| Name | coiled-coil domain containing 197 |
| Description | Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nRASAL3 is a Ras GTPase-activating protein that plays an essential role in fineātuning Ras/Erk signaling across various immune cell types. In NKT cells, for example, RASAL3 limits Ras activation so that its deficiency leads to hyperphosphorylation of Erk and altered cytokine production upon stimulus, thereby affecting cell expansion and function in the liver."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn T cells, RASAL3 is critical for maintaining peripheral T cell homeostasis. Although thymic development remains intact in its absence, RASAL3 deficiency impairs the survival of naive T cells, resulting in reduced T cell numbers and increased apoptosis. In addition, even activated T cells rely on RASAL3 to control cell death, as diminished Bcl2 expression and altered inflammatory responses are observed without proper Ras regulation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its role in lymphocytes, RASAL3 serves as a key negative regulator of the Ras pathway in innate immune cells as well. In neutrophils, RASAL3 expression is upregulated following inflammatory stimuli to mitigate excessive activation and prevent hyperinflammatory responses that can lead to organ damage and increased mortality during septic shock."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " Moreover, within dendritic cells, RASAL3 interacts physically and functionally with the scaffold protein CCDC88B and the guanine nucleotide exchange factor ARHGEF2. This complex modulates RHOA activation and, in doing so, differentially regulates cellular migration, which is crucial for effective immune surveillance and responses."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Suguru Saito, Toshihiko Kawamura, Masaya Higuchi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "RASAL3, a novel hematopoietic RasGAP protein, regulates the number and functions of NKT cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur J Immunol (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/eji.201444977"}], "href": "https://doi.org/10.1002/eji.201444977"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25652366"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25652366"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Ryunosuke Muro, Takeshi Nitta, Toshiyuki Okada, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The Ras GTPase-activating protein Rasal3 supports survival of naive T cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0119898"}], "href": "https://doi.org/10.1371/journal.pone.0119898"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25793935"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25793935"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Ryunosuke Muro, Takeshi Nitta, Masayuki Kitajima, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Rasal3-mediated T cell survival is essential for inflammatory responses."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2017.12.159"}], "href": "https://doi.org/10.1016/j.bbrc.2017.12.159"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29291408"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29291408"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Suguru Saito, Duo-Yao Cao, Aaron R Victor, et al. "}, {"type": "b", "children": [{"type": "t", "text": "RASAL3 Is a Putative RasGAP Modulating Inflammatory Response by Neutrophils."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Immunol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fimmu.2021.744300"}], "href": "https://doi.org/10.3389/fimmu.2021.744300"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34777356"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34777356"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Jean-Frederic Olivier, David Langlais, Thiviya Jeyakumar, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CCDC88B interacts with RASAL3 and ARHGEF2 and regulates dendritic cell function in neuroinflammation and colitis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Commun Biol (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s42003-023-05751-9"}], "href": "https://doi.org/10.1038/s42003-023-05751-9"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38200184"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38200184"}]}]}]}
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| NCBI Gene ID | 256369 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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CCDC197 has 428 functional associations with biological entities spanning 5 categories (disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 12 datasets.
Click the + buttons to view associations for CCDC197 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of CCDC197 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset. | |
| CM4AI KOLF21J CRISPRi Gene Perturbation Atlas | gene perturbations changing expression of CCDC197 gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset. | |
| DISEASES Experimental Gene-Disease Association Evidence Scores 2025 | diseases associated with CCDC197 gene in GWAS datasets from the DISEASES Experimental Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 | diseases co-occuring with CCDC197 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| GTEx eQTL 2025 | SNPs regulating expression of CCDC197 gene from the GTEx eQTL 2025 dataset. | |
| GTEx Tissue Gene Expression Profiles 2023 | tissues with high or low expression of CCDC197 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset. | |
| GWAS Catalog SNP-Phenotype Associations 2025 | phenotypes associated with CCDC197 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of CCDC197 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| Rummagene Transcription Factor Associations 2026 | transcription factors regulating expression of CCDC197 gene from the Rummagene Transcription Factor Associations 2026 dataset. | |
| RummaGEO Drug Perturbation Signatures | drug perturbations changing expression of CCDC197 gene from the RummaGEO Drug Perturbation Signatures dataset. | |
| RummaGEO Gene Perturbation Signatures | gene perturbations changing expression of CCDC197 gene from the RummaGEO Gene Perturbation Signatures dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 | tissues co-occuring with CCDC197 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset. | |