| HGNC Family | Non-coding RNAs |
| Name | CDR1 antisense RNA |
| Description | This gene represents naturally-occurring RNAs transcribed in antisense to CDR1 (cerebellar degeneration-related protein 1, 34kDa; GeneID:1038), some of which may be circular rather than linear. The circular RNA produced by this locus acts as an miRNA sponge, preventing the miRNA from interacting with target transcripts. No RefSeq transcript is created for the circular RNA. [provided by RefSeq, Feb 2024] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Circular RNA CDR1-AS (also known as ciRS-7) is an abundantly expressed, regulatory noncoding RNA that primarily exerts its function as a microRNA sponge, thereby modulating gene expression in diverse cellular contexts. In pancreatic islet cells, CDR1-AS sequesters miR-7 to relieve its inhibitory effects on targets such as Myrip and Pax6, leading to enhanced insulin secretion and improved β‐cell function."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In cardiomyocytes, increased CDR1-AS levels exacerbate myocardial infarction–induced apoptosis by sponging miR-7a, which in turn alters the expression of apoptotic mediators PARP and SP1."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Moreover, in periodontal ligament stem cells, CDR1-AS upregulation during osteogenic differentiation impedes miR-7 activity, thereby de-repressing growth differentiation factor 5 and promoting downstream Smad1/5/8 and p38 MAPK signaling essential for bone formation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n In the oncologic setting, aberrant expression of CDR1-AS has been linked to tumor progression in several cancer types. For instance, in esophageal squamous cell carcinoma, CDR1-AS functions as a miRNA sponge for miR-876-5p to elevate MAGE-A family oncogene expression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " In bladder cancer, CDR1-AS enhances cisplatin chemosensitivity by binding miR-1270, which leads to upregulation of the pro-apoptotic factor APAF1."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": " Similarly, elevated levels of CDR1-AS in triple-negative breast cancer have been associated with increased cell migration and invasion, and in 5‑fluorouracil–resistant breast cancer, CDR1-AS modulates the miR-7/CCNE1 axis to affect chemoresponsiveness."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": " In laryngeal squamous cell carcinoma, high CDR1-AS acts as a competing endogenous RNA to sequester miR-7, resulting in upregulation of oncogenes such as CCNE1 and PIK3CD and thereby promoting tumor progression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Additionally, in glioblastoma, deregulation of the miR-671-5p/CDR1-AS axis affects the expression of CDR1 and VSNL1, further implicating CDR1-AS in the modulation of tumor cell behavior."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": " Notably, spatial expression studies in colon cancer reveal that CDR1-AS is absent from malignant epithelial cells yet highly expressed in the tumor stroma, highlighting a context-specific expression pattern and suggesting that its role as a microRNA sponge may be restricted to certain cellular compartments within the tumor microenvironment."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "10"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Collectively, these studies underscore the multifaceted role of CDR1-AS as a microRNA sponge that modulates crucial signaling pathways involved in metabolic regulation, cardiac injury, osteogenesis, and cancer progression. The context-dependent functions of CDR1-AS not only illustrate its importance in normal physiology but also reveal its potential as a therapeutic target across a spectrum of human diseases.\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Huanyu Xu, Sen Guo, Wei Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The circular RNA Cdr1as, via miR-7 and its targets, regulates insulin transcription and secretion in islet cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/srep12453"}], "href": "https://doi.org/10.1038/srep12453"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26211738"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26211738"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Hai-Hua Geng, Rui Li, Ya-Min Su, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The Circular RNA Cdr1as Promotes Myocardial Infarction by Mediating the Regulation of miR-7a on Its Target Genes Expression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0151753"}], "href": "https://doi.org/10.1371/journal.pone.0151753"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26998750"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26998750"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Xiaobei Li, Yunfei Zheng, Yan Zheng, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Circular RNA CDR1as regulates osteoblastic differentiation of periodontal ligament stem cells via the miR-7/GDF5/SMAD and p38 MAPK signaling pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Stem Cell Res Ther (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s13287-018-0976-0"}], "href": "https://doi.org/10.1186/s13287-018-0976-0"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30170617"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30170617"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Meixiang Sang, Lingjiao Meng, Yang Sang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Circular RNA ciRS-7 accelerates ESCC progression through acting as a miR-876-5p sponge to enhance MAGE-A family expression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Lett (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.canlet.2018.03.049"}], "href": "https://doi.org/10.1016/j.canlet.2018.03.049"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29635069"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29635069"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Wenbo Yuan, Rui Zhou, Jingzi Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Circular RNA Cdr1as sensitizes bladder cancer to cisplatin by upregulating APAF1 expression through miR-1270 inhibition."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Oncol (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/1878-0261.12523"}], "href": "https://doi.org/10.1002/1878-0261.12523"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31131537"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31131537"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Meixiang Sang, Lingjiao Meng, Sihua Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Circular RNA ciRS-7 Maintains Metastatic Phenotypes as a ceRNA of miR-1299 to Target MMPs."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cancer Res (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1158/1541-7786.MCR-18-0284"}], "href": "https://doi.org/10.1158/1541-7786.MCR-18-0284"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30072582"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30072582"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Wei Yang, Juan Gu, Xuedong Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Inhibition of circular RNA CDR1as increases chemosensitivity of 5-FU-resistant BC cells through up-regulating miR-7."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Mol Med (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/jcmm.14171"}], "href": "https://doi.org/10.1111/jcmm.14171"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30884120"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30884120"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Jianzhong Zhang, Huayong Hu, Yaoxin Zhao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CDR1as is overexpressed in laryngeal squamous cell carcinoma to promote the tumour's progression via miR-7 signals."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Prolif (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/cpr.12521"}], "href": "https://doi.org/10.1111/cpr.12521"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30182381"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30182381"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Davide Barbagallo, Angelo Condorelli, Marco Ragusa, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Dysregulated miR-671-5p / CDR1-AS / CDR1 / VSNL1 axis is involved in glioblastoma multiforme."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncotarget (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/oncotarget.6621"}], "href": "https://doi.org/10.18632/oncotarget.6621"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26683098"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26683098"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Lasse S Kristensen, Karoline K Ebbesen, Martin Sokol, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Spatial expression analyses of the putative oncogene ciRS-7 in cancer reshape the microRNA sponge theory."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41467-020-18355-2"}], "href": "https://doi.org/10.1038/s41467-020-18355-2"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32917870"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32917870"}]}]}]}
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| Synonyms | CDR1AS, CIRS-7, CDR1NAT |
| NCBI Gene ID | 103611090 |
| API | |
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| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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CDR1-AS has 1 functional associations with biological entities spanning 1 categories (gene, protein or microRNA) extracted from 1 datasets.
Click the + buttons to view associations for CDR1-AS from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of CDR1-AS gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |