association	dataset	threshold value	standardized value
disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.586665
HCC38	CCLE Cell Line Gene CNV Profiles	-1.0	-1.81153
organ system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.561392
SCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.916242
UBC	Pathway Commons Protein-Protein Interactions	1.0	null
Malignant Germ Cell Neoplasm	DisGeNET Gene-Disease Associations	1.0	null
PF382	CCLE Cell Line Gene CNV Profiles	-1.0	-2.22832
intracellular part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.688139
RPMI 8226	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.825506
TCF12	ENCODE Transcription Factor Targets	1.0	null
Multiple Chronic Conditions	DisGeNET Gene-Disease Associations	1.0	null
MM.1S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4498
Seminoma	DisGeNET Gene-Disease Associations	1.0	null
organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
vaginal epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.294939
melanoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.289744
KMS-26	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13413
reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.993174
intracellular organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.304399
Lung squamous cell carcinoma_LUSC_TCGA-85-6798-01A-11R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041287
NCI-H1155	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
NCIH460	CCLE Cell Line Gene CNV Profiles	1.0	1.33358
hsa-miR-4680-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
CAL33	CCLE Cell Line Gene CNV Profiles	1.0	1.83689
NCIH1963	CCLE Cell Line Gene CNV Profiles	1.0	1.53337
cellular_component	LOCATE Curated Protein Localization Annotations	1.0	null
icSARS CoV_0Hour_None_GSE37827	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.51346
male reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.08789
Malignant Neoplasm	DisGeNET Gene-Disease Associations	1.0	null
germ cell cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.974642
intracellular part	LOCATE Curated Protein Localization Annotations	1.0	null
Autosomal dominant adult-onset proximal spinal muscular atrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.103
OKAJIMA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.864785
TF1	CCLE Cell Line Gene CNV Profiles	1.0	1.36059
NCI-H446	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02453
gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
PMC5352183-oncotarget-08-624-s009.xlsx-Table_S20-1_indicates_that_the_gene_is_both_a_TP53-MW_and_a_TP53-MSN_gene_in_the_correponding_cancer_and_0_indicates_not_TP53	Rummagene Transcription Factor Associations 2026	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-GJ-A9DB-01A-11R-A37K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
intracellular organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.682463
JHH2	CCLE Cell Line Gene CNV Profiles	1.0	2.10893
sex chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.74511
SKNSH	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44966
MEG01	CCLE Cell Line Gene CNV Profiles	1.0	2.49628
ovarian small cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.909787
dermis	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.151535
Carcinogenesis	DisGeNET Gene-Phenotype Associations	1.0	null
morula	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.109675
KP3	CCLE Cell Line Gene CNV Profiles	-1.0	-1.71037
prostate cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.586828
gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.03653
intracellular membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
testicular germ cell cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.526518
testis	HPA Tissue Protein Expression Profiles	1.0	0.917838
reproductive organ benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.091489
sertoli cell tumor	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.624927
bone marrow	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.072065
Skin Cutaneous Melanoma_SKCM_TCGA-BF-A3DM-01A-11R-A20F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-39-5021-01A-01R-1443-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H2106	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.11327
artery disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.058974
chorionic villus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.658678
whole plant	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.05299
hsa-miR-1914	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
gametocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.193554
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-LP-A4AU-01A-32R-A32Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
thyroid gland disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.062711
ZR751	CCLE Cell Line Gene CNV Profiles	-1.0	-1.91136
cell type cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.642221
CFPAC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0249
FOSL2_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
M059K	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33747
Kidney renal clear cell carcinoma_KIRC_TCGA-AS-3777-01A-01R-0864-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
embryonic stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.28213
TFAP2A	JASPAR Predicted Transcription Factor Targets	1.0	null
H3K9me3_fibroblast of lung_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
BJAB	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04054
NU-DUL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28656
chromosomal part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.41612
KASUMI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14833
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
HCA-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28412
G-402	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.942006
NCI-H358	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09193
HCC1534	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
gravid adult	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.256568
ECC12	CCLE Cell Line Gene CNV Profiles	1.0	1.58301
JUND_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
secondary spermatocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.194879
WSU-NHL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04054
G402	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33164
Intratubular Malignant Germ Cells	DisGeNET Gene-Disease Associations	1.0	null
HBL-100	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.997695
germ cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.50339
intracellular membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
NCI-H2595	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0249
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
GRANTA-519	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4498
intracellular membrane-bounded organelle	GO Cellular Component Annotations 2023	1.0	null
whole body	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.24565
nucleus	GO Cellular Component Annotations 2023	1.0	null
NCIH1651	CCLE Cell Line Gene CNV Profiles	1.0	2.28144
SPI1	ENCODE Transcription Factor Targets	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A3AB-06A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
macromolecular complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.042252
umbilical cord	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.095955
KMS34	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33852
Pancreatic adenocarcinoma_PAAD_TCGA-3E-AAAZ-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Male Infertility	DisGeNET Gene-Phenotype Associations	1.0	null
A-673	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28656
germinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.24863
spermatogonium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.3228
membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
internal female genital organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.621024
teratoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.485125
skeletal system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053592
ZBTB33_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SW837	CCLE Cell Line Gene CNV Profiles	-1.0	-1.41994
OVKATE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4498
LXF-289	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.97372
autosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.58134
Brain Lower Grade Glioma_LGG_TCGA-S9-A6U5-01A-12R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Placental Insufficiency	DisGeNET Gene-Disease Associations	1.0	null
male reproductive gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Kidney Chromophobe_KICH_TCGA-KN-8430-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.00005
integument	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054065
PMC5550424-41467_2017_212_MOESM4_ESM.xlsx-Hematlas-Genesets-DNTTIP1_DNTTIP1	Rummagene Transcription Factor Associations 2026	1.0	null
cell part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.634586
malignant teratoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.385193
HCC630	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.940791
DMS 79	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06956
endocrine gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
pc-3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.357058
ZBTB33	ENCODE Transcription Factor Targets	1.0	null
RERF-LC-KJ	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.825506
NFKB1	JASPAR Predicted Transcription Factor Targets	1.0	null
Triploidy Syndrome	DisGeNET Gene-Disease Associations	1.0	null
U-2932	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28656
stomach	HPA Tissue Protein Expression Profiles	1.0	1.75067
sex cord-stromal neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.36187
A-427	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.97372
ovarian carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.123675
mesoderm	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.06969
Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5894-01A-11R-1592-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
male reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.52808
carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.308251
SPI1_GM12891_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
urogenital system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
blastula	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.442194
reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.41307
adrenal gland	HPA Tissue Protein Expression Profiles	1.0	0.917838
nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.050845
Lung adenocarcinoma_LUAD_TCGA-44-7660-01A-11R-2066-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SK-MM-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4498
central nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051267
amenorrhea	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.246799
sertoli cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.584422
Esophagus - Gastroesophageal Junction	GTEx Tissue Gene Expression Profiles 2023	1.0	7.21239
IM-95M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
Liver hepatocellular carcinoma_LIHC_TCGA-CC-A1HT-01A-11R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HL-60	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28412
endocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.04577
benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.28173
SU-DHL-5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14833
CL-34	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.044
BEN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2033
liver cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.424765
placental insufficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.337608
KARPAS-422	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.940534
organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.676368
spermatocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.01331
VMRCLCP	CCLE Cell Line Gene CNV Profiles	-1.0	-1.77161
chromosomal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.3542
membrane-bounded organelle	LOCATE Curated Protein Localization Annotations	1.0	null
uterine disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.065361
endocrine system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.076314
peripheral blood	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.906682
intracellular membrane-bounded organelle	LOCATE Curated Protein Localization Annotations	1.0	null
Childhood Germ Cell Tumor	DisGeNET Gene-Disease Associations	1.0	null
CL-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23871
CAL-148	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.942006
hsa-miR-4640-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
Adult Germ Cell Tumor	DisGeNET Gene-Disease Associations	1.0	null
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
KG1C	CCLE Cell Line Gene CNV Profiles	1.0	1.7145
Prostate adenocarcinoma_PRAD_TCGA-EJ-7789-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GCIY	CCLE Cell Line Gene CNV Profiles	-1.0	-1.42332
cellular_component	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.603596
hsa-miR-758	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
SNU1076	CCLE Cell Line Gene CNV Profiles	1.0	2.84393
edwards syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.384822
leukocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052203
germ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.420004
patau syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.534248
COV318	CCLE Cell Line Gene CNV Profiles	-1.0	-1.6023
SK-N-AS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14437
KNS42	CCLE Cell Line Gene CNV Profiles	-1.0	-1.53301
hepatocellular carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.271886
MCF 10A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
NCI-H1048	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04054
skin	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.062246
HEC108	CCLE Cell Line Gene CNV Profiles	-1.0	-1.61453
BICR 22	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4498
blood vessel	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054849
adult	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.228497
seminiferous tubule	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.705173
Bladder Urothelial Carcinoma_BLCA_TCGA-GU-A42P-01A-11R-A23W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
turner syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.50667
disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.00161
SREBF1	JASPAR Predicted Transcription Factor Targets	1.0	null
624 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.18996
hsa-miR-3140-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
NCIH1563	CCLE Cell Line Gene CNV Profiles	1.0	1.41602
cardiovascular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053392
epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.05341
A3/KAW	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
NAMALWA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04054
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5469-11A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-KK-A7AQ-01A-11R-A33R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SUM 159PT	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.940534
cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.732191
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2MD-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KM-12	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4498
647V	CCLE Cell Line Gene CNV Profiles	1.0	1.54653
Prostate Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-K7-AAU7-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
internal male genital organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.31649
embryo	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.294939
ovary epithelial cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.104374
placenta	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.075005
hypersensitivity reaction type ii disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.290103
E2F1	JASPAR Predicted Transcription Factor Targets	1.0	null
dermatofibroma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.449116
SP1	ENCODE Transcription Factor Targets	1.0	null
intracellular organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
SKBR3	CCLE Cell Line Gene CNV Profiles	-1.0	-1.46836
OCI-LY-19	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
U343	CCLE Cell Line Gene CNV Profiles	1.0	1.84037
CL-40	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
PE/CA-PJ15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09193
PMC7825356-8844261.f3.docx-107-TGIF2LY_TGIF2LY	Rummagene Transcription Factor Associations 2026	1.0	null
NCIH2196	CCLE Cell Line Gene CNV Profiles	1.0	1.83723
Kidney Chromophobe_KICH_TCGA-KN-8436-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4696-01A-01R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
azoospermia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.974642
Sarcoma_SARC_TCGA-K1-A6RV-01A-11R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney Chromophobe_KICH_TCGA-KO-8404-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
spermatid	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.835737
goiter	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.120832
OV-90	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.64906
connecting stalk	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.09345
androgen insensitivity syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.267622
fetus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.07618
du-145 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.229839
supporting cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.543756
HS 895.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.940534
Prostate adenocarcinoma_PRAD_TCGA-J4-A83J-01A-11R-A36G-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
lung	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054489
chorion	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.628293
GP5D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
HS 255.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
LCLC-103H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.35564
nucleus	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.161905
heterochromatin	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.354042
sertoli cell-only syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.438658
germ layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.060487
KMS28BM	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44691
blood	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.06471
dysgerminoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.59653
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
sex differentiation disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.136771
CA46	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
EKVX	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.865206
NCI-H2369	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13413
hematopoietic system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.05149
UKE-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.044
cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
intracellular part	LOCATE Predicted Protein Localization Annotations	1.0	null
icSARS CoV_12Hour_None_GSE37827	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-2.22645
SK-MEL-28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
ZBTB33_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
extracellular region part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.04531
mixed germ cell cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.253127
FOSL2_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
pre-eclampsia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.771661
vagina	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.439507
FOSL2	ENCODE Transcription Factor Targets	1.0	null
mononuclear cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.28213
Lung adenocarcinoma_LUAD_TCGA-50-5072-01A-21R-1858-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
plant form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.058552
Gonadal Dysgenesis	DisGeNET Gene-Disease Associations	1.0	null
A2780	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.940534
peripheral blood mononuclear cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.399114
organism form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.96809
nodular goiter	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.320817
dermatofibroma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.244023
SIN3A	ENCODE Transcription Factor Targets	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-BT-A2LA-01A-11R-A18C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Urolithiasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.379
cervicovaginal fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.259591
primordium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.728975
hsa-miR-580	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
NCI-H2461	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.4105
cytoplasm	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
female reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.050325
Bladder Urothelial Carcinoma_BLCA_TCGA-C4-A0F1-01A-11R-A034-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
placenta disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.111008
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-5356-01A-01R-1436-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
lymphoid cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053206
x chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.305888
Gastrointestinal Carcinoid Tumor	DisGeNET Gene-Disease Associations	1.0	null
Endometriosis of ovary	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.412
collagen type vi trimer	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.41182
SUPHD1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.04404
chromosome, centromeric region	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.527979
testis	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.451
internal male genital organ	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
cell	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.634586
SUDHL8	CCLE Cell Line Gene CNV Profiles	-1.0	-1.41897
respiratory system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054066
organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.301425
semen	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.961607
KMS21BM	CCLE Cell Line Gene CNV Profiles	-1.0	-1.64706
Liver Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
A549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.825095
umbilical artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.145804
giant cell tumor cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.450271
intracellular non-membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.801104
cell type benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.34853
Alzheimer Disease	DisGeNET Gene-Disease Associations	1.0	null
reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.72127
gonad	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.65157
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
Dysgerminoma	DisGeNET Gene-Disease Associations	1.0	null
cell part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
ML-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04054
extracellular matrix part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.051549
JUND	ENCODE Transcription Factor Targets	1.0	null
EB1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.65787
M059J	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.38241
intracellular part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
connective tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051838
male reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.786803
SP1_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
testis	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
HS 746T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33072
organelle	LOCATE Curated Protein Localization Annotations	1.0	null
Systemic Scleroderma	DisGeNET Gene-Disease Associations	1.0	null
NCI-H292	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
gonocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.2238
y chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.97486
female reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.289386
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
umbilical cord blood	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.33156
LS180	CCLE Cell Line Gene CNV Profiles	-1.0	-1.58198
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
USF1	JASPAR Predicted Transcription Factor Targets	1.0	null
trunk	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052171
vascular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054
RBBP5	ENCODE Transcription Factor Targets	1.0	null
KELLY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.044
MDST8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
SU-DHL-6	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14833
GP2D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.940534
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.890909
NCIH508	CCLE Cell Line Gene CNV Profiles	-1.0	-1.42494
Lung adenocarcinoma_LUAD_TCGA-05-4382-01A-01R-1206-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
female reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
hermaphroditism	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.238752
icSARS CoV_30Hour_None_GSE37827	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.69057
Breast Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
anchoring collagen complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.286983
EB1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.940534
Germ Cell Tumor	DisGeNET Gene-Disease Associations	1.0	null
intracellular	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
SK-OV-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4498
HS863T	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
SU-DHL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.11327
CI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04054
Carcinomatosis	DisGeNET Gene-Disease Associations	1.0	null
RAMOS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04054
animal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.24387
Testicular Feminization	DisGeNET Gene-Disease Associations	1.0	null
male reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
bone marrow cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.226411
gonadal dysgenesis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.73823
Lung adenocarcinoma_LUAD_TCGA-55-1592-01A-01R-0946-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
b-lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.070039
hematopoietic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.316224
MT-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.940534
KE39	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44131
seminoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.679499
autosomal genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.045576
Familial (Fpah)	DisGeNET Gene-Disease Associations	1.0	null
whole body	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
chromatin	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.235966
DV-90	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
Gonadoblastoma	DisGeNET Gene-Disease Associations	1.0	null
Rectum adenocarcinoma_READ_TCGA-G5-6641-01A-11R-A32Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
nucleus	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
chromosomal region	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.113348
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-6022-01A-21R-1686-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PA-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.942006
prader-willi syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.183248
COV504	CCLE Cell Line Gene CNV Profiles	-1.0	-1.83461
head	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.050607
SR786	CCLE Cell Line Gene CNV Profiles	-1.0	-1.41386
plasma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.252919
liver carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.269398
autosomal recessive disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.0547
uterus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.298165
brain ventricle	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.10814
HEC265	CCLE Cell Line Gene CNV Profiles	-1.0	-1.4967
ovarian disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.114847
USF1	ENCODE Transcription Factor Targets	1.0	null
nucleus	LOCATE Curated Protein Localization Annotations	1.0	null
nucleolus	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.273
disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.928759
non-membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.801104
RT-112	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04054
DDR1_knockdown_169_GSE39207	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.36503
groin	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.232881
SCC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
plant	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052977
hypersensitivity reaction disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.252774
female reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.31514
RXRA	ENCODE Transcription Factor Targets	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-KK-A7B2-01A-12R-A32O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
epithelioma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.307528
KYSE-270	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.916242
NCI-H2081	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
Lung adenocarcinoma_LUAD_TCGA-55-6969-01A-11R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HMY-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.825095
PMC6639357-41467_2019_11150_MOESM4_ESM.xlsx-SupTab1_Activated_genes_diffex-Supplementary_Data_1_Fold_change_and_p-value_of_all_activated_protein_coding_genes_upon_DNMT1-KO_DNMT1	Rummagene Transcription Factor Associations 2026	1.0	null
hypertension	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.324823
Liver And Intrahepatic Biliary Tract Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
Tumor Progression	DisGeNET Gene-Phenotype Associations	1.0	null
RXRA_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2GH-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Sarcoma_SARC_TCGA-DX-A6YZ-01A-12R-A355-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hypogonadism	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.232836
organ system benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.046075
Lung squamous cell carcinoma_LUSC_TCGA-37-4130-01A-01R-1100-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
trophoblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.530298
CORL47	CCLE Cell Line Gene CNV Profiles	1.0	1.56209
animal	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.042879
EFO-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04054
Liver hepatocellular carcinoma_LIHC_TCGA-K7-A5RG-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
male infertility	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.14857
Swyer Syndrome	DisGeNET Gene-Disease Associations	1.0	null
AGS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
prostate gland cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.58322
lncap cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.671692
urogenital system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.34542
lung cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.41087
male reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.52045
PMC7455079-jciinsight-5-140380-s227.xlsx-Supp_Table_9-Supplemental_Table_9_Limma_DE_Analysis_of_HC_AA_to_EA_TEAD1	Rummagene Transcription Factor Associations 2026	1.0	null
HCC4011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.825506
NCI-H510A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
Head and Neck squamous cell carcinoma_HNSC_TCGA-BA-5152-01A-02R-1873-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ATRFLOX	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.942006
Congenital Absence Of Germinal Epithelium Of Testes	DisGeNET Gene-Disease Associations	1.0	null
tissues, cell types and enzyme sources	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.24163
Brain Lower Grade Glioma_LGG_TCGA-HT-8011-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-BW-A5NO-01A-11R-A27V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
primary spermatocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.25458
monogenic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.044719
prostate gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.651777
down syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.203604
NCIH810	CCLE Cell Line Gene CNV Profiles	1.0	1.32976
HCC2935	CCLE Cell Line Gene CNV Profiles	1.0	1.41665
lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.055438
fetal membrane	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.308251
immune system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.04319
organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
cell part	LOCATE Curated Protein Localization Annotations	1.0	null
RBBP5_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
vascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.050852
germ cell and embryonal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.191097
gonadal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.304503
hsa-miR-1298	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
SIN3A_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
F36P	CCLE Cell Line Gene CNV Profiles	1.0	1.8824
intracellular membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.042946
Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A5BS-01A-21R-A26T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
embryonic structure	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.954703
zygote	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.101171
RERFLCMS	CCLE Cell Line Gene CNV Profiles	1.0	1.47321
nuclear part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041819
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.948991
IPC-298	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
WM-115	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14437
FARAGE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04054
cardiovascular system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.046711
USF1_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
female reproductive gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
brain	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051306
GOS3	CCLE Cell Line Gene CNV Profiles	1.0	1.96336
SET-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28412
SNU886	CCLE Cell Line Gene CNV Profiles	1.0	1.40566
egg	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.314409
MAX	JASPAR Predicted Transcription Factor Targets	1.0	null
collagen trimer	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.09313
testicular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.483985
intracellular organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
female reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.30343
USF2	JASPAR Predicted Transcription Factor Targets	1.0	null
cell property	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.21883
ovarian cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.067842
KMS-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.28879
intracellular	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.65905
PMC6962646-mmc2.xlsx-StemCell_Genesets_2018-DNTTIP1_DNTTIP1	Rummagene Transcription Factor Associations 2026	1.0	null
COR-L279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09193
interstitial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.281776
malignant ovarian surface epithelial-stromal neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.115042
HCC12	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
yolk sac	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.496092
lymphoid tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052246
786O	CCLE Cell Line Gene CNV Profiles	1.0	1.42525
prostate cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.671925
gastrointestinal system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.29118
testicular cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.650113
COLO 794	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.850426
JUND_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
OCI-AML3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
mixed gonadal dysgenesis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.823308
DMS 53	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82111
TCF12_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-56-A49D-01A-11R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-CC-5263-01A-01R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
intracellular organelle	LOCATE Curated Protein Localization Annotations	1.0	null
LXFL529	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
sickle cell anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.478668
DMS 454	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.865206
HCC1482	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.942006
artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.059004
HS 839.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
nucleus	LOCATE Predicted Protein Localization Annotations	1.0	null
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Adult Liver Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
gonadoblastoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	2.59341
epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052792
KPNSI9S	CCLE Cell Line Gene CNV Profiles	1.0	1.56392
IM-95	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04054
COV434	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856914
USF1_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
blastomere	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.10658
HUH-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.825095
luteoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.904442
juvenile	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.271952
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-GC-A3YS-01A-11R-A23N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CAL51	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.940534
gonad	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A43Y-01A-21R-A26T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
blood plasma	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.01506
genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.967502
choroid plexus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.287447
LS1034	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.97372