CFAP299 Gene

Name cilia and flagella associated protein 299
Description Predicted to be located in cytoplasm. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n A novel gene, C4orf22 (also known as 1700007G11Rik or CFAP299), was recently characterized in mouse testis, where its encoded 233–amino acid protein appears to play an important role in early spermatogenesis. Expression analysis revealed that CFAP299 mRNA is predominantly found in the testis and increases during postnatal development, with immunohistochemical studies showing localization mainly in the cytoplasm of spermatogonia and primary spermatocytes. Functional studies in GC‐1 cells demonstrated that overexpression of CFAP299 reduces apoptosis and promotes progression of the cell cycle—evidenced by an increase in the proportion of cells in S and G2 phases—while siRNA‐mediated knockdown leads to enhanced apoptosis and cell cycle arrest at the G2/M transition. This modulation of cell fate is accompanied by upregulation of the anti‐apoptotic protein Bcl‑2 and downregulation of key apoptotic markers, including caspase‑3, caspase‑8, and Bax, indicating that CFAP299 may exert its function through a Bcl‑2–mediated regulatory pathway. Collectively, these findings suggest that CFAP299 is a critical regulator of germ cell survival and cell cycle progression during spermatogenesis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Hui Li, Yanfa Dai, Zhongqin Luo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Cloning of a new testis-enriched gene C4orf22 and its role in cell cycle and apoptosis in mouse spermatogenic cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Biol Rep (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s11033-019-04651-8"}], "href": "https://doi.org/10.1007/s11033-019-04651-8"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30820741"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30820741"}]}]}]}
NCBI Gene ID 255119
API
Download Associations
Predicted Functions View CFAP299's ARCHS4 Predicted Functions.
Co-expressed Genes View CFAP299's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View CFAP299's ARCHS4 Predicted Functions.

Functional Associations

CFAP299 has 1,509 functional associations with biological entities spanning 6 categories (functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 22 datasets.

Click the + buttons to view associations for CFAP299 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles tissue samples with high or low expression of CFAP299 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset.
CellMarker Gene-Cell Type Associations cell types associated with CFAP299 gene from the CellMarker Gene-Cell Type Associations dataset.
CM4AI KOLF21J CRISPRi Gene Perturbation Atlas gene perturbations changing expression of CFAP299 gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset.
COMPARTMENTS Experimental Protein Localization Evidence Scores 2025 cellular components containing CFAP299 protein in low- or high-throughput protein localization assays from the COMPARTMENTS Experimental Protein Localization Evidence Scores 2025 dataset.
COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 cellular components co-occuring with CFAP299 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset.
DISEASES Experimental Gene-Disease Association Evidence Scores 2025 diseases associated with CFAP299 gene in GWAS datasets from the DISEASES Experimental Gene-Disease Assocation Evidence Scores 2025 dataset.
DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 diseases co-occuring with CFAP299 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset.
GTEx eQTL 2025 SNPs regulating expression of CFAP299 gene from the GTEx eQTL 2025 dataset.
GTEx Tissue Gene Expression Profiles 2023 tissues with high or low expression of CFAP299 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset.
GWAS Catalog SNP-Phenotype Associations 2025 phenotypes associated with CFAP299 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset.
HuBMAP ASCT+B Annotations cell types associated with CFAP299 gene from the HuBMAP ASCT+B dataset.
HuBMAP ASCT+B Augmented with RNA-seq Coexpression cell types associated with CFAP299 gene from the HuBMAP ASCT+B Augmented with RNA-seq Coexpression dataset.
JASPAR Predicted Human Transcription Factor Targets 2025 transcription factors regulating expression of CFAP299 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.
JASPAR Predicted Mouse Transcription Factor Targets 2025 transcription factors regulating expression of CFAP299 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset.
Rummagene Transcription Factor Associations 2026 transcription factors regulating expression of CFAP299 gene from the Rummagene Transcription Factor Associations 2026 dataset.
RummaGEO Drug Perturbation Signatures drug perturbations changing expression of CFAP299 gene from the RummaGEO Drug Perturbation Signatures dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of CFAP299 gene from the RummaGEO Gene Perturbation Signatures dataset.
Sci-Plex Drug Perturbation Signatures drug perturbations changing expression of CFAP299 gene from the Sci-Plex Drug Perturbation Signatures dataset.
Tahoe Therapeutics Tahoe 100M Perturbation Atlas drug perturbations changing expression of CFAP299 gene from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
TISSUES Curated Tissue Protein Expression Evidence Scores 2025 tissues with high expression of CFAP299 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 tissues with high expression of CFAP299 protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 tissues co-occuring with CFAP299 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset.