MoTrPAC Rat Endurance Exercise Training Dataset

Description RNA-seq gene expression profiles for rat tissue samples across 4 time points and 19 tissues
Measurement gene expression by RNA-seq
Association gene-tissue sample association by differential expression of gene across tissue samples
Category transcriptomics
Resource Molecular Transducers of Physical Activity Consortium
Citation(s)
Last Updated 2023 Oct 11
Stats
  1. 12426 genes
  2. 142 tissue samples
  3. 94792 gene-tissue sample associations

Data Access

API
Script

Visualizations

  • Gene Attribute

  • Gene Similarity

  • Attribute Similarity

  • UMAP

tissue sample Gene Sets

142 sets of genes with high or low expression in each tissue sample relative to other tissue samples from the MoTrPAC Rat Endurance Exercise Training dataset.

Gene Set Description
t30-blood-rna_female_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t30-blood-rna_female_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t30-blood-rna_female_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t30-blood-rna_female_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t30-blood-rna_male_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t30-blood-rna_male_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t30-blood-rna_male_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t30-blood-rna_male_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t52-hippocampus_female_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t52-hippocampus_female_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t52-hippocampus_female_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t52-hippocampus_female_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t52-hippocampus_male_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t52-hippocampus_male_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t52-hippocampus_male_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t52-hippocampus_male_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t53-cortex_female_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t53-cortex_female_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t53-cortex_female_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t53-cortex_female_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t53-cortex_male_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t53-cortex_male_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t53-cortex_male_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t53-cortex_male_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t54-hypothalamus_female_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t54-hypothalamus_female_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t54-hypothalamus_female_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t54-hypothalamus_female_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t54-hypothalamus_male_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t54-hypothalamus_male_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t54-hypothalamus_male_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t54-hypothalamus_male_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t55-gastrocnemius_female_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t55-gastrocnemius_female_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t55-gastrocnemius_female_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t55-gastrocnemius_female_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t55-gastrocnemius_male_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t55-gastrocnemius_male_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t55-gastrocnemius_male_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t55-gastrocnemius_male_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t56-vastus-lateralis_female_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t56-vastus-lateralis_female_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t56-vastus-lateralis_female_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t56-vastus-lateralis_female_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t56-vastus-lateralis_male_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t56-vastus-lateralis_male_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t56-vastus-lateralis_male_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t56-vastus-lateralis_male_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t58-heart_female_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t58-heart_female_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t58-heart_female_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t58-heart_female_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t58-heart_male_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t58-heart_male_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t58-heart_male_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t58-heart_male_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t59-kidney_female_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t59-kidney_female_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t59-kidney_female_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t59-kidney_female_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t59-kidney_male_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t59-kidney_male_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t59-kidney_male_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t59-kidney_male_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t60-adrenal_female_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t60-adrenal_female_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t60-adrenal_female_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t60-adrenal_female_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t60-adrenal_male_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t60-adrenal_male_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t60-adrenal_male_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t60-adrenal_male_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t61-colon_female_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t61-colon_female_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t61-colon_female_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t61-colon_female_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t61-colon_male_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t61-colon_male_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t61-colon_male_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t61-colon_male_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t62-spleen_female_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t62-spleen_female_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t62-spleen_female_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t62-spleen_female_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t62-spleen_male_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t62-spleen_male_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t62-spleen_male_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t62-spleen_male_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t63-testes_male_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t63-testes_male_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t63-testes_male_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t63-testes_male_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t64-ovaries_female_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t64-ovaries_female_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t64-ovaries_female_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t64-ovaries_female_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t66-lung_female_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t66-lung_female_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t66-lung_female_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t66-lung_female_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t66-lung_male_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t66-lung_male_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t66-lung_male_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t66-lung_male_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t67-small-intestine_female_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t67-small-intestine_female_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t67-small-intestine_female_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t67-small-intestine_female_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t67-small-intestine_male_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t67-small-intestine_male_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t67-small-intestine_male_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t67-small-intestine_male_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t68-liver_female_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t68-liver_female_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t68-liver_female_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t68-liver_female_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t68-liver_male_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t68-liver_male_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t68-liver_male_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t68-liver_male_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t69-brown-adipose_female_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t69-brown-adipose_female_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t69-brown-adipose_female_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t69-brown-adipose_female_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t69-brown-adipose_male_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t69-brown-adipose_male_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t69-brown-adipose_male_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t69-brown-adipose_male_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t70-white-adipose_female_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t70-white-adipose_female_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t70-white-adipose_female_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t70-white-adipose_female_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t70-white-adipose_male_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t70-white-adipose_male_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t70-white-adipose_male_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t70-white-adipose_male_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t99-vena-cava_female_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t99-vena-cava_female_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t99-vena-cava_male_1w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t99-vena-cava_male_2w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t99-vena-cava_male_4w rat tissue sample identified by [tissue]_[sex]_[age in weeks]
t99-vena-cava_male_8w rat tissue sample identified by [tissue]_[sex]_[age in weeks]