| Name | AFG2 interacting ribosome maturation factor |
| Description | Involved in ribosomal large subunit biogenesis. Located in cytosol; nucleolus; and nucleoplasm. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nRecent studies have uncovered that AIRIM (alias C1orf109) plays an essential role in ribosome biogenesis by controlling a late cytoplasmic maturation step of the pre‐60S ribosomal subunit. In a genome‐wide loss‐of‐function screen, AIRIM, together with SPATA5, CINP, and SPATA5L1, was shown to be critical for proper ribosome assembly, with its absence leading to impaired global protein synthesis and linking its dysfunction to neurodevelopmental disorders associated with recessive SPATA5 mutations."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "In addition, AIRIM was identified as a substrate for casein kinase II (CK2). Functional analyses revealed that this gene is regulated in a cell cycle–dependent manner and is involved in the control of cell proliferation and cell cycle progression, suggesting that AIRIM contributes to fundamental aspects of cell division and growth control."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "Moreover, AIRIM is implicated in oncogenic processes. Studies in liver cancer have demonstrated that overexpression of AIRIM correlates with advanced tumor stages, vascular invasion, and poorer overall survival. Mechanistic investigations further revealed that AIRIM enhances Wnt signaling by interacting with CK2, leading to upregulation of non-phosphorylated β-catenin and its downstream genes such as CyclinD1, c-Myc, and MMP7, thereby promoting tumor proliferation, migration, and invasion."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Chunyang Ni, Daniel A Schmitz, Jeon Lee, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Labeling of heterochronic ribosomes reveals C1ORF109 and SPATA5 control a late step in human ribosome assembly."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Rep (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.celrep.2022.110597"}], "href": "https://doi.org/10.1016/j.celrep.2022.110597"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35354024"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35354024"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Shan-shan Liu, Hong-xia Zheng, Hua-dong Jiang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification and characterization of a novel gene, c1orf109, encoding a CK2 substrate that is involved in cancer cell proliferation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biomed Sci (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/1423-0127-19-49"}], "href": "https://doi.org/10.1186/1423-0127-19-49"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22548824"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22548824"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Jing Sun, Xiupeng Zhang, Yefei Sun "}, {"type": "b", "children": [{"type": "t", "text": "C1orf109 promotes malignant phenotype of liver cancer via wnt signaling pathway in a CK2-dependent manner."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Mol Histol (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s10735-023-10117-w"}], "href": "https://doi.org/10.1007/s10735-023-10117-w"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36988773"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36988773"}]}]}]}
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| NCBI Gene ID | 54955 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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AIRIM has 904 functional associations with biological entities spanning 6 categories (chemical, functional term, phrase or reference, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 17 datasets.
Click the + buttons to view associations for AIRIM from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of AIRIM gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset. | |
| Carcinogenome Chemical Perturbation Carcinogenicity Signatures | small molecule perturbations changing expression of AIRIM gene from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset. | |
| CM4AI KOLF21J CRISPRi Gene Perturbation Atlas | gene perturbations changing expression of AIRIM gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset. | |
| CM4AI U2OS Cell Map Protein Localization Assemblies | assemblies containing AIRIM protein from integrated AP-MS and IF data from the CM4AI U2OS Cell Map Protein Localization Assemblies dataset. | |
| GO Biological Process Annotations 2025 | biological processes involving AIRIM gene from the curated GO Biological Process Annotations2025 dataset. | |
| GO Cellular Component Annotations 2025 | cellular components containing AIRIM protein from the curated GO Cellular Component Annotations 2025 dataset. | |
| GTEx eQTL 2025 | SNPs regulating expression of AIRIM gene from the GTEx eQTL 2025 dataset. | |
| GWAS Catalog SNP-Phenotype Associations 2025 | phenotypes associated with AIRIM gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of AIRIM gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| JASPAR Predicted Mouse Transcription Factor Targets 2025 | transcription factors regulating expression of AIRIM gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset. | |
| Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures | gene perturbations changing expression of AIRIM gene from the Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures dataset. | |
| Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures | gene perturbations changing expression of AIRIM gene from the Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures dataset. | |
| Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures | gene perturbations changing expression of AIRIM gene from the Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures dataset. | |
| Rummagene Transcription Factor Associations 2026 | transcription factors regulating expression of AIRIM gene from the Rummagene Transcription Factor Associations 2026 dataset. | |
| RummaGEO Drug Perturbation Signatures | drug perturbations changing expression of AIRIM gene from the RummaGEO Drug Perturbation Signatures dataset. | |
| RummaGEO Gene Perturbation Signatures | gene perturbations changing expression of AIRIM gene from the RummaGEO Gene Perturbation Signatures dataset. | |
| Sci-Plex Drug Perturbation Signatures | drug perturbations changing expression of AIRIM gene from the Sci-Plex Drug Perturbation Signatures dataset. | |