CHD9NB Gene

Name CHD9 neighbor
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nGas7, a multifaceted growth arrest‐specific protein, plays versatile roles in cell differentiation and oncogenic transformation. In hematopoietic cells, its deregulation—exemplified by fusion with the MLL gene—modulates progenitor homeostasis and influences leukemic disease latency and phenotype without being strictly required for transformation. In early embryonic stages, high Gas7 expression gives way to a dorsal restriction during neurulation, underscoring its participation in neuronal differentiation and migration, a disruption of which has been implicated in neurodevelopmental disorders such as schizophrenia."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "3"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn the nervous system, Gas7 is critical for neuritogenesis and cytoskeletal organization. Overexpression in PC12 and primary neuronal cells promotes early morphological differentiation and stimulates NGF‐mediated neurite outgrowth, while its inhibition impairs the formation of neurite-like processes. Mechanistically, Gas7 interacts directly with N-WASP through unique WW-Pro domain interfaces to recruit the Arp2/3 complex for actin polymerization"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": ", and it binds Tau via its WW motif to facilitate microtubule assembly by stabilizing sheet intermediates."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": " In addition, Gas7 drives morphological differentiation in PC12 cells, contributing to the early events that precede and potentiate NGF-induced neuronal maturation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its roles in differentiation, Gas7 also regulates cell survival and immune functions. The Gas7b isoform, for instance, sensitizes neuroblastoma cells to apoptotic stimuli, while its depletion confers resistance to cell death under stress conditions."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": " In parallel, in macrophages Gas7 forms distinctive two-dimensional, sheet-like assemblies via its F-BAR domain that are indispensable for phagocytic cup formation during microbial internalization."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "10"}]}, {"type": "t", "text": " Furthermore, its induction in M1-polarized alveolar macrophages is regulated by NF-κB signaling and is linked to the expression of key pro-inflammatory genes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "11"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Chi Wai So, Holger Karsunky, Piu Wong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Leukemic transformation of hematopoietic progenitors by MLL-GAS7 in the absence of Hoxa7 or Hoxa9."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Blood (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1182/blood-2003-10-3722"}], "href": "https://doi.org/10.1182/blood-2003-10-3722"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15070702"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15070702"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "P P Moorthy, A Anand Kumar, H Devaraj "}, {"type": "b", "children": [{"type": "t", "text": "Expression of the Gas7 gene and Oct4 in embryonic stem cells of mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Stem Cells Dev (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1089/scd.2005.14.664"}], "href": "https://doi.org/10.1089/scd.2005.14.664"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16433621"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16433621"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Zhengrong Zhang, Fanfan Zheng, Yang You, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Growth arrest specific gene 7 is associated with schizophrenia and regulates neuronal migration and morphogenesis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Brain (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s13041-016-0238-y"}], "href": "https://doi.org/10.1186/s13041-016-0238-y"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27189492"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27189492"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Jhong-Jhe You, Sue Lin-Chao "}, {"type": "b", "children": [{"type": "t", "text": "Gas7 functions with N-WASP to regulate the neurite outgrowth of hippocampal neurons."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M109.051094"}], "href": "https://doi.org/10.1074/jbc.M109.051094"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20150425"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20150425"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Takafumi Uchida, Hirotada Akiyama, Wataru Sakamoto, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Direct optical microscopic observation of the microtubule polymerization intermediate sheet structure in the presence of gas7."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Mol Biol (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.jmb.2009.06.081"}], "href": "https://doi.org/10.1016/j.jmb.2009.06.081"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19580814"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19580814"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Hirotada Akiyama, Aina Gotoh, Ryong-Woon Shin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A novel role for hGas7b in microtubular maintenance: possible implication in tau-associated pathology in Alzheimer disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M109.035998"}], "href": "https://doi.org/10.1074/jbc.M109.035998"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19801671"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19801671"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Chuck C-K Chao, L-J Su, N-K Sun, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Involvement of Gas7 in nerve growth factor-independent and dependent cell processes in PC12 cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurosci Res (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jnr.10763"}], "href": "https://doi.org/10.1002/jnr.10763"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "14515354"}], "href": "https://pubmed.ncbi.nlm.nih.gov/14515354"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Karine Lortie, Deqi Huang, Balu Chakravarthy, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The gas7 protein potentiates NGF-mediated differentiation of PC12 cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Brain Res (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.brainres.2004.12.024"}], "href": "https://doi.org/10.1016/j.brainres.2004.12.024"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15725398"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15725398"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Feng-Chun Hung, Chuck C-K Chao "}, {"type": "b", "children": [{"type": "t", "text": "Knockdown of growth-arrest-specific gene 7b (gas7b) using short-hairpin RNA desensitizes neuroblastoma cells to cisplatin: Implications for preventing apoptosis of neurons."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurosci Res (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jnr.22504"}], "href": "https://doi.org/10.1002/jnr.22504"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20890993"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20890993"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Kyoko Hanawa-Suetsugu, Yuzuru Itoh, Maisarah Ab Fatah, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Phagocytosis is mediated by two-dimensional assemblies of the F-BAR protein GAS7."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41467-019-12738-w"}], "href": "https://doi.org/10.1038/s41467-019-12738-w"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31628328"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31628328"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Qian Xu, Xiaofan Liu, Xinyuan Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Growth arrest-specific protein 7 regulates the murine M1 alveolar macrophage polarization."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Immunol Res (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s12026-017-8948-5"}], "href": "https://doi.org/10.1007/s12026-017-8948-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28895026"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28895026"}]}]}]}
NCBI Gene ID 105371267
API
Download Associations
Predicted Functions View CHD9NB's ARCHS4 Predicted Functions.
Co-expressed Genes View CHD9NB's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View CHD9NB's ARCHS4 Predicted Functions.

Functional Associations

CHD9NB has 376 functional associations with biological entities spanning 3 categories (chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 6 datasets.

Click the + buttons to view associations for CHD9NB from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Carcinogenome Chemical Perturbation Carcinogenicity Signatures small molecule perturbations changing expression of CHD9NB gene from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.
CM4AI KOLF21J CRISPRi Gene Perturbation Atlas gene perturbations changing expression of CHD9NB gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset.
GTEx Tissue-Specific Aging Signatures tissue samples with high or low expression of CHD9NB gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset.
JASPAR Predicted Human Transcription Factor Targets 2025 transcription factors regulating expression of CHD9NB gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.
JASPAR Predicted Mouse Transcription Factor Targets 2025 transcription factors regulating expression of CHD9NB gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset.
Rummagene Transcription Factor Associations 2026 transcription factors regulating expression of CHD9NB gene from the Rummagene Transcription Factor Associations 2026 dataset.