ATP5F1C Gene

Name ATP synthase F1 subunit gamma
Description This gene encodes a subunit of mitochondrial ATP synthase. Mitochondrial ATP synthase catalyzes ATP synthesis, utilizing an electrochemical gradient of protons across the inner membrane during oxidative phosphorylation. ATP synthase is composed of two linked multi-subunit complexes: the soluble catalytic core, F1, and the membrane-spanning component, Fo, comprising the proton channel. The catalytic portion of mitochondrial ATP synthase consists of 5 different subunits (alpha, beta, gamma, delta, and epsilon) assembled with a stoichiometry of 3 alpha, 3 beta, and a single representative of the other 3. The proton channel consists of three main subunits (a, b, c). This gene encodes the gamma subunit of the catalytic core. Alternatively spliced transcript variants encoding different isoforms have been identified. This gene also has a pseudogene on chromosome 14. [provided by RefSeq, Jul 2008]
Summary
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In the broader context of cell function, its energy‐generating activity underpins many energy‐intensive processes—including some aspects of immune cell activation and signaling—even though these studies focused primarily on signal transduction pathways mediated by kinases such as Syk and adaptor molecules like CARD9."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "12"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn contrast, the collection of abstracts provided centers on diverse aspects of immune receptor signaling—including studies of dectin‐1–Syk–CARD9 pathways, integrin‐ and Fc receptor–mediated responses, and inflammasome activation in contexts ranging from antifungal immunity to platelet function and lymphatic development. These studies highlight the roles of kinases (especially Syk), adaptor proteins, and downstream effectors in mediating proinflammatory and regulatory responses. While these signaling cascades are energy‐dependent processes that rely on robust mitochondrial function to support cell activation and survival, none of the abstracts directly address ATP5F1C or its mitochondrial bioenergetic role."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "13", "end_ref": "35"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Achim Obergfell, Koji Eto, Attila Mocsai, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Coordinate interactions of Csk, Src, and Syk kinases with [alpha]IIb[beta]3 initiate integrin signaling to the cytoskeleton."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biol (2002)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1083/jcb.200112113"}], "href": "https://doi.org/10.1083/jcb.200112113"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "11940607"}], "href": "https://pubmed.ncbi.nlm.nih.gov/11940607"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Attila Mócsai, Meijuan Zhou, Fanying Meng, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Syk is required for integrin signaling in neutrophils."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Immunity (2002)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/s1074-7613(02)00303-5"}], "href": "https://doi.org/10.1016/s1074-7613(02"}, {"type": "t", "text": "00303-5) PMID: "}, {"type": "a", "children": [{"type": "t", "text": "11970878"}], "href": "https://pubmed.ncbi.nlm.nih.gov/11970878"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Farhad Abtahian, Anastasia Guerriero, Eric Sebzda, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Syk- and CARD9-dependent coupling of innate immunity to the induction of T helper cells that produce interleukin 17."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Immunol (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ni1460"}], "href": "https://doi.org/10.1038/ni1460"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17450144"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17450144"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Emil H Palacios, Arthur Weiss "}, {"type": "b", "children": [{"type": "t", "text": "Distinct roles for Syk and ZAP-70 during early thymocyte development."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Exp Med (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1084/jem.20070405"}], "href": "https://doi.org/10.1084/jem.20070405"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17606633"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17606633"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Wei Zou, Jennifer L Reeve, Yuli Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "DAP12 couples c-Fms activation to the osteoclast cytoskeleton by recruitment of Syk."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.molcel.2008.06.023"}], "href": "https://doi.org/10.1016/j.molcel.2008.06.023"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18691974"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18691974"}]}, {"type": "r", "ref": 14, "children": [{"type": "t", "text": "Salomé Leibundgut-Landmann, Fabiola Osorio, Gordon D Brown, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Stimulation of dendritic cells via the dectin-1/Syk pathway allows priming of cytotoxic T-cell responses."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Blood (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1182/blood-2008-05-158469"}], "href": "https://doi.org/10.1182/blood-2008-05-158469"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18818389"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18818389"}]}, {"type": "r", "ref": 15, "children": [{"type": "t", "text": "Laura Helming, Elena Tomasello, Themis R Kyriakides, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Essential role of DAP12 signaling in macrophage programming into a fusion-competent state."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Signal (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1126/scisignal.1159665"}], "href": "https://doi.org/10.1126/scisignal.1159665"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18957693"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18957693"}]}, {"type": "r", "ref": 16, "children": [{"type": "t", "text": "Ryan M Young, Ian R Hardy, Raedun L Clarke, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Macrophages generate reactive oxygen species in response to minimally oxidized low-density lipoprotein: toll-like receptor 4- and spleen tyrosine kinase-dependent activation of NADPH oxidase 2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Circ Res (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1161/CIRCRESAHA.108.181040"}], "href": "https://doi.org/10.1161/CIRCRESAHA.108.181040"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19096031"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19096031"}]}, {"type": "r", "ref": 18, "children": [{"type": "t", "text": "Olaf Gross, Hendrik Poeck, Michael Bscheider, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Syk kinase signalling couples to the Nlrp3 inflammasome for anti-fungal host defence."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nature (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/nature07965"}], "href": "https://doi.org/10.1038/nature07965"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19339971"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19339971"}]}, {"type": "r", "ref": 19, "children": [{"type": "t", "text": "Jessica A Van Ziffle, Clifford A Lowell "}, {"type": "b", "children": [{"type": "t", "text": "Neutrophil-specific deletion of Syk kinase results in reduced host defense to bacterial infection."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Blood (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1182/blood-2009-05-220806"}], "href": "https://doi.org/10.1182/blood-2009-05-220806"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19797524"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19797524"}]}, {"type": "r", "ref": 20, "children": [{"type": "t", "text": "Cynthia K Hahn, Jacob E Berchuck, Kenneth N Ross, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Proteomic and genetic approaches identify Syk as an AML target."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Cell (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ccr.2009.08.018"}], "href": "https://doi.org/10.1016/j.ccr.2009.08.018"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19800574"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19800574"}]}, {"type": "r", "ref": 21, "children": [{"type": "t", "text": "Dafydd H Thomas, Todd M Getz, Tiffanny N Newman, et al. 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NCBI Gene ID 509
API
Download Associations
Predicted Functions View ATP5F1C's ARCHS4 Predicted Functions.
Co-expressed Genes View ATP5F1C's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View ATP5F1C's ARCHS4 Predicted Functions.

Functional Associations

ATP5F1C has 3,080 functional associations with biological entities spanning 6 categories (chemical, functional term, phrase or reference, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 44 datasets.

Click the + buttons to view associations for ATP5F1C from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles tissue samples with high or low expression of ATP5F1C gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset.
Carcinogenome Chemical Perturbation Carcinogenicity Signatures small molecule perturbations changing expression of ATP5F1C gene from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.
CCLE Cell Line Proteomics Cell lines associated with ATP5F1C protein from the CCLE Cell Line Proteomics dataset.
CellMarker Gene-Cell Type Associations cell types associated with ATP5F1C gene from the CellMarker Gene-Cell Type Associations dataset.
ChEA Transcription Factor Targets 2022 transcription factors binding the promoter of ATP5F1C gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets 2022 dataset.
CM4AI KOLF21J CRISPRi Gene Perturbation Atlas gene perturbations changing expression of ATP5F1C gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset.
COMPARTMENTS Curated Protein Localization Evidence Scores 2025 cellular components containing ATP5F1C protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset.
COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 cellular components co-occuring with ATP5F1C protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset.
DeepCoverMOA Drug Mechanisms of Action small molecule perturbations with high or low expression of ATP5F1C protein relative to other small molecule perturbations from the DeepCoverMOA Drug Mechanisms of Action dataset.
DISEASES Experimental Gene-Disease Association Evidence Scores 2025 diseases associated with ATP5F1C gene in GWAS datasets from the DISEASES Experimental Gene-Disease Assocation Evidence Scores 2025 dataset.
DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 diseases co-occuring with ATP5F1C gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset.
DisGeNET Gene-Disease Associations diseases associated with ATP5F1C gene in GWAS and other genetic association datasets from the DisGeNET Gene-Disease Associations dataset.
DisGeNET Gene-Phenotype Associations phenotypes associated with ATP5F1C gene in GWAS and other genetic association datasets from the DisGeNET Gene-Phenoptype Associations dataset.
GO Biological Process Annotations 2023 biological processes involving ATP5F1C gene from the curated GO Biological Process Annotations 2023 dataset.
GO Biological Process Annotations 2025 biological processes involving ATP5F1C gene from the curated GO Biological Process Annotations2025 dataset.
GO Cellular Component Annotations 2023 cellular components containing ATP5F1C protein from the curated GO Cellular Component Annotations 2023 dataset.
GO Cellular Component Annotations 2025 cellular components containing ATP5F1C protein from the curated GO Cellular Component Annotations 2025 dataset.
GO Molecular Function Annotations 2023 molecular functions performed by ATP5F1C gene from the curated GO Molecular Function Annotations 2023 dataset.
GTEx eQTL 2025 SNPs regulating expression of ATP5F1C gene from the GTEx eQTL 2025 dataset.
GTEx Tissue Gene Expression Profiles 2023 tissues with high or low expression of ATP5F1C gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset.
GTEx Tissue-Specific Aging Signatures tissue samples with high or low expression of ATP5F1C gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset.
GWAS Catalog SNP-Phenotype Associations 2025 phenotypes associated with ATP5F1C gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset.
JASPAR Predicted Human Transcription Factor Targets 2025 transcription factors regulating expression of ATP5F1C gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.
JASPAR Predicted Mouse Transcription Factor Targets 2025 transcription factors regulating expression of ATP5F1C gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset.
KEGG Pathways 2026 pathways involving ATP5F1C protein from the KEGG Pathways 2026 dataset.
LINCS L1000 CMAP Chemical Perturbation Consensus Signatures small molecule perturbations changing expression of ATP5F1C gene from the LINCS L1000 CMAP Chemical Perturbations Consensus Signatures dataset.
LINCS L1000 CMAP CRISPR Knockout Consensus Signatures gene perturbations changing expression of ATP5F1C gene from the LINCS L1000 CMAP CRISPR Knockout Consensus Signatures dataset.
MoTrPAC Rat Endurance Exercise Training tissue samples with high or low expression of ATP5F1C gene relative to other tissue samples from the MoTrPAC Rat Endurance Exercise Training dataset.
NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles drug perturbations changing expression of ATP5F1C gene from the NIBR DRUG-seq U2OS MoA Box dataset.
PFOCR Pathway Figure Associations 2023 pathways involving ATP5F1C protein from the PFOCR Pathway Figure Associations 2023 dataset.
PFOCR Pathway Figure Associations 2024 pathways involving ATP5F1C protein from the Wikipathways PFOCR 2024 dataset.
Reactome Pathways 2024 pathways involving ATP5F1C protein from the Reactome Pathways 2024 dataset.
Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures gene perturbations changing expression of ATP5F1C gene from the Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures dataset.
Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures gene perturbations changing expression of ATP5F1C gene from the Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures dataset.
Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures gene perturbations changing expression of ATP5F1C gene from the Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures dataset.
Rummagene Transcription Factor Associations 2026 transcription factors regulating expression of ATP5F1C gene from the Rummagene Transcription Factor Associations 2026 dataset.
RummaGEO Drug Perturbation Signatures drug perturbations changing expression of ATP5F1C gene from the RummaGEO Drug Perturbation Signatures dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of ATP5F1C gene from the RummaGEO Gene Perturbation Signatures dataset.
Sci-Plex Drug Perturbation Signatures drug perturbations changing expression of ATP5F1C gene from the Sci-Plex Drug Perturbation Signatures dataset.
Tahoe Therapeutics Tahoe 100M Perturbation Atlas drug perturbations changing expression of ATP5F1C gene from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
TISSUES Curated Tissue Protein Expression Evidence Scores 2025 tissues with high expression of ATP5F1C protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 tissues with high expression of ATP5F1C protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 tissues co-occuring with ATP5F1C protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset.
WikiPathways Pathways 2024 pathways involving ATP5F1C protein from the WikiPathways Pathways 2024 dataset.