BZRAP1-AS1 Gene

Name BZRAP1 antisense RNA 1
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n BZRAP1‐AS1 is a long noncoding RNA whose dysregulation appears to contribute to the pathogenesis of several human diseases through effects on cell proliferation, inflammation, and angiogenesis. In hepatocellular carcinoma, BZRAP1‐AS1 is highly expressed and promotes angiogenesis by binding to DNA methyltransferase 3B (DNMT3b) to induce methylation of the thrombospondin‐1 (THBS1) promoter, thereby reducing THBS1 transcription and enhancing endothelial cell proliferation, migration, and tube formation (1). In rheumatoid arthritis, BZRAP1‐AS1 is downregulated in affected synoviocytes, and its overexpression counteracts disease progression by sequestering miR‐1286. This “sponging” effect leads to the upregulation of COL5A2, which in turn suppresses pathological cell proliferation and inflammatory cytokine production while promoting apoptosis (2). In prostate cancer, BZRAP1‐AS1 has been identified as a key node in transcriptional regulatory networks, suggesting that its altered expression may serve as a novel biomarker and contribute to disease pathogenesis (3). Moreover, genetic variants within the BZRAP1‐AS1 locus have been linked to Alzheimer’s disease pathology, indicating that it could also participate in the modulation of inflammatory and hematological phenotypes associated with neurodegeneration (4). Finally, BZRAP1‐AS1 has emerged from co‐expression and competing endogenous RNA analyses as a differentially expressed hub molecule in both acute myocardial infarction and pediatric acute lymphoblastic leukemia, hinting at a broader involvement in immune regulation and cellular stress responses (5,6).\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n (1)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "; (2)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "; (3)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "; (4)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "; (5)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": "; (6)."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Weiwei Wang, Guoyong Chen, Bing Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA BZRAP1-AS1 silencing suppresses tumor angiogenesis in hepatocellular carcinoma by mediating THBS1 methylation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Transl Med (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12967-019-02145-6"}], "href": "https://doi.org/10.1186/s12967-019-02145-6"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31847842"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31847842"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Junsong Zhu, Shaoheng Tu, Qunwei Qu "}, {"type": "b", "children": [{"type": "t", "text": "lncRNA BZRAP1-AS1 alleviates rheumatoid arthritis by regulating miR-1286/COL5A2 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Immun Inflamm Dis (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/iid3.558"}], "href": "https://doi.org/10.1002/iid3.558"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34766472"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34766472"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Jiufeng Tan, Xuefei Jin, Kaichen Wang "}, {"type": "b", "children": [{"type": "t", "text": "Integrated Bioinformatics Analysis of Potential Biomarkers for Prostate Cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Pathol Oncol Res (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s12253-017-0346-8"}], "href": "https://doi.org/10.1007/s12253-017-0346-8"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29260398"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29260398"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Meng-Shan Tan, Yu-Xiang Yang, Wei Xu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Associations of Alzheimer's disease risk variants with gene expression, amyloidosis, tauopathy, and neurodegeneration."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Alzheimers Res Ther (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s13195-020-00755-7"}], "href": "https://doi.org/10.1186/s13195-020-00755-7"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33419465"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33419465"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Xiao-Ying Lin, Ka-Yuk Yuen, Hai-Lei Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Comprehensive Analysis of Potential Biomarkers of Acute Lymphoblastic Leukemia in Children by Using a Competing Endogenous RNA Network."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Oncol (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2022/4563523"}], "href": "https://doi.org/10.1155/2022/4563523"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35432537"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35432537"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Li Shui Shen, Xiao Feng Hu, Ting Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Integrated network analysis to explore the key mRNAs and lncRNAs in acute myocardial infarction."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Math Biosci Eng (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3934/mbe.2019321"}], "href": "https://doi.org/10.3934/mbe.2019321"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31698570"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31698570"}]}]}]}
Synonyms TSPOAP1-AS1
NCBI Gene ID 100506779
API
Download Associations
Predicted Functions View BZRAP1-AS1's ARCHS4 Predicted Functions.
Co-expressed Genes View BZRAP1-AS1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View BZRAP1-AS1's ARCHS4 Predicted Functions.

Functional Associations

BZRAP1-AS1 has 791 functional associations with biological entities spanning 5 categories (molecular profile, organism, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 15 datasets.

Click the + buttons to view associations for BZRAP1-AS1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of BZRAP1-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of BZRAP1-AS1 gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of BZRAP1-AS1 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of BZRAP1-AS1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of BZRAP1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of BZRAP1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of BZRAP1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of BZRAP1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of BZRAP1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of BZRAP1-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of BZRAP1-AS1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of BZRAP1-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles cell lines with high or low expression of BZRAP1-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of BZRAP1-AS1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of BZRAP1-AS1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.