CADM2-AS2 Gene

Name CADM2 antisense RNA 2
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Although neither abstract explicitly details the function of CADM2‐AS2, the studies provide important context for understanding the broader CADM2 locus. CADM2 is robustly associated with a range of behavioural and metabolic traits—including physical activity, risk‐taking, substance use, mood instability, and obesity—as well as a shared genetic risk between psychiatric and cardiometabolic disorders."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In a large, genome‐wide analysis, genetic variation in CADM2 was linked with risk‐taking behaviour—a trait that is interrelated with other psychiatric conditions such as schizophrenia, bipolar disorder, and attention‐deficit hyperactivity disorder."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n "}, {"type": "p", "children": [{"type": "t", "text": "\n CADM2‐AS2, as an antisense transcript at the CADM2 locus, is likely to play a regulatory role in controlling CADM2 expression, and thereby modulate these diverse cognitive, executive, metabolic, and psychiatric phenotypes. Given that antisense RNAs often fine‐tune the expression of their sense counterparts, CADM2‐AS2 may contribute to the molecular mechanisms that underlie the associations observed across these physical and mental health traits. Future experimental work will be essential to directly ascertain how CADM2‐AS2 influences CADM2 gene regulation and the resultant phenotypic outcomes.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Julia Morris, Mark E S Bailey, Damiano Baldassarre, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Genetic variation in CADM2 as a link between psychological traits and obesity."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41598-019-43861-9"}], "href": "https://doi.org/10.1038/s41598-019-43861-9"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31089183"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31089183"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Rona J Strawbridge, Joey Ward, Breda Cullen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Genome-wide analysis of self-reported risk-taking behaviour and cross-disorder genetic correlations in the UK Biobank cohort."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Transl Psychiatry (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41398-017-0079-1"}], "href": "https://doi.org/10.1038/s41398-017-0079-1"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29391395"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29391395"}]}]}]}
NCBI Gene ID 100874037
API
Download Associations
Predicted Functions View CADM2-AS2's ARCHS4 Predicted Functions.
Co-expressed Genes View CADM2-AS2's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View CADM2-AS2's ARCHS4 Predicted Functions.

Functional Associations

CADM2-AS2 has 158 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 5 datasets.

Click the + buttons to view associations for CADM2-AS2 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of CADM2-AS2 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of CADM2-AS2 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of CADM2-AS2 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of CADM2-AS2 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of CADM2-AS2 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.