| Name | BTBD3 antisense RNA 1 |
| Summary |
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These investigations demonstrate that TBX20 regulates key processes such as myocardial proliferation, chamber differentiation, and the balance between cardiac gene activation and repression through interactions with transcriptional co-factors and signaling pathways (including BMP and Wnt/β‐catenin pathways)."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "25"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nNotably, while these publications provide a deep insight into TBX20‐dependent gene regulatory networks in both embryonic cardiac morphogenesis and adult heart function, none of the abstracts mention or characterize BTBD3‑AS1. In the context of these studies, the function of BTBD3‑AS1 remains unaddressed, indicating that its biological role—whether as a regulatory noncoding RNA or otherwise—has yet to be elucidated. Consequently, further dedicated research will be required to determine any possible involvement of BTBD3‑AS1 in cardiac development or disease."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "25"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Timothy F Plageman, Katherine E Yutzey "}, {"type": "b", "children": [{"type": "t", "text": "Differential expression and function of Tbx5 and Tbx20 in cardiac development."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M314041200"}], "href": "https://doi.org/10.1074/jbc.M314041200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "14978031"}], "href": "https://pubmed.ncbi.nlm.nih.gov/14978031"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Chen-Leng Cai, Wenlai Zhou, Lei Yang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "T-box genes coordinate regional rates of proliferation and regional specification during cardiogenesis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Development (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1242/dev.01832"}], "href": "https://doi.org/10.1242/dev.01832"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15843407"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15843407"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Jun K Takeuchi, Maria Mileikovskaia, Kazuko Koshiba-Takeuchi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Tbx20 dose-dependently regulates transcription factor networks required for mouse heart and motoneuron development."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Development (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1242/dev.01827"}], "href": "https://doi.org/10.1242/dev.01827"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15843409"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15843409"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Fiona A Stennard, Mauro W Costa, Donna Lai, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Murine T-box transcription factor Tbx20 acts as a repressor during heart development, and is essential for adult heart integrity, function and adaptation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Development (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1242/dev.01799"}], "href": "https://doi.org/10.1242/dev.01799"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15843414"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15843414"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Manvendra K Singh, Vincent M Christoffels, José M Dias, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Tbx20 is essential for cardiac chamber differentiation and repression of Tbx2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Development (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1242/dev.01854"}], "href": "https://doi.org/10.1242/dev.01854"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15901664"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15901664"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Mi-Ryoung Song, Ryuichi Shirasaki, Chen-Leng Cai, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Conformational stability and DNA binding specificity of the cardiac T-box transcription factor Tbx20."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Mol Biol (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.jmb.2009.04.056"}], "href": "https://doi.org/10.1016/j.jmb.2009.04.056"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19414016"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19414016"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Reena Singh, Thomas Horsthuis, Henner F Farin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Tbx20 interacts with smads to confine tbx2 expression to the atrioventricular canal."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Circ Res (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1161/CIRCRESAHA.109.196063"}], "href": "https://doi.org/10.1161/CIRCRESAHA.109.196063"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19661464"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19661464"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Wenjun Zhang, Hanying Chen, Yong Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Tbx20 transcription factor is a downstream mediator for bone morphogenetic protein-10 in regulating cardiac ventricular wall development and function."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M111.279679"}], "href": "https://doi.org/10.1074/jbc.M111.279679"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21890625"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21890625"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Xiaoqiang Cai, Aya Nomura-Kitabayashi, Weibin Cai, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Myocardial Tbx20 regulates early atrioventricular canal formation and endocardial epithelial-mesenchymal transition via Bmp2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Dev Biol (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ydbio.2011.09.023"}], "href": "https://doi.org/10.1016/j.ydbio.2011.09.023"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21983003"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21983003"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Tao Shen, Ivy Aneas, Noboru Sakabe, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Tbx20 regulates a genetic program essential to adult mouse cardiomyocyte function."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Invest (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1172/JCI59472"}], "href": "https://doi.org/10.1172/JCI59472"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22080862"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22080862"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Santanu Chakraborty, Katherine E Yutzey "}, {"type": "b", "children": [{"type": "t", "text": "Tbx20 regulation of cardiac cell proliferation and lineage specialization during embryonic and fetal development in vivo."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Dev Biol (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ydbio.2011.12.034"}], "href": "https://doi.org/10.1016/j.ydbio.2011.12.034"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22226977"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22226977"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Noboru J Sakabe, Ivy Aneas, Tao Shen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Dual transcriptional activator and repressor roles of TBX20 regulate adult cardiac structure and function."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mol Genet (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/hmg/dds034"}], "href": "https://doi.org/10.1093/hmg/dds034"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22328084"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22328084"}]}, {"type": "r", "ref": 14, "children": [{"type": "t", "text": "Santanu Chakraborty, Arunima Sengupta, Katherine E Yutzey "}, {"type": "b", "children": [{"type": "t", "text": "Tbx20 promotes cardiomyocyte proliferation and persistence of fetal characteristics in adult mouse hearts."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Mol Cell Cardiol (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.yjmcc.2013.05.018"}], "href": "https://doi.org/10.1016/j.yjmcc.2013.05.018"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23751911"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23751911"}]}, {"type": "r", "ref": 15, "children": [{"type": "t", "text": "Xiaoqiang Cai, Weijia Zhang, Jun Hu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Tbx20 acts upstream of Wnt signaling to regulate endocardial cushion formation and valve remodeling during mouse cardiogenesis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Development (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1242/dev.092502"}], "href": "https://doi.org/10.1242/dev.092502"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23824573"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23824573"}]}, {"type": "r", "ref": 16, "children": [{"type": "t", "text": "Svetlana Gavrilov, Richard P Harvey, Virginia E Papaioannou "}, {"type": "b", "children": [{"type": "t", "text": "Lack of genetic interaction between Tbx20 and Tbx3 in early mouse heart development."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0070149"}], "href": "https://doi.org/10.1371/journal.pone.0070149"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23936153"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23936153"}]}, {"type": "r", "ref": 17, "children": [{"type": "t", "text": "Erin Kaltenbrun, Todd M Greco, Christopher E Slagle, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A Gro/TLE-NuRD corepressor complex facilitates Tbx20-dependent transcriptional repression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Proteome Res (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1021/pr400818c"}], "href": "https://doi.org/10.1021/pr400818c"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24024827"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24024827"}]}, {"type": "r", "ref": 18, "children": [{"type": "t", "text": "Fu-Li Xiang, Minzhe Guo, Katherine E Yutzey "}, {"type": "b", "children": [{"type": "t", "text": "Overexpression of Tbx20 in Adult Cardiomyocytes Promotes Proliferation and Improves Cardiac Function After Myocardial Infarction."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Circulation (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1161/CIRCULATIONAHA.115.019357"}], "href": "https://doi.org/10.1161/CIRCULATIONAHA.115.019357"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26841808"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26841808"}]}, {"type": "r", "ref": 19, "children": [{"type": "t", "text": "Franziska Greulich, Carsten Rudat, Henner F Farin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Lack of Genetic Interaction between Tbx18 and Tbx2/Tbx20 in Mouse Epicardial Development."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0156787"}], "href": "https://doi.org/10.1371/journal.pone.0156787"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27253890"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27253890"}]}, {"type": "r", "ref": 20, "children": [{"type": "t", "text": "Cornelis J Boogerd, Ivy Aneas, Noboru Sakabe, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Probing chromatin landscape reveals roles of endocardial TBX20 in septation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Invest (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1172/JCI85350"}], "href": "https://doi.org/10.1172/JCI85350"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27348591"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27348591"}]}, {"type": "r", "ref": 21, "children": [{"type": "t", "text": "Leslie Kennedy, Erin Kaltenbrun, Todd M Greco, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Formation of a TBX20-CASZ1 protein complex is protective against dilated cardiomyopathy and critical for cardiac homeostasis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS Genet (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pgen.1007011"}], "href": "https://doi.org/10.1371/journal.pgen.1007011"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28945738"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28945738"}]}, {"type": "r", "ref": 22, "children": [{"type": "t", "text": "Shu Meng, Qilin Gu, Xiaojie Yang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "TBX20 Regulates Angiogenesis Through the Prokineticin 2-Prokineticin Receptor 1 Pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Circulation (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1161/CIRCULATIONAHA.118.033939"}], "href": "https://doi.org/10.1161/CIRCULATIONAHA.118.033939"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29545372"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29545372"}]}, {"type": "r", "ref": 23, "children": [{"type": "t", "text": "Cornelis J Boogerd, Xiaoming Zhu, Ivy Aneas, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Tbx20 Is Required in Mid-Gestation Cardiomyocytes and Plays a Central Role in Atrial Development."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Circ Res (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1161/CIRCRESAHA.118.311339"}], "href": "https://doi.org/10.1161/CIRCRESAHA.118.311339"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29903739"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29903739"}]}, {"type": "r", "ref": 24, "children": [{"type": "t", "text": "Dai Ihara, Yusuke Watanabe, Daiki Seya, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Expression of Hey2 transcription factor in the early embryonic ventricles is controlled through a distal enhancer by Tbx20 and Gata transcription factors."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Dev Biol (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ydbio.2020.02.001"}], "href": "https://doi.org/10.1016/j.ydbio.2020.02.001"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32035085"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32035085"}]}, {"type": "r", "ref": 25, "children": [{"type": "t", "text": "Whitney Edwards, Olivia K Bussey, Frank L Conlon "}, {"type": "b", "children": [{"type": "t", "text": "The Tbx20-TLE interaction is essential for the maintenance of the second heart field."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Development (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1242/dev.201677"}], "href": "https://doi.org/10.1242/dev.201677"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37756602"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37756602"}]}]}]}
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| NCBI Gene ID | 121832811 |
| API | |
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| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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BTBD3-AS1 has 1 functional associations with biological entities spanning 1 categories (cell line, cell type or tissue) extracted from 1 datasets.
Click the + buttons to view associations for BTBD3-AS1 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| GTEx Tissue-Specific Aging Signatures | tissue samples with high or low expression of BTBD3-AS1 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset. | |