CADM3-AS1 Gene

Name CADM3 antisense RNA 1
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Recent multi‐cancer studies have revealed that CADM3‑AS1, a long noncoding RNA, is aberrantly expressed in several tumor types and may contribute to cancer development and progression. In bladder cancer, large‐scale profiling of lncRNAs demonstrated pronounced dysregulation of many transcripts, with those like CADM3‑AS1 being potentially involved in key regulatory networks—such as the p53 signaling and cell cycle pathways—that affect the expression of protein‐coding genes (also linked to propanoate metabolism) and thereby promote tumorigenesis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " Similarly, in breast cancer, inclusion of CADM3‑AS1 in a multi‑lncRNA signature was associated with patient survival, indicating that its expression may help stratify patients into prognostically distinct groups."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": " Furthermore, integrative analyses across diverse cancer types have identified CADM3‑AS1 as one of several lncRNAs under selective pressure with significant associations with mortality risk, underscoring its potential functional role in neoplasia."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " In lung adenocarcinoma, CADM3‑AS1 appears among newly identified prognostic markers that may be linked to cancer‐related biological processes, further supporting its potential as a biomarker and a candidate therapeutic target."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Yi-Ping Zhu, Xiao-Jie Bian, Ding-Wei Ye, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long noncoding RNA expression signatures of bladder cancer revealed by microarray."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncol Lett (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/ol.2014.1843"}], "href": "https://doi.org/10.3892/ol.2014.1843"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24944692"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24944692"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Caterina Gulìa, Stefano Baldassarra, Fabrizio Signore, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Role of Non-Coding RNAs in the Etiology of Bladder Cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genes (Basel) (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/genes8110339"}], "href": "https://doi.org/10.3390/genes8110339"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29165379"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29165379"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Jianing Tang, Jiangbo Ren, Qiuxia Cui, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A prognostic 10-lncRNA expression signature for predicting the risk of tumour recurrence in breast cancer patients."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Mol Med (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/jcmm.14556"}], "href": "https://doi.org/10.1111/jcmm.14556"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31429520"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31429520"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Matthew Ung, Evelien Schaafsma, Daniel Mattox, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Pan-cancer systematic identification of lncRNAs associated with cancer prognosis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PeerJ (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.7717/peerj.8797"}], "href": "https://doi.org/10.7717/peerj.8797"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32231885"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32231885"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Abbas Salavaty, Zahra Rezvani, Ali Najafi "}, {"type": "b", "children": [{"type": "t", "text": "Survival analysis and functional annotation of long non-coding RNAs in lung adenocarcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Mol Med (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/jcmm.14458"}], "href": "https://doi.org/10.1111/jcmm.14458"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31211495"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31211495"}]}]}]}
NCBI Gene ID 100131825
API
Download Associations
Predicted Functions View CADM3-AS1's ARCHS4 Predicted Functions.
Co-expressed Genes View CADM3-AS1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View CADM3-AS1's ARCHS4 Predicted Functions.

Functional Associations

CADM3-AS1 has 528 functional associations with biological entities spanning 3 categories (chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 5 datasets.

Click the + buttons to view associations for CADM3-AS1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq tissue samples with high or low expression of CADM3-AS1 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of CADM3-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of CADM3-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of CADM3-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
LINCS L1000 CMAP Chemical Perturbation Consensus Signatures small molecule perturbations changing expression of CADM3-AS1 gene from the LINCS L1000 CMAP Chemical Perturbations Consensus Signatures dataset.