| Name | chromosome 11 open reading frame 39 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n The abstract (1) describes a study that performed a genome‐wide methylation analysis in glioblastoma multiforme (GBM), identifying over 1,300 differentially methylated genes that play roles in diverse pathways such as immune function and stem cell regulation. However, the study does not specifically mention or elaborate on the function of the gene C11orf39. Thus, based on the information provided in this abstract, no particular role or functional characterization of C11orf39 in GBM pathology is described."}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Rose K Lai, Yanwen Chen, Xiaowei Guan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Genome-wide methylation analyses in glioblastoma multiforme."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0089376"}], "href": "https://doi.org/10.1371/journal.pone.0089376"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24586730"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24586730"}]}]}]}
|
| Synonyms | NTM-AS1, C11orf39 |
| Proteins | CK039_HUMAN |
| NCBI Gene ID | 101929637 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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C11ORF39 has 118 functional associations with biological entities spanning 5 categories (molecular profile, chemical, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 5 datasets.
Click the + buttons to view associations for C11ORF39 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of C11ORF39 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of C11ORF39 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of C11ORF39 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of C11ORF39 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| LOCATE Predicted Protein Localization Annotations | cellular components predicted to contain C11ORF39 protein from the LOCATE Predicted Protein Localization Annotations dataset. | |