CABCOCO1 Gene

Name ciliary associated calcium binding coiled-coil 1
Description Predicted to enable calcium ion binding activity. Predicted to act upstream of or within sperm flagellum assembly. Predicted to be located in centrosome; cytoplasm; and sperm flagellum. [provided by Alliance of Genome Resources, Mar 2025]
Summary
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In addition, integrative expression and network analyses in osteosarcoma have identified CABCOCO1 as a key co‐expressed gene correlated with disease prognosis, implying a potential role in tumor progression (6). Moreover, the discovery of a chromosomal translocation resulting in a fusion between MECOM and CABCOCO1 in an acute myeloid leukemia patient further hints at a context‐dependent role in oncogenic processes (7). Overall, current evidence indicates that CABCOCO1 is a promising candidate gene whose genetic alterations and dysregulated expression may contribute to the pathogenesis of cardiovascular conditions and certain cancers, warranting further functional investigations.\n "}]}, {"type": "t", "text": "\n <ul>\n <li>"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "</li>\n <li>"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "</li>\n <li>"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "</li>\n <li>"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "</li>\n <li>"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": "</li>\n <li>"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": "</li>\n <li>"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": "</li>\n </ul>"}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Christopher Newton-Cheh, Toby Johnson, Vesela Gateva, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Genome-wide association study identifies eight loci associated with blood pressure."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Genet (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ng.361"}], "href": "https://doi.org/10.1038/ng.361"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19430483"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19430483"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Chen Liu, Huaixing Li, Qibin Qi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Common variants in or near FGF5, CYP17A1 and MTHFR genes are associated with blood pressure and hypertension in Chinese Hans."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Hypertens (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1097/HJH.0b013e32833f60ab"}], "href": "https://doi.org/10.1097/HJH.0b013e32833f60ab"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20852445"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20852445"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Jennifer E Ho, Daniel Levy, Lynda Rose, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Discovery and replication of novel blood pressure genetic loci in the Women's Genome Health Study."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Hypertens (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1097/HJH.0b013e3283406927"}], "href": "https://doi.org/10.1097/HJH.0b013e3283406927"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21045733"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21045733"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Soo Jin Yang, Seung-Tae Lee, Won Jun Kim, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Genetic variation in CYP17A1 is associated with arterial stiffness in diabetic subjects."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Exp Diabetes Res (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2012/827172"}], "href": "https://doi.org/10.1155/2012/827172"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23133444"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23133444"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Xiaowei Wu, Mary Sara McPeek "}, {"type": "b", "children": [{"type": "t", "text": "L-GATOR: Genetic Association Testing for a Longitudinally Measured Quantitative Trait in Samples with Related Individuals."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Hum Genet (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ajhg.2018.02.016"}], "href": "https://doi.org/10.1016/j.ajhg.2018.02.016"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29625022"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29625022"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Xiaoqi Liu, Zengqiang Wang, Meijiao Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of LTF as a Prognostic Biomarker for Osteosarcoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Oncol (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2022/4656661"}], "href": "https://doi.org/10.1155/2022/4656661"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35096061"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35096061"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Tereza Jancuskova, Radek Plachy, Lucie Zemankova, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Molecular characterization of the rare translocation t(3;10)(q26;q21) in an acute myeloid leukemia patient."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cytogenet (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/1755-8166-7-47"}], "href": "https://doi.org/10.1186/1755-8166-7-47"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25071866"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25071866"}]}]}]}
NCBI Gene ID 219621
API
Download Associations
Predicted Functions View CABCOCO1's ARCHS4 Predicted Functions.
Co-expressed Genes View CABCOCO1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View CABCOCO1's ARCHS4 Predicted Functions.

Functional Associations

CABCOCO1 has 1,426 functional associations with biological entities spanning 6 categories (functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 24 datasets.

Click the + buttons to view associations for CABCOCO1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles tissue samples with high or low expression of CABCOCO1 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset.
CellMarker Gene-Cell Type Associations cell types associated with CABCOCO1 gene from the CellMarker Gene-Cell Type Associations dataset.
CM4AI KOLF21J CRISPRi Gene Perturbation Atlas gene perturbations changing expression of CABCOCO1 gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset.
CM4AI U2OS Cell Map Protein Localization Assemblies assemblies containing CABCOCO1 protein from integrated AP-MS and IF data from the CM4AI U2OS Cell Map Protein Localization Assemblies dataset.
COMPARTMENTS Curated Protein Localization Evidence Scores 2025 cellular components containing CABCOCO1 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset.
COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 cellular components co-occuring with CABCOCO1 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset.
DISEASES Experimental Gene-Disease Association Evidence Scores 2025 diseases associated with CABCOCO1 gene in GWAS datasets from the DISEASES Experimental Gene-Disease Assocation Evidence Scores 2025 dataset.
DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 diseases co-occuring with CABCOCO1 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset.
GO Cellular Component Annotations 2025 cellular components containing CABCOCO1 protein from the curated GO Cellular Component Annotations 2025 dataset.
GO Molecular Function Annotations 2025 molecular functions performed by CABCOCO1 gene from the curated GO Molecular Function Annotations 2025 dataset.
GTEx eQTL 2025 SNPs regulating expression of CABCOCO1 gene from the GTEx eQTL 2025 dataset.
GTEx Tissue Gene Expression Profiles 2023 tissues with high or low expression of CABCOCO1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset.
GTEx Tissue-Specific Aging Signatures tissue samples with high or low expression of CABCOCO1 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset.
GWAS Catalog SNP-Phenotype Associations 2025 phenotypes associated with CABCOCO1 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset.
IMPC Knockout Mouse Phenotypes phenotypes of mice caused by CABCOCO1 gene knockout from the IMPC Knockout Mouse Phenotypes dataset.
JASPAR Predicted Human Transcription Factor Targets 2025 transcription factors regulating expression of CABCOCO1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.
JASPAR Predicted Mouse Transcription Factor Targets 2025 transcription factors regulating expression of CABCOCO1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset.
MoTrPAC Rat Endurance Exercise Training tissue samples with high or low expression of CABCOCO1 gene relative to other tissue samples from the MoTrPAC Rat Endurance Exercise Training dataset.
Rummagene Transcription Factor Associations 2026 transcription factors regulating expression of CABCOCO1 gene from the Rummagene Transcription Factor Associations 2026 dataset.
RummaGEO Drug Perturbation Signatures drug perturbations changing expression of CABCOCO1 gene from the RummaGEO Drug Perturbation Signatures dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of CABCOCO1 gene from the RummaGEO Gene Perturbation Signatures dataset.
TISSUES Curated Tissue Protein Expression Evidence Scores 2025 tissues with high expression of CABCOCO1 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 tissues with high expression of CABCOCO1 protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 tissues co-occuring with CABCOCO1 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset.