD-K01071579	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.03889
responsible	GeneRIF Biological Term Annotations	1.0	null
primary spermatocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.34089
male reproductive system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
pathogenesis	GeneRIF Biological Term Annotations	1.0	null
KM-12	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4498
CSNK2A1	PhosphoSitePlus Substrates of Kinases	1.0	null
Infertility	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.142
connective tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054275
BRD-K59030325	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.48514
BRD-K94441949	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.47601
SP1	ENCODE Transcription Factor Targets	1.0	null
protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041355
Brain Lower Grade Glioma_LGG_TCGA-DU-7299-01A-21R-2027-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
inhibitors	GeneRIF Biological Term Annotations	1.0	null
BRD-K34703146	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.88019
SK-MEL-28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
BRD-K08174111	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05082
TestisGermCell	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.870557
mutation-missense	Phosphosite Textmining Biological Term Annotations	1.0	null
BRD-K07740919	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.90744
BRD-K60287130	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.53616
azoospermia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.02524
BEN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2033
brain	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053082
benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.33501
CAL51	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.940534
GCIY	CCLE Cell Line Gene CNV Profiles	-1.0	-1.55093
ATRFLOX	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.942006
BRD-K45522895	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.43147
Gonadoblastoma	DisGeNET Gene-Disease Associations	1.0	null
BRD-K96547094	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.64134
Lung disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.015
Prostate adenocarcinoma_PRAD_TCGA-J4-A83J-01A-11R-A36G-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
OV-90	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.64906
t300	GeneRIF Biological Term Annotations	1.0	null
AtrioventricularNode	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.53372
deletion	GeneRIF Biological Term Annotations	1.0	null
Azoospermia	DisGeNET Gene-Disease Associations	1.0	null
layer V of caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.843215
A2780	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.940534
BRD-K91577886	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.0982
posterior lobe	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.245491
Germ Cell Tumor	DisGeNET Gene-Disease Associations	1.0	null
internal male genital organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.40432
BRD-K47391428	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.0321
nude	GeneRIF Biological Term Annotations	1.0	null
EEF1A1	Hub Proteins Protein-Protein Interactions	1.0	null
Disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.135
fertile	GeneRIF Biological Term Annotations	1.0	null
BRD-K11636255	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.10043
mediated	GeneRIF Biological Term Annotations	1.0	null
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
BRD-K30214140	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.1759
BRD-K92431275	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.14621
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
integrated	GeneRIF Biological Term Annotations	1.0	null
KRAS.LUNG_UP.V1	MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations	1.0	null
embryonic structure	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.520435
together	GeneRIF Biological Term Annotations	1.0	null
HL60	BioGPS Cell Line Gene Expression Profiles	1.0	1.34312
estradiol_homo sapiens_gpl570_gds3283	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K71836501	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.21903
DMS 79	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06956
LIVF001-009	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.98088
variation	GeneRIF Biological Term Annotations	1.0	null
bind	GeneRIF Biological Term Annotations	1.0	null
COV434	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
dexibuprofen-6712	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
laterodorsal subdivision of area 8	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.69297
copies	GeneRIF Biological Term Annotations	1.0	null
trunk	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052626
ovarian small cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.959542
BRD-K99412981	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.1522
Lung adenocarcinoma_LUAD_TCGA-55-1592-01A-01R-0946-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K85546819	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05394
IZ in posteroinferior (ventral) parietal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.37804
liver cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.469954
BRD-K97962579	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.00824
BRD-K13534347	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.17465
germinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.30095
ectopic	GeneRIF Biological Term Annotations	1.0	null
LXF-289	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.97372
NCI-H358	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09193
GP5D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
BRD-K06876397	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.26275
BRD-K12347309	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05488
organ system benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.046529
gyrus rectus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.912279
significant	GeneRIF Biological Term Annotations	1.0	null
region	GeneRIF Biological Term Annotations	1.0	null
NCI-H446	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02453
BRD-K39526528	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.56064
Sarcoma_SARC_TCGA-K1-A6RV-01A-11R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
lncap cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.750818
own	GeneRIF Biological Term Annotations	1.0	null
BRD-K59045095	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.92142
BRD-K86453556	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.44301
SG in primary visual cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.898536
Germ cell benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.017
revealed	GeneRIF Biological Term Annotations	1.0	null
Embryonal carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.849
caudal portion of VFC (area 44)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.51673
polymorphic	GeneRIF Biological Term Annotations	1.0	null
mice	GeneRIF Biological Term Annotations	1.0	null
NCI-H1155	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
Y-linked monogenic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.622
BICR 22	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4498
PMC7825356-8844261.f3.docx-107-TGIF2LY_TGIF2LY	Rummagene Transcription Factor Associations 2026	1.0	null
Lung adenocarcinoma_LUAD_TCGA-44-7660-01A-11R-2066-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
manners	GeneRIF Biological Term Annotations	1.0	null
reporter	Phosphosite Textmining Biological Term Annotations	1.0	null
hepatocellular carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.315003
organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
BRD-K37532736	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.43202
NCI-H292	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
RERFLCMS	CCLE Cell Line Gene CNV Profiles	1.0	1.47621
LCLC-103H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.35564
shuttling	Phosphosite Textmining Biological Term Annotations	1.0	null
nucleus	GeneRIF Biological Term Annotations	1.0	null
chromosome	GeneRIF Biological Term Annotations	1.0	null
A549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.825095
gonadal dysgenesis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.75913
observation	GeneRIF Biological Term Annotations	1.0	null
system	GeneRIF Biological Term Annotations	1.0	null
BRD-K44287054	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.11523
TRIM28-17542650-NTERA2-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
nadolol-4021	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K28510065	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.21227
bleomycin-sulfate	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.13977
luteoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.954108
Brain Lower Grade Glioma_LGG_TCGA-QH-A6X4-01A-51R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cell-cycle-proteins	Phosphosite Textmining Biological Term Annotations	1.0	null
exhibit	GeneRIF Biological Term Annotations	1.0	null
extracellular matrix part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.052177
Sertoli cell-only syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.703
inferior olivary complex, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.57687
physiology	GeneRIF Biological Term Annotations	1.0	null
BRD-K60937893	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.5947
Thoracic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.101
Autoimmune disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.053
layer I of piriform cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.44189
assembly	GeneRIF Biological Term Annotations	1.0	null
inner CP in subgenual (subcallosal) cingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.41646
male reproductive gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
greatly	GeneRIF Biological Term Annotations	1.0	null
studies	GeneRIF Biological Term Annotations	1.0	null
Testicular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.039
collagen trimer	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.095117
lateral parabrachial nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.894924
NCIH2196	CCLE Cell Line Gene CNV Profiles	1.0	1.84094
SET-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28412
BRD-K64704925	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.00508
features	GeneRIF Biological Term Annotations	1.0	null
plant	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.05338
RL7	BioGPS Cell Line Gene Expression Profiles	1.0	0.891666
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-5356-01A-01R-1436-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K05335635	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.1631
SP in rostral perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.76217
types	GeneRIF Biological Term Annotations	1.0	null
promoter	GeneRIF Biological Term Annotations	1.0	null
SCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.916242
Brain Lower Grade Glioma_LGG_TCGA-FG-7636-01A-11R-2090-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Male Infertility	DisGeNET Gene-Phenotype Associations	1.0	null
Ovarian gonadoblastoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.264
AGS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
BRD-K27302831	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.13917
NCIH508	CCLE Cell Line Gene CNV Profiles	-1.0	-1.55283
Thalassemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.186
BRD-K68705041	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.8806
BRD-K81246784	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.31379
BRD-K71216961	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.10654
pc-3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.429547
days	GeneRIF Biological Term Annotations	1.0	null
Vascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.293
Malignant teratoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.721
BRD-K34519313	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.69499
ionomycin-882	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ck2	GeneRIF Biological Term Annotations	1.0	null
PMC6639357-41467_2019_11150_MOESM4_ESM.xlsx-SupTab1_Activated_genes_diffex-Supplementary_Data_1_Fold_change_and_p-value_of_all_activated_protein_coding_genes_upon_DNMT1-KO_DNMT1	Rummagene Transcription Factor Associations 2026	1.0	null
4-hydroxyphenazone-4095	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
malignant	Phosphosite Textmining Biological Term Annotations	1.0	null
dysgerminoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.65025
polymorphisms	GeneRIF Biological Term Annotations	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-Y8-A8RY-11A-11R-A37K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
rostral migratory stream	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.42756
ZBTB33_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
nucleus	Phosphosite Textmining Biological Term Annotations	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-DH-A7UU-01A-12R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K32120119	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.1251
female reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.32055
malignant	GeneRIF Biological Term Annotations	1.0	null
supporting cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.620621
groin	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.297447
BRD-K95048194	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.73953
BRD-K55510118	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.06504
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
Testicular Feminization	DisGeNET Gene-Disease Associations	1.0	null
cohort	GeneRIF Biological Term Annotations	1.0	null
Systemic Scleroderma	DisGeNET Gene-Disease Associations	1.0	null
Mixed gonadal dysgenesis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.454
medioventral part of putamen	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.04977
HCA-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28412
A-673	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28656
Cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.002
SOX11-23321250-Z138-A519-JVM2-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
truncation	GeneRIF Biological Term Annotations	1.0	null
BRD-K72533381	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.43688
Lung squamous cell carcinoma_LUSC_TCGA-56-A49D-01A-11R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
pharynx	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.068042
germ cell and embryonal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.231102
Nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.246
BRD-K92433833	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.75781
DMS 53	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
BRD-K78395012	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.16237
nucleus	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
NCI-H460	COSMIC Cell Line Gene Mutation Profiles	1.0	null
KELLY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.044
caudal subdivision of paraventricular nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.11921
TGBC24TKB	GDSC Cell Line Gene Expression Profiles	1.0	1.6511
Immune system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.243
furaltadone-3756	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ractopamine	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.55299
crotamiton-3050	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
normal	GeneRIF Biological Term Annotations	1.0	null
VZ in subcallosal region	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.36009
intersex	GeneRIF Biological Term Annotations	1.0	null
CAL33	CCLE Cell Line Gene CNV Profiles	1.0	1.84061
RAMOS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04054
protriptyline-6498	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-C4-A0F1-01A-11R-A034-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
whole body	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.993684
BRD-K26251149	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01447
BRD-K77343050	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.02449
alpha-estradiol-403	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
mullerian	GeneRIF Biological Term Annotations	1.0	null
BRD-K16621460	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.26259
chromosomal region	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.100059
divisions	GeneRIF Biological Term Annotations	1.0	null
IV, left, paravermis	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.38145
epithelioma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.378372
probable	GeneRIF Biological Term Annotations	1.0	null
lung	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.055088
membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
HCT15	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.06499
Female reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.619
BRD-K72561299	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.33976
Skin Cutaneous Melanoma_SKCM_TCGA-BF-A3DM-01A-11R-A20F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
histone	GeneRIF Biological Term Annotations	1.0	null
Genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.63
BRD-K56188606	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.77969
BRD-K40117723	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01955
BRD-K30812092	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.1809
exhibited	GeneRIF Biological Term Annotations	1.0	null
adrenal gland	HPA Tissue Protein Expression Profiles	1.0	0.917838
Prader-Willi Syndrome	DisGeNET Gene-Disease Associations	1.0	null
BRD-K80848948	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.5143
Germ cell cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.435
SARS-CoV MA15_Day7-PFU-10^4_None_GSE33266	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	2.24544
BRD-K47108422	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.00016
teratoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.531154
animal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.991944
spermatogenic	GeneRIF Biological Term Annotations	1.0	null
contribute	GeneRIF Biological Term Annotations	1.0	null
BRD-K49742819	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.38987
BRD-K73579545	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.32991
son	GeneRIF Biological Term Annotations	1.0	null
sertoli cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.661929
cancer	Phosphosite Textmining Biological Term Annotations	1.0	null
external male genital organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.094481
SPI1	ENCODE Transcription Factor Targets	1.0	null
BRD-K59272984	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.02173
X-linked recessive disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.014
BRD-K15028515	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.08541
dentate gyrus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.930379
cyclin	GeneRIF Biological Term Annotations	1.0	null
aplasia	GeneRIF Biological Term Annotations	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-66-2777-01A-01R-1201-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K56889360	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.11815
prostate cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.720461
MDST8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
BRD-K24387453	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.29498
Lung squamous cell carcinoma_LUSC_TCGA-37-4130-01A-01R-1100-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hermaphroditism	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.281153
homozygous	GeneRIF Biological Term Annotations	1.0	null
SREBF1	JASPAR Predicted Transcription Factor Targets	1.0	null
BRD-K78856515	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.0062
PA-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.942006
BRD-K43889095	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.61498
leading	GeneRIF Biological Term Annotations	1.0	null
KP3	CCLE Cell Line Gene CNV Profiles	-1.0	-1.90293
interstitial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.351856
Prostate adenocarcinoma_PRAD_TCGA-EJ-7789-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
homology	GeneRIF Biological Term Annotations	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-GC-A3YS-01A-11R-A23N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
F36P	CCLE Cell Line Gene CNV Profiles	1.0	1.88626
BRD-K70895130	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.58654
BRD-K74855272	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.38778
phosphorylation	GeneRIF Biological Term Annotations	1.0	null
EEF1A2	Pathway Commons Protein-Protein Interactions	1.0	null
paracentral lobule, anterior part, right, inferior bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.914865
EB1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.83449
BRD-K36764343	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.26528
BRD-K75330923	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.30983
female reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.770027
sirolimus_homo sapiens_gpl2895_gse16944	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
imatinib_homo sapiens_gpl96_gds3044	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HIST2H2AC	Pathway Commons Protein-Protein Interactions	1.0	null
BRD-K10494344	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.28345
BRD-A63704386	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.18076
IZ in caudal perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	3.34509
Lung adenocarcinoma_LUAD_TCGA-05-4382-01A-01R-1206-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
evaluation	GeneRIF Biological Term Annotations	1.0	null
Androgen insensitivity syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.048
anterior hypothalamic area, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.80711
markers	GeneRIF Biological Term Annotations	1.0	null
BRD-K96969336	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.16803
disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.398962
organelle	LOCATE Curated Protein Localization Annotations	1.0	null
complete	GeneRIF Biological Term Annotations	1.0	null
BRD-K64559139	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.17833
Microcytic anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.086
GRANTA-519	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4498
Pelvic varices	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.256
transport	GeneRIF Biological Term Annotations	1.0	null
demonstrated	GeneRIF Biological Term Annotations	1.0	null
BRD-K78218619	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.20139
NCI-H2369	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13413
MDAMB157	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.243
syndrome	GeneRIF Biological Term Annotations	1.0	null
disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.921323
Endodermal sinus tumor	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.115
lateral subdivision of area 9	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-2.47037
ZR7530	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.42768
JUND_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H2081	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
BRD-K27120020	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.37283
NUGC-3	GDSC Cell Line Gene Expression Profiles	-1.0	-1.42863
dermis	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.158186
cochlear nuclei, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.18194
FARAGE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04054
ABL1_knockdown_137_GSE31534	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.57253
KMS34	CCLE Cell Line Gene CNV Profiles	-1.0	-1.45026
Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A5BS-01A-21R-A26T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TRIM28	ChEA Transcription Factor Targets	1.0	null
BRD-K72774661	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.74121
Respiratory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.06
ovarian carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.125093
counselling	GeneRIF Biological Term Annotations	1.0	null
Multinodular goiter	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.163
tolmetin-3009	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Y-linked spermatogenic failure 2	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.024
NCI-H1975	GDSC Cell Line Gene Expression Profiles	1.0	1.49527
BRD-K62318087	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.95484
BRD-K79148949	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.63354
naloxone-4645	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
KG1C	CCLE Cell Line Gene CNV Profiles	1.0	1.71826
KRAS.LUNG.BREAST_UP.V1	MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations	1.0	null
central nuclear group	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.81384
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A115-01A-11R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K66632266	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.29735
inner SZ in dorsomedial extrastriate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.1931
signal	GeneRIF Biological Term Annotations	1.0	null
Hematologic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.067
Brain Lower Grade Glioma_LGG_TCGA-TM-A84S-01A-11R-A36H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
spermatids	GeneRIF Biological Term Annotations	1.0	null
Male infertility	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.609
Hypertension	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.343
exert	GeneRIF Biological Term Annotations	1.0	null
Spermatogenic failure 9	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.337
BRD-K56149020	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.58
BRD-A17687311	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.14382
lung cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.484766
Gestational trophoblastic neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.208
BRD-K42084582	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.03007
BRD-K89793018	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.21139
hsa-miR-4640-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
Prostate Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
FOSL2_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Heschl's gyrus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.16079
layer IIIu of area 35r	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.105
Placenta cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.592
chromosome, centromeric region	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.311105
BRD-K97128200	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.18871
KE39	CCLE Cell Line Gene CNV Profiles	-1.0	-1.5719
BRD-K30895360	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.12933
Goiter	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.078
upper limb region of M1	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.858504
Lung squamous cell carcinoma_LUSC_TCGA-85-6798-01A-11R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
outer CP in temporal polar cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.22704
mediating	GeneRIF Biological Term Annotations	1.0	null
BRD-K05411364	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.40646
BRD-K55648964	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.24821
mitotic	GeneRIF Biological Term Annotations	1.0	null
insights	GeneRIF Biological Term Annotations	1.0	null
genome	GeneRIF Biological Term Annotations	1.0	null
compared	GeneRIF Biological Term Annotations	1.0	null
Male infertility due to globozoospermia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.336
leads	GeneRIF Biological Term Annotations	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-FG-8182-01A-11R-2256-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-A35323217	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.11168
Intellectual disability	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.061
Sertoli cell tumor	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.244
amiodarone-4657	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
organism form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.658678
Breast disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.102
Liver hepatocellular carcinoma_LIHC_TCGA-CC-A7IK-01A-12R-A33R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Oligoasthenoteratozoospermia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.294
animal	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Testicular cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.053
secondary spermatocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.197047
WSU-NHL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04054
Brain Lower Grade Glioma_LGG_TCGA-RY-A83Y-01A-11R-A36H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
other	GeneRIF Biological Term Annotations	1.0	null
A-VN-1203-2004(H5N1)_Day1-10^4pfu_22074594_GSE33263	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-2.00833
Non-Obstructive Azoospermia	DisGeNET Gene-Disease Associations	1.0	null
BRD-K98253383	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.07101
BRD-K69337311	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.3068
xencoded	GeneRIF Biological Term Annotations	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-BT-A2LA-01A-11R-A18C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K74688087	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.44873
M059K	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33747
enoxacin-5616	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K43714461	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.65823
frameshift	GeneRIF Biological Term Annotations	1.0	null
OKAJIMA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.864785
ovary	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.239307
cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.698313
maturation	GeneRIF Biological Term Annotations	1.0	null
BRD-K39476596	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.23591
collectively	GeneRIF Biological Term Annotations	1.0	null
contained	GeneRIF Biological Term Annotations	1.0	null
directly	GeneRIF Biological Term Annotations	1.0	null
BRD-K97223487	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01734
SIN3A_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Familial (Fpah)	DisGeNET Gene-Disease Associations	1.0	null
tumors	GeneRIF Biological Term Annotations	1.0	null
conserved	GeneRIF Biological Term Annotations	1.0	null
testis	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.5415
OVKATE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4498
head	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052468
hsa-miR-4753-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
BRD-A64523751	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.04635
nuclear part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041925
ML-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04054
BRD-A02612852	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.10341
NCI-H209	GDSC Cell Line Gene Expression Profiles	-1.0	-1.42711
carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.379123
HCC12	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
spinal trigeminal nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.01403
COLO-684	GDSC Cell Line Gene Expression Profiles	1.0	1.76524
germ	GeneRIF Biological Term Annotations	1.0	null
pontine nuclei, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.842468
BRD-K40474424	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.42258
yolk sac	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.572018
BRD-K60437668	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.36054
chromosomal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.35115