| Name | ASAP1 intronic transcript 1 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n ASAP1‐IT1 is a long non‐coding RNA whose expression and functional impact appear to be context dependent. In ovarian cancer, elevated ASAP1‐IT1 levels were more frequently observed in low‐grade tumors and early‐stage disease, and correlated with improved overall survival, suggesting a potential association with less aggressive tumor behavior."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In contrast, in several other malignancies ASAP1‐IT1 is upregulated and acts as an oncogenic driver. In non‐small cell lung cancer (NSCLC), for example, increased expression of ASAP1‐IT1 not only promotes cell proliferation, invasion, and metastasis through activation of the PTEN/AKT signaling pathway, but also enhances cancer stem cell properties via a mechanism involving sequestration of miR‐509-3p and subsequent upregulation of YAP1"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": ";."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " Similarly, in cholangiocarcinoma, ASAP1‐IT1 facilitates proliferation, migration, and epithelial–mesenchymal transition by modulating components of the hedgehog signaling pathway (Smo and Gli1)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": ", while in urinary bladder cancer its overexpression is associated with advanced tumor stage, poor differentiation, and enhanced stemness, contributing to an unfavorable prognosis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": " Moreover, integrative bioinformatic analyses in intervertebral disc degeneration have identified ASAP1‐IT1 as a key characteristic gene, with its expression correlating with specific immune cell infiltrates, hinting at a broader role in disease pathogenesis beyond cancer."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Together, these findings suggest that while ASAP1‐IT1 may be associated with less aggressive disease in the context of ovarian cancer, its upregulation in other malignancies promotes oncogenic phenotypes by enhancing proliferation, invasion, metastasis, and cancer stem cell features—functions that are mediated through diverse signaling pathways including PTEN/AKT, hedgehog, and YAP1. This multifaceted role positions ASAP1‐IT1 as a promising candidate for further study as a diagnostic and therapeutic target across a spectrum of pathological conditions.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Yuanyuan Fu, Nicoletta Biglia, Zhanwei Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNAs, ASAP1-IT1, FAM215A, and LINC00472, in epithelial ovarian cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Gynecol Oncol (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ygyno.2016.09.021"}], "href": "https://doi.org/10.1016/j.ygyno.2016.09.021"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27667152"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27667152"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "L Zhang, S-B Shi, Y Zhu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA ASAP1-IT1 promotes cell proliferation, invasion and metastasis through the PTEN/AKT signaling axis in non-small cell lung cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur Rev Med Pharmacol Sci (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.26355/eurrev_201801_14111"}], "href": "https://doi.org/10.26355/eurrev_201801_14111"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29364481"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29364481"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Yantao Liu, Yuping Yang, Lingli Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA ASAP1-IT1 enhances cancer cell stemness via regulating miR-509-3p/YAP1 axis in NSCLC."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Cell Int (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12935-021-02270-7"}], "href": "https://doi.org/10.1186/s12935-021-02270-7"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34715859"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34715859"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Linqi Guo, Yu Zhou, Ying Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA ASAP1-IT1 positively modulates the development of cholangiocarcinoma via hedgehog signaling pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biomed Pharmacother (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.biopha.2018.04.015"}], "href": "https://doi.org/10.1016/j.biopha.2018.04.015"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29653361"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29653361"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "L Yang, Y Xue, J Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long noncoding RNA ASAP1-IT1 promotes cancer stemness and predicts a poor prognosis in patients with bladder cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neoplasma (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.4149/neo_2017_606"}], "href": "https://doi.org/10.4149/neo_2017_606"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28895409"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28895409"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Xiaobo Ma, Junqiang Su, Bo Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of Characteristic Genes in Whole Blood of Intervertebral Disc Degeneration Patients by Weighted Gene Coexpression Network Analysis (WGCNA)."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Comput Math Methods Med (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2022/6609901"}], "href": "https://doi.org/10.1155/2022/6609901"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35069789"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35069789"}]}]}]}
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| Synonyms | ASAP1IT1, ASAP1-IT, HSPC054, DDEF1IT1, ASAP1IT, NCRNA00050 |
| NCBI Gene ID | 29065 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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ASAP1-IT1 has 1,265 functional associations with biological entities spanning 7 categories (molecular profile, organism, chemical, disease, phenotype or trait, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 27 datasets.
Click the + buttons to view associations for ASAP1-IT1 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of ASAP1-IT1 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray | tissue samples with high or low expression of ASAP1-IT1 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset. | |
| Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of ASAP1-IT1 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset. | |
| BioGPS Cell Line Gene Expression Profiles | cell lines with high or low expression of ASAP1-IT1 gene relative to other cell lines from the BioGPS Cell Line Gene Expression Profiles dataset. | |
| BioGPS Human Cell Type and Tissue Gene Expression Profiles | cell types and tissues with high or low expression of ASAP1-IT1 gene relative to other cell types and tissues from the BioGPS Human Cell Type and Tissue Gene Expression Profiles dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of ASAP1-IT1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| CCLE Cell Line Gene Expression Profiles | cell lines with high or low expression of ASAP1-IT1 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of ASAP1-IT1 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of ASAP1-IT1 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| CMAP Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of ASAP1-IT1 gene from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of ASAP1-IT1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at ASAP1-IT1 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of ASAP1-IT1 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of ASAP1-IT1 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GDSC Cell Line Gene Expression Profiles | cell lines with high or low expression of ASAP1-IT1 gene relative to other cell lines from the GDSC Cell Line Gene Expression Profiles dataset. | |
| GEO Signatures of Differentially Expressed Genes for Diseases | disease perturbations changing expression of ASAP1-IT1 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of ASAP1-IT1 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of ASAP1-IT1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of ASAP1-IT1 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of ASAP1-IT1 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of ASAP1-IT1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of ASAP1-IT1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| LOCATE Predicted Protein Localization Annotations | cellular components predicted to contain ASAP1-IT1 protein from the LOCATE Predicted Protein Localization Annotations dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of ASAP1-IT1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations | gene perturbations changing expression of ASAP1-IT1 gene from the MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at ASAP1-IT1 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |
| TCGA Signatures of Differentially Expressed Genes for Tumors | tissue samples with high or low expression of ASAP1-IT1 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset. | |