association	dataset	threshold value	standardized value
MYC	ENCODE Transcription Factor Targets	1.0	null
lung	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.17358
keratinocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.120119
Nauplius	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.616
translocon complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.137773
EZH2_fibroblast of lung_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hsa-miR-3671	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
Lipid metabolism disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.361
Adenoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.198
DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.165
COPS5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.16649
hsa-miR-3123	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
Jejunum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.49
SG231	DepMap CRISPR Gene Dependency	1.0	6.71776
5-alpha-Dihydrotestosterone glucuronide	HMDB Metabolites of Enzymes	1.0	null
VMRC-LCD	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.3236
Gastrointestinal system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.976
ZC3H11A_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Uterine Carcinosarcoma_UCS_TCGA-N5-A4RM-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-4489	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
CTCF_mammary epithelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
JJN-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04763
prospore membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.285507
H3K36me3_CH12.LX_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Thalassemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.207
bile	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.419623
membrane-enclosed lumen	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.063314
diarrhea	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.606933
androgen and estrogen metabolism	KEGG Pathways	1.0	null
Nexine	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.262
786O	Achilles Cell Line Gene Essentiality Profiles	1.0	1.20268
CTCF_GM12892_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
endoplasmic reticulum membrane	GO Cellular Component Annotations 2015	1.0	null
bladder	GTEx Tissue Gene Expression Profiles	1.0	0.999305
PMC10011543-41419_2023_5707_MOESM4_ESM.xlsx-genes_with_unique_SNP-F5-Thygro-r__CIC-1n_h-r__CIC-2n_h-r_CIC	Rummagene Transcription Factor Associations 2026	1.0	null
GSE200839,GSE233826_5_v_4_tnrc18_human	RummaGEO Gene Perturbation Signatures	1.0	null
Tuber	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.81
Anemia, Sickle Cell	dbGAP Gene-Trait Associations	1.0	1.55707
CTCF_IMR-90_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Weight Loss	CTD Gene-Disease Associations	1.0	1.33642
RAD21_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TE5	DepMap CRISPR Gene Dependency	1.0	3.48115
Lung adenocarcinoma_LUAD_TCGA-53-7624-01A-11R-2066-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Plasma membrane light-harvesting complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.684
CTCF_astrocyte of the spinal cord_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Agnosia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.357
endomembrane system	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.747285
Epicotyl	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.768
GSE200839,GSE233826_3_v_4_tnrc18_human	RummaGEO Gene Perturbation Signatures	1.0	null
mitochondrion	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.165932
Leaf lamina	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.373
Glycochenodeoxycholic acid 3-glucuronide	HMDB Metabolites of Enzymes	1.0	null
Hepatobiliary system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.662
OVCAR-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0821
cellular_component	GO Cellular Component Annotations 2015	1.0	null
Lung cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.538
DU4475	CCLE Cell Line Gene CNV Profiles	-1.0	-1.81123
Bilirubin	HMDB Metabolites of Enzymes	1.0	null
Colorectal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.673
Neurodegenerative disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.315
intestinal cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.212761
intracellular	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
drug-induced hepatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.248203
MAC2A	DepMap CRISPR Gene Dependency	1.0	2.69518
Stomatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.029
PMC4905481-oncotarget-07-11397-s002.xlsx-Pinin_KD-Unnamed_1_AR	Rummagene Transcription Factor Associations 2026	1.0	null
CTCF_GM12868_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Pollen wall	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.74
H3K27me3_K562_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MIXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.6811
LBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.8153
496100460_TCx_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.60397
Retinol metabolism	KEGG Pathways 2026	1.0	null
SMC3	ENCODE Transcription Factor Targets	1.0	null
HCC1937	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33194
H3K4me1_G1E-ER4_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
Secondary cell wall	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.923
Kidney Chromophobe_KICH_TCGA-KL-8329-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
abdomen	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.075109
Diabetes Mellitus	DisGeNET Gene-Disease Associations	1.0	null
caco-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.15495
H3K36me3_bronchial epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
iec-18 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.348889
Dehydroepiandrosterone 3-glucuronide	HMDB Metabolites of Enzymes	1.0	null
HS695T	CCLE Cell Line Gene CNV Profiles	-1.0	-1.96352
POLR2A_H1-hESC_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H196	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.39029
macromolecular complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.388137
Root cap	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.621
endoplasmic reticulum part	GO Cellular Component Annotations 2015	1.0	null
PATU8988T	DepMap CRISPR Gene Dependency	1.0	3.22603
Vitamin D2 3-glucuronide	HMDB Metabolites of Enzymes	1.0	null
Nicotine_degradation	PANTHER Pathways	1.0	null
H3K27me3_Brain Germinal Matrix	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
cytosolic part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.057689
CTCF_fibroblast of villous mesenchyme_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
3-Methoxy-4-hydroxyphenylglycol glucuronide	HMDB Metabolites of Enzymes	1.0	null
EFM-19	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.912565
NR3C1	JASPAR Predicted Transcription Factor Targets	1.0	null
Defective GSS causes Glutathione synthetase deficiency (GSS deficiency)	Reactome Pathways 2014	1.0	null
HS944T	Achilles Cell Line Gene Essentiality Profiles	1.0	1.03484
Specific developmental disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.38
17-beta-Estradiol glucuronide	HMDB Metabolites of Enzymes	1.0	null
Hypotrichosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.38
25-Hydroxyvitamin D2-25-glucuronide	HMDB Metabolites of Enzymes	1.0	null
hsa-miR-518a-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
COLO 679	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00429
Prostate adenocarcinoma_PRAD_TCGA-EJ-7785-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PKNOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.2887
Apical tubulobulbar complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.004
RAD21_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TCF12_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Disease	Reactome Pathways 2014	1.0	null
Intrahepatic cholestasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.546
HCC1954	Achilles Cell Line Gene Essentiality Profiles	1.0	1.56614
HCT-116	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Proteinuria	CTD Gene-Disease Associations	1.0	1.13963
Hepatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.82
kernicterus	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.36204
Urine	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.453
Cognition Disorders	CTD Gene-Disease Associations	1.0	1.43184
Triglycerides Measurement	DisGeNET Gene-Phenotype Associations	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-EP-A2KC-01A-11R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
YY1_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RAD21_ECC-1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H889	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.98005
vagina	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.224893
H3K4me1_ES-Bruce4_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
ONDANSETRON HYDROCHLORIDE	DGIdb Drug Targets 2026	1.0	0.294067
Melanoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.037
Eye disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.305
Sieve tube	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.69
Carcinoma, Hepatocellular	CTD Gene-Disease Associations	1.0	1.03976
digestive juice	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.17116
Alcohol use disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.164
organelle lumen	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.069267
Bilirubin levels	GWAS Catalog SNP-Phenotype Associations 2025	1.0	6.35229
Acute Kidney Injury	CTD Gene-Disease Associations	1.0	1.36504
YY1_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Defective OPLAH causes 5-oxoprolinase deficiency (OPLAHD)	Reactome Pathways 2014	1.0	null
hsa-miR-3646	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
digestive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.66085
Migraine	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.033
NKX6-2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9496
NR4A2-19515692-MN9D-mouse	ChEA Transcription Factor Binding Site Profiles	1.0	null
CTCF_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Bilirubin, Serum Level Of, Quantitative Trait Locus 1	DisGeNET Gene-Phenotype Associations	1.0	null
pentose and glucuronate interconversions	KEGG Pathways	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-56-A4ZK-01A-11R-A262-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CAPAN1	CCLE Cell Line Gene CNV Profiles	1.0	1.40126
HCC1263	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.988224
Renal cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.02
CTCF_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H2342	COSMIC Cell Line Gene Mutation Profiles	1.0	null
OVKATE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.78254
Liver hepatocellular carcinoma_LIHC_TCGA-NI-A8LF-01A-11R-A36F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ETV5::FOXO1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.1929
Lung squamous cell carcinoma_LUSC_TCGA-56-8629-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SNU-638	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.90497
Hepatocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.383
MSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.8325
DLX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.8797
H3K4me3_Duodenum Mucosa	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
H3K27me3_Neurosphere Cultured Cells Cortex Derived	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.158
MAZ_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
OELE	Achilles Cell Line Gene Essentiality Profiles	-1.0	-1.23939
ERF::NHLH1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.3095
ZNF274	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.9562
Bile duct disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.886
DV-90	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles	1.0	null
Drug-Related Side Effects and Adverse Reactions	CTD Gene-Disease Associations	1.0	1.48582
thioredoxin-disulfide reductase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.964
Lung squamous cell carcinoma_LUSC_TCGA-63-A5M9-01A-11R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Stomach disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.198
Plant bud	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.979
RAD21_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MYOG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.6302
CTCF_T47D_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RAD21_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
2-Phenylethanol glucuronide	HMDB Metabolites of Enzymes	1.0	null
CTDK-1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.921
Respiratory mucus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.563
CTCF_HepG2_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
bronchoalveolar system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.290652
Aspergillosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.264
plant-type vacuole membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.298
Pituitary gonadotropin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.928
Gaucher Disease	DisGeNET Gene-Disease Associations	1.0	null
plant-type vacuole	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.271
Lung non-small cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.206
endocrine system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.053888
FOS_MCF 10A_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_GM12874_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ZNF384	ENCODE Transcription Factor Targets	1.0	null
Storage tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.547
inherited metabolic disorder	GWASdb SNP-Disease Associations	1.0	0.270878
MOGGUVW	DepMap CRISPR Gene Dependency	1.0	2.68798
CTCF_mammary epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_GM19238_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_HeLa-S3_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
NCI-H1944	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles	1.0	null
hypocotyl	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.265038
Psychotic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.152
Acn	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.874
RL95-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ZNF263_HEK293_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Olfactory nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.577
PRRX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7319
H2AFZ_astrocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SRF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.9895
CUX1_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_fibroblast of gingiva_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ACHN	Achilles Cell Line Gene Essentiality Profiles	1.0	1.29299
Pharate pupa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.558
fascioliasis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.341639
OVKATE	CCLE Cell Line Gene CNV Profiles	1.0	1.64156
thalassemia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.379626
Congenital dyserythropoietic anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.1
disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.30925
kidney cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.616183
Lucey-Driscoll Syndrome (Disorder)	DisGeNET Gene-Disease Associations	1.0	null
Isovalerylglucuronide	HMDB Metabolites of Enzymes	1.0	null
Fetal serum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.632
Photosystem II	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.95
immune system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.456732
Estradiol	HMDB Metabolites of Enzymes	1.0	null
mouth	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.05987
FOSL2	ENCODE Transcription Factor Targets	1.0	null
TBXT	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.5406
FESOTERODINE	DGIdb Drug Targets 2026	1.0	0.392089
17-alpha-Estradiol-3-glucuronide	HMDB Metabolites of Enzymes	1.0	null
REST_SK-N-SH_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
11-beta-Hydroxyandrosterone-3-glucuronide	HMDB Metabolites of Enzymes	1.0	null
Respiratory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.863
Adventitious root	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.074
skin disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.056072
Estriol-3-glucuronide	HMDB Metabolites of Enzymes	1.0	null
intestinal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.09474
CTCF_A549_hg19_8	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-KU-A66S-01A-21R-A30B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE167956_4_v_0_trim28_human	RummaGEO Gene Perturbation Signatures	-1.0	null
ESRRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.2134
cell part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.26339
H3K4me3_G1E_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
flavonoid biosynthetic process	GO Biological Process Annotations 2015	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-G3-AAV2-01A-11R-A37K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TBX19	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.202
JL1	CCLE Cell Line Gene CNV Profiles	1.0	1.52858
CTCF_MCF-7_hg19_9	ENCODE Transcription Factor Binding Site Profiles	1.0	null
bilirubin metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	2.28212
Benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.275
intracellular organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.349105
Testosterone sulfate	HMDB Metabolites of Enzymes	1.0	null
Nervous System Malformations	CTD Gene-Disease Associations	1.0	1.05274
Lung squamous cell carcinoma_LUSC_TCGA-77-8150-01A-11R-2247-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
parasitic helminthiasis infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.212608
ACETAMINOPHEN	DGIdb Drug Targets 2026	1.0	0.117627
HOXA6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.1613
SKNO1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.40695
Gonadal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.356
Photosynthetic membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.156
NCIH510	CCLE Cell Line Gene CNV Profiles	1.0	2.25864
Icterus	DisGeNET Gene-Phenotype Associations	1.0	null
COVID-19	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.068
HDAC1	ENCODE Transcription Factor Targets	1.0	null
4-aminobutyrate transaminase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.627
Kidney cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.12
PMC5703746-Table1.XLSX-ST6_MAF-GENE_MAF	Rummagene Transcription Factor Associations 2026	1.0	null
trunk	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.14609
Lung adenocarcinoma_LUAD_TCGA-86-A4D0-01A-11R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DMPK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07076
colonic cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.966793
endoplasmic reticulum	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
intracellular membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
ALX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7769
Amino acid metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.119
Aldosterone 18-glucuronide	HMDB Metabolites of Enzymes	1.0	null
single-organism carbohydrate metabolic process	GO Biological Process Annotations 2015	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-18-3416-01A-01R-0980-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
COLO205	Achilles Cell Line Gene Essentiality Profiles	-1.0	-1.40948
hsa-miR-200a	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
H3K36me3_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-AL-3473-01A-01R-1193-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.204
Liver hepatocellular carcinoma_LIHC_TCGA-RC-A6M4-01A-11R-A32O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
COLO 741	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.15239
nctc-2544 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.259591
adipose tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.245807
Withdrawal disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.266
Pulmonary hypertension	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.161
Brain Lower Grade Glioma_LGG_TCGA-HT-A74O-01A-11R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Breast cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.572
HEP G2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.58212
hsa-miR-4742-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
small intestine mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.534647
GSE152734,GSE152735_2_v_0_pbrm1_human	RummaGEO Gene Perturbation Signatures	1.0	null
Nymph	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.681
mRNA_DPPA5A_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
OC-314	COSMIC Cell Line Gene Mutation Profiles	1.0	null
THP1	DepMap CRISPR Gene Dependency	1.0	2.03503
Histone locus body	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.248
NO11	DepMap CRISPR Gene Dependency	1.0	2.71159
Ovarian cyst	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.625
TEAD4	ENCODE Transcription Factor Targets	1.0	null
IP6K1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.79516
NCIN87	DepMap CRISPR Gene Dependency	1.0	2.28773
bacteroid-containing symbiosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.523
CH157MN	Achilles Cell Line Gene Essentiality Profiles	1.0	1.57661
PK-15 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.715
Rectal cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.671
disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.50798
H3K9ac_keratinocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
transferase activity	GO Molecular Function Annotations 2015	1.0	null
YY1_HCT116_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NR1I3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.2586
H3K4me3_G1E-ER4_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
PHH	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.617
pharynx	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.096319
Mouth disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.137
RAD21_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
blood plasma	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.20867
ZNF143_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NNAL-N-glucuronide	HMDB Metabolites of Enzymes	1.0	null
carbohydrate metabolic process	GO Biological Process Annotations 2015	1.0	null
hsa-miR-371-5p	TargetScan Predicted Conserved microRNA Targets	1.0	0.31417
EJM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.77825
Fruit	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.927
nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.578816
H3K27me3_G1E_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
whole body	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.1692
organic acid metabolic process	GO Biological Process Annotations 2015	1.0	null
Floral primordium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.607
Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-7058-01A-11R-1965-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Hearing Loss	HuGE Navigator Gene-Phenotype Associations	1.0	null
intrinsic component of membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
vitelline envelope	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.236324
CTCF_HL-60_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
patu8988t	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.859
NCI-H1623	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.2314
Glycogen Storage Disease	DisGeNET Gene-Disease Associations	1.0	null
Cerebral palsy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.034
hepatocellular carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.658818
parenchymal cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.579216
MPP89	CCLE Cell Line Gene CNV Profiles	-1.0	-3.20895
nutrition disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.099371
Wilson disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.145
STAT1	ENCODE Transcription Factor Targets	1.0	null
methylprednisolone_rattus norvegicus_gpl85_gds253	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Glucuronidation(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
hsa-miR-141	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
MYC_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
REST	ENCODE Transcription Factor Targets	1.0	null
Chloroplast	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.382
Bone remodeling disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.196
catalytic activity	GO Molecular Function Annotations 2015	1.0	null
Serum metabolite levels	GWAS Catalog SNP-Phenotype Associations 2025	1.0	3.30969
Ehlers-Danlos syndrome spondylodysplastic type 2	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.258
CTCF_BJ_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
small molecule metabolic process	GO Biological Process Annotations 2015	1.0	null
hematopoietic system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.19089
NCIH226	DepMap CRISPR Gene Dependency	1.0	8.28566
Lung squamous cell carcinoma_LUSC_TCGA-77-8148-01A-11R-2247-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Alopecia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.391
CTCF_fibroblast of mammary gland_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CREB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.5896
CRO-AP2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
H2AFZ_keratinocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CHP126	CCLE Cell Line Gene CNV Profiles	1.0	1.84401
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-JW-A5VK-01A-11R-A28H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Obesity	DisGeNET Gene-Disease Associations	1.0	null
Thylakoid membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.991
THP1	Achilles Cell Line Gene Essentiality Profiles	-1.0	-1.78427
CTCF_HeLa-S3_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Male reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.271
H3K27me3_heart_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Bronchial disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.363
WRNIP1	ENCODE Transcription Factor Targets	1.0	null
Choledocholithiasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.179
ME1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.7587
EZH2_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_GM12878_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
organelle part	GO Cellular Component Annotations 2015	1.0	null
lymphoid tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.24804
OCIAML2	Achilles Cell Line Gene Essentiality Profiles	-1.0	-1.38605
Obstructive jaundice	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.052
Liver hepatocellular carcinoma_LIHC_TCGA-CC-A7IL-01A-11R-A33R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
EOMES	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.599
Micronuclei, Chromosome-Defective	CTD Gene-Disease Associations	1.0	1.08266
3-alpha-hydroxy-5-alpha-androstane-17-one 3-D-glucuronide	HMDB Metabolites of Enzymes	1.0	null
mammary gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.434906
stomach	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.510599
colonic adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.967657
MNT	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.6784
Skin Callus	DisGeNET Gene-Disease Associations	1.0	null
Root primordium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.626
Genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.408
VAX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.6268
receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.064069
CTCF_HCT116_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Root hair tip	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.794
MDA-MB-330	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2203
11-Hydroxyprogesterone 11-glucuronide	HMDB Metabolites of Enzymes	1.0	null
cytoskeletal part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.043802
CREB1	JASPAR Predicted Transcription Factor Targets	1.0	null
Rhizome	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.266
bounding membrane of organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.067725
Root tip	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.355
proteasome regulatory particle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.329837
Peripheral nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.49
Nausea	CTD Gene-Disease Associations	1.0	1.01062
Autoimmune disease of musculoskeletal system	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.121
Metabolic acidosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.197
KYSE220	DepMap CRISPR Gene Dependency	1.0	2.11737
anemia, sickle cell	GAD Gene-Disease Associations	1.0	null
GSE220668_0_v_1_ncapg_human	RummaGEO Gene Perturbation Signatures	1.0	null
patu8988s	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.119
Hepatopancreas	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.849
ovary	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.402144
Syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.472
Cell type benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.218
Colorectal adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.683
nucleotide-excision repair factor 2 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.926
endocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.4147
HNF4G	ENCODE Transcription Factor Targets	1.0	null
Vascular tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.491
colorectal cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.182507
hsa-miR-330-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
Bilirubin Level Result	DisGeNET Gene-Phenotype Associations	1.0	null
Metabolic dysfunction-associated steatohepatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.17
Apical plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.659
CTCF_choroid plexus epithelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Systemic mycosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.243
KE39	CCLE Cell Line Gene CNV Profiles	1.0	1.63697
Liver cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.658
Dopamine glucuronide	HMDB Metabolites of Enzymes	1.0	null
liver carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.656441
HOXA7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40803
Colorectal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.846
Bladder Urothelial Carcinoma_BLCA_TCGA-E7-A7PW-01A-11R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cell type cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.552463
Toxic encephalopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.625
RH18	CCLE Cell Line Gene CNV Profiles	1.0	3.2257
male reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.522273
Brush border membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.916
root culture	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.187182
intestinal epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.397222
mesentery	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.176988
Intervertebral disc	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.813
Lung disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.752
CHD1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Alzheimer's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.014
CTCF_GM13977_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Crigler-Najjar syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.94
EFM-192C	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.15127
Bone resorption disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.159
Renal carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.076
MYOD1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.3378
Estriol 3-sulfate 16-glucuronide	HMDB Metabolites of Enzymes	1.0	null
UBTF_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Increased Bilirubin Level (Finding)	DisGeNET Gene-Phenotype Associations	1.0	null
ESR1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.3123
496100458_FWM_no dementia_no TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.13487
PMC8519939-41525_2021_248_MOESM5_ESM.xlsx-NFE2L2_V2-Gene_name_NFE2L2	Rummagene Transcription Factor Associations 2026	1.0	null
H3K4me1_keratinocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Photosystem II oxygen evolving complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.708
HS852T	CCLE Cell Line Gene CNV Profiles	-1.0	-1.51639
cell part	GO Cellular Component Annotations 2015	1.0	null
embryo	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.428018
membrane region	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.132391
melanoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.059834
GSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.1865
HOXC8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.5833
MAFK	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.1248
Drug metabolism - cytochrome P450	KEGG Pathways 2026	1.0	null
Sickle cell anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.105
SRY	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.7857
Uterine disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.237
NCI-H2009	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.3236
Thyroxine glucuronide	HMDB Metabolites of Enzymes	1.0	null
Nutrition disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.703
BARX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7789
CTCF_Caco-2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Uterine Carcinosarcoma_UCS_TCGA-N9-A4Q7-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Blood serum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.954
PMC8528285-pbio.3001085.s010.xlsx-Fig_7A-MLX_TESTES_MLX	Rummagene Transcription Factor Associations 2026	1.0	null
ZSCAN16	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.9648
TCF12	ENCODE Transcription Factor Targets	1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-HZ-8638-01A-11R-2404-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HCE4	DepMap CRISPR Gene Dependency	1.0	3.21031
L-5178-Y cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.911
Artery disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.825
DMS 79	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.887929
CTCF_kidney_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
juice	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.58322
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2203
GSE228106_3_v_1_paclitaxel_human	RummaGEO Drug Perturbation Signatures	1.0	null
HOXB2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.2605
starch and sucrose metabolism	KEGG Pathways	1.0	null
Glutathione hydrolase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.606
TLX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.3208
crigler-najjar syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	2.15613
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6940-01A-11R-1915-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KYSE410	CCLE Cell Line Gene CNV Profiles	-1.0	-1.52932
Hair greying	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.51549
SP1_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SNU245	CCLE Cell Line Gene CNV Profiles	1.0	2.0058
H3K27me3_Brain Hippocampus Middle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
seed	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.251606
light-harvesting complex, core complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.683
Shell gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.546
HCC1187	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2999-03B-01T-0748-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GATA3	JASPAR Predicted Transcription Factor Targets	1.0	null
SNU-449	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CTCF_astrocyte of the spinal cord_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
colonic epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.162345
Neural Tube Defects	CTD Gene-Disease Associations	1.0	1.05423
cellular response to chemical stimulus	GO Biological Process Annotations 2015	1.0	null
UNCX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.6984
GSE143782_6_v_5_calcitriol_human	RummaGEO Drug Perturbation Signatures	1.0	null
TBL1XR1	ENCODE Transcription Factor Targets	1.0	null
MAFK_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hepatoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.08457
CTCF_fibroblast of lung_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
B875 antenna complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.683
Trichome	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.175
Pole plasm	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.332
OSC19	DepMap CRISPR Gene Dependency	1.0	4.65286
developmental disorder of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.046326
Chronic kidney disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.621
Invasive aspergillosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.41
LNCAP-CLONE-FGC	COSMIC Cell Line Gene Mutation Profiles	1.0	null
E2F4_MCF 10A_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
disease by infectious agent	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.269753
ARID3A	ENCODE Transcription Factor Targets	1.0	null
H2869	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Mineral metabolism disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.003
CTCF_HEK293_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
intracellular part	LOCATE Predicted Protein Localization Annotations	1.0	null
MOTN1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.37755
Hepatic encephalopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.013
Phase II conjugation	Reactome Pathways 2014	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-D6-A4ZB-01A-11R-A24Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-85-8354-01A-31R-2326-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
respiratory system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.361133
Hematopoietic system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.035
CTCF_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
G140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.860412
Dubin-Johnson syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.87
TBX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.0983
Head kidney	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.626
SMC3_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-CF-A47Y-01A-11R-A23W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Plasmodesma	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.69
mitochondrial fatty acid beta-oxidation multienzyme complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.236324
biliary tract disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.838476
H3K4me3_megakaryocyte_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
Influenza	DisGeNET Gene-Disease Associations	1.0	null
CTCF_fibroblast of foreskin _hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A73E-01A-12R-A32O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-ED-A4XI-01A-11R-A266-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TP63-22573176-HFKS-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
H3K36me3_liver_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
lung cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.383708
kidney hypertrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.292257
Primary root	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.151
rectal cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.985859
Benign recurrent intrahepatic cholestasis 1	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.607
cell culture	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.738854
Intestinal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.902
Duodenum Mucosa	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	-1.0	-0.981686
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2256
Carbohydrate metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.956
GPR161	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.77095
15-Hydroxynorandrostene-3,17-dione glucuronide	HMDB Metabolites of Enzymes	1.0	null
prostate gland cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.490619
CTCF_WI38_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Substance dependence	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.041
single-organism cellular process	GO Biological Process Annotations 2015	1.0	null
duodenum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.868529
tissues, cell types and enzyme sources	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.18293
Morphine-6-glucuronide	HMDB Metabolites of Enzymes	1.0	null
Throat	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.944
SLR21	Achilles Cell Line Gene Essentiality Profiles	1.0	1.67405
NCIH196	CCLE Cell Line Gene CNV Profiles	-1.0	-2.03683
plant parenchyma	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.419623
Portal vein	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.502
CTCF_fibroblast of lung_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
1-Salicylate glucuronide	HMDB Metabolites of Enzymes	1.0	null
BRCA1	ENCODE Transcription Factor Targets	1.0	null
hairy root culture	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.315135
Brain capillary endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.546
UBTF	ENCODE Transcription Factor Targets	1.0	null
Cardiovascular Diseases	HuGE Navigator Gene-Phenotype Associations	1.0	null
Desbuquois dysplasia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.139
LHX9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.4917
Atherosclerosis	CTD Gene-Disease Associations	1.0	1.38384
Disease of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.837
496100367_FWM_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.68243
H2AFZ_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
animal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.18188
NDUFA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.01001
organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
CTCF_GM12875_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SP1	ENCODE Transcription Factor Targets	1.0	null
Fatty Liver	CTD Gene-Disease Associations	1.0	1.45063
MAX_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Inodxyl glucuronide	HMDB Metabolites of Enzymes	1.0	null
Rectal Mucosa Donor 31	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	1.0	1.36723
hepatoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.440274
Colon cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.465
adrenal gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.337808
membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
CTCF_fibroblast of foreskin _hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Tyramine glucuronide	HMDB Metabolites of Enzymes	1.0	null
NCI-H1915	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1101
CTCF_GM12875_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Colonic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.474
pituitary	GTEx Tissue Gene Expression Profiles	-1.0	-1.54289
Cardiovascular system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.971
GATA1	ChEA Transcription Factor Targets	1.0	null
gastrointestinal cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.250301
organelle outer membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.115976
hepatobiliary disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.995283
CTCF_GM13976_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ASPC1	Achilles Cell Line Gene Essentiality Profiles	-1.0	-1.37825
Autoimmune disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.551
ovary cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.060612
epithelioma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.06912
feather	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.195249
CTCF_MCF-7_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
xenobiotic metabolic process	GO Biological Process Annotations 2015	1.0	null
NCIH209	CCLE Cell Line Gene CNV Profiles	1.0	1.54464
TFAP4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.1914
Ascorbate and aldarate metabolism	KEGG Pathways 2026	1.0	null
Coronary artery disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.473
CTCF_GM12870_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hearing loss	GAD Gene-Disease Associations	1.0	null
TEAD4_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC38	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.988224
Cholic acid glucuronide	HMDB Metabolites of Enzymes	1.0	null
HCFC1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Hair disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.396
H3K27me3_endothelial cell of umbilical vein_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Generalized Glycogen Storage Disease Of Infants	DisGeNET Gene-Disease Associations	1.0	null
MAF::NFE2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.5661
Liver hepatocellular carcinoma_LIHC_TCGA-G3-A5SL-01A-11R-A27V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-CH-5767-01A-11R-1789-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MAZ	ENCODE Transcription Factor Targets	1.0	null
plant embryo	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.263327
urinary bladder cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.530768
Plant ear	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.783
Retinoyl b-glucuronide	HMDB Metabolites of Enzymes	1.0	null
CAL 54	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.961767
Kidney Chromophobe_KICH_TCGA-KN-8426-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
extrahepatic cholestasis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.167224
OVK18	CCLE Cell Line Gene CNV Profiles	-1.0	-1.54486
CTCF_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Common bile duct disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.178
496100391_FWM_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.1708
Coronavirus infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.066
EN1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1869
Myocardial infarction	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.342
Edema	HuGE Navigator Gene-Phenotype Associations	1.0	null
CTCF_CD14-positive monocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Bile duct epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.218
Water	HMDB Metabolites of Enzymes	1.0	null
LLC-PK1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.666
Plastid	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.459
H3K4me1_G1E_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
Haustorium	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.629
N-desmethylclozapine concentration in schizophrenia	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.81549
Peritrophic membrane	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.505
Central vacuole	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.007
SW48	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Intestinal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.846
Retinal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.067
N-DESMETHYLCLOZAPINE	DGIdb Drug Targets 2026	1.0	0.367583
H3K27me3_fibroblast of lung_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_H1-hESC_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_fibroblast of the aortic adventitia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_HepG2_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_epithelial cell of esophagus_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Bone marrow disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.01
lymphoid cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053357
Myrosin cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.77
urinary system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.343106
17638893-SuppTable1	GeneSigDB Published Gene Signatures	1.0	null
Lung adenocarcinoma_LUAD_TCGA-93-A4JQ-01A-11R-A24X-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
kidney disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.048292
KYSE-270	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.28701
plhc-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.257572
forelimb	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.073033
phenotypic abnormality	GWASdb SNP-Phenotype Associations	1.0	0.029983
Portal hypertension	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.105
mcf-7 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.232039
adult	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.956859
ChIP_SETDB1_19884257	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
BL-70	COSMIC Cell Line Gene Mutation Profiles	1.0	null
v-79 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.57699
NCI-H23	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A39W-01A-11R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-4790-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
Elevated Total Bilirubin	DisGeNET Gene-Phenotype Associations	1.0	null
Morphine	HMDB Metabolites of Enzymes	1.0	null
Brain disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.937
G130	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.98005
gastrointestinal tract	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.63406
H2AFZ_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hyperuricemia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.199356
Glucuronidation	WikiPathways Pathways 2024	1.0	null
Bulbourethral gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.559
PMC8528285-pbio.3001085.s010.xlsx-Fig_S7A-GENE_LIST_UPLOADED_TO_ENRICHR_MLX_TESTES_855_GENES_MLX	Rummagene Transcription Factor Associations 2026	1.0	null
Defective UGT1A1 causes hyperbilirubinemia	Reactome Pathways 2014	1.0	null
Dehydroisoandrosterone 3-glucuronide	HMDB Metabolites of Enzymes	1.0	null
external encapsulating structure	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.071063
amino acid metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.084822
H3K9ac_liver_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
mRNA_ESX1_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
FOS	ENCODE Transcription Factor Targets	1.0	null
cellular glucuronidation	GO Biological Process Annotations 2015	1.0	null
Congestive heart failure	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.212
Liver hepatocellular carcinoma_LIHC_TCGA-CC-A5UD-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
male reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.849585
Hepa-RG cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.475
1-(alpha-Methyl-4-(2-methylpropyl)benzeneacetate)-beta-D-Glucopyranuronic acid	HMDB Metabolites of Enzymes	1.0	null
TWIST1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.289
VALPROIC ACID	DGIdb Drug Targets 2026	1.0	0.0996836
urinary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.044984
CTCF_SK-N-SH_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MDAMB361	DepMap CRISPR Gene Dependency	1.0	5.59486
adenoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.323002
CTCF_GM12864_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cellular process	GO Biological Process Annotations 2015	1.0	null
thoracic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.466928
Neck	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.913
MYF5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.6181
HCC1395	CCLE Cell Line Gene CNV Profiles	1.0	2.1743
Glycoprotein network	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.394
Paralysis	CTD Gene-Disease Associations	1.0	1.30941
SMAD3-18955504-HaCaT-human	ChEA Transcription Factor Binding Site Profiles	1.0	null
Lung adenocarcinoma_LUAD_TCGA-55-8089-01A-11R-2241-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
4-(Methylnitrosamino)-1-(3-pyridyl)-1-butanol	HMDB Metabolites of Enzymes	1.0	null
Pericycle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.949
Sclerosing cholangitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.04
Brain Lower Grade Glioma_LGG_TCGA-TM-A7CF-02A-11R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZC3H11A	ENCODE Transcription Factor Targets	1.0	null
COR-L47	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82238
non-Hodgkin lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.049
Blood plasma	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.459
CP66-MEL	COSMIC Cell Line Gene Mutation Profiles	1.0	null
troglitazone_rattus norvegicus_gpl341_liver_gds3850	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Mesothelioma_MESO_TCGA-LK-A4O2-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Hypertension	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.739
CTCF_HEK293_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Bladder disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.069
mRNA_ID1_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
TBR1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.6256
H3K9me3_megakaryocyte_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
detroit 562 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.219928
Diabetic ketoacidosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.029
HOXB8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.6597
GTF2F1_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Storage root	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.18
Estriol-16-Glucuronide	HMDB Metabolites of Enzymes	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-TT-A6YP-01A-21R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
connective tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.609735
viscus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.46027
CTCF_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
C32	CCLE Cell Line Gene CNV Profiles	-1.0	-1.59351
KINGS1	DepMap CRISPR Gene Dependency	1.0	2.0126
abnormality of metabolism/homeostasis	GWASdb SNP-Phenotype Associations	1.0	0.069925
glucuronosyltransferase activity	GO Molecular Function Annotations 2015	1.0	null
NCIH1623	CCLE Cell Line Gene CNV Profiles	1.0	1.46395
Jejunal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.51
PANC 08.13	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.860412
hsa-miR-148a	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
CTCF_fibroblast of the aortic adventitia_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
blood	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.17092
EP300_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cytoplasmic part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.2905
Precancerous Conditions	CTD Gene-Disease Associations	1.0	1.21304
End stage renal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.272
SNU-449	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.961767
Skin Cutaneous Melanoma_SKCM_TCGA-ER-A19O-06A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MAFK_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_HGPS cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Genetic Predisposition to Disease	HuGE Navigator Gene-Phenotype Associations	1.0	null
SK-LMS-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.764
CTCF_GM12866_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lung adenocarcinoma_LUAD_TCGA-49-4514-01A-21R-1858-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Hepa-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.901
methylprednisolone_rattus norvegicus_gpl85_gds965	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
nuclear part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.045215
496100420_PCx_probable Alzheimer's disease_no TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.69967
Glucuronidation	Reactome Pathways 2014	1.0	null
Serum Ldl Cholesterol Measurement	DisGeNET Gene-Phenotype Associations	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-E7-A97Q-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Zona reticulata	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.545
H3K27me3_G1E-ER4_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RPMI 8226	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04763
autosomal dominant disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.046937
Deoxycholic acid 3-glucuronide	HMDB Metabolites of Enzymes	1.0	null
Liver carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.582
Defective AHCY causes Hypermethioninemia with S-adenosylhomocysteine hydrolase deficiency (HMAHCHD)	Reactome Pathways 2014	1.0	null
Rectum cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.025
Codeine-6-glucuronide	HMDB Metabolites of Enzymes	1.0	null
LBP-1	MotifMap Predicted Transcription Factor Targets	1.0	null
epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.650154
CTCF_WI38_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
M059K	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05893
mRNA_KLF4_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
JL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.30879
hsa-miR-4652-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
cytoskeletal calyx	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.177439
Lung adenocarcinoma_LUAD_TCGA-62-A470-01A-11R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Fruit juice	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.026
EMX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1925
Larsen-like syndrome B3GAT3 type	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.502
ETV2::DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.1024
EP300	ENCODE Transcription Factor Targets	1.0	null
cos cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.927192
hepa-1c1c7 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.696581
Fibrillar collagen trimer	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.512
Benign recurrent intrahepatic cholestasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.308
mRNA_MSC_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
ISX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.1514
PRRX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.0255
POLR2A	ENCODE Transcription Factor Targets	1.0	null
bile duct	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.663962
intracellular organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
ZBTB18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.9723
VSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.0662
hsa-miR-3908	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
SMAD4	ChEA Transcription Factor Targets	1.0	null
Clitoris	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.598
membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.08679
H3K4me1_erythroblast_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
lung cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.065251
central nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.278297
Epinephrine glucuronide	HMDB Metabolites of Enzymes	1.0	null
Large intestine cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.848
SLU7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.10788
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-6997-01A-11R-2016-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KLE	DepMap CRISPR Gene Dependency	1.0	3.01239
PMC9534852-41598_2022_20572_MOESM4_ESM.xlsx-Sheet1-Supplementary_Table_S4_Transcriptomic_data_related_to_AHR_function_considered_for_metabolic_reconstruction_model_generation_AHR	Rummagene Transcription Factor Associations 2026	1.0	null
disease of metabolism	GWASdb SNP-Disease Associations	1.0	0.150737
plant form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.295297
Symplast	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.037
CTCF_GM12878_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
urine	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.18512
Liver cirrhosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.718
Bladder Urothelial Carcinoma_BLCA_TCGA-BT-A20P-01A-11R-A14Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CTCF_retinal pigment epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Growing cell tip	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.069
YKG1	Achilles Cell Line Gene Essentiality Profiles	-1.0	-1.56484
CTCF_GM12868_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
endoplasmic reticulum lumen	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.356705
Tauopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.009
H3K4me3_megakaryocyte_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
Urinary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.893
gonad	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.594853
granulomatous hepatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.411657
PAREGORIC	DGIdb Drug Targets 2026	1.0	0.202805
Prostate adenocarcinoma_PRAD_TCGA-KK-A6E1-01A-11R-A311-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Bilirubin diglucuronide	HMDB Metabolites of Enzymes	1.0	null
Xanthine dehydrogenase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.744
organelle membrane	GO Cellular Component Annotations 2015	1.0	null
Congenital dyserythropoietic anemia type II	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.046
Plant hair	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.535
Taproot	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.635
Autoimmune Hepatitis	DisGeNET Gene-Disease Associations	1.0	null
Stele	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.655
RAD21_IMR-90_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SMC3_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_kidney epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
bile duct disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.842982
Cotton fibre	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.098
CTCF_fibroblast of gingiva_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A3A4-01A-11R-A22L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.821502
rectum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.184153
Amylin receptor complex 3	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.57
Obesity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.666
CTCF_A549_hg19_10	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Rind	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.562
EOL-1-CELL	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Sarcoma_SARC_TCGA-DX-A3LS-01A-11R-A21T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
proton-transporting V-type ATPase, V1 domain	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.754
Cooley'S Anemia	DisGeNET Gene-Disease Associations	1.0	null
Placental membrane	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.401
colon cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.705547
Blood coagulation disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.496
head	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.680248
Lung squamous cell carcinoma_LUSC_TCGA-63-5128-01A-01R-1443-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CTCF_K562_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Estriol-17-glucuronide	HMDB Metabolites of Enzymes	1.0	null
Immune system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.786
BRCA1_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EBC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.1151
Dextrorphan O-glucuronide	HMDB Metabolites of Enzymes	1.0	null
hsa-miR-3163	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
l35	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.61
Hyperplasia	CTD Gene-Disease Associations	1.0	1.48351
H3K27ac_liver_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
cytoplasm	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.25601
Lung squamous cell carcinoma_LUSC_TCGA-56-7823-01B-11R-2247-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SIX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.1724
Bladder Urothelial Carcinoma_BLCA_TCGA-G2-A2EC-01A-11R-A180-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
intracellular part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.27558
Learning Disorders	CTD Gene-Disease Associations	1.0	1.21304
GATA1-19941827-MEL-mouse	ChEA Transcription Factor Binding Site Profiles	1.0	null
Cholangiocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.226
disease	GWASdb SNP-Disease Associations	1.0	0.026852
Androsterone	HMDB Metabolites of Enzymes	1.0	null
CTCF_skeletal muscle myoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Metal metabolism disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.166
epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.753297
Allergic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.489
Neonatal abstinence syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.311
CTCF_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
non-small cell lung cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.10868
HL-60/MX-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.524
Primary immunodeficiency disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.567
ZBTB6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.2034
Hereditary spherocytosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.678
proteasome complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.273367
organelle envelope	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.095842
CTCF_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MESSA	CCLE Cell Line Gene CNV Profiles	-1.0	-1.50417
Shoot apical meristem	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.879
MC-CAR	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GS-A9TV-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Digestive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.742
NCIH1437	Achilles Cell Line Gene Essentiality Profiles	1.0	1.07804
b-lymphoblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.110327
Endocuticle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.555
ASPC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.961767
SMAD3	ChEA Transcription Factor Targets	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7418-01A-11R-2081-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RISPERIDONE	DGIdb Drug Targets 2026	1.0	0.0891111
fibroblast cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.70108
CTCF_choroid plexus epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Autosomal genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.576
TBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.0019
SMC3_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_retinal pigment epithelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
colonic cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.175614
neck	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.19756
Infection By Cryptococcus Neoformans	DisGeNET Gene-Disease Associations	1.0	null
bilirubin metabolic disorder	GWASdb SNP-Disease Associations	1.0	1.30936
oxoacid metabolic process	GO Biological Process Annotations 2015	1.0	null
flavonoid metabolic process	GO Biological Process Annotations 2015	1.0	null
hsa-miR-559	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.921135
Hematologic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.504
Bract	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.733
Viral infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.835
CTCF_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Nervous system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.188
egg coat	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.132833
sf-9 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.267791
liver disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.770844
Dermatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.009
TOV-112D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.961767
RRAS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.10328
colonic adenoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.321685
Intracellular canaliculus	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.89
Hepatobiliary disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.223
Vacuolar proton-transporting V-type ATPase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.517
disease of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.226952
CW-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
LYL1-20887958-HPC-7-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
Viral hepatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.372
Hyperglycemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.361
SUMO activating enzyme complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.071
CTCF_GM19240_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.269043
duodenal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.529903
H2AFZ_skeletal muscle myoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lung Neoplasms	CTD Gene-Disease Associations	1.0	1.17464
Tuberculosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.446
CTCF_fibroblast of pulmonary artery_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cholelithiasis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.504207
CTCF_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MAZ_IMR-90_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BCL3_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Low density lipoprotein cholesterol levels	GWAS Catalog SNP-Phenotype Associations 2025	1.0	1.20969
hsa-miR-1972	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
CTCF_bronchial epithelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_endothelial cell of umbilical vein_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
proton-transporting two-sector ATPase complex, catalytic domain	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.559
Reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.678
SMC3_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EZH2	ENCODE Transcription Factor Targets	1.0	null
Congenital hemolytic anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.514
UDP-glucuronosyl/UDP-glucosyltransferase	InterPro Predicted Protein Domain Annotations	1.0	null
TP63	ChEA Transcription Factor Targets	1.0	null
transferase activity, transferring hexosyl groups	GO Molecular Function Annotations 2015	1.0	null
cellular metabolic process	GO Biological Process Annotations 2015	1.0	null
hek-293 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.863891
SW 948	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.42178
Musculoskeletal system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.004
Cholestasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.001
intracellular organelle part	GO Cellular Component Annotations 2015	1.0	null
PC14	CCLE Cell Line Gene CNV Profiles	1.0	2.58489
Thyroid follicle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.667
GSE226285_3_v_1_nr0b1_human	RummaGEO Gene Perturbation Signatures	1.0	null
NEUROD1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.6455
nuclear outer membrane-endoplasmic reticulum membrane network	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.954961
CTCF_cardiac muscle cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-J7-8537-01A-11R-2404-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Triiodothyronine glucuronide	HMDB Metabolites of Enzymes	1.0	null
SW626	DepMap CRISPR Gene Dependency	1.0	2.06677
Pentose and glucuronate interconversions	KEGG Pathways 2026	1.0	null
envelope	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.087203
Leukopenia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.047
ZKSCAN1_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_GM10248_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
root nodule	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.696581
hsa-miR-3920	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
HBL-100	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2237
Blood group incompatibility	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.327
Lung adenocarcinoma_LUAD_TCGA-55-8614-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
jejunum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.0225
CTCF_GM12865_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PMC5895607-41388_2017_42_MOESM4_ESM.xls-geneNames-Extended_Data_3_Gene_list_of_SRC-1_targets_which_contain_STAT1_binding_motifs_from_LY2_cell_RNAseq_data_STAT1	Rummagene Transcription Factor Associations 2026	1.0	null
nutritional deficiency disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.170054
gastrointestinal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.999503
Blood platelet disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.43
CTCF_A549_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lung adenocarcinoma_LUAD_TCGA-62-8398-01A-11R-2326-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hepatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.652484
CTCF_keratinocyte_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Normocytic anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.483
Prostate adenocarcinoma_PRAD_TCGA-J4-A6G3-01A-11R-A311-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RAD21_HCT116_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
smooth endoplasmic reticulum	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.557629
MAX	ENCODE Transcription Factor Targets	1.0	null
NCI-H146	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2203
NR3C1_A549_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
glutamate-cysteine ligase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.185
POLR2AphosphoS2_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Urinary system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.291
embryonic kidney cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.862627
Thrombocytopenia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.449
Trichloroethanol glucuronide	HMDB Metabolites of Enzymes	1.0	null
spanning component of plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.283295
keratinocyte cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.127046
CTCF_fibroblast of skin of abdomen_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Defective GGT1 causes Glutathionuria (GLUTH)	Reactome Pathways 2014	1.0	null
Familial (Fpah)	DisGeNET Gene-Disease Associations	1.0	null
Apical plasma membrane urothelial plaque	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.704
CTCF_Caco-2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
bladder	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.07105
PMC8482137__F4	PFOCR Pathway Figure Associations 2024	1.0	null
KCI-MOH1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.912565
Hyperbilirubinemia	DisGeNET Gene-Disease Associations	1.0	null
Cognitive disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.662
Chemical carcinogenesis - DNA adducts	KEGG Pathways 2026	1.0	null
RFX5	ENCODE Transcription Factor Targets	1.0	null
plant culture	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.273346
CHAGO-K-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.0272
Flower bud	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.863
COLO 857	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.45024
colorectal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.986294
Total bilirubin levels	GWAS Catalog SNP-Phenotype Associations 2025	1.0	10.0
SNU16	DepMap CRISPR Gene Dependency	1.0	4.29569
CTCF_keratinocyte_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NB1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
thyroid gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.27023
P31FUJ	CCLE Cell Line Gene CNV Profiles	-1.0	-1.68979
Hepatomegaly	CTD Gene-Disease Associations	1.0	1.36247
FOXP2_SK-N-MC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.343042
Olfactory organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.601
Cysteine synthase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.651
EVSAT	DepMap CRISPR Gene Dependency	1.0	2.20688
NR3C1	ENCODE Transcription Factor Targets	1.0	null
Antler	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.508
GSE172016_2_v_1_paclitaxel_human	RummaGEO Drug Perturbation Signatures	1.0	null
muscle	GTEx Tissue Gene Expression Profiles	-1.0	-1.10204
CAS1	DepMap CRISPR Gene Dependency	1.0	4.45871
H3K27me3_astrocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Bilirubin Measurement	DisGeNET Gene-Phenotype Associations	1.0	null
membrane part	GO Cellular Component Annotations 2015	1.0	null
CACO-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.753
Kidney failure	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.765
cellular response to stimulus	GO Biological Process Annotations 2015	1.0	null
gall bladder	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.163618
ARID3A_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
uterus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.234302
B-cell lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.01
POLR2AphosphoS5_endothelial cell of umbilical vein_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cellular response to hormone stimulus	GO Biological Process Annotations 2015	1.0	null
CTCF_MCF-7_hg19_8	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_fibroblast of lung_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Thyroid gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.941
Monogenic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.612
496100418_TCx_no dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	7.65926
Metapathway biotransformation Phase I and II	WikiPathways Pathways 2024	1.0	null
KO52	COSMIC Cell Line Gene Mutation Profiles	1.0	null
large intestine cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.93497
liver	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.72727
colorectal adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.00327
CFPAC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09166
MYB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.42898
P3HR1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.67174
alitretinoin_rattus norvegicus_gpl85_liver   b_gds2385	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
embryonic structure	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.744214
hsa-miR-3662	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
SMAD2-18955504-HaCaT-human	ChEA Transcription Factor Binding Site Profiles	1.0	null
Sensory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.336
NZOV9	DepMap CRISPR Gene Dependency	1.0	3.46703
GTF2F1	ENCODE Transcription Factor Targets	1.0	null
Neonatal jaundice	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.747
JSC-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Human immunodeficiency virus infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.664
RD	CCLE Cell Line Gene CNV Profiles	1.0	2.10869
mRNA_NR5A2_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
cytoplasmic part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
Gall bladder	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.18
nuclear membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.129852
Bilirubin metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.187
YY1	MotifMap Predicted Transcription Factor Targets	1.0	null
Lip disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.05
CLOCK	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.1737
CTCF_H54_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H510A	COSMIC Cell Line Gene CNV Profiles	1.0	4.51153
17-beta-Estradiol-3-glucuronide	HMDB Metabolites of Enzymes	1.0	null
Duodenum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.49
HT-115	COSMIC Cell Line Gene Mutation Profiles	1.0	null
JUND_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Arbuscule	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.724
Casparian strip	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.813
hsa-miR-3973	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
Plant tumor tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.712
YY1	ENCODE Transcription Factor Targets	1.0	null
Apoplast	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.406
Fungal infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.254
GSE206729_4_v_1_trps1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A62O-01A-11R-A30C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
OVSAHO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.98005
KASUMI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.93571
sense organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.069912
membrane region	GO Cellular Component Annotations 2015	1.0	null
hindbrain	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.452584
crypt	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.482038
skin cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.05897
SMC3_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_HepG2_hg19_6	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lung adenocarcinoma_LUAD_TCGA-44-7660-01A-11R-2066-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
other source	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.737618
prostate gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.748753
Intestinal muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.546
RAD21_HCT116_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
3M complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.084
SP1_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
YY1_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.219398
CTCF_endothelial cell of umbilical vein_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
OS-RC-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Acquired metabolic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.804
nuclear aryl hydrocarbon receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.270434
Nicotine glucuronide	HMDB Metabolites of Enzymes	1.0	null
CTCF_fibroblast of lung_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Hypertension	CTD Gene-Disease Associations	1.0	1.07518
CTCF_HCT116_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
respiratory mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.377621
Annulus fibrosus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.512
Skin disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.858
H2AFZ_osteoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Cell type cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.888
LMO2	ChEA Transcription Factor Targets	1.0	null
root	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.767783
COV318	CCLE Cell Line Gene CNV Profiles	1.0	1.36621
PWR-1E	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Ribulose bisphosphate carboxylase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.883
organic substance biosynthetic process	GO Biological Process Annotations 2015	1.0	null
Inflammatory bowel disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.369
TOPIRAMATE	DGIdb Drug Targets 2026	1.0	0.113103
HS729	CCLE Cell Line Gene CNV Profiles	-1.0	-1.3819
Juice	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.654
acquired metabolic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.222822
PMC9794594-DataSheet_1.xlsx-ST12-Unnamed_6_KLF6	Rummagene Transcription Factor Associations 2026	1.0	null
16-alpha,17-beta-estriol 17-beta-D-glucuronide	HMDB Metabolites of Enzymes	1.0	null
Osteoporosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.16
Plant glandular hair	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.55
Guanylate cyclase complex, soluble	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.976
Peribacteroid membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.526
Metabolism of xenobiotics by cytochrome P450	KEGG Pathways 2026	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-HQ-A2OF-01A-11R-A26T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prenatal Exposure Delayed Effects	CTD Gene-Disease Associations	1.0	1.45458
CTCF_BE2C_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Defective MAT1A causes Methionine adenosyltransferase deficiency (MATD)	Reactome Pathways 2014	1.0	null
Stomach cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.088
metabolic process	GO Biological Process Annotations 2015	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B8-5551-01A-01R-1541-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BHLHA15	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.3704
Hak	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.609
colorectal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.935385
Hypertrophy	CTD Gene-Disease Associations	1.0	1.06116
Lymphatic system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.208
vacuole	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.254743
Bacteroid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.126
membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.0035
brain stem	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.417337
Gilbert syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.091
WRNIP1_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
plant	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.903275
Hypoglycemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.263
Congenital disorder of glycosylation type IIk	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.082
Polyketide synthase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.501
pharyngeal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.408212
Physical disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.444
Kidney Chromophobe_KICH_TCGA-KN-8423-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-56-7730-01A-11R-2125-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HL-7702 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.563
MKN-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.34634
496100421_PCx_probable Alzheimer's disease_TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.40625
Starch grain	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.653
lung fibroblast cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.21846
non-small cell lung cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.08035
Apical meristem	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.097
BHLHE40_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_LNCaP clone FGC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lung adenocarcinoma_LUAD_TCGA-50-6673-01A-11R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Arteriosclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.265
Uterine cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.177
C3A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.20734
Xeroderma Pigmentosum	DisGeNET Gene-Disease Associations	1.0	null
Disease of metabolism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.441
hsa-miR-4688	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
CTCF_brain microvascular endothelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
malaria	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.27687
CTV1DM	DepMap CRISPR Gene Dependency	1.0	4.76854
U343	Achilles Cell Line Gene Essentiality Profiles	-1.0	-1.46482
Upper respiratory tract disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.081
CTCF_SK-N-SH_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Meristem	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.304
Organ system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.125
Brush border	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.298
familial adenomatous polyposis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.19742
496100472_PCx_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.25669
GBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.8885
Bladder Urothelial Carcinoma_BLCA_TCGA-CF-A3MH-01A-11R-A20F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
parenchyma	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.21411
sickle cell anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.25207
fruit	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.801876
CHD1	ENCODE Transcription Factor Targets	1.0	null
Uridine 5'-diphosphate	HMDB Metabolites of Enzymes	1.0	null
DMS-273	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Liver disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.168
CTCF_ECC-1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
3-alpha,20-alpha-Dihydroxy-5-beta-pregnane 3-glucuronide	HMDB Metabolites of Enzymes	1.0	null
Nucleus pulposus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.881
mRNA_TUBA1A_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
CTCF_A549_hg19_7	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mRNA_ZSCAN4C_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
RAD21_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NFATC4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.8169
RAD21_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Bile	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.382
PMC8891017-41586_2022_4394_MOESM4_ESM.xlsx-ST6_-_MAF_enrichment-Unnamed_4_MAF	Rummagene Transcription Factor Associations 2026	1.0	null
LMX1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.5846
Mucositis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.518
monogenic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.214636
GSE226285_3_v_1_glutathione_human	RummaGEO Drug Perturbation Signatures	1.0	null
substance-related disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.509
Nascent polypeptide-associated complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.33
integument	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.02776
Gallbladder disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.27
Shoot tip	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.115
intracellular	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.26339
cell periphery	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.320077
RAD21_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SW 1417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.65035
Hydathode	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.949
hyperbilirubinemia	GWASdb SNP-Phenotype Associations	1.0	1.14684
CTCF_mammary epithelial cell_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HDAC1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
YY1_GM12892_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
6-Hydroxy-5-methoxyindole glucuronide	HMDB Metabolites of Enzymes	1.0	null
mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.966793
EMX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.4221
Lung squamous cell carcinoma_LUSC_TCGA-37-A5EN-01A-21R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SMAD2	ChEA Transcription Factor Targets	1.0	null
HOXA7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9765
SAP30	ENCODE Transcription Factor Targets	1.0	null
Cholestane-3,7,12,25-tetrol-3-glucuronide	HMDB Metabolites of Enzymes	1.0	null
3,17-Androstanediol glucuronide	HMDB Metabolites of Enzymes	1.0	null
Chemical carcinogenesis - receptor activation	KEGG Pathways 2026	1.0	null
Thylakoid	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.173
NCIH82	DepMap CRISPR Gene Dependency	1.0	2.0112
RBBP5_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_CD14-positive monocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ZNF680	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.9972
Liver	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.768
Leaf epidermis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.371
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
Root hair	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.222
ALLOPURINOL	DGIdb Drug Targets 2026	1.0	0.183792
integral component of plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.140554
cell type benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.257005
UMC-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32555
MHH-ES-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.71426
HCC202	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.15239
CTCF_GM12801_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Vascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.923
Efflux pump complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.686
intracellular organelle lumen	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.078831
cerebellum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.476589
Pollen	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.143
CTCF_WERI-Rb-1_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
multidrug-resistant tuberculosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.082
CTCF_MCF-7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7177-01A-11R-2016-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
4-(Methylnitrosamino)-1-(3-pyridyl)-1-butanol glucuronide	HMDB Metabolites of Enzymes	1.0	null
Malaria	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.122
TCCSUP	Achilles Cell Line Gene Essentiality Profiles	-1.0	-1.37707
Cotinine glucuronide	HMDB Metabolites of Enzymes	1.0	null
intestinal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.00196
Hepatoma HLE cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.982
Muscular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.245
CTCF_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC60	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.17568
Pancreas disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.431
Pigmentation disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.498
mitochondrial part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.050151
Lung squamous cell carcinoma_LUSC_TCGA-63-A5MS-01A-11R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HOS	CCLE Cell Line Gene CNV Profiles	1.0	1.60875
SNU-1040	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.34634
RAB29	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.51244
CTCF_GM12872_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Chang cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.854
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-A49B-01A-31R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HIR complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.699
H3K27me3_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
response to stimulus	GO Biological Process Annotations 2015	1.0	null
cellular response to endogenous stimulus	GO Biological Process Annotations 2015	1.0	null
ileocecum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.634762
SNU1214	CCLE Cell Line Gene CNV Profiles	-1.0	-1.6763
uronic acid metabolic process	GO Biological Process Annotations 2015	1.0	null
excretory gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.48317
melanocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.059104
Cholelithiasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.558
Priapism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.052
MYC_endothelial cell of umbilical vein_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Germ plasm	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.334
leukopenia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.732596
CTCF_MCF-7_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
molecular_function	GO Molecular Function Annotations 2015	1.0	null
STAT1_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Smooth endoplasmic reticulum	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.219
Hippocampus minor	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.737
CTCF_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K79me2_liver_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
Pollen tube	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.188
Lung adenocarcinoma_LUAD_TCGA-95-7043-01A-11R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
epithelial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.818576
intrinsic component of membrane	GO Cellular Component Annotations 2015	1.0	null
BSX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.1614
Kidney disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.841
Kernicterus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.806
spanning component of membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.283295
3-alpha-Androstanediol glucuronide	HMDB Metabolites of Enzymes	1.0	null
airway fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.198322
Xylem	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.663
CTCF_GM12872_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
prostate cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.494266
hsa-miR-607	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
Enterocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.707
Bladder Urothelial Carcinoma_BLCA_TCGA-CF-A3MI-01A-11R-A20F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Metabolic disorders of biological oxidation enzymes	Reactome Pathways 2014	1.0	null
PATU8988S	CCLE Cell Line Gene CNV Profiles	1.0	1.94745
Secretory trichome	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.87
CTCF_NB4_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Cholangitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.362
bilirubin	GAD Gene-Disease Associations	1.0	null
lncap cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.66071
Cell pole	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.793
DOXORUBICIN HYDROCHLORIDE	DGIdb Drug Targets 2026	1.0	0.0354297
PMC12178829-mmc4.xlsx-Sheet_4-MEG3-KD_Up-GeneName_AR	Rummagene Transcription Factor Associations 2026	1.0	null
alimentary canal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.62707
Secondary Malignant Neoplasm Of Colon And/Or Rectum	DisGeNET Gene-Disease Associations	1.0	null
Vacuolar proton-transporting V-type ATPase, V1 domain	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.991
CTCF_cardiac fibroblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
respiratory mucus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.432991
CTCF_pancreas_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
plumule	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.268137
ZNF263	ENCODE Transcription Factor Targets	1.0	null
glucuronate metabolic process	GO Biological Process Annotations 2015	1.0	null
Aerial part	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.968
hepatitis d	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.371477
RBPJ	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.5425
HEP_3B2_1-7	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Ost-alpha/Ost-beta complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.981
NR1D1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.7766
organ system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.08789
RAD21_ECC-1_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lysosomal storage disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.678
SMAD4-19686287-HaCaT-human	ChEA Transcription Factor Binding Site Profiles	1.0	null
496100466_PCx_probable Alzheimer's disease_no TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.08771
CTCF_fibroblast of lung_hg19_6	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_fibroblast of mammary gland_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
xenobiotic glucuronidation	GO Biological Process Annotations 2015	1.0	null
MDA-MB-453	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.944823
TK-6 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.73
Parenchymal cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.073
GSE200839,GSE233826_2_v_0_tnrc18_human	RummaGEO Gene Perturbation Signatures	-1.0	null
SK-MEL-30	COSMIC Cell Line Gene Mutation Profiles	1.0	null
LXF-289	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.34634
H3K4me1_G1E-ER4_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
Phenethylamine glucuronide	HMDB Metabolites of Enzymes	1.0	null
496100409_FWM_no dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.07917
MEIS3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.7032
Bladder Urothelial Carcinoma_BLCA_TCGA-CU-A0YR-01A-12R-A10U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Plant reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.927
GFER	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.47354
Female reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.477
Gluteal muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.563
Gastrointestinal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.379
GSE78199_2_v_1_tamoxifen_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Cell tip	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.826
CEBPB_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Digestive juice	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.301
DG-75	COSMIC Cell Line Gene Mutation Profiles	1.0	null
response to hormone	GO Biological Process Annotations 2015	1.0	null
CTCF_K562_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ileum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.619814
golgi apparatus	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.156513
CTCF_GM06990_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
A-375	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.98005
intracellular membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
CTCF_GM12871_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
throat	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.25681
11-Oxo-androsterone glucuronide	HMDB Metabolites of Enzymes	1.0	null
SAP30_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CAPAN1	DepMap CRISPR Gene Dependency	1.0	5.11005
Cuticle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.144
Hepa-1c1c7 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.77
Fer	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.901
Ovarian cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.155
BHLHE22	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.6905
MYC_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
calcium:proton antiporter complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.331
CTCF_GM12864_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
enterocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.220378
VAX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.005
trans-3-Hydroxycotinine glucuronide	HMDB Metabolites of Enzymes	1.0	null
NCIH1915	CCLE Cell Line Gene CNV Profiles	1.0	1.55408
CTCF_fibroblast of upper leg skin_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Hepatic artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.108
pioglitazone_rattus norvegicus_gpl341_liver_gds3850	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
JUND	ENCODE Transcription Factor Targets	1.0	null
Seizures	CTD Gene-Disease Associations	1.0	1.2475
CTCF_GM12865_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
496100416_FWM_dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.36041
Meconium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.076
U-2932	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.89662
Metapathway biotransformation(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
alitretinoin_rattus norvegicus_gpl85_gse3952	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
whole plant	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.791044
Eggshell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.738
Lung squamous cell carcinoma_LUSC_TCGA-98-A539-01A-31R-A262-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Crigler Najjar Syndrome	DisGeNET Gene-Disease Associations	1.0	null
HUPT4	DepMap CRISPR Gene Dependency	1.0	3.30507
SNG-M	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NUGC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.961767
LMO2-20887958-HPC-7-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
EZH2_endothelial cell of umbilical vein_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
COLO679	CCLE Cell Line Gene CNV Profiles	1.0	1.61716
Mycolate outer membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.511
GATA2-20887958-HPC-7-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
liver cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.472315
Kidney Chromophobe_KICH_TCGA-KN-8434-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-148b	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
HOXA5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.3955
Progressive familial intrahepatic cholestasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.104
metencephalon	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.472704
H3K4me1_G1E-ER4_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
response to endogenous stimulus	GO Biological Process Annotations 2015	1.0	null
NCI-H2073	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.70761
T-47D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04763
TBL1XR1_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Metabolic Syndrome X	DisGeNET Gene-Disease Associations	1.0	null
leukocyte disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.640251
OLIG1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.0271
JIMT1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.59455
CTCF_GM12871_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_spleen_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KYSE-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.847456
Bile canaliculus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.359
mRNA_SMAD1_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
CTCF_MCF-7_hg19_6	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_GM12874_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lung adenocarcinoma_LUAD_TCGA-55-8085-01A-11R-2241-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Collagen type V trimer	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.795
CACO-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16788
Petiole	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.792
Rough endoplasmic reticulum lumen	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.048
Organ system benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.058
SETDB1-19884257-MESC-mouse	ChEA Transcription Factor Binding Site Profiles	1.0	null
lung cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.067569
mRNA_MYCN_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
hsa-miR-4793-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
CTCF_WERI-Rb-1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hsa-miR-491-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
hypothyroidism	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.334315
hsa-miR-548j	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
Inflorescence stalk	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.81
Beta Thalassemia	DisGeNET Gene-Disease Associations	1.0	null
colon adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.374068
Lung adenocarcinoma_LUAD_TCGA-44-7670-01A-11R-2066-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
sec61 translocon complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.400139
RAD21_GM12878_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_kidney epithelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Colorectal carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.063
Hemoglobin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.964
PMC6810723__F4	PFOCR Pathway Figure Associations 2024	1.0	null
Sclerenchyma	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.835
Central nervous system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.034
EBF1	ENCODE Transcription Factor Targets	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2M6-06A-12R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
serotonin-activated cation-selective channel complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.949
H3K4me1_liver_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
Bone disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.48
Prostate disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.253
Drug metabolism - other enzymes	KEGG Pathways 2026	1.0	null
HCC1187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles	1.0	null
IGR-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
breast cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.233446
Ovarian disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.258
496100426_PCx_no dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.50086
plasma membrane part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.043115
female reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.85547
Ketoprofen glucuronide	HMDB Metabolites of Enzymes	1.0	null
Carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.879
Tyrosinemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.228
Bilirubin glucuronide	HMDB Metabolites of Enzymes	1.0	null
hsa-miR-371b-5p	TargetScan Predicted Conserved microRNA Targets	1.0	0.274552
Cellulose synthase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.596
HNF4G_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MAFG::NFE2L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.7363
all	GWASdb SNP-Phenotype Associations	1.0	0.029945
EN	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ChIP_POU5F1_18358816	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
CTCF_GM12873_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Photosystem	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.971
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
Female reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.345
BECKER	DepMap CRISPR Gene Dependency	1.0	4.74532
Hepatic vascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.257
HCC44	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.879074
Type 2 diabetes mellitus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.653
Ulcerative colitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.085
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-JW-AAVH-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Aspirin ADME	Reactome Pathways 2024	1.0	null
Dilated cardiomyopathy-hypergonadotropic hypogonadism syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.281
Endodermis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.518
SCH	DepMap CRISPR Gene Dependency	1.0	2.27405
Prepupa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.551
Serum Alkaline Phosphatase Raised	DisGeNET Gene-Phenotype Associations	1.0	null
LHX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.286
MM.1S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.85917
E2F4	ENCODE Transcription Factor Targets	1.0	null
Bacterial infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.574
CTCF_foreskin fibroblast_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
prostate cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.494136
NCI-H1373	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09166
feather vane	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.584022
Uridine diphosphate glucuronic acid	HMDB Metabolites of Enzymes	1.0	null
epidermal cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.063861
Lung squamous cell carcinoma_LUSC_TCGA-98-A53J-01A-11R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cos-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.81983
cytoplasmic part	LOCATE Predicted Protein Localization Annotations	1.0	null
PAX2	JASPAR Predicted Transcription Factor Targets	1.0	null
ornithine carbamoyltransferase deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.33651
Kidney Chromophobe_KICH_TCGA-KN-8429-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
limb	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.068684
lysosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.270068
All-trans-retinoic acid	HMDB Metabolites of Enzymes	1.0	null
TMK1	DepMap CRISPR Gene Dependency	1.0	8.36558
inherited metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.59921
BHLHE40	ENCODE Transcription Factor Targets	1.0	null
Disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.573
Synergid cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.743
Lung squamous cell carcinoma_LUSC_TCGA-77-6845-01A-11R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
endoplasmic reticulum	LOCATE Predicted Protein Localization Annotations	1.0	null
breast cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.2723
Amylin receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.919
hsa-miR-527	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
ESTRONE	DGIdb Drug Targets 2026	1.0	0.588133
KCNE5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.28613
OLIG3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.32195
Thyroid gland disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.461
LHX5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.0093
CTCF_GM12864_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Benzoyl glucuronide (Benzoic acid)	HMDB Metabolites of Enzymes	1.0	null
H3K4me1_osteoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
cell	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.26339
brain	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.627081
Epilepsy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.341
ZKSCAN1	ENCODE Transcription Factor Targets	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A45W-01A-11R-A24Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KM12	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NR0B1	ChEA Transcription Factor Targets	1.0	null
liver cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.6939
small intestine	GTEx Tissue Gene Expression Profiles	1.0	1.75549
proteasome accessory complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.326829
RORC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.7368
Myeloid leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.054
RAD21_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Ischemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.246
Lung squamous cell carcinoma_LUSC_TCGA-85-A5B5-01A-21R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Vein disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.049
hematopoietic system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.51611
Intestinal wall	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.037
Lung adenocarcinoma_LUAD_TCGA-J2-8194-01A-11R-2241-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2975-03A-01T-0734-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Morphine-3-glucuronide	HMDB Metabolites of Enzymes	1.0	null
hsa-miR-4656	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
TBX21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.4485
BHLHE40_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Muscle tissue disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.165
BCL6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.2037
Metabolic dysfunction-associated steatotic liver disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.577
Spironolactone	CTD Gene-Chemical Interactions	1.0	null
Propionic acidemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.046
Liver hepatocellular carcinoma_LIHC_TCGA-O8-A75V-01A-11R-A32O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Cerebrovascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.544
Calcitonin family receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.921
dna	GAD Gene-Disease Associations	1.0	null
MAFA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.6003
hsa-miR-548i	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
PC-14	COSMIC Cell Line Gene Mutation Profiles	1.0	null
RAD21_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Mesophyll	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.957
MHH-PREB-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Etiocholanolone	HMDB Metabolites of Enzymes	1.0	null
Biological oxidations	Reactome Pathways 2014	1.0	null
H3K27me3_Brain Substantia Nigra	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
H3K27me3_Chondrocytes from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
LYL1	ChEA Transcription Factor Targets	1.0	null
PMC6440742-elife-43627-supp4.xlsx-NFE2L2_ChIP-HeLa_ChIP2_NFE2L2	Rummagene Transcription Factor Associations 2026	1.0	null
rosiglitazone_homo sapiens_gpl96_gds2705	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Neurobehavioral Manifestations	CTD Gene-Disease Associations	1.0	1.23993
Disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.486
H3K36me3_erythroblast_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_MCF-7_hg19_7	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Developmental disorder of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.402
HDAC2	ENCODE Transcription Factor Targets	1.0	null
Height	DisGeNET Gene-Phenotype Associations	1.0	null
GSE228106_3_v_2_paclitaxel_human	RummaGEO Drug Perturbation Signatures	1.0	null
metabolism of xenobiotics by cytochrome p450	KEGG Pathways	1.0	null
A172	Achilles Cell Line Gene Essentiality Profiles	-1.0	-1.00099
Primary sclerosing cholangitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.026
Pith	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.953
CTCF_kidney_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
POU5F1	ChEA Transcription Factor Targets	1.0	null
Urinary tract infection	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.245
496100469_TCx_no dementia_TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.99952
6-Dehydrotestosterone glucuronide	HMDB Metabolites of Enzymes	1.0	null
Asthma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.314
JUND_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cos-7 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.464174
NR1I2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.1433
PL4	DepMap CRISPR Gene Dependency	1.0	7.92897
Steroid hormone biosynthesis	KEGG Pathways 2026	1.0	null
USF2_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Anemia	DisGeNET Gene-Disease Associations	1.0	null
CTCF_A549_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF	ENCODE Transcription Factor Targets	1.0	null
hsa-miR-548n	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
choline deficiency disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.691495
JURKAT	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Primary bacterial infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.453
Head and Neck squamous cell carcinoma_HNSC_TCGA-IQ-A61H-01A-11R-A30B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ACETAMINOPHEN GLUCURONIDE	DGIdb Drug Targets 2026	1.0	0.534667
hsa-miR-4496	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
Small intestine epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.724
(23S)-23,25-dihdroxy-24-oxovitamine D3 23-(beta-glucuronide)	HMDB Metabolites of Enzymes	1.0	null
gallbladder disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.315003
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
carboxylic acid metabolic process	GO Biological Process Annotations 2015	1.0	null
Egg yolk	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.836
CTCF_B cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Hairy root	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.755
small intestine cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.188675
HOXD8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.6269
Liver hepatocellular carcinoma_LIHC_TCGA-CC-A7IK-01A-12R-A33R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Glutamate synthase complex (NADPH)	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.554
Fascioliasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.205
mesenteric vein	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.190505
Liver hepatocellular carcinoma_LIHC_TCGA-G3-AAV4-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BHY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.98005
leaf	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.270561
H2AFZ_mammary epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.428891
GATA2	ChEA Transcription Factor Targets	1.0	null
CTCF_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
response to organic substance	GO Biological Process Annotations 2015	1.0	null
inferior mesenteric vein	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.397979
large intestine	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.23985
Androsterone glucuronide	HMDB Metabolites of Enzymes	1.0	null
PDX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.9257
ChIP_NR0B1_18358816	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
Reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.524
RAX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7871
TESTOSTERONE	DGIdb Drug Targets 2026	1.0	0.301607
flavonoid glucuronidation	GO Biological Process Annotations 2015	1.0	null
TBX5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.4596
Prostate Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
pharyngeal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.102144
PHYHD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.42689
pronephros	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.751231
ascospore-type prospore	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.282189
496100459_PCx_no dementia_no TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.35003
CTCF_GM12865_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hsa-miR-451b	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
Estriol	HMDB Metabolites of Enzymes	1.0	null
intracellular part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.060064
MDCK-MDR1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.652
D-Glucuronic acid	HMDB Metabolites of Enzymes	1.0	null
Hemolytic anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.621
colorectal cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.987162
CTCF_A549_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SPI1	ENCODE Transcription Factor Targets	1.0	null
Thyroid epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.206
Blood protein disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.187
colon	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.25771
plant-type cell wall	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.072
lung fibroblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.182745
NR0B1-18358816-MESC-mouse	ChEA Transcription Factor Binding Site Profiles	1.0	null
RFX5_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Plantlet	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.908
Primary hematopoietic stem cells G-CSF-mobilized Female RO_01508	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	-1.0	-1.95321
hsa-miR-4477a	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
COLO684	DepMap CRISPR Gene Dependency	1.0	5.42437
hsa-miR-548m	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
nuclear outer membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.176587
NCIH2073	CCLE Cell Line Gene CNV Profiles	-1.0	-1.83622
Neutropenia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.153
CTCF_GM12873_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hepatocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.84607
BCL6B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.5195
sf-21 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.193227
cytoplasmic part	GO Cellular Component Annotations 2015	1.0	null
CTCF_fibroblast of upper leg skin_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Endometriosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.065
NCI-H1573	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Primary T cells from cord blood	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	-1.0	-0.926426
Lung carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.24
GSE195568_2_v_0_palbociclib_human	RummaGEO Drug Perturbation Signatures	1.0	null
Pregnanediol-3-glucuronide	HMDB Metabolites of Enzymes	1.0	null
5-Hydroxy-6-methoxyindole glucuronide	HMDB Metabolites of Enzymes	1.0	null
Nasopharyngitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.034
Sickle cell disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.284
Root cortex	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.008
Pitcher	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.69
G-402	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02683
testis	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.507457
MFE280	DepMap CRISPR Gene Dependency	1.0	7.12035
Prolonged Neonatal Jaundice	DisGeNET Gene-Phenotype Associations	1.0	null
Adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.383
Leukopenia	DisGeNET Gene-Disease Associations	1.0	null
CTCF_GM12878_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hsa-miR-136	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
Lung adenocarcinoma_LUAD_TCGA-44-A4SS-01A-11R-A24X-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TBX15	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.0741
HCC1395	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.961767
Arthritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.199
RAD21_MCF-7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
glutamyl-trna(gln) amidotransferase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.816699
CTCF_GM12866_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TBX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.6696
Thyroid Neoplasms	HuGE Navigator Gene-Phenotype Associations	1.0	null
CTCF_endothelial cell of umbilical vein_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.343
Autosomal dominant disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.124
Etiocholanolone glucuronide	HMDB Metabolites of Enzymes	1.0	null
RAX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.5417
culture medium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.494918
MAZ_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_fibroblast of dermis_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Protein kinase 5 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.742
RAD21_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
urogenital system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.45564
Defective TPMT causes Thiopurine S-methyltransferase deficiency (TPMT deficiency)	Reactome Pathways 2014	1.0	null
kidney	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.51522
Diarrhea	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.246
cytosol	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.21273
hsa-miR-548c-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
nuclear envelope	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.213669
MDA-MB-231	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.98005
MYC_NB4_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RFX5_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SN-38	HMDB Metabolites of Enzymes	1.0	null
peritoneum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.153702
Bladder Urothelial Carcinoma_BLCA_TCGA-CF-A27C-01A-11R-A16R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Extraorganismal space	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.175
Hyperthyroidism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.018
HCC38	CCLE Cell Line Gene CNV Profiles	1.0	1.36993
gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.38294
NR4A2	ChEA Transcription Factor Targets	1.0	null
UACC893	DepMap CRISPR Gene Dependency	1.0	3.43416
Neonate	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.047
NEUROG2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.202
Adult liver stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.965
monosaccharide metabolic process	GO Biological Process Annotations 2015	1.0	null
TBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.831
Ornithine carbamoyltransferase deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.074
nasal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.409731
RERF-LC-KJ	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04763
Kidney renal papillary cell carcinoma_KIRP_TCGA-J7-A8I2-01A-12R-A36F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
skin	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.218186
Radicle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.854
Cholecystolithiasis	DisGeNET Gene-Disease Associations	1.0	null
RAD21_MCF-7_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KMM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18168
GSE206729_3_v_1_trps1_human	RummaGEO Gene Perturbation Signatures	1.0	null
Depressive disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.532
Low Density Lipoprotein Cholesterol Measurement	DisGeNET Gene-Phenotype Associations	1.0	null
TCF7L2	ChEA Transcription Factor Targets	1.0	null
single-organism process	GO Biological Process Annotations 2015	1.0	null
Rectum adenocarcinoma_READ_TCGA-G5-6572-02A-12R-1830-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
integral component of membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.229176
Bladder Urothelial Carcinoma_BLCA_TCGA-BL-A3JM-01A-12R-A21D-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
intrinsic component of membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.105098
cardiovascular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.237513
Pollen tube tip	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.134
Lung adenocarcinoma_LUAD_TCGA-55-8505-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Metabolism	dbGAP Gene-Trait Associations	1.0	2.08785
cytoplasm	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
wing	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.174399
Cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.147
tyrosinemia type i	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.36187
CTCF_BJ_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_fibroblast of lung_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-HC-8261-01A-11R-2263-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
internal female genital organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.655024
CTCF_lung_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
membrane	GO Cellular Component Annotations 2015	1.0	null
NCIH1355	DepMap CRISPR Gene Dependency	1.0	4.69433
ethanol_rattus norvegicus_gpl341_gds2107	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
CTCF_fibroblast of pulmonary artery_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FOSL2_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Bile ductule	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.853
NCI-H1395	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.864786
plant reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.801042
Central nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.955
Liver Neoplasms	CTD Gene-Disease Associations	1.0	1.46067
hsa-miR-548y	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
Palmitoyl glucuronide	HMDB Metabolites of Enzymes	1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-3A-A9I7-01A-21R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
intracellular organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.03129
H3K4me2_keratinocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Schizophrenia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.139
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
Defective UGT1A4 causes hyperbilirubinemia	Reactome Pathways 2014	1.0	null
HB1119	DepMap CRISPR Gene Dependency	1.0	3.5932
2-Methoxy-estradiol-17b 3-glucuronide	HMDB Metabolites of Enzymes	1.0	null
stem	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.267102
NCIH1618	CCLE Cell Line Gene CNV Profiles	-1.0	-2.04677
CTCF_A549_hg19_6	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MFE296	DepMap CRISPR Gene Dependency	1.0	5.57595
Berry	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.491
RAD21_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.055684
spleen	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.268828
H3K4me1_megakaryocyte_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
viral infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.047396
SIHA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0821
CTCF_bronchial epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Respiratory system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.559
RAD21	ENCODE Transcription Factor Targets	1.0	null
KARPAS-620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.28701
EFM-192A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.46547
hep-g2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.96809
Lower respiratory tract disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.83
SETDB1	ChEA Transcription Factor Targets	1.0	null
YY1_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
COV413A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.6562
nci-h358 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.252919
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2GS-06A-12R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Thalassemia Intermedia	DisGeNET Gene-Disease Associations	1.0	null
Infertility	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.061
V-79 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.671
ZNF317	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.2525
Porphyrin metabolism	KEGG Pathways 2026	1.0	null
Lithocholate 3-O-glucuronide	HMDB Metabolites of Enzymes	1.0	null
CTCF_K562_hg19_6	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Autosomal recessive disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.533
hsa-miR-4261	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
Thioglucosidase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.851
Pericarp	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.088
outer membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.096604
aryl hydrocarbon receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.341907
urea cycle disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.218034
H3K4me2_HeLa-S3_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
thorax	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.590839
MDCK-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.829
Lung squamous cell carcinoma_LUSC_TCGA-22-4591-01A-01R-1201-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE125862_2_v_0_dexamethasone_human	RummaGEO Drug Perturbation Signatures	1.0	null
metabolism	GAD Gene-Disease Associations	1.0	null
Glucuronidation	Reactome Pathways 2024	1.0	null
CTCF_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RAD21_H1-hESC_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KDM5A	ENCODE Transcription Factor Targets	1.0	null
endoplasmic reticulum part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.816699
gastrointestinal system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.06018
cv-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.492084
Xylem parenchyma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.306
Biliary tract disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.886
CTCF_K562_hg19_7	ENCODE Transcription Factor Binding Site Profiles	1.0	null
fetus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.692493
Terminal bronchiole	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.811
cell part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
fatty acid beta-oxidation multienzyme complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.232029
H2AFZ_endothelial cell of umbilical vein_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
wm-115 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.270561
PMC7592539-12885_2020_7456_MOESM4_ESM.xlsx-Sup_TableS3_LMS_del_genes_conf-2q37_1_TP63	Rummagene Transcription Factor Associations 2026	1.0	null
LN340	CCLE Cell Line Gene CNV Profiles	1.0	1.66382
H3K4me3_liver_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
intracellular part	GO Cellular Component Annotations 2015	1.0	null
lymphoblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.061877
autosomal recessive disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.211597
biosynthetic process	GO Biological Process Annotations 2015	1.0	null
pharyngeal cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.106893
PMC11474056-pnas.2404841121.sd01.xlsx-Supplemental_Table_8_Fig1G-H-Supplemental_Table_8_Transcriptomic_overlap_between_LPS_and_Sepsis_and_or_Tuberculosis_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
Valproic acid glucuronide	HMDB Metabolites of Enzymes	1.0	null
organism form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.139
Cambium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.988
Gastric ulcer	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.576
TBX18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.8963
nose	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.469599
Arteriosclerotic cardiovascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.263
breast cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.467306
EZH2_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KYAE1	DepMap CRISPR Gene Dependency	1.0	6.51474
Leukocyte disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.93
NR2F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.7214
Brain capillary endothelial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.608
Neuro D	MotifMap Predicted Transcription Factor Targets	1.0	null
CTCF_HCT116_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Metabolism	Reactome Pathways 2024	1.0	null
Agranulocytosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.156
Liver cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.414
vascular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054576
intestinal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.950352
HCC2935	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.903618
Pneumonia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.085
Clara cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.705
Phloem	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.489
CTCF_K562_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PMC10123531-NIHMS1874945-supplement-Table_S6.xlsx-SOX2_BCAT_cobound_peaks-Gene_Name_SOX2	Rummagene Transcription Factor Associations 2026	1.0	null
CAKI-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.58911
Integumentary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.911
CTCF_cardiac muscle cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Neuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.47
SNU-175	COSMIC Cell Line Gene Mutation Profiles	1.0	null
hsa-miR-152	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
Lung squamous cell carcinoma_LUSC_TCGA-O2-A52S-01A-11R-A262-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
C32	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.937
H3K4me1_erythroblast_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
Estrone glucuronide	HMDB Metabolites of Enzymes	1.0	null
Prostate cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.246
Communication disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.321
hsa-miR-548a-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
H3K27ac_keratinocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Tetrahydroaldosterone-3-glucuronide	HMDB Metabolites of Enzymes	1.0	null
RCOR1_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Amniotic fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.165
disease of metabolism	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.25994
4-Hydroxyandrostenedione glucuronide	HMDB Metabolites of Enzymes	1.0	null
Amylin receptor complex 1	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.838
mRNA_T_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
hsa-miR-4778-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
Lymphatic system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.259
breast adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.093437
CTCF_H1-hESC_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Parasitic infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.238
Bilirubin	dbGAP Gene-Trait Associations	1.0	3.45348
RCOR1_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_foreskin fibroblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-58-A46M-01A-11R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Male reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.416
CTCF_GM12867_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CUX1	ENCODE Transcription Factor Targets	1.0	null
shoot	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.233162
ME-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.847456
Symbiosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.033
transferase activity, transferring glycosyl groups	GO Molecular Function Annotations 2015	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-EJ-5505-01A-01R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
autosomal genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.226607
KETAMINE HYDROCHLORIDE	DGIdb Drug Targets 2026	1.0	0.392089
Thoracic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.571
primary metabolic process	GO Biological Process Annotations 2015	1.0	null
Hepatitis D	DisGeNET Gene-Disease Associations	1.0	null
Cell wall	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.926
Unconjugated Hyperbilirubinemia	DisGeNET Gene-Disease Associations	1.0	null
CTCF_GM10266_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
USF2	ENCODE Transcription Factor Targets	1.0	null
SK-MEL-28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.902024
CTCF_keratinocyte_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
intestine	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.61012
Biological oxidations	Reactome Pathways 2024	1.0	null
Diabetes Mellitus, Type 2	HuGE Navigator Gene-Phenotype Associations	1.0	null
Lung adenocarcinoma_LUAD_TCGA-75-6211-01A-11R-1755-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KASUMI1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.45556
storage tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.416957
Atherosclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.263
NOTO	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.4667
neonate	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.592043
G292CLONEA141B1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.50771
CTCF_GM12870_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Liver Neoplasms, Experimental	CTD Gene-Disease Associations	1.0	1.381
KYSE-70	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.912565
Colonic adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.684
cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.29658
NCI-H250	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HTK	CCLE Cell Line Gene CNV Profiles	1.0	1.74641
cellular response to organic substance	GO Biological Process Annotations 2015	1.0	null
colorectum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.21134
CTCF_GM12873_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ZNF143	ENCODE Transcription Factor Targets	1.0	null
2-Methoxyestrone	HMDB Metabolites of Enzymes	1.0	null
H3K27me3_G1E-ER4_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MAF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.9465
RAD21_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_astrocyte of the cerebellum_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Plant parenchyma	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.505
PMC8640960__F3	PFOCR Pathway Figure Associations 2024	1.0	null
Extracellular ferritin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.817
CTCF_epithelial cell of proximal tubule_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
placenta	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.342602
small intestine epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.180617
CTCF_LNCaP clone FGC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Glucose Measurement	DisGeNET Gene-Phenotype Associations	1.0	null
microbody	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.67463
SNUC1	DepMap CRISPR Gene Dependency	1.0	2.08729
MAFF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.0205
ZNF143_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Endocrine gland cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.766
Drug ADME	Reactome Pathways 2024	1.0	null
POLR2A_endothelial cell of umbilical vein_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ZNF384_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Thoracic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.578
epidermis	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.236921
intracellular organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
Sarcoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.01
Fiddlehead	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.746
Intrahepatic cholestasis of pregnancy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.04
carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.07
GSE160817_7_v_6_slamf6_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE200839,GSE233826_2_v_6_tnrc18_human	RummaGEO Gene Perturbation Signatures	-1.0	null
SPI1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.988224
GR	MotifMap Predicted Transcription Factor Targets	1.0	null
leukocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052311
EN2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.6349
reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.994554
CTCF_fibroblast of dermis_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
blood vessel	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.055538
POU5F1-18358816-MESC-mouse	ChEA Transcription Factor Binding Site Profiles	1.0	null
POLR2A_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EFO21	CCLE Cell Line Gene CNV Profiles	-1.0	-2.11212
Cortolone-3-glucuronide	HMDB Metabolites of Enzymes	1.0	null
Vascular endothelial glycocalyx	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.544
MAX::MYC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.619
udp-glycosyltransferase activity	GO Molecular Function Annotations 2015	1.0	null
Golgi lumen	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.898
Parasitic protozoa infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.162
CTCF_fibroblast of villous mesenchyme_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Bile duct	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.771
Gravid adult	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.902
Ovarian theca-interstitial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.6
Neoplasms	CTD Gene-Disease Associations	1.0	1.05423
liver cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.248683
thyroid gland disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.244345
RBBP5	ENCODE Transcription Factor Targets	1.0	null
PHENOBARBITAL	DGIdb Drug Targets 2026	1.0	0.158955
CTCF_fibroblast of skin of abdomen_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
membrane part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
NCI-H1048	COSMIC Cell Line Gene Mutation Profiles	1.0	null
internal male genital organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.784388
NCI-H1651	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2203
2,2,2-Trichloroethanol	HMDB Metabolites of Enzymes	1.0	null
Olfactory gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.643
SIX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.8485
mRNA_AES_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
central nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.615377
Lung squamous cell carcinoma_LUSC_TCGA-18-4721-01A-01R-1443-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cellular_component	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.35649
HCFC1	ENCODE Transcription Factor Targets	1.0	null
Internode	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.929
CTCF_astrocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
QGP-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00429
Breast disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.579
Elevated Blood Glucose Level	DisGeNET Gene-Phenotype Associations	1.0	null
NOP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.43024
Tubulobulbar complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.675
DNA	dbGAP Gene-Trait Associations	1.0	1.50783
organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.373899
CTCF_GM20000_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Biliary epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.189
Serum metabolite concentrations in chronic kidney disease	GWAS Catalog SNP-Phenotype Associations 2025	1.0	1.63979
olfactory epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.486326
496100419_TCx_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	6.55771
CTCF_GM12867_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
embryonic cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.549312
Neutropenia	DisGeNET Gene-Disease Associations	1.0	null
specific developmental disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.158097
Inherited metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.442
Mesophyll cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.903
MSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.0897
Codeine	HMDB Metabolites of Enzymes	1.0	null
SPN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.26462
FLI1::DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.2675
MAZ_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
furan	CTD Gene-Chemical Interactions	1.0	null
bounding membrane of organelle	GO Cellular Component Annotations 2015	1.0	null
Gut wall	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.075
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7424-01A-11R-2081-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ATORVASTATIN	DGIdb Drug Targets 2026	1.0	0.17298
CAL78	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39617
Edema	CTD Gene-Disease Associations	1.0	1.51734
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4985-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
CEBPB	ENCODE Transcription Factor Targets	1.0	null
integral component of membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
FOXP2	ENCODE Transcription Factor Targets	1.0	null
respiratory system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.19667
neonatal jaundice	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.886389
Blood Protein Measurement	DisGeNET Gene-Phenotype Associations	1.0	null
organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6962-01A-11R-1915-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DLX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7902
REST_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Mucilage	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.551
lytic vacuole	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.270068
endoplasmic reticulum	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.10358
Octanoylglucuronide	HMDB Metabolites of Enzymes	1.0	null
H3K4me3_G1E_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
nucleus	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.738263
H3K27me3_Colonic Mucosa	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Serum Total Cholesterol Measurement	DisGeNET Gene-Phenotype Associations	1.0	null
intracellular membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.08679
Aryl hydrocarbon receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.601
stratum spinosum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.108955
ARH77	DepMap CRISPR Gene Dependency	1.0	9.74706
HS 695T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.58692
Seizures	DisGeNET Gene-Phenotype Associations	1.0	null
Proteinuria	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.089
Cauline leaf	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.569
Kidney renal papillary cell carcinoma_KIRP_TCGA-2Z-A9J2-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-CH-5788-01A-11R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CTCF_endothelial cell of umbilical vein_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-DS-A1OD-01A-11R-A14Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CTCF_GM12872_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Malignant Neoplasm	DisGeNET Gene-Disease Associations	1.0	null
GSE206729_5_v_1_trps1_human	RummaGEO Gene Perturbation Signatures	1.0	null
BRCA1_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
amoxicillin_rattus norvegicus_gpl341_gse2354	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
H3K4me1_lung_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
Hepatitis A	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.01
Small intestine	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.039
RAD21_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Amylin receptor complex 2	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.039
hsa-miR-5096	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
H3K4me1_G1E_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
parasitic infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.358551
H3K4me1_megakaryocyte_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
EZH2_mammary epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Testosterone	HMDB Metabolites of Enzymes	1.0	null
ls-180 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.587228
porphyrin and chlorophyll metabolism	KEGG Pathways	1.0	null
Intestinal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.461
H3K4me1_ES-E14_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me1_erythroblast_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
MAFA	MotifMap Predicted Transcription Factor Targets	1.0	null
Retinyl beta-glucuronide	HMDB Metabolites of Enzymes	1.0	null
NCIH23	Achilles Cell Line Gene Essentiality Profiles	1.0	1.05841
RKN	Achilles Cell Line Gene Essentiality Profiles	1.0	1.46013
Stomach Smooth Muscle	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	1.0	1.15876
Sickle cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.071
Serum Albumin Measurement	DisGeNET Gene-Phenotype Associations	1.0	null
MITOXANTRONE HYDROCHLORIDE	DGIdb Drug Targets 2026	1.0	0.84019
HEC-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
integumentary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.054756
Microcytic anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.213
pericholangitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.620226
TBX20	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.8675
CTCF_GM06990_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Memory Disorders	CTD Gene-Disease Associations	1.0	1.27875
urinary tract	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.50575
Hyperbilirubinemia, Neonatal	DisGeNET Gene-Disease Associations	1.0	null
RAD21_A549_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
monocarboxylic acid metabolic process	GO Biological Process Annotations 2015	1.0	null
FEBUXOSTAT	DGIdb Drug Targets 2026	1.0	0.490111
b-lymphoblastoid cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.269174
Cholesterol glucuronide	HMDB Metabolites of Enzymes	1.0	null
colonic cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.98282
DMS 53	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.913635
CTCF_GM12869_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Amelogenesis imperfecta type 1B	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.361
CTCF_HeLa-S3_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lung adenocarcinoma_LUAD_TCGA-05-4389-01A-01R-1206-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Colitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.263
Lateral root	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.144
CTCF_fibroblast of pedal digit skin_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MAFK	ENCODE Transcription Factor Targets	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EA-A410-01A-11R-A32Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cytosolic aryl hydrocarbon receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.248578
CTCF_GM19239_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.07308
male reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.814815
LN-18	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Primary cell wall	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.746
ZNF184	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.4404
H3K23me2_H9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Seed coat	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.869
bronchogenic carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.071968
ESX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.5237
Gilbert Disease (Disorder)	DisGeNET Gene-Disease Associations	1.0	null
biological_process	GO Biological Process Annotations 2015	1.0	null
endoplasmic reticulum membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.930774
Musculoskeletal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.697
CTCF_brain microvascular endothelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_fibroblast of pedal digit skin_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H2804	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.988224
hsa-miR-3158-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
Overnutrition	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.669
intracellular immature spore	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.140528
EZH2_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
thyroid epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.932766
Metabolism	Reactome Pathways 2014	1.0	null
Pancreatic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.286
Defective SLC35D1 causes Schneckenbecken dysplasia (SCHBCKD)	Reactome Pathways 2014	1.0	null
SNU-620 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.78
plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.298455
Necrosis	CTD Gene-Disease Associations	1.0	1.86655
CTCF_astrocyte of the cerebellum_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Myopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.162
REL	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.8235
intrinsic component of plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.129041
CTCF_MCF-7_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
fibroblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.591641
Stoma	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.991
MAX_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.203933
RCOR1	ENCODE Transcription Factor Targets	1.0	null
carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.527676
tyrosinemia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.138029
CTCF_medulloblastoma_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Sclera	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.072
HNF1A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.8967
NCI-H630	COSMIC Cell Line Gene Mutation Profiles	1.0	null
2-Methoxyestradiol	HMDB Metabolites of Enzymes	1.0	null
mRNA_CDX2_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-G3-AAV3-01A-11R-A37K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5885-01A-11R-1592-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Hypothyroidism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.479
MAX_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GLC82	CCLE Cell Line Gene CNV Profiles	-1.0	-2.35126
ZNF143_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Guard cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.916
PBX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.937
Bipolar I disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.095
CTCF_BE2C_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
UACC-812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.913635
lung cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.911373
Liver disease biomarker	GWAS Catalog SNP-Phenotype Associations 2025	1.0	1.8
Median body	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.543
gill	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.436438
rectal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.985859
PMC8766486-42003_2021_2990_MOESM3_ESM.xlsx-ST18-Supplementary_Data_18_Gene_burden_for_deletions_by_subtype_ST18	Rummagene Transcription Factor Associations 2026	1.0	null
HDAC2_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Disease by infectious agent	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.991
Vascular bundle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.637
melanoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.061071
adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.828197
breast cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.073809
TTLL6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86828
hematopoietic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051447
HCC1599	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CTCF_keratinocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PANC 02.03	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.887929
primary culture	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.563238
Feather vane	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.966
MNX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.4988
esophagus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.329361
parasitic protozoa infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.170789
Rectal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.671
colon carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.491978
disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.966663
Substance abuse	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.358
CTCF_GM12891_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-FJ-A3Z9-01A-11R-A26T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
methylprednisolone_rattus norvegicus_gpl341_gds972	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.0285
Prostate adenocarcinoma_PRAD_TCGA-CH-5772-01A-11R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Urea cycle disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.108
Primary biliary cholangitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.139
MOLT-4	COSMIC Cell Line Gene Mutation Profiles	1.0	null
REST_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_Mobilized CD34 Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
hsa-miR-326	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
Stevens-Johnson syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.122
2-Methoxyestrone 3-glucuronide	HMDB Metabolites of Enzymes	1.0	null
Petal	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.006
vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.502288
peroxisome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.677238
agranulocytosis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.737054
Endocrine system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.772
pigmentation disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.633169
H4K20me1_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Inflammation	CTD Gene-Disease Associations	1.0	1.08231
Hair root	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.6
LBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.5704
CUX1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ZNF143_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mRNA_STAT3_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
retromer, cargo-selective complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.507
CTCF_SK-N-SH_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_epithelial cell of esophagus_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HS 69ST	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.43279
OKAJIMA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.15127
H3K27me3_Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Immune system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.208
Hepatitis B	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.434
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-FU-A3HZ-01A-11R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
urinary system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.50906
Midgut	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.145
Heart disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.58
25-Hydroxyvitamin D2 25-(beta-glucuronide)	HMDB Metabolites of Enzymes	1.0	null
Opportunistic mycosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.227
P-388 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.641
Root quiescent center	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.505
Plant primordium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.915
CTCF_GM12869_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-NC-A5HL-01A-11R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SHP-77	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CTCF_A549_hg19_9	ENCODE Transcription Factor Binding Site Profiles	1.0	null
G111	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.36712
hypophysis	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.436822
Thrombosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.131
Acquired immunodeficiency syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.543
Nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.04
membrane part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.4672
adenocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.881204
Lipid storage disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.639
breast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.621831
Pain agnosia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.379
Mood disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.586
EP300_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Estrone	HMDB Metabolites of Enzymes	1.0	null
BICR 78	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.953204
adenoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.136478
Hepatocellular carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.576
Hep-G2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.687
seedling	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.323509
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7424-11A-01R-2081-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K36me3_CH12.LX_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HOXB3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.4631
SW684	COSMIC Cell Line Gene Mutation Profiles	1.0	null
neutropenia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.709169
CHAGOK1	CCLE Cell Line Gene CNV Profiles	1.0	1.3797
CTCF_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
respiratory epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.11525
Kidney Diseases	CTD Gene-Disease Associations	1.0	1.29348
MAZ_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SN38 glucuronide	HMDB Metabolites of Enzymes	1.0	null
Defective GCLC causes Hemolytic anemia due to gamma-glutamylcysteine synthetase deficiency (HAGGSD)	Reactome Pathways 2014	1.0	null
hsa-miR-298	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
Steatotic liver disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.646
CTCF_osteoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
17-Hydroxyandrostane-3-glucuronide	HMDB Metabolites of Enzymes	1.0	null
Total bilirubin levels in HIV-1 infection	GWAS Catalog SNP-Phenotype Associations 2025	1.0	3.01549
Lung squamous cell carcinoma_LUSC_TCGA-43-2578-01A-01R-0851-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-3194-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
cholangitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.119569
Phase II - Conjugation of compounds	Reactome Pathways 2024	1.0	null
Colorectal cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.672
Leaf disc	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.025
BT-20	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.860412
small intestine	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.36814
CTCF_skin fibroblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BCL3	ENCODE Transcription Factor Targets	1.0	null
Drug-Induced Liver Injury	CTD Gene-Disease Associations	1.0	1.90208
multiple chemical sensitivity	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.415773
Exocarp	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.936
H3K4me1_G1E_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
Apical bud	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.646
DOK	DepMap CRISPR Gene Dependency	1.0	5.00051
CTCF_epithelial cell of proximal tubule_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-2Y-A9GS-01A-12R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TCF7L2-21901280-H4IIE-RAT	ChEA Transcription Factor Binding Site Profiles	1.0	null
rosiglitazone_rattus norvegicus_gpl341_liver_gds3850	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EK-A2IR-01A-11R-A180-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
juvenile	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.430312
Spondyloepimetaphyseal dysplasia with joint laxity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.067
NCI-H1568	COSMIC Cell Line Gene Mutation Profiles	1.0	null
integral component of membrane	GO Cellular Component Annotations 2015	1.0	null
Omasum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.583
Glucosephosphate dehydrogenase deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.374
Autoimmune disease of gastrointestinal tract	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.397
Pancreatic adenocarcinoma_PAAD_TCGA-HZ-8637-01A-11R-2404-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SW948	CCLE Cell Line Gene CNV Profiles	1.0	1.40273
PR-Mel cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.819
Cellulose microfibril	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.373
Bone inflammation disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.212
KDM5A_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Connective tissue disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.614
NCI-H187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.70143
VMRCRCW	CCLE Cell Line Gene CNV Profiles	1.0	1.64402
H3K27me3_Pancreatic Islets	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
gilbert syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	2.17232
CTCF_MCF-7_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hsa-miR-4509	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
COLO 853	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32555
Cholelithiasis	DisGeNET Gene-Disease Associations	1.0	null
single-organism metabolic process	GO Biological Process Annotations 2015	1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2862-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.806
MAFK_ES-E14_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
nci-h322 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.36825
organelle membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.560943
organic substance metabolic process	GO Biological Process Annotations 2015	1.0	null
G-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.34634
CTCF_foreskin fibroblast_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EBF1_GM12878_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cholestasis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.888438
GSE143782_6_v_8_calcitriol_human	RummaGEO Drug Perturbation Signatures	1.0	null
RAD21_SK-N-SH_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC1954	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22746
UACC257	DepMap CRISPR Gene Dependency	1.0	4.65563
PMC8528285-pbio.3001085.s010.xlsx-Fig_7E-MLX_TESTES_MLX	Rummagene Transcription Factor Associations 2026	1.0	null
Vomiting	CTD Gene-Disease Associations	1.0	1.03901
Glucose metabolism disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.932
LMX1A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.192
Bile secretion	KEGG Pathways 2026	1.0	null
female reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.932337
response to chemical	GO Biological Process Annotations 2015	1.0	null
brain disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.346777
H3K27me3_Neurosphere Cultured Cells Ganglionic Eminence Derived	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
3-isopropylmalate dehydratase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.025
NCI-H1944	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Zona fasciculata	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.518
GSE195568_1_v_0_palbociclib_human	RummaGEO Drug Perturbation Signatures	1.0	null
RCOR1_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Testosterone glucuronide	HMDB Metabolites of Enzymes	1.0	null
Mucormycosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.439
Exine	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.776
Diabetes mellitus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.905
adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.252422
Np	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.903
forestomach	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.371619
Coleoptile	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.671
plant organ culture	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.187182
vein	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.092337
mRNA_ASCL1_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null