GTEx Tissue Gene Expression Profiles 2023 Dataset

Description gene expression profiles for tissues from GEx by RNA-seq
Measurement gene expression by RNA-seq
Association gene-tissue associations by differential expression of gene acoss tissues
Category transcriptomics
Resource Genotype Tissue Expression
Citation(s)
Last Updated 2023 Nov 01
Stats
  1. 17369 genes
  2. 54 tissues
  3. 108000 gene-tissue associations

Data Access

API
Script

Visualizations

  • Gene Attribute

  • Gene Similarity

  • Attribute Similarity

  • UMAP

tissue Gene Sets

54 sets of genes wiith high or low expression in each tissue relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset.

Gene Set Description
Adipose - Subcutaneous
Adipose - Visceral (Omentum)
Adrenal Gland Either of a pair of complex endocrine organs near the anterior medial border of the kidney consisting of a mesodermal cortex that produces glucocorticoid, mineralocorticoid, and androgenic hormones and an ectodermal medulla that produces epinephrine and norepinephrine.
Artery - Aorta
Artery - Coronary
Artery - Tibial
Bladder A membranous sac in animals that serves as the receptacle of a liquid or contains gas.
Brain - Amygdala
Brain - Anterior cingulate cortex (BA24)
Brain - Caudate (basal ganglia)
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex (BA9)
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens (basal ganglia)
Brain - Putamen (basal ganglia)
Brain - Spinal cord (cervical c-1)
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV-transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver 1: A large very vascular glandular organ of vertebrates that secretes bile and causes important changes in many of the substances contained in the blood (as by converting sugars into glycogen which it stores up until required and by forming urea). 2: Any of various large compound glands associated with the digestive tract of invertebrate animals and probably concerned with the secretion of digestive enzymes.
Lung One of the usually paired compound saccular thoracic organs that constitute the basic respiratory organ of air-breathing vertebrates.
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary One of the typically paired essential female reproductive organs that produce eggs and in vertebrates female sex hormones.
Pancreas A large lobulated gland of vertebrates that secretes digestive enzymes and the hormones insulin and glucagon.
Pituitary
Prostate
Skin - Not Sun Exposed (Suprapubic)
Skin - Sun Exposed (Lower leg)
Small Intestine - Terminal Ileum
Spleen A highly vascular ductless organ that is located in the left abdominal region near the stomach or intestine of most vertebrates and is concerned with final destruction of red blood cells, filtration and storage of blood, and production of lymphocytes.
Stomach A dilatation of the alimentary canal of a vertebrate communicating anteriorly with the esophagus and posteriorly with the duodenum.
Testis A typically paired male reproductive gland that produces sperm and that in most mammals is contained within the scrotum at sexual maturity.
Thyroid
Uterus An organ of the female mammal for containing and usually for nourishing the young during development previous to birth.
Vagina A canal in a female mammal that leads from the uterus to the external orifice of the genital canal.
Whole Blood