association	dataset	threshold value	standardized value
TE617T	CCLE Cell Line Gene CNV Profiles	-1.0	-1.8498
NCI-H810	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.30338
HS821T	CCLE Cell Line Gene CNV Profiles	-1.0	-1.40009
EP300	ENCODE Transcription Factor Targets	1.0	null
A3KAW	CCLE Cell Line Gene CNV Profiles	-1.0	-1.41304
HCC70	CCLE Cell Line Gene CNV Profiles	-1.0	-1.78795
H3K4me2_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K9ac_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
CAMA1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.55724
NCIH810	CCLE Cell Line Gene CNV Profiles	1.0	3.2803
H3K4me3_A549_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
H3K27ac_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
SCC-9	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.907751
TE441T	CCLE Cell Line Gene CNV Profiles	-1.0	-1.51256
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A29L-06A-12R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
OCI-LY-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.911828
DB	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.911828
HS 936.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.936559
Mesothelioma_MESO_TCGA-MQ-A6BS-01A-12R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K27me3_skeletal muscle myoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HT1197	CCLE Cell Line Gene CNV Profiles	1.0	1.35455
KP3	CCLE Cell Line Gene CNV Profiles	-1.0	-2.27612
MG-63	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.911437
NCIH1651	CCLE Cell Line Gene CNV Profiles	1.0	2.15328
SK-MES-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09935
KDM5A	ENCODE Transcription Factor Targets	1.0	null
NCIH1563	CCLE Cell Line Gene CNV Profiles	1.0	1.34586
CTCF_GM10248_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC38	CCLE Cell Line Gene CNV Profiles	-1.0	-2.13725
KG1C	CCLE Cell Line Gene CNV Profiles	1.0	1.61964
NCIH1975	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34749
HCC1954	CCLE Cell Line Gene CNV Profiles	-1.0	-1.54021
ESRRA_01_280	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.59993
KDM5A_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
YAPC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.882828
HS863T	CCLE Cell Line Gene CNV Profiles	-1.0	-1.7199
MDAMB361	CCLE Cell Line Gene CNV Profiles	-1.0	-1.60328
A4FUK	CCLE Cell Line Gene CNV Profiles	-1.0	-2.22407
HDAC2_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GOS3	CCLE Cell Line Gene CNV Profiles	1.0	1.85102
786O	CCLE Cell Line Gene CNV Profiles	1.0	1.35455
Brain Lower Grade Glioma_LGG_TCGA-E1-A7YM-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KYSE520	CCLE Cell Line Gene CNV Profiles	-1.0	-1.91938
JHOS4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39263
C32TG	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.882828
CAL33	CCLE Cell Line Gene CNV Profiles	1.0	1.73284
EZH2	ENCODE Transcription Factor Targets	1.0	null
EZH2_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CHAGOK1	CCLE Cell Line Gene CNV Profiles	1.0	1.85501
KU812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.30402
CTCF_pancreas_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HDAC2	ENCODE Transcription Factor Targets	1.0	null
H3K79me2_HepG2_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
NCI-H820	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.989708
H3K4me1_fibroblast of lung_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K27me3_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
YY1	JASPAR Predicted Transcription Factor Targets	1.0	null
GABPA_01_191	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	9.99247
NCIH2196	CCLE Cell Line Gene CNV Profiles	1.0	1.73316
HS281T	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32351
F36P	CCLE Cell Line Gene CNV Profiles	1.0	1.77576
COV504	CCLE Cell Line Gene CNV Profiles	-1.0	-2.25883
H3K27me3_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H1651	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02619
VMRCRCZ	CCLE Cell Line Gene CNV Profiles	-1.0	-1.4601
RAF1_overexpression_220_GSE42964	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	1.66449
HCC2935	CCLE Cell Line Gene CNV Profiles	1.0	1.34646
RERFLCMS	CCLE Cell Line Gene CNV Profiles	1.0	1.40092
NCIH2227	CCLE Cell Line Gene CNV Profiles	-1.0	-1.54317
POLR2A	ENCODE Transcription Factor Targets	1.0	null
CORL47	CCLE Cell Line Gene CNV Profiles	1.0	1.48268
H3K27ac_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
NCI-H2198	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.859051
TOV21G	CCLE Cell Line Gene CNV Profiles	-1.0	-1.46468
MEG01	CCLE Cell Line Gene CNV Profiles	1.0	2.39376
EW8	CCLE Cell Line Gene CNV Profiles	1.0	1.88055
H3K9ac_H1-hESC_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
NCIH1963	CCLE Cell Line Gene CNV Profiles	1.0	1.45722
H3K9ac_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
CTCF_LNCaP clone FGC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H2452	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.836732
ECC12	CCLE Cell Line Gene CNV Profiles	1.0	1.50144
COLO668	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44539
647V	CCLE Cell Line Gene CNV Profiles	1.0	1.46891
TE9	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32215
H3K9me1_endothelial cell of umbilical vein_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
ZR751	CCLE Cell Line Gene CNV Profiles	-1.0	-2.00451
SNU1076	CCLE Cell Line Gene CNV Profiles	1.0	1.38781
NCI-H2810	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.883223
CTCF	ENCODE Transcription Factor Targets	1.0	null
TF1	CCLE Cell Line Gene CNV Profiles	1.0	2.43565
EP300_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KPNSI9S	CCLE Cell Line Gene CNV Profiles	1.0	1.53602
FOXC1	JASPAR Predicted Transcription Factor Targets	1.0	null
POLR2A_A549_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me1_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
NCI-H2804	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.859051
CTCF_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KMS21BM	CCLE Cell Line Gene CNV Profiles	-1.0	-2.76707
SNU-182	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.859051
JHH2	CCLE Cell Line Gene CNV Profiles	1.0	1.98838
HMC18	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32741
U343	CCLE Cell Line Gene CNV Profiles	1.0	1.73617
IKZF1_01_138	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.6075
HOXA5	JASPAR Predicted Transcription Factor Targets	1.0	null
SNU-475	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.989708