| Name | BOK antisense RNA 1 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n BOK‐AS1 (also referred to as BOKAS) is a long non‐coding RNA that is transcribed from the Bok locus in an antisense orientation and plays a regulatory role in cell survival and response to stress. In one study addressing esophageal squamous cell carcinoma, radiotherapy was found to up‐regulate BOKAS, which in turn promoted the expression of the oncofetal gene WISP1. This upregulation contributed to radioresistance by mitigating irradiation‐induced DNA damage and activating the PI3K pathway, thereby creating a positive feedback loop that further enhanced WISP1 expression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In a separate investigation, BOKAS was characterized as a natural antisense transcript of the proapoptotic Bok gene. Although BOKAS overexpression on its own did not markedly affect apoptosis, it was capable of inhibiting Bok‐induced apoptosis in HeLa cells. This observation suggests that BOK‐AS1/BOKAS serves as a negative regulator of Bok‐mediated apoptotic signaling, with expression detected in testis and certain cancer tissues."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In summary, BOK‐AS1/BOKAS appears to function in a context‐dependent manner by modulating apoptosis and influencing cellular responses to radiotherapy. Its role in promoting WISP1 expression and radioresistance in esophageal cancer cells, coupled with its ability to attenuate Bok‐induced apoptosis, underscores its potential relevance in tumorigenesis and as a candidate target for improving therapeutic strategies.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Hongfang Zhang, Honglei Luo, Zhaoyang Hu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Targeting WISP1 to sensitize esophageal squamous cell carcinoma to irradiation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncotarget (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/oncotarget.3358"}], "href": "https://doi.org/10.18632/oncotarget.3358"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25749038"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25749038"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Hong Zhang, Shuping Gao, Christian De Geyter "}, {"type": "b", "children": [{"type": "t", "text": "A natural antisense transcript, BOKAS, regulates the pro-apoptotic activity of human Bok."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Oncol (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/ijo_00000241"}], "href": "https://doi.org/10.3892/ijo_00000241"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19287972"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19287972"}]}]}]}
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| Synonyms | NATOB, BOK-AS, BOKAS, NCRNA00151 |
| NCBI Gene ID | 100379249 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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BOK-AS1 has 989 functional associations with biological entities spanning 4 categories (molecular profile, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 12 datasets.
Click the + buttons to view associations for BOK-AS1 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of BOK-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at BOK-AS1 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of BOK-AS1 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of BOK-AS1 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of BOK-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of BOK-AS1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| GWASdb SNP-Disease Associations | diseases associated with BOK-AS1 gene in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset. | |
| GWASdb SNP-Phenotype Associations | phenotypes associated with BOK-AS1 gene in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of BOK-AS1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of BOK-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of BOK-AS1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at BOK-AS1 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |