CFAP95 Gene

Name cilia and flagella associated protein 95
Description Predicted to be involved in flagellated sperm motility. Located in axonemal microtubule and plasma membrane. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\n Recent studies have begun to shed light on the role of CFAP95—also known by its alternative gene name C9ORF135—in human stem cell biology and cancer. In undifferentiated human embryonic stem cells (hESCs), CFAP95 encodes a membrane‐associated protein whose expression is tightly regulated by pluripotency factors such as OCT4 and SOX2. Notably, its expression is robust in undifferentiated hESCs and is sharply downregulated during gastrulation and gametogenesis, suggesting that CFAP95 may serve as a surface marker for the stem cell state and could play a role in maintaining cell architecture through its interactions with cytoskeletal effectors like non‐muscle myosin IIA and IIB."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n In addition to its function in early developmental processes, CFAP95 has emerged as a candidate biomarker in cancer. For instance, in clear cell renal cell carcinoma, CFAP95 (among other genes) was identified as being significantly related to patient prognosis, suggesting that changes in its expression may reflect underlying alterations in tumor biology."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Moreover, differential co-expression analyses in lung cancer have revealed CFAP95 as part of gene pairs whose altered correlation patterns may underlie aspects of tumor development and cell adhesion dynamics."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n "}]}, {"type": "t", "text": "\n \n "}, {"type": "p", "children": [{"type": "t", "text": "\n Collectively, these findings indicate that CFAP95/C9ORF135 is not only a marker of pluripotency in hESCs—with potential roles in cellular adhesion and cytoskeletal organization—but also may contribute to cancer progression and serve as a prognostic indicator in certain tumor types."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}, {"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n "}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Shixin Zhou, Yinan Liu, Yumin Ma, et al. "}, {"type": "b", "children": [{"type": "t", "text": "C9ORF135 encodes a membrane protein whose expression is related to pluripotency in human embryonic stem cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/srep45311"}], "href": "https://doi.org/10.1038/srep45311"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28345668"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28345668"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Zedan Zhang, Enyu Lin, Hongkai Zhuang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Construction of a novel gene-based model for prognosis prediction of clear cell renal cell carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Cell Int (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12935-020-1113-6"}], "href": "https://doi.org/10.1186/s12935-020-1113-6"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32002016"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32002016"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Xiu Lan, Weilong Lin, Yufen Xu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The detection and analysis of differential regulatory communities in lung cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genomics (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ygeno.2020.02.005"}], "href": "https://doi.org/10.1016/j.ygeno.2020.02.005"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32045668"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32045668"}]}]}]}
NCBI Gene ID 138255
API
Download Associations
Predicted Functions View CFAP95's ARCHS4 Predicted Functions.
Co-expressed Genes View CFAP95's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View CFAP95's ARCHS4 Predicted Functions.

Functional Associations

CFAP95 has 503 functional associations with biological entities spanning 6 categories (functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 12 datasets.

Click the + buttons to view associations for CFAP95 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles tissue samples with high or low expression of CFAP95 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset.
CellMarker Gene-Cell Type Associations cell types associated with CFAP95 gene from the CellMarker Gene-Cell Type Associations dataset.
CM4AI KOLF21J CRISPRi Gene Perturbation Atlas gene perturbations changing expression of CFAP95 gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset.
GO Cellular Component Annotations 2025 cellular components containing CFAP95 protein from the curated GO Cellular Component Annotations 2025 dataset.
GTEx eQTL 2025 SNPs regulating expression of CFAP95 gene from the GTEx eQTL 2025 dataset.
GTEx Tissue Gene Expression Profiles 2023 tissues with high or low expression of CFAP95 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset.
GWAS Catalog SNP-Phenotype Associations 2025 phenotypes associated with CFAP95 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset.
JASPAR Predicted Human Transcription Factor Targets 2025 transcription factors regulating expression of CFAP95 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.
JASPAR Predicted Mouse Transcription Factor Targets 2025 transcription factors regulating expression of CFAP95 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset.
Rummagene Transcription Factor Associations 2026 transcription factors regulating expression of CFAP95 gene from the Rummagene Transcription Factor Associations 2026 dataset.
RummaGEO Drug Perturbation Signatures drug perturbations changing expression of CFAP95 gene from the RummaGEO Drug Perturbation Signatures dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of CFAP95 gene from the RummaGEO Gene Perturbation Signatures dataset.