| Name | chromosome 11 open reading frame 72 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n The analyses of C11orf72 across these studies indicate that this gene is a recently evolved, human‐specific open reading frame. In one study, C11orf72 (also known as FLJ90834) was predicted to encode a protein that appears to be unique to humans, as its DNA sequence is absent from other primate species. Detailed expression studies in multiple normal and cancerous tissues revealed no detectable transcriptional activity, and its promoter region—located near the housekeeping gene NDUFV1—is highly methylated. When expressed as fluorescent fusion proteins in human cell lines, the C11orf72 protein exhibited diffuse intracellular distribution without any cytotoxic or promitotic effects, suggesting that it lacks robust functional activity in cellular growth or viability (3)."}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n In a separate analysis examining the genetic determinants of cord blood IgE levels—a marker for early allergic sensitization—C11orf72 was identified among several genes (including IL13, IL17A, and ADAM33) significantly associated with neonatal IgE elevation. Although the functional role of C11orf72 remains unestablished, its inclusion in this genetic association study suggests that it may contribute, directly or indirectly, to the complex gene‐gene interactions underlying early immune predisposition. This finding, combined with its apparent lack of overt cellular activity in controlled systems, implies that C11orf72 might be a byproduct of human genomic evolution whose involvement in immune pathways awaits further clarification (1,3,4)."}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n Notably, while another study focused on Machado–Joseph disease (a distinct neurodegenerative condition) did not address C11orf72, its inclusion here underscores the broader context of investigating human-specific genes in disease-associated settings (2). Collectively, these findings support the concept that new protein-coding genes can arise through simple mutational events in the human genome, yet their functional significance—especially in complex pathways such as immune regulation—remains to be fully elucidated.\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n (1)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ", (2)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": ", (3)"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ", (4)."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Jen-Chieh Chang, Ho-Chang Kuo, Te-Yao Hsu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Different genetic associations of the IgE production among fetus, infancy and childhood."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0070362"}], "href": "https://doi.org/10.1371/journal.pone.0070362"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23936416"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23936416"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Fulya Akçimen, Sandra Martins, Calwing Liao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Genome-wide association study identifies genetic factors that modify age at onset in Machado-Joseph disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Aging (Albany NY) (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/aging.102825"}], "href": "https://doi.org/10.18632/aging.102825"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32205469"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32205469"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "K K Baskaev, R V Kholodenko, G V Malakhova, et al. "}, {"type": "b", "children": [{"type": "t", "text": "[Experimental analysis of human specific protein coding open reading frame c11orf72]."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Bioorg Khim (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1134/s1068162013020039"}], "href": "https://doi.org/10.1134/s1068162013020039"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23964515"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23964515"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "K D Yang, J-C Chang, H Chuang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Gene-gene and gene-environment interactions on IgE production in prenatal stage."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Allergy (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/j.1398-9995.2009.02260.x"}], "href": "https://doi.org/10.1111/j.1398-9995.2009.02260.x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19968631"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19968631"}]}]}]}
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| Synonyms | C11orf72 |
| Proteins | CK072_HUMAN |
| NCBI Gene ID | 100505621 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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C11ORF72 has 336 functional associations with biological entities spanning 5 categories (disease, phenotype or trait, functional term, phrase or reference, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 13 datasets.
Click the + buttons to view associations for C11ORF72 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of C11ORF72 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores | diseases co-occuring with C11ORF72 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset. | |
| GeneRIF Biological Term Annotations | biological terms co-occuring with C11ORF72 gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of C11ORF72 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of C11ORF72 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of C11ORF72 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| HPA Cell Line Gene Expression Profiles | cell lines with high or low expression of C11ORF72 gene relative to other cell lines from the HPA Cell Line Gene Expression Profiles dataset. | |
| HPA Tissue Gene Expression Profiles | tissues with high or low expression of C11ORF72 gene relative to other tissues from the HPA Tissue Gene Expression Profiles dataset. | |
| HPA Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of C11ORF72 gene relative to other tissue samples from the HPA Tissue Sample Gene Expression Profiles dataset. | |
| LOCATE Predicted Protein Localization Annotations | cellular components predicted to contain C11ORF72 protein from the LOCATE Predicted Protein Localization Annotations dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of C11ORF72 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations | gene perturbations changing expression of C11ORF72 gene from the MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores | tissues co-occuring with C11ORF72 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset. | |